AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1109980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1109980 MtrunA17_Chr7g0244391 96.544 1389 9 4 1 1370 1 1369 0.0 2742
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1109980 AT3G08850.1 71.286 1400 316 14 1 1370 1 1344 0.0 1958
Msa1109980 AT5G01770.3 67.287 1397 360 17 1 1368 1 1329 0.0 1874
Msa1109980 AT5G01770.5 67.072 1397 360 17 1 1368 1 1326 0.0 1867
Msa1109980 AT5G01770.4 66.667 1401 361 19 1 1368 1 1328 0.0 1849
Msa1109980 AT5G01770.1 66.004 1409 362 20 1 1368 1 1333 0.0 1829
Msa1109980 AT5G01770.2 66.640 1259 324 16 1 1230 1 1192 0.0 1668

Find 420 sgRNAs with CRISPR-Local

Find 1040 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTGTTCAATACCTATTA+TGG 0.192217 7_3:+54466558 None:intergenic
AATGGCATTGGGAGATTTAA+TGG 0.197293 7_3:-54476842 Msa1109980:CDS
CCTAGGAAGATTTCTTGATA+TGG 0.207454 7_3:-54469176 Msa1109980:CDS
CATCGCAATGCCATCTTTAT+AGG 0.207777 7_3:+54471364 None:intergenic
TAACAAATCCAATTGCTAAA+TGG 0.211767 7_3:-54465877 Msa1109980:CDS
AGTAGTAGTGTAGGTGTTTA+TGG 0.211967 7_3:-54476634 Msa1109980:CDS
GTCTTGCTCGCTCGTCTTCT+TGG 0.215061 7_3:-54466477 Msa1109980:CDS
GACACTTTCTTTACCTTTCC+AGG 0.215139 7_3:+54463658 None:intergenic
TCCTCTCATCATTCTGATTC+AGG 0.222789 7_3:-54466733 Msa1109980:CDS
CACCTCAAATTGGTCCTCTA+AGG 0.229617 7_3:-54466858 Msa1109980:CDS
TCAATGGCTTTGCTTGTGTC+TGG 0.233376 7_3:-54467899 Msa1109980:CDS
CTCTTCTTGGTGAATTGAAT+TGG 0.235617 7_3:-54470650 Msa1109980:CDS
GGATCCTAATGCAGAATTTC+AGG 0.240456 7_3:-54470162 Msa1109980:intron
GCAGAACCACTGGCAATAAT+TGG 0.242444 7_3:+54463409 None:intergenic
AACCGAGGTGCTTACATTTC+AGG 0.246089 7_3:+54464045 None:intergenic
TGCTTACATTTCAGGTGTTC+TGG 0.267073 7_3:+54464053 None:intergenic
CAGCTTCAATACAAGCTTCT+TGG 0.268575 7_3:+54467995 None:intergenic
ATCGGAGCCGTCATCGTTTA+AGG 0.268792 7_3:+54476708 None:intergenic
ACTCTAATGGCCCAGAAAAT+TGG 0.270072 7_3:-54463322 Msa1109980:CDS
GCGCTAGCACGCTTTGCTTT+TGG 0.271154 7_3:-54467033 Msa1109980:CDS
CTCAATCAAGTATATATAAT+TGG 0.274920 7_3:-54466123 Msa1109980:CDS
TTCTGCCAAACAACTCATTA+AGG 0.287276 7_3:-54463392 Msa1109980:CDS
AATGACCGAAAGACTCTTCT+TGG 0.295203 7_3:-54470663 Msa1109980:CDS
ATGCAGCAGCAATAGATTTC+AGG 0.298826 7_3:+54466998 None:intergenic
ATTACCTGAAATTCTGCATT+AGG 0.302483 7_3:+54470158 None:intergenic
TTCTGTGGTGCCATAGAAAA+AGG 0.305645 7_3:+54473467 None:intergenic
CAGCCTTGAGGGTGATCAAC+TGG 0.308638 7_3:-54463365 Msa1109980:CDS
AGAAGAGTCTTTCGGTCATT+TGG 0.313465 7_3:+54470666 None:intergenic
CGCATTCCAGCTATGTAACT+TGG 0.314337 7_3:+54466250 None:intergenic
GATTTCTTATATCAAGGAAT+TGG 0.315223 7_3:+54463503 None:intergenic
AGTATTGTTTCACCTCAAAT+TGG 0.322087 7_3:-54466868 Msa1109980:CDS
AGTTGTGAATGCCTTCATTC+AGG 0.322171 7_3:-54471647 Msa1109980:intron
AATTGCTAAATGGGACATAA+AGG 0.325526 7_3:-54465867 Msa1109980:CDS
AGCAGTCCTCTCGCTAGTTC+TGG 0.326336 7_3:-54466787 Msa1109980:CDS
AGTTAACAGCATTTGAAGTT+TGG 0.329988 7_3:-54469976 Msa1109980:CDS
GCTGAGGCTGAAGCTGATGC+AGG 0.331134 7_3:+54476736 None:intergenic
ATGGGAATTGGCTTTCAGCC+TGG 0.333086 7_3:-54463688 Msa1109980:CDS
AATGGAGTGGTTAACAGCTT+TGG 0.337639 7_3:-54466688 Msa1109980:CDS
ATTGGTAGGGGTAAATTATC+TGG 0.338526 7_3:-54463045 Msa1109980:three_prime_UTR
TGCAGCAGTTAAAAGTGATT+TGG 0.338549 7_3:+54466084 None:intergenic
GCAGCAAGTAGTAATTGATA+TGG 0.341794 7_3:+54463274 None:intergenic
GGGCCCATGGGCTGTGGATC+TGG 0.344656 7_3:-54469155 Msa1109980:intron
GAGTATGTTCATTGGAGTTT+AGG 0.345768 7_3:-54466225 Msa1109980:CDS
GACAGATTCTTGTATTCATA+TGG 0.349114 7_3:-54468967 Msa1109980:CDS
TGTTCCTAACCGGCGTGATT+CGG 0.349273 7_3:-54476674 Msa1109980:CDS
CTGCAGGGATGCGTGGGATA+TGG 0.349280 7_3:-54470225 Msa1109980:intron
GCAGCCATTGCACGTTGCTC+TGG 0.349802 7_3:+54468057 None:intergenic
ACTGCATTCTCTTCAATTCA+TGG 0.349958 7_3:-54465100 Msa1109980:CDS
GCAGCAGCAATGCGGCTATC+TGG 0.352596 7_3:-54465035 Msa1109980:intron
GGGGAAAATAATCGGTTTGC+AGG 0.352788 7_3:-54467851 Msa1109980:CDS
GTGCCAAAGCCAACACATAA+TGG 0.353218 7_3:-54473189 Msa1109980:CDS
GAATGAAAGATCCCGTTTAC+AGG 0.355596 7_3:+54462792 None:intergenic
TCCCCATTATGTGTTGGCTT+TGG 0.355941 7_3:+54473186 None:intergenic
ACCTATCCAGCACTCCATTC+TGG 0.357593 7_3:+54473983 None:intergenic
TTGTCACTCCCAACCCTTAG+AGG 0.358774 7_3:+54466844 None:intergenic
CAATGGCTTTGCTTGTGTCT+GGG 0.359584 7_3:-54467898 Msa1109980:CDS
ATGGAGTGGTTAACAGCTTT+GGG 0.361625 7_3:-54466687 Msa1109980:CDS
ATGTAGTTTCTGTTGACTTT+GGG 0.363148 7_3:-54462766 Msa1109980:three_prime_UTR
AACAAATCCAATTGCTAAAT+GGG 0.366250 7_3:-54465876 Msa1109980:CDS
TGCCAAAGCCAACACATAAT+GGG 0.366520 7_3:-54473188 Msa1109980:CDS
TTTATGTCCCATTTAGCAAT+TGG 0.368322 7_3:+54465869 None:intergenic
TTTCCCGTCGGATTTGGTTC+AGG 0.370242 7_3:-54468696 Msa1109980:CDS
GTGATGATGATGACAAGTTT+AGG 0.372234 7_3:-54467598 Msa1109980:CDS
GGAACTTTGGGTCTTCAATA+AGG 0.373176 7_3:-54473166 Msa1109980:intron
TTTCCAGAGGGGAAAATAAT+CGG 0.373487 7_3:-54467859 Msa1109980:CDS
GCAAAACCATTGAAGCCTTC+TGG 0.374849 7_3:-54466532 Msa1109980:CDS
TGCAGCTGATGGAAACATTC+GGG 0.375134 7_3:-54465164 Msa1109980:intron
AGCTTAGAAATTCCTTTGTC+AGG 0.376534 7_3:+54465311 None:intergenic
CGTCGGGTTCTGTCCATAAT+AGG 0.376679 7_3:-54466571 Msa1109980:CDS
TCTTCTTGGTTTGATATGAA+TGG 0.377688 7_3:-54466463 Msa1109980:CDS
CAGAAGGCATTAGAGTTGAT+TGG 0.378979 7_3:-54473449 Msa1109980:CDS
AACCGGCGTGATTCGGAATT+CGG 0.382084 7_3:-54476667 Msa1109980:CDS
GAACTATAAGAACAGTTGAT+TGG 0.382545 7_3:+54476806 None:intergenic
ACAAGAATCTGTCTTAGTTC+TGG 0.382667 7_3:+54468977 None:intergenic
AATCTATTGCTGCTGCATAT+TGG 0.382883 7_3:-54466993 Msa1109980:CDS
TGCAACAGCTTCAGAACATA+AGG 0.385521 7_3:+54469010 None:intergenic
TTAGGCTTGTATGTGGATTA+CGG 0.385576 7_3:-54463738 Msa1109980:intron
GGGCTGAAGTTAGTATAGTT+AGG 0.389205 7_3:-54467577 Msa1109980:CDS
GGAGATATCTTTATTACATC+TGG 0.389558 7_3:+54474011 None:intergenic
GAATCGTCACGGTGATGATT+AGG 0.390935 7_3:+54476784 None:intergenic
ACAGCTGCCTATAGTTCTTC+AGG 0.394484 7_3:-54469918 Msa1109980:intron
AACACATAATGGGGAACTTT+GGG 0.394970 7_3:-54473178 Msa1109980:CDS
AGCAAAGCCATTGAAGGAAA+AGG 0.399807 7_3:+54467908 None:intergenic
CTAGGAAGATTTCTTGATAT+GGG 0.400989 7_3:-54469175 Msa1109980:CDS
GAAAACCTTAATGAGTTGTT+TGG 0.401002 7_3:+54463387 None:intergenic
CCTACTGGTCCATCGGATAG+TGG 0.402214 7_3:-54476529 Msa1109980:CDS
TTATTCTGTCAGCTGTTAGT+AGG 0.407108 7_3:-54465901 Msa1109980:intron
TGCTATGATTTCTTATATCA+AGG 0.407699 7_3:+54463497 None:intergenic
TGGGAATTGGCTTTCAGCCT+GGG 0.408349 7_3:-54463687 Msa1109980:CDS
TGGTTAGTGCTTCTCAGGCC+GGG 0.411206 7_3:-54463531 Msa1109980:CDS
GTCCGAATGCAGTTGTTGAT+TGG 0.411382 7_3:-54465057 Msa1109980:CDS
GCAAAGCCATTGAAGGAAAA+GGG 0.412992 7_3:+54467909 None:intergenic
GTGAGCTTCAATAGTGAGAT+AGG 0.413367 7_3:+54463471 None:intergenic
TCAGTTGGTTAGTGCTTCTC+AGG 0.413755 7_3:-54463536 Msa1109980:intron
AGTTGGGAACCTTGGTCGTC+GGG 0.415098 7_3:-54466587 Msa1109980:CDS
TTTGAGCTTGAGCTTCCTAC+TGG 0.415565 7_3:-54476544 Msa1109980:CDS
AATGCATTGTCTAAAGGCTT+TGG 0.415793 7_3:+54466664 None:intergenic
GTGAATACATCTGAAAATAT+TGG 0.415847 7_3:-54463063 Msa1109980:three_prime_UTR
GATGTAGTTTCTGTTGACTT+TGG 0.416948 7_3:-54462767 Msa1109980:three_prime_UTR
CTGATGGAAACATTCGGGTT+TGG 0.416980 7_3:-54465159 Msa1109980:CDS
TGCATTTACCAGTATGCGTC+GGG 0.417077 7_3:-54464874 Msa1109980:intron
TGATGATTGACTCCTGTAAA+CGG 0.417888 7_3:-54462804 Msa1109980:three_prime_UTR
GGCTGGGAATTCTACACTCT+GGG 0.419321 7_3:+54471414 None:intergenic
TCGTCAGCAGCAACCACTAT+AGG 0.419378 7_3:+54465812 None:intergenic
AGAACTATAGGCAGCTGTTC+GGG 0.419419 7_3:+54469923 None:intergenic
ACAACCTTTCTCTCCTATAG+TGG 0.419745 7_3:-54465825 Msa1109980:CDS
ATCGTTTAAGGCGGCGGCTG+AGG 0.420823 7_3:+54476720 None:intergenic
CGAACACCAGAAGGCTTCAA+TGG 0.421456 7_3:+54466526 None:intergenic
GCACACCATGCCCATTGTAA+TGG 0.424187 7_3:+54473208 None:intergenic
TGGGTAGTAAACCTCTGGCT+GGG 0.424965 7_3:+54467789 None:intergenic
CTGACGAGAATGAACGTATC+AGG 0.427121 7_3:-54465796 Msa1109980:intron
GGCTCAGTTTGTGAATCATT+AGG 0.427903 7_3:+54467931 None:intergenic
CTGTTGAGTGTTGCTTCAGA+TGG 0.427927 7_3:-54467551 Msa1109980:CDS
ATTCACCAAGAAGAGTCTTT+CGG 0.428570 7_3:+54470658 None:intergenic
TTTGAGGTGAATATCGGAAT+AGG 0.429255 7_3:+54476931 None:intergenic
GGAGGAGTTCTGAAGGTTAG+AGG 0.429828 7_3:+54466289 None:intergenic
TCAATAGTTCTGTTCCTAAC+CGG 0.431256 7_3:-54476684 Msa1109980:CDS
TTTAGCTAGAAGAGAGGAGA+GGG 0.432800 7_3:-54466044 Msa1109980:CDS
CATTGAAGCCTTCTGGTGTT+CGG 0.432879 7_3:-54466525 Msa1109980:CDS
AACTATAAGAACAGTTGATT+GGG 0.433178 7_3:+54476807 None:intergenic
TCGTTACTATCCTACTCTAA+TGG 0.435036 7_3:-54463335 Msa1109980:CDS
TTGGTTAGTGCTTCTCAGGC+CGG 0.435631 7_3:-54463532 Msa1109980:CDS
GCTTGTGTCTGGGGAAATTG+TGG 0.436306 7_3:-54467888 Msa1109980:CDS
CTGAGGCTGAAGCTGATGCA+GGG 0.442576 7_3:+54476737 None:intergenic
GCGAGCAAGACTAGCAGAAA+CGG 0.444153 7_3:+54466489 None:intergenic
TAAGTAGTGTTGCCTCTTCG+TGG 0.444204 7_3:+54465357 None:intergenic
AGAAGGCATTAGAGTTGATT+GGG 0.444784 7_3:-54473448 Msa1109980:CDS
AGTGGAGGCTCCGACAAATA+AGG 0.444860 7_3:-54462955 Msa1109980:three_prime_UTR
ATGCAGCTGATGGAAACATT+CGG 0.447442 7_3:-54465165 Msa1109980:intron
TGATGGGTTGGTGGTAGCAT+AGG 0.448684 7_3:+54470336 None:intergenic
GAATACAATGCATTGTCTAA+AGG 0.449571 7_3:+54466658 None:intergenic
CTAAGGGTTTCCGATTTGAA+TGG 0.450298 7_3:-54476860 Msa1109980:exon
AGGCTGCTTCTCAAGTTCAC+GGG 0.450385 7_3:-54464125 Msa1109980:CDS
TGATGATGATGACAAGTTTA+GGG 0.450609 7_3:-54467597 Msa1109980:CDS
CGAAATGGAGGCCGAAGGAT+AGG 0.451245 7_3:-54476498 Msa1109980:CDS
TGCTGGGTTGCAGTCATGTC+AGG 0.451540 7_3:-54468145 Msa1109980:intron
TAGGCTGCTTCTCAAGTTCA+CGG 0.453837 7_3:-54464126 Msa1109980:CDS
TGCCAATCAACAACTGCATT+CGG 0.455058 7_3:+54465055 None:intergenic
TTTCCGATTTGAATGGCATT+GGG 0.455585 7_3:-54476853 Msa1109980:exon
GAGAGGAATTGTCAGACAAT+GGG 0.457326 7_3:+54466749 None:intergenic
AGGAACAGAACTATTGAAAT+CGG 0.458630 7_3:+54476690 None:intergenic
AAGATCCATCTCCGCGAGTT+GGG 0.460568 7_3:-54466603 Msa1109980:CDS
TATATGTAGGCATTATCTGT+TGG 0.461350 7_3:-54469040 Msa1109980:intron
GATTCAGGAATACTGAATGA+TGG 0.462599 7_3:-54466718 Msa1109980:CDS
AGGGTAAATAGCACACAAAC+AGG 0.462943 7_3:+54462880 None:intergenic
TTAGGAATCAATCATGAGAT+TGG 0.464024 7_3:+54476879 None:intergenic
TTGAATGAATACCTGAATGA+AGG 0.464950 7_3:+54471636 None:intergenic
AATTCCGAATCACGCCGGTT+AGG 0.465842 7_3:+54476670 None:intergenic
CAACACATAATGGGGAACTT+TGG 0.466749 7_3:-54473179 Msa1109980:CDS
TGTTTGATATTCTTCTCAGC+TGG 0.467414 7_3:+54463155 None:intergenic
TTATTGATAAGCTTCATGAA+TGG 0.467564 7_3:-54471510 Msa1109980:intron
GTTTCCGATTTGAATGGCAT+TGG 0.469318 7_3:-54476854 Msa1109980:exon
CATTCAAATCGGAAACCCTT+AGG 0.469601 7_3:+54476861 None:intergenic
AATAATTTACAAATAAAGAA+AGG 0.471019 7_3:+54462860 None:intergenic
TGATATGGGCCCATGGGCTG+TGG 0.471403 7_3:-54469161 Msa1109980:CDS
TCTCCCAATGCCATTCAAAT+CGG 0.471515 7_3:+54476850 None:intergenic
TGATGTACCTGAAGAACTAT+AGG 0.472475 7_3:+54469911 None:intergenic
GAACATCGATGAAATCTTCA+AGG 0.473957 7_3:+54463179 None:intergenic
GATGATTGACTCCTGTAAAC+GGG 0.474416 7_3:-54462803 Msa1109980:three_prime_UTR
CAAGAAGCTTGTATTGAAGC+TGG 0.475125 7_3:-54467994 Msa1109980:CDS
TTGCCATCTTTCATACTGAC+TGG 0.477737 7_3:+54473415 None:intergenic
GGGTCAGCTAGTCCAGTGTC+TGG 0.481333 7_3:+54466184 None:intergenic
TCTCTTCTGAAAATGGGAAA+CGG 0.482174 7_3:+54477046 None:intergenic
ATTGCTAAATGGGACATAAA+GGG 0.482953 7_3:-54465866 Msa1109980:CDS
GAGTTGTTTGGCAGAACCAC+TGG 0.483579 7_3:+54463399 None:intergenic
CGAGCAAGACTAGCAGAAAC+GGG 0.483754 7_3:+54466490 None:intergenic
GACACAAGCAAAGCCATTGA+AGG 0.483939 7_3:+54467902 None:intergenic
GATGGTGGTTGTGACGGTTA+CGG 0.484343 7_3:+54476992 None:intergenic
TTCGGTCATTTGGACGGCCA+GGG 0.484511 7_3:+54470676 None:intergenic
ACCCTTAGAGGACCAATTTG+AGG 0.486527 7_3:+54466856 None:intergenic
GATATCTCCTTGTGCCAGAA+TGG 0.487497 7_3:-54473997 Msa1109980:CDS
TTTCGGTCATTTGGACGGCC+AGG 0.487520 7_3:+54470675 None:intergenic
AATCTCATGATTGATTCCTA+AGG 0.487670 7_3:-54476877 Msa1109980:five_prime_UTR
TTTGATTCGTGTAGAAGTGT+TGG 0.488762 7_3:-54467632 Msa1109980:CDS
ATTGACTAATATTAAAGATA+CGG 0.488999 7_3:-54466932 Msa1109980:CDS
AATATTAGTCAATGATGGTA+AGG 0.489101 7_3:+54466942 None:intergenic
TCTTTAATATTAGTCAATGA+TGG 0.489110 7_3:+54466937 None:intergenic
AAATTGGTCCTCTAAGGGTT+GGG 0.489340 7_3:-54466852 Msa1109980:CDS
GAAAAGCATACCCTATCCTT+CGG 0.490898 7_3:+54476487 None:intergenic
CGGCTGGGAATTCTACACTC+TGG 0.491021 7_3:+54471413 None:intergenic
AATGGCTTTGCTTGTGTCTG+GGG 0.491028 7_3:-54467897 Msa1109980:CDS
CAGTGTCTGGAGAAGTCATC+AGG 0.493310 7_3:+54466197 None:intergenic
GATATCTTTATTACATCTGG+TGG 0.493561 7_3:+54474014 None:intergenic
TACATCTGAAAATATTGGTA+GGG 0.494128 7_3:-54463058 Msa1109980:three_prime_UTR
TTCTAAACAGAACCAACATA+TGG 0.495046 7_3:-54466899 Msa1109980:CDS
TATGAAGTTTCTTGATAGCT+CGG 0.496107 7_3:-54468088 Msa1109980:CDS
GAGTTGGGAACCTTGGTCGT+CGG 0.497584 7_3:-54466588 Msa1109980:CDS
AGGTTCCCAACTCGCGGAGA+TGG 0.497813 7_3:+54466598 None:intergenic
CTGCATTCTCTTCAATTCAT+GGG 0.497920 7_3:-54465099 Msa1109980:CDS
AGTATATATAATTGGAGTTG+TGG 0.498191 7_3:-54466115 Msa1109980:CDS
CAGCCATTGCACGTTGCTCT+GGG 0.498329 7_3:+54468058 None:intergenic
GTATATATAATTGGAGTTGT+GGG 0.499572 7_3:-54466114 Msa1109980:CDS
ATCTCACTATTGAAGCTCAC+CGG 0.501356 7_3:-54463468 Msa1109980:CDS
TTCAAATGCTGTTAACTGCT+CGG 0.501728 7_3:+54469982 None:intergenic
CAAATTGGTCCTCTAAGGGT+TGG 0.501984 7_3:-54466853 Msa1109980:CDS
GCCGTCATCGTTTAAGGCGG+CGG 0.503418 7_3:+54476714 None:intergenic
GGGTAGTAAACCTCTGGCTG+GGG 0.505245 7_3:+54467790 None:intergenic
TTGGGTAGTAAACCTCTGGC+TGG 0.507052 7_3:+54467788 None:intergenic
GATAACGGTGATGGTGATTA+CGG 0.507056 7_3:+54476959 None:intergenic
AAGAACTATAGGCAGCTGTT+CGG 0.507220 7_3:+54469922 None:intergenic
TCTCACTATTGAAGCTCACC+GGG 0.507379 7_3:-54463467 Msa1109980:CDS
GCATGGAATGTTCTTCCTCA+TGG 0.509129 7_3:-54470600 Msa1109980:intron
GTCGGATTTGGTTCAGGACA+AGG 0.510027 7_3:-54468690 Msa1109980:intron
TGGTCCATCGGATAGTGGTT+TGG 0.511215 7_3:-54476524 Msa1109980:CDS
TTACTTATAGACAAGATCCC+TGG 0.512278 7_3:-54470693 Msa1109980:CDS
TCAACTTCCTTCATTAGTTG+AGG 0.512324 7_3:-54470183 Msa1109980:CDS
ATAGTGGTTTGGTCTCGAAA+TGG 0.512717 7_3:-54476513 Msa1109980:CDS
GGTTGTGACGGTTACGGTGG+CGG 0.513125 7_3:+54476998 None:intergenic
ACAACTGCGATAAATATGTA+TGG 0.514763 7_3:+54463121 None:intergenic
ACGAAGATGACCTTATTTGT+CGG 0.515788 7_3:+54462945 None:intergenic
GGTAGCATAGGGTGAGAAAC+GGG 0.516470 7_3:+54470348 None:intergenic
GATGGGTTGGTGGTAGCATA+GGG 0.516492 7_3:+54470337 None:intergenic
GGTGATGGTGATTACGGTTA+CGG 0.517481 7_3:+54476965 None:intergenic
TTAGGATCCTCAACTAATGA+AGG 0.518684 7_3:+54470176 None:intergenic
ACTTGAATTTAATTACATGT+TGG 0.519170 7_3:+54462729 None:intergenic
ATCTCATGATTGATTCCTAA+GGG 0.519290 7_3:-54476876 Msa1109980:five_prime_UTR
ACACTTTCTTTACCTTTCCA+GGG 0.519371 7_3:+54463659 None:intergenic
ACCTCAAATTGGTCCTCTAA+GGG 0.520008 7_3:-54466857 Msa1109980:CDS
CCATATCAAGAAATCTTCCT+AGG 0.520055 7_3:+54469176 None:intergenic
CCTCGCCCAAGTTACATAGC+TGG 0.520292 7_3:-54466256 Msa1109980:CDS
GTCTGAGGGTTGCAATTGAC+TGG 0.520301 7_3:-54462991 Msa1109980:three_prime_UTR
GCAACCACTATAGGAGAGAA+AGG 0.521511 7_3:+54465821 None:intergenic
CTGAATGATGGTTTCAGCAA+TGG 0.521598 7_3:-54466706 Msa1109980:CDS
CTTGTGTCTGGGGAAATTGT+GGG 0.521880 7_3:-54467887 Msa1109980:CDS
CAATTATATATACTTGATTG+AGG 0.522696 7_3:+54466124 None:intergenic
GAGTCCATTGGTGAGGGCGG+AGG 0.522801 7_3:-54467528 Msa1109980:CDS
TGTACTTGCTATGTGTACTT+TGG 0.526566 7_3:-54466629 Msa1109980:CDS
TCTCCGCGAGTTGGGAACCT+TGG 0.526738 7_3:-54466595 Msa1109980:CDS
CAAAGTTCCCCATTATGTGT+TGG 0.527001 7_3:+54473180 None:intergenic
GGCTGAAGCTGATGCAGGGG+CGG 0.527639 7_3:+54476741 None:intergenic
CAGCAAGTAGTAATTGATAT+GGG 0.530194 7_3:+54463275 None:intergenic
AATGCGGAGAGTATGTTCAT+TGG 0.530200 7_3:-54466233 Msa1109980:CDS
AAATCTTCCTAGGAGTACTA+AGG 0.530534 7_3:+54469186 None:intergenic
GGTTAGTGCTTCTCAGGCCG+GGG 0.531119 7_3:-54463530 Msa1109980:CDS
TCAATTCATGGGCATAAACC+TGG 0.531950 7_3:-54465088 Msa1109980:CDS
ACTGGGTACCCTTGTTGATG+TGG 0.532867 7_3:-54467657 Msa1109980:CDS
CTTGTGCCAGAATGGAGTGC+TGG 0.533059 7_3:-54473989 Msa1109980:CDS
TTGTTCCATTACAATGGGCA+TGG 0.534582 7_3:-54473213 Msa1109980:CDS
CAGAACCAACATATGGCTCA+TGG 0.534648 7_3:-54466892 Msa1109980:CDS
AGGAATTTCTAAGCTCTGCC+TGG 0.535257 7_3:-54465303 Msa1109980:CDS
AAAGTCCCCGATCCTAAAAG+TGG 0.536621 7_3:+54466163 None:intergenic
ACCTTTCCAGGGTCTAACCC+AGG 0.537318 7_3:+54463670 None:intergenic
ATCCATGCTGCAGGGATGCG+TGG 0.537812 7_3:-54470232 Msa1109980:intron
ATGTTTCTTAGGCTTGTATG+TGG 0.539010 7_3:-54463745 Msa1109980:intron
TGGAATGCTTCTAACTCCGA+TGG 0.539812 7_3:-54471490 Msa1109980:CDS
AAAGATCCATCTCCGCGAGT+TGG 0.541216 7_3:-54466604 Msa1109980:CDS
TTCATTAGCCTCCATGTCTG+AGG 0.541867 7_3:-54463006 Msa1109980:three_prime_UTR
GCTACCTCCGCCCTCACCAA+TGG 0.542363 7_3:+54467524 None:intergenic
TAGATTTCAGGTGCTTGTTG+TGG 0.543777 7_3:+54467010 None:intergenic
ATCAATCATGAGATTGGTGA+TGG 0.544123 7_3:+54476885 None:intergenic
ATAATTTACAAATAAAGAAA+GGG 0.544753 7_3:+54462861 None:intergenic
TTTGTTGTGCAGATGAAGAC+AGG 0.544896 7_3:-54474077 Msa1109980:intron
TAAAGTAATTCGTGATGGGC+GGG 0.545020 7_3:-54466818 Msa1109980:CDS
TCTTACCACACCTATAAAGA+TGG 0.545585 7_3:-54471374 Msa1109980:CDS
CAAGGTGCTTTAAGCAGACA+TGG 0.546470 7_3:+54467965 None:intergenic
TGAAATACACACCAGAGTGC+TGG 0.548377 7_3:+54465990 None:intergenic
TTGACTAATATTAAAGATAC+GGG 0.548436 7_3:-54466931 Msa1109980:CDS
CACATATGATGCTGATGGGT+TGG 0.550512 7_3:+54470324 None:intergenic
TCGGAATAGGATGGTGATAA+CGG 0.552622 7_3:+54476944 None:intergenic
TGGTAGCATAGGGTGAGAAA+CGG 0.552947 7_3:+54470347 None:intergenic
AATTCTAAAGTAATTCGTGA+TGG 0.553123 7_3:-54466823 Msa1109980:CDS
TTTCGTGCCTTAGTACTCCT+AGG 0.553998 7_3:-54469193 Msa1109980:CDS
TGTTGAGTGTTGCTTCAGAT+GGG 0.554161 7_3:-54467550 Msa1109980:CDS
ATTTCTTGATATGGGCCCAT+GGG 0.554829 7_3:-54469167 Msa1109980:CDS
ATACATCTGAAAATATTGGT+AGG 0.555583 7_3:-54463059 Msa1109980:three_prime_UTR
ATTACCAGATCCACAGCCCA+TGG 0.556179 7_3:+54469151 None:intergenic
TCACCTCAAAACACCACCTA+GGG 0.558188 7_3:-54476918 Msa1109980:five_prime_UTR
AATATTAAAGATACGGGTGG+TGG 0.559024 7_3:-54466925 Msa1109980:CDS
TGCTTCAGATGGGAGTCCAT+TGG 0.559123 7_3:-54467540 Msa1109980:CDS
CTAATGAAGGAAGTTGAGAA+AGG 0.559222 7_3:+54470189 None:intergenic
TGACCAGTCAGTATGAAAGA+TGG 0.560952 7_3:-54473418 Msa1109980:CDS
CTAGTTCTGGAATAATGCAC+GGG 0.562018 7_3:-54466774 Msa1109980:CDS
GAGTCTTTCGGTCATTTGGA+CGG 0.562141 7_3:+54470670 None:intergenic
GAAATGGAGGCCGAAGGATA+GGG 0.562725 7_3:-54476497 Msa1109980:intron
AATACCACATATGATGCTGA+TGG 0.563148 7_3:+54470319 None:intergenic
ATTCTAAAGTAATTCGTGAT+GGG 0.563565 7_3:-54466822 Msa1109980:CDS
GATTACGGTTACGGTGGTGA+TGG 0.563666 7_3:+54476974 None:intergenic
CTGGGTACCCTTGTTGATGT+GGG 0.564373 7_3:-54467656 Msa1109980:CDS
GATTTCTTGATATGGGCCCA+TGG 0.564393 7_3:-54469168 Msa1109980:CDS
TGAGAGGAATTGTCAGACAA+TGG 0.564939 7_3:+54466748 None:intergenic
TACTCCCATGAGCCATATGT+TGG 0.565241 7_3:+54466887 None:intergenic
CTAAAGCCGTGAGTGAGCCC+CGG 0.565461 7_3:+54463449 None:intergenic
AGCCTTGAGGGTGATCAACT+GGG 0.568096 7_3:-54463364 Msa1109980:CDS
CATAATAGGTATTGAACAAG+TGG 0.568635 7_3:-54466557 Msa1109980:CDS
GCAACAGCTTCAGAACATAA+GGG 0.568675 7_3:+54469011 None:intergenic
CTACCCAGAGCAACGTGCAA+TGG 0.572962 7_3:-54468061 Msa1109980:CDS
GCTAGTTCTGGAATAATGCA+CGG 0.574366 7_3:-54466775 Msa1109980:CDS
TATCAATTACTACTTGCTGC+TGG 0.574931 7_3:-54463271 Msa1109980:CDS
AAGTTGAGAAAGGCAGAGCT+CGG 0.576060 7_3:+54470199 None:intergenic
ATCAAGGAATTGGATATCCC+CGG 0.576094 7_3:+54463513 None:intergenic
TCAATTGCAACCCTCAGACA+TGG 0.576115 7_3:+54462995 None:intergenic
TCTTGGTTTGATATGAATGG+TGG 0.578115 7_3:-54466460 Msa1109980:intron
TTGGAAAGACTATTCTCTGA+GGG 0.578397 7_3:-54465140 Msa1109980:CDS
GACGTCATCAATAATGCTGT+GGG 0.578998 7_3:-54464848 Msa1109980:CDS
GTTTCTTATGCTCAGAACCA+TGG 0.579781 7_3:+54469948 None:intergenic
TGGGAGTCCATTGGTGAGGG+CGG 0.580093 7_3:-54467531 Msa1109980:CDS
GCAATCCCTTGGTGACCCAT+CGG 0.581482 7_3:+54471474 None:intergenic
CAACCCATCAGCATCATATG+TGG 0.582433 7_3:-54470323 Msa1109980:intron
ATATGATGCTGATGGGTTGG+TGG 0.582930 7_3:+54470327 None:intergenic
GCATTCGGACTCCTCACACC+AGG 0.584003 7_3:+54465070 None:intergenic
GCATTCCAGCTATGTAACTT+GGG 0.585210 7_3:+54466251 None:intergenic
TCATTAGCCTCCATGTCTGA+GGG 0.585532 7_3:-54463005 Msa1109980:three_prime_UTR
AGATGGGAGTCCATTGGTGA+GGG 0.585533 7_3:-54467534 Msa1109980:CDS
ACATCTGAAAATATTGGTAG+GGG 0.586077 7_3:-54463057 Msa1109980:three_prime_UTR
CATTGCACGTTGCTCTGGGT+AGG 0.589324 7_3:+54468062 None:intergenic
TCCATGCTGCAGGGATGCGT+GGG 0.589868 7_3:-54470231 Msa1109980:intron
TTACATGTTGGTCAAAGCAA+AGG 0.590067 7_3:+54462741 None:intergenic
CAATGCCATCTTTATAGGTG+TGG 0.590305 7_3:+54471369 None:intergenic
CACGCTCCAATTATTGCCAG+TGG 0.591507 7_3:-54463415 Msa1109980:CDS
TTTATCAAAGAATTAGTCTG+AGG 0.591653 7_3:+54466967 None:intergenic
ACTTGATCCAACATTGGATG+AGG 0.591843 7_3:-54473286 Msa1109980:CDS
CAGATGGGAGTCCATTGGTG+AGG 0.592108 7_3:-54467535 Msa1109980:CDS
ATGCATTTACCAGTATGCGT+CGG 0.593797 7_3:-54464875 Msa1109980:intron
CTGATGACTTCTCCAGACAC+TGG 0.595660 7_3:-54466196 Msa1109980:CDS
TGAGCTTCCTACTGGTCCAT+CGG 0.595741 7_3:-54476536 Msa1109980:CDS
ACTGGAAGAAAGAAGCATAG+TGG 0.596313 7_3:-54462973 Msa1109980:three_prime_UTR
AATCTGTCTTAGTTCTGGTG+TGG 0.597028 7_3:+54468982 None:intergenic
ATGTCGTAGATATGCAAAGT+CGG 0.597603 7_3:-54473244 Msa1109980:CDS
TTTGAAGTTTGGCTCGACCA+TGG 0.599081 7_3:-54469965 Msa1109980:CDS
GGTGGTGATGGTGGTTGTGA+CGG 0.600933 7_3:+54476986 None:intergenic
AGACGTCATCAATAATGCTG+TGG 0.601492 7_3:-54464849 Msa1109980:CDS
AAAGTACCTTGTCAAGTGCA+AGG 0.602824 7_3:+54468936 None:intergenic
CCAGCTATGTAACTTGGGCG+AGG 0.603016 7_3:+54466256 None:intergenic
CTAAAGTAATTCGTGATGGG+CGG 0.603092 7_3:-54466819 Msa1109980:CDS
AGAGTGCAGTGTCTCTGCGT+TGG 0.603707 7_3:-54464782 Msa1109980:intron
TGAGGCTGAAGCTGATGCAG+GGG 0.605893 7_3:+54476738 None:intergenic
CAAAGCCATTGAAGGAAAAG+GGG 0.607316 7_3:+54467910 None:intergenic
GGAATGCTTCTAACTCCGAT+GGG 0.608233 7_3:-54471489 Msa1109980:CDS
GGGAAAATAATCGGTTTGCA+GGG 0.608356 7_3:-54467850 Msa1109980:CDS
ACTGACTGGAGGAGTTCTGA+AGG 0.608372 7_3:+54466282 None:intergenic
AGGTGAATATCGGAATAGGA+TGG 0.608570 7_3:+54476935 None:intergenic
CCACTATCCGATGGACCAGT+AGG 0.609264 7_3:+54476529 None:intergenic
AGAACCAACATATGGCTCAT+GGG 0.609660 7_3:-54466891 Msa1109980:CDS
TGGAAAGACTATTCTCTGAG+GGG 0.610056 7_3:-54465139 Msa1109980:CDS
GGTGCGAGTAGTAGTAGTGT+AGG 0.610228 7_3:-54476643 Msa1109980:CDS
GTGAGGGCGGAGGTAGCAGT+TGG 0.610399 7_3:-54467518 Msa1109980:intron
GGCTGCTTCTCAAGTTCACG+GGG 0.611318 7_3:-54464124 Msa1109980:CDS
CAGCACTCCATTCTGGCACA+AGG 0.611408 7_3:+54473990 None:intergenic
CATTAGGAGATGAACTCTCA+AGG 0.611982 7_3:+54467947 None:intergenic
TACGGTTACGGTGGTGATGG+TGG 0.612606 7_3:+54476977 None:intergenic
TATCATCAAGCTCATTCACC+AGG 0.612823 7_3:+54465285 None:intergenic
TGCTGAGCGAATTATGCGAT+CGG 0.615093 7_3:-54470382 Msa1109980:CDS
CAAGTAGTAATTGATATGGG+TGG 0.616065 7_3:+54463278 None:intergenic
TCACTAGTCCGAACACCAGA+AGG 0.616894 7_3:+54466517 None:intergenic
CAGTAACTGATACGATTGCA+TGG 0.617714 7_3:-54470617 Msa1109980:CDS
GCAAGCATAATGCAATCCCT+TGG 0.617901 7_3:+54471463 None:intergenic
GTGGTTTGGTCTCGAAATGG+AGG 0.619908 7_3:-54476510 Msa1109980:CDS
CATTTACCAGTATGCGTCGG+GGG 0.620083 7_3:-54464872 Msa1109980:intron
TAACTCCGATGGGTCACCAA+GGG 0.620721 7_3:-54471479 Msa1109980:CDS
GGAAAGACTATTCTCTGAGG+GGG 0.621002 7_3:-54465138 Msa1109980:CDS
ATAGTGAAATGCCAGCACTC+TGG 0.621116 7_3:-54466001 Msa1109980:intron
AATCAAATCCCACATCAACA+AGG 0.621891 7_3:+54467648 None:intergenic
TTGTCCTGAACCAAATCCGA+CGG 0.622723 7_3:+54468692 None:intergenic
AAGCTGTAAATACATCGGCT+GGG 0.625123 7_3:+54471398 None:intergenic
AACATCGATGAAATCTTCAA+GGG 0.625277 7_3:+54463180 None:intergenic
TGGTAATGCTGCTACTACGA+TGG 0.625301 7_3:-54476614 Msa1109980:CDS
TGCCCAGTTGATCACCCTCA+AGG 0.625488 7_3:+54463362 None:intergenic
GGCTGGGGTTCAGACAGTAG+AGG 0.627593 7_3:+54467805 None:intergenic
AAAGATCCTTGCACTTGACA+AGG 0.628581 7_3:-54468942 Msa1109980:intron
GCCAGAATGGAGTGCTGGAT+AGG 0.630372 7_3:-54473984 Msa1109980:intron
TCCTGAATCAGAATGATGAG+AGG 0.630424 7_3:+54466732 None:intergenic
TGTCCTGAACCAAATCCGAC+GGG 0.632362 7_3:+54468693 None:intergenic
ACTATAGGCAGCTGTTCGGG+TGG 0.632535 7_3:+54469926 None:intergenic
CTATAAAGATGGCATTGCGA+TGG 0.636761 7_3:-54471363 Msa1109980:intron
CGACCAAGGTTCCCAACTCG+CGG 0.637246 7_3:+54466592 None:intergenic
GTACTAAGGCACGAAATCGA+TGG 0.637270 7_3:+54469200 None:intergenic
ACACTGCACTCTGATGATGA+AGG 0.638964 7_3:+54464793 None:intergenic
TTGTGGGAAGAGTTTCCAGA+GGG 0.639050 7_3:-54467871 Msa1109980:CDS
ATCAACTCTAATGCCTTCTG+TGG 0.641121 7_3:+54473452 None:intergenic
ATGTCAGGTCGATCTAGTGA+AGG 0.644778 7_3:-54468130 Msa1109980:CDS
ATCAAATCCCACATCAACAA+GGG 0.644794 7_3:+54467649 None:intergenic
CGGCGTGATTCGGAATTCGG+TGG 0.646826 7_3:-54476664 Msa1109980:CDS
GTATGAAAGATGGCAACCAA+AGG 0.647808 7_3:-54473408 Msa1109980:intron
TTACCAGATCCACAGCCCAT+GGG 0.651482 7_3:+54469152 None:intergenic
TTCACCTCAAAACACCACCT+AGG 0.652288 7_3:-54476919 Msa1109980:five_prime_UTR
GCCAAAGCCAACACATAATG+GGG 0.652486 7_3:-54473187 Msa1109980:CDS
GTGTCAACTTGATCCAACAT+TGG 0.652962 7_3:-54473292 Msa1109980:CDS
GAGACCAAACCACTATCCGA+TGG 0.653465 7_3:+54476520 None:intergenic
AGAGGAATTGTCAGACAATG+GGG 0.655055 7_3:+54466750 None:intergenic
ACTAATATTAAAGATACGGG+TGG 0.655092 7_3:-54466928 Msa1109980:CDS
TAGGATGGTGATAACGGTGA+TGG 0.655468 7_3:+54476950 None:intergenic
ATACCACATATGATGCTGAT+GGG 0.655820 7_3:+54470320 None:intergenic
ACTGTCTGAACCCCAGCCAG+AGG 0.656565 7_3:-54467800 Msa1109980:intron
TAGAGTAGGATAGTAACGAA+TGG 0.658615 7_3:+54463339 None:intergenic
AAGTCCCCGATCCTAAAAGT+GGG 0.661825 7_3:+54466164 None:intergenic
GGTCTCGAAATGGAGGCCGA+AGG 0.662834 7_3:-54476503 Msa1109980:CDS
GCTATGTAACTTGGGCGAGG+AGG 0.663072 7_3:+54466259 None:intergenic
GGGCGAGGAGGACTGACTGG+AGG 0.663366 7_3:+54466271 None:intergenic
CAGGTCGATCTAGTGAAGGA+CGG 0.664677 7_3:-54468126 Msa1109980:CDS
TCTGGAGAAGTCATCAGGTG+AGG 0.664859 7_3:+54466202 None:intergenic
TGGACAGAACCCGACGACCA+AGG 0.665028 7_3:+54466578 None:intergenic
ATGGGCATAAACCTGGTGTG+AGG 0.666636 7_3:-54465081 Msa1109980:CDS
CAAGTTACATAGCTGGAATG+CGG 0.669039 7_3:-54466249 Msa1109980:CDS
AAGACAAGCTGTAAATACAT+CGG 0.669783 7_3:+54471393 None:intergenic
GGTGGTTGTGACGGTTACGG+TGG 0.669793 7_3:+54476995 None:intergenic
GTGGAAACTTAAGCAGCTCA+CGG 0.671272 7_3:+54463297 None:intergenic
CTAACTCCGATGGGTCACCA+AGG 0.671283 7_3:-54471480 Msa1109980:CDS
CAGATGTATTCACAGCAGAG+AGG 0.673965 7_3:+54463073 None:intergenic
CACCGAATTCCGAATCACGC+CGG 0.674167 7_3:+54476665 None:intergenic
TTGTAGAGGTGGAATCGTCA+CGG 0.675714 7_3:+54476773 None:intergenic
GCCTGGGTTAGACCCTGGAA+AGG 0.679107 7_3:-54463671 Msa1109980:intron
GCCGCCGCCTTAAACGATGA+CGG 0.682902 7_3:-54476715 Msa1109980:CDS
GGAAGAAAGAAGCATAGTGG+AGG 0.684839 7_3:-54462970 Msa1109980:three_prime_UTR
CAGGGTATGGAACCACGAAG+AGG 0.685333 7_3:-54465369 Msa1109980:CDS
TCATTGAAGAAACTCGTCTG+CGG 0.685492 7_3:+54476583 None:intergenic
ATTGTGGATGGTCATAGAAG+AGG 0.687893 7_3:-54468018 Msa1109980:CDS
GCATTTACCAGTATGCGTCG+GGG 0.688475 7_3:-54464873 Msa1109980:intron
TGATGGTTTCAGCAATGGAG+TGG 0.693423 7_3:-54466701 Msa1109980:CDS
ATTGCAACCCTCAGACATGG+AGG 0.700300 7_3:+54462998 None:intergenic
GGAGCCGTCATCGTTTAAGG+CGG 0.708685 7_3:+54476711 None:intergenic
GTTGATTGGCAGCAGCAATG+CGG 0.710019 7_3:-54465043 Msa1109980:CDS
TTTGGAAAGACTATTCTCTG+AGG 0.710555 7_3:-54465141 Msa1109980:CDS
GCTGGGAATTCTACACTCTG+GGG 0.712011 7_3:+54471415 None:intergenic
GTCGATCTAGTGAAGGACGG+AGG 0.712962 7_3:-54468123 Msa1109980:CDS
ATTGTGGGAAGAGTTTCCAG+AGG 0.713773 7_3:-54467872 Msa1109980:CDS
ATTATTCCAGAACTAGCGAG+AGG 0.732068 7_3:+54466781 None:intergenic
CTCACTATTGAAGCTCACCG+GGG 0.736574 7_3:-54463466 Msa1109980:CDS
TGTGGGAAGAGTTTCCAGAG+GGG 0.760282 7_3:-54467870 Msa1109980:CDS
GATGGTGATTACGGTTACGG+TGG 0.765549 7_3:+54476968 None:intergenic
GCTGCTTCTCAAGTTCACGG+GGG 0.781063 7_3:-54464123 Msa1109980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCAAAAATAAATTG+AGG - chr7_3:54464802-54464821 Msa1109980:CDS 10.0%
!!! AGAATTTTAAAATAATACAA+AGG + chr7_3:54466226-54466245 None:intergenic 10.0%
!!! TTTATATCACTAATTTATTT+TGG + chr7_3:54466790-54466809 None:intergenic 10.0%
!!! ATAATGATAATTTTAAAAGT+AGG - chr7_3:54468838-54468857 Msa1109980:intron 10.0%
!! TATAAATATAGCAAATATTT+GGG + chr7_3:54472014-54472033 None:intergenic 10.0%
!! ATATAAATATAGCAAATATT+TGG + chr7_3:54472015-54472034 None:intergenic 10.0%
!!! TTGTCATAATATTAAATTTT+AGG - chr7_3:54474586-54474605 Msa1109980:intron 10.0%
!!! TGTCATAATATTAAATTTTA+GGG - chr7_3:54474587-54474606 Msa1109980:intron 10.0%
!! ATAATTTACAAATAAAGAAA+GGG + chr7_3:54476923-54476942 None:intergenic 10.0%
!! AATAATTTACAAATAAAGAA+AGG + chr7_3:54476924-54476943 None:intergenic 10.0%
!!! TCATTAACATTATTATTTCT+TGG + chr7_3:54463887-54463906 None:intergenic 15.0%
!!! AAATAAGATTTTTGTTGAAA+AGG + chr7_3:54464111-54464130 None:intergenic 15.0%
!!! TTTTTTAGCGTATTTAATAT+TGG + chr7_3:54464698-54464717 None:intergenic 15.0%
!! AATATGAATACACTATTATT+AGG + chr7_3:54465952-54465971 None:intergenic 15.0%
!!! TATTTGTTAAAAAAAGTGTA+TGG + chr7_3:54467286-54467305 None:intergenic 15.0%
!! ATGTATAAACTGAAAAATTA+TGG + chr7_3:54467673-54467692 None:intergenic 15.0%
!!! TTCAAAAATACATTATTTTC+AGG + chr7_3:54467738-54467757 None:intergenic 15.0%
!! ATTTGTACACTTAAAAATTA+TGG - chr7_3:54467797-54467816 Msa1109980:intron 15.0%
!! AATCAAAAACATAAATTGAT+GGG + chr7_3:54468098-54468117 None:intergenic 15.0%
!! TAAGAAAACTTCAAATATAT+CGG - chr7_3:54468191-54468210 Msa1109980:intron 15.0%
!!! TTAGTTTATCTTTCTTTTTT+GGG - chr7_3:54468517-54468536 Msa1109980:intron 15.0%
!! AAATAGCAAAAACTTAATTA+AGG + chr7_3:54469968-54469987 None:intergenic 15.0%
!!! TTAGTGAAATTTTTTCAATT+TGG - chr7_3:54470002-54470021 Msa1109980:intron 15.0%
!! AAATGTAAATATTGTGAAAA+GGG + chr7_3:54470468-54470487 None:intergenic 15.0%
!! AAAATGTAAATATTGTGAAA+AGG + chr7_3:54470469-54470488 None:intergenic 15.0%
!! ATAGTTTATCATAAAAGAAA+AGG + chr7_3:54471234-54471253 None:intergenic 15.0%
!!! TTTTATGATAAACTATTACT+TGG - chr7_3:54471238-54471257 Msa1109980:intron 15.0%
!!! ATTTTGATTTTTGATAATTC+AGG + chr7_3:54471489-54471508 None:intergenic 15.0%
!!! TTATGATGATTTTTTTCATT+TGG + chr7_3:54471525-54471544 None:intergenic 15.0%
!!! TATAAGATATTTTACTGAAA+TGG - chr7_3:54472708-54472727 Msa1109980:intron 15.0%
!! ATTGACTAATATTAAAGATA+CGG - chr7_3:54472849-54472868 Msa1109980:intron 15.0%
!! CTTAATTGAGTTAAAAAAAA+AGG + chr7_3:54473817-54473836 None:intergenic 15.0%
!!! ATATTATGACAATTTTAACA+TGG + chr7_3:54474578-54474597 None:intergenic 15.0%
!!! TTGATGTTAATGATATTTTA+TGG - chr7_3:54474863-54474882 Msa1109980:intron 15.0%
!! ATTATTATCATGAAACTTAA+CGG + chr7_3:54475180-54475199 None:intergenic 15.0%
!!! AAAGAATTAAACTTTAGAAA+AGG + chr7_3:54475338-54475357 None:intergenic 15.0%
!!! TTTTCTAAAGTTTAATTCTT+TGG - chr7_3:54475337-54475356 Msa1109980:intron 15.0%
!! TTAGAACATATTTATTTGAT+TGG - chr7_3:54475563-54475582 Msa1109980:intron 15.0%
!!! TTAGGAAATTTGAATTTTGT+AGG - chr7_3:54463425-54463444 Msa1109980:CDS 20.0%
!!! GAATTTTGTAGGAAAAAAAA+AGG - chr7_3:54463436-54463455 Msa1109980:CDS 20.0%
!!! AGGAAAAAAAAAGGATTTTT+AGG - chr7_3:54463445-54463464 Msa1109980:CDS 20.0%
!!! GGAAAAAAAAAGGATTTTTA+GGG - chr7_3:54463446-54463465 Msa1109980:CDS 20.0%
!!! TTTATTCCTTTTCACATTAA+CGG + chr7_3:54463680-54463699 None:intergenic 20.0%
!!! TAAGATTTTACGATTCAAAT+CGG + chr7_3:54464011-54464030 None:intergenic 20.0%
!!! AATATTTCAAGTGAGATTTA+AGG - chr7_3:54464196-54464215 Msa1109980:intron 20.0%
!! ATAAAGATACCAAACTTAAA+TGG + chr7_3:54464382-54464401 None:intergenic 20.0%
!! AGTTTGGTATCTTTATATAT+TGG - chr7_3:54464386-54464405 Msa1109980:intron 20.0%
!! TAATACGTAAGATTGTAATA+GGG + chr7_3:54465163-54465182 None:intergenic 20.0%
!!! AAGAAAGAGAAACTTTATTT+TGG - chr7_3:54465317-54465336 Msa1109980:CDS 20.0%
!!! TTTAATTTAATATTCTGCTG+TGG - chr7_3:54465546-54465565 Msa1109980:intron 20.0%
!!! TTTTGATTTTTTTTTCTCCA+TGG - chr7_3:54465849-54465868 Msa1109980:CDS 20.0%
!!! GTACTATAAGTTCATATTTT+TGG - chr7_3:54465875-54465894 Msa1109980:CDS 20.0%
!! AAATTCAGTTACAATTGATT+TGG + chr7_3:54466025-54466044 None:intergenic 20.0%
!!! TTTTAAAATTCTGCAAGTTT+AGG - chr7_3:54466234-54466253 Msa1109980:CDS 20.0%
!! AAAAAGTTTATATTCAGATG+AGG + chr7_3:54466420-54466439 None:intergenic 20.0%
!! TTATTTATTGGATAACTAGT+TGG + chr7_3:54466669-54466688 None:intergenic 20.0%
!!! TAATTTATTTTGGAGACAAT+GGG + chr7_3:54466780-54466799 None:intergenic 20.0%
!! AGTGATATAAAAGATGAAAA+TGG - chr7_3:54466799-54466818 Msa1109980:CDS 20.0%
!! GTGATATAAAAGATGAAAAT+GGG - chr7_3:54466800-54466819 Msa1109980:CDS 20.0%
!! AGTGATATAAAAGATGAAAA+TGG - chr7_3:54466799-54466818 Msa1109980:CDS 20.0%
!! GTGATATAAAAGATGAAAAT+GGG - chr7_3:54466800-54466819 Msa1109980:CDS 20.0%
!!! TTATGCCTTTTATTTTTCTA+AGG - chr7_3:54466995-54467014 Msa1109980:CDS 20.0%
!!! TATGCCTTTTATTTTTCTAA+GGG - chr7_3:54466996-54467015 Msa1109980:CDS 20.0%
!! AATATGAAAATTTGATTCCT+GGG + chr7_3:54467309-54467328 None:intergenic 20.0%
!! AAATATGAAAATTTGATTCC+TGG + chr7_3:54467310-54467329 None:intergenic 20.0%
!! TAGTTAGAGTTAAATTATTC+CGG + chr7_3:54467516-54467535 None:intergenic 20.0%
!!! ATTTTTGAACACAATTTAGA+TGG - chr7_3:54467749-54467768 Msa1109980:intron 20.0%
!! ATTGAATTTCAACATCAAAT+TGG + chr7_3:54467947-54467966 None:intergenic 20.0%
!! ATCAAAAACATAAATTGATG+GGG + chr7_3:54468097-54468116 None:intergenic 20.0%
!! CAATCAAAAACATAAATTGA+TGG + chr7_3:54468099-54468118 None:intergenic 20.0%
!!! GTTAGTTTATCTTTCTTTTT+TGG - chr7_3:54468516-54468535 Msa1109980:intron 20.0%
!!! TAGTTTATCTTTCTTTTTTG+GGG - chr7_3:54468518-54468537 Msa1109980:intron 20.0%
!! TGTATACATCATTATTGTTT+AGG - chr7_3:54468697-54468716 Msa1109980:CDS 20.0%
!! GTATACATCATTATTGTTTA+GGG - chr7_3:54468698-54468717 Msa1109980:CDS 20.0%
!!! ATTATGTAATTTGTTCATTG+AGG - chr7_3:54468729-54468748 Msa1109980:intron 20.0%
!!! TTATGTAATTTGTTCATTGA+GGG - chr7_3:54468730-54468749 Msa1109980:intron 20.0%
!! AAAATAAACCATGGAAATTT+AGG + chr7_3:54469242-54469261 None:intergenic 20.0%
!! ATTCTGATGATAAAGTTTAT+TGG + chr7_3:54469520-54469539 None:intergenic 20.0%
!! TTTATCAAAATTCTTTCAGA+AGG + chr7_3:54470045-54470064 None:intergenic 20.0%
!!! TGTCTCAATTATTTTATTAC+TGG - chr7_3:54470224-54470243 Msa1109980:intron 20.0%
!!! GTCTCAATTATTTTATTACT+GGG - chr7_3:54470225-54470244 Msa1109980:intron 20.0%
!!! TCTCAATTATTTTATTACTG+GGG - chr7_3:54470226-54470245 Msa1109980:intron 20.0%
!! CTGTTGTATTATATGATAAT+TGG - chr7_3:54470706-54470725 Msa1109980:CDS 20.0%
!! AAGATAGAGAATATAAAAAG+AGG - chr7_3:54471126-54471145 Msa1109980:intron 20.0%
!! AGATAGAGAATATAAAAAGA+GGG - chr7_3:54471127-54471146 Msa1109980:intron 20.0%
!! TTAATTGGTTAAAATTCACA+TGG - chr7_3:54471344-54471363 Msa1109980:intron 20.0%
!! TAATTGGTTAAAATTCACAT+GGG - chr7_3:54471345-54471364 Msa1109980:intron 20.0%
!!! TTTCTAGATGATTAATGTTT+TGG - chr7_3:54472035-54472054 Msa1109980:intron 20.0%
!! TTATATCAGAACTTAGAAAA+AGG - chr7_3:54472458-54472477 Msa1109980:intron 20.0%
!! TCTTTAATATTAGTCAATGA+TGG + chr7_3:54472847-54472866 None:intergenic 20.0%
!! TTGACTAATATTAAAGATAC+GGG - chr7_3:54472850-54472869 Msa1109980:intron 20.0%
!! CAATTATATATACTTGATTG+AGG + chr7_3:54473660-54473679 None:intergenic 20.0%
!! CTCAATCAAGTATATATAAT+TGG - chr7_3:54473658-54473677 Msa1109980:intron 20.0%
!! TGTTAAAAGAATAAACTTGA+AGG - chr7_3:54474085-54474104 Msa1109980:intron 20.0%
!! GTTAAAAGAATAAACTTGAA+GGG - chr7_3:54474086-54474105 Msa1109980:intron 20.0%
!! CACTAAAATTGAACAAATAT+TGG + chr7_3:54474153-54474172 None:intergenic 20.0%
!!! TAGCATTCTTAATTTTATAG+AGG - chr7_3:54474226-54474245 Msa1109980:intron 20.0%
!!! ACTGGAATTTCTAATTTTAT+AGG - chr7_3:54474265-54474284 Msa1109980:intron 20.0%
!!! TTTCTAATTTTATAGGCAAT+AGG - chr7_3:54474272-54474291 Msa1109980:intron 20.0%
!!! ATGTTAATGATATTTTATGG+TGG - chr7_3:54474866-54474885 Msa1109980:intron 20.0%
!!! ATGTATTGTCTTTGTATTTT+AGG - chr7_3:54475636-54475655 Msa1109980:intron 20.0%
!! CAAATCAATCTCATTAATTA+AGG + chr7_3:54475802-54475821 None:intergenic 20.0%
!! AGATACTAAATTGATCAATA+TGG + chr7_3:54475919-54475938 None:intergenic 20.0%
!!! TCGTAATTTTTTTATATCTG+TGG - chr7_3:54476155-54476174 Msa1109980:intron 20.0%
!! ACAGGAATGAAAAATAATTA+TGG + chr7_3:54476886-54476905 None:intergenic 20.0%
!! ACTTGAATTTAATTACATGT+TGG + chr7_3:54477055-54477074 None:intergenic 20.0%
!!! TTTTTCTCTCTTCTGAAAAT+GGG + chr7_3:54462744-54462763 None:intergenic 25.0%
!!! TTTTTTCTCTCTTCTGAAAA+TGG + chr7_3:54462745-54462764 None:intergenic 25.0%
! GAAAAAAAAAAAACACTCTC+TGG - chr7_3:54462758-54462777 Msa1109980:three_prime_UTR 25.0%
! AACTATAAGAACAGTTGATT+GGG + chr7_3:54462977-54462996 None:intergenic 25.0%
! TTGAAGTTTCTATCAAACAA+GGG - chr7_3:54463507-54463526 Msa1109980:CDS 25.0%
!! AAGATTTTACGATTCAAATC+GGG + chr7_3:54464010-54464029 None:intergenic 25.0%
! GATAATAAACCAATCAGATT+TGG + chr7_3:54464746-54464765 None:intergenic 25.0%
! GAAAAAAACTCGAGTAAAAT+TGG + chr7_3:54464790-54464809 None:intergenic 25.0%
! AAATAAATTGAGGCTTATTG+AGG - chr7_3:54464812-54464831 Msa1109980:CDS 25.0%
! TAATACGTAAGATCATAACA+AGG + chr7_3:54465085-54465104 None:intergenic 25.0%
! TAATTACCTAGGATTGAATT+GGG + chr7_3:54465120-54465139 None:intergenic 25.0%
! ATAATTACCTAGGATTGAAT+TGG + chr7_3:54465121-54465140 None:intergenic 25.0%
! GTAATACGTAAGATTGTAAT+AGG + chr7_3:54465164-54465183 None:intergenic 25.0%
!! TATAAAAACCACTAGTGTTT+TGG + chr7_3:54465399-54465418 None:intergenic 25.0%
!! TTTTCTATAGGACAGAAAAA+AGG + chr7_3:54465440-54465459 None:intergenic 25.0%
!! TTTTTCTGTCCTATAGAAAA+AGG - chr7_3:54465440-54465459 Msa1109980:intron 25.0%
!! TTTATGCTACCTTTTTCTAT+AGG + chr7_3:54465452-54465471 None:intergenic 25.0%
!!! AGCATAAACTGCTTATTTTA+CGG - chr7_3:54465464-54465483 Msa1109980:intron 25.0%
!! TATTTTACGGTTACCTATTT+TGG - chr7_3:54465477-54465496 Msa1109980:intron 25.0%
!! ATTTTACGGTTACCTATTTT+GGG - chr7_3:54465478-54465497 Msa1109980:intron 25.0%
! AAATCAAAAACAAACGAGAT+CGG + chr7_3:54465838-54465857 None:intergenic 25.0%
!! TTCAGTTAATGTTTGGATTT+TGG - chr7_3:54465910-54465929 Msa1109980:intron 25.0%
!! TCAATTGTAACTGAATTTTC+TGG - chr7_3:54466027-54466046 Msa1109980:CDS 25.0%
!! TACTCAAAACAGTTAAGTTT+TGG + chr7_3:54466160-54466179 None:intergenic 25.0%
!!! AAAACTTAACTGTTTTGAGT+AGG - chr7_3:54466159-54466178 Msa1109980:CDS 25.0%
!!! CTAATTTATTTTGGAGACAA+TGG + chr7_3:54466781-54466800 None:intergenic 25.0%
! ATATAAAAGATGAAAATGGG+AGG - chr7_3:54466803-54466822 Msa1109980:CDS 25.0%
! ATATAAAAGATGAAAATGGG+AGG - chr7_3:54466803-54466822 Msa1109980:CDS 25.0%
! AAAAAATGATGTGCAATCTT+TGG - chr7_3:54466873-54466892 Msa1109980:CDS 25.0%
! AAAATTAGAGTGACAAGTAT+GGG - chr7_3:54466903-54466922 Msa1109980:CDS 25.0%
!!! CGCAATATATTCATTTTTCA+TGG + chr7_3:54466957-54466976 None:intergenic 25.0%
!!! ATGCCTTTTATTTTTCTAAG+GGG - chr7_3:54466997-54467016 Msa1109980:CDS 25.0%
! TTGAGAAAAAAACTATTCCT+GGG - chr7_3:54467098-54467117 Msa1109980:intron 25.0%
! AAATCTATGCAGAATATCAT+GGG + chr7_3:54467213-54467232 None:intergenic 25.0%
! TAAATCTATGCAGAATATCA+TGG + chr7_3:54467214-54467233 None:intergenic 25.0%
!!! ACTTTTTTTAACAAATACCC+AGG - chr7_3:54467289-54467308 Msa1109980:intron 25.0%
!! ATTTTCATATTTTCATTCCC+AGG - chr7_3:54467318-54467337 Msa1109980:intron 25.0%
! TATCTATTTATCAGAGAATC+CGG - chr7_3:54467494-54467513 Msa1109980:intron 25.0%
!!! TTTTACGGATTTGAAATCAA+TGG + chr7_3:54467544-54467563 None:intergenic 25.0%
!! TATTAACTGGGAACATTTTA+CGG + chr7_3:54467559-54467578 None:intergenic 25.0%
! GTTAATGATGTTCAAAATCA+GGG + chr7_3:54467651-54467670 None:intergenic 25.0%
! TTATACATGAACACAAATTG+TGG - chr7_3:54467685-54467704 Msa1109980:intron 25.0%
! ACACAATTTAGATGGTTAAT+AGG - chr7_3:54467757-54467776 Msa1109980:intron 25.0%
! TATAATGACGTTCAAAATTG+TGG - chr7_3:54467821-54467840 Msa1109980:CDS 25.0%
!! GATGGTTAATGAACATTTTA+AGG + chr7_3:54467884-54467903 None:intergenic 25.0%
! AATTTCAACATCAAATTGGA+TGG + chr7_3:54467943-54467962 None:intergenic 25.0%
! TTATTGATAAGCTTCATGAA+TGG - chr7_3:54468271-54468290 Msa1109980:intron 25.0%
! TGTTATGTGAAACATTCTAT+AGG + chr7_3:54468478-54468497 None:intergenic 25.0%
!!! AGTTTATCTTTCTTTTTTGG+GGG - chr7_3:54468519-54468538 Msa1109980:intron 25.0%
! AAAAACAAAGACCATAGTTT+GGG + chr7_3:54468613-54468632 None:intergenic 25.0%
! AACGCAAAAAATAATAGATC+AGG + chr7_3:54468768-54468787 None:intergenic 25.0%
!! GTTTTATGTATTTTGTCTCT+AGG - chr7_3:54469026-54469045 Msa1109980:CDS 25.0%
! TAAAAGAGACCAACTAAAAT+TGG + chr7_3:54469287-54469306 None:intergenic 25.0%
! TTCTAATACCATTGTTATGT+TGG - chr7_3:54469934-54469953 Msa1109980:CDS 25.0%
! TCATCATACAAGTATAACTA+TGG + chr7_3:54470312-54470331 None:intergenic 25.0%
! TACAAGTATGAGTATAACTA+CGG + chr7_3:54470344-54470363 None:intergenic 25.0%
! TTGTAGAAAAACAACACAAT+CGG + chr7_3:54470373-54470392 None:intergenic 25.0%
!!! ATATTTACATTTTGAAGCCA+TGG - chr7_3:54470476-54470495 Msa1109980:intron 25.0%
!!! TATTTACATTTTGAAGCCAT+GGG - chr7_3:54470477-54470496 Msa1109980:intron 25.0%
!! CCTACACAGAATTTTTAATA+GGG + chr7_3:54471198-54471217 None:intergenic 25.0%
! TTCATCAAACTCTCTTTAAT+TGG - chr7_3:54471329-54471348 Msa1109980:intron 25.0%
!! TGATTGGTTAAAATTCACAT+GGG + chr7_3:54471411-54471430 None:intergenic 25.0%
!! TTGATTGGTTAAAATTCACA+TGG + chr7_3:54471412-54471431 None:intergenic 25.0%
!!! ATGTGAATTTTAACCAATCA+AGG - chr7_3:54471411-54471430 Msa1109980:CDS 25.0%
! CAAAAATCAAAATTGTGCAA+TGG - chr7_3:54471496-54471515 Msa1109980:CDS 25.0%
! ATATACAATAGTGTCAATGA+AGG - chr7_3:54471552-54471571 Msa1109980:intron 25.0%
! TACTGATACTGTTTGTTTAT+TGG - chr7_3:54472369-54472388 Msa1109980:intron 25.0%
! TTCTGATATAACTAGCTATT+AGG + chr7_3:54472449-54472468 None:intergenic 25.0%
!!! AGTTTTTTTGTTTGATGGTT+GGG - chr7_3:54472626-54472645 Msa1109980:intron 25.0%
! TGTCTTTATAGTATTATGTG+TGG - chr7_3:54472677-54472696 Msa1109980:intron 25.0%
! GTCTTTATAGTATTATGTGT+GGG - chr7_3:54472678-54472697 Msa1109980:intron 25.0%
!! TTTATCAAAGAATTAGTCTG+AGG + chr7_3:54472817-54472836 None:intergenic 25.0%
! AATATTAGTCAATGATGGTA+AGG + chr7_3:54472842-54472861 None:intergenic 25.0%
!!! AATTCTAAAGTAATTCGTGA+TGG - chr7_3:54472958-54472977 Msa1109980:intron 25.0%
!!! ATTCTAAAGTAATTCGTGAT+GGG - chr7_3:54472959-54472978 Msa1109980:intron 25.0%
! AGTATATATAATTGGAGTTG+TGG - chr7_3:54473666-54473685 Msa1109980:intron 25.0%
! GTATATATAATTGGAGTTGT+GGG - chr7_3:54473667-54473686 Msa1109980:intron 25.0%
! TAACAAATCCAATTGCTAAA+TGG - chr7_3:54473904-54473923 Msa1109980:intron 25.0%
! AACAAATCCAATTGCTAAAT+GGG - chr7_3:54473905-54473924 Msa1109980:intron 25.0%
!!! CAATAACATTGTTACTTTAG+TGG - chr7_3:54474022-54474041 Msa1109980:CDS 25.0%
! ACTGTTAAGTAAGAAACATA+TGG - chr7_3:54474047-54474066 Msa1109980:CDS 25.0%
!! TCTTAATTTTATAGAGGCTT+AGG - chr7_3:54474232-54474251 Msa1109980:intron 25.0%
! TCTTTGAATATGTTTGGATT+AGG - chr7_3:54474780-54474799 Msa1109980:intron 25.0%
! CTTTGAATATGTTTGGATTA+GGG - chr7_3:54474781-54474800 Msa1109980:intron 25.0%
!! TTTGAATATGTTTGGATTAG+GGG - chr7_3:54474782-54474801 Msa1109980:intron 25.0%
!!! AGAGTTCTATTTTAGAACAT+CGG + chr7_3:54474826-54474845 None:intergenic 25.0%
! TAATAATTTGAGTATAGAGC+AGG + chr7_3:54475029-54475048 None:intergenic 25.0%
!! TATTTTCTTAGAGCTCTTAA+CGG - chr7_3:54475131-54475150 Msa1109980:intron 25.0%
!! ACAGTACATGTACATAATTT+TGG + chr7_3:54475204-54475223 None:intergenic 25.0%
! CTTACTATAAGATGAATTGA+GGG + chr7_3:54475429-54475448 None:intergenic 25.0%
!!! TTATAGTAAGCCTTTAAGAT+TGG - chr7_3:54475439-54475458 Msa1109980:intron 25.0%
!!! TATAGTAAGCCTTTAAGATT+GGG - chr7_3:54475440-54475459 Msa1109980:intron 25.0%
! AAGACAATACATAAATCGAA+GGG + chr7_3:54475628-54475647 None:intergenic 25.0%
! AAAGACAATACATAAATCGA+AGG + chr7_3:54475629-54475648 None:intergenic 25.0%
! TATCAACAATGATGTTTCTT+AGG - chr7_3:54476025-54476044 Msa1109980:intron 25.0%
!!! GTAATGAATTTTATTTGACG+TGG - chr7_3:54476199-54476218 Msa1109980:intron 25.0%
! GATTTCTTATATCAAGGAAT+TGG + chr7_3:54476281-54476300 None:intergenic 25.0%
! TGCTATGATTTCTTATATCA+AGG + chr7_3:54476287-54476306 None:intergenic 25.0%
! GTGAATACATCTGAAAATAT+TGG - chr7_3:54476718-54476737 Msa1109980:CDS 25.0%
! ATACATCTGAAAATATTGGT+AGG - chr7_3:54476722-54476741 Msa1109980:CDS 25.0%
! TACATCTGAAAATATTGGTA+GGG - chr7_3:54476723-54476742 Msa1109980:CDS 25.0%
TTAGGAATCAATCATGAGAT+TGG + chr7_3:54462905-54462924 None:intergenic 30.0%
! AATCTCATGATTGATTCCTA+AGG - chr7_3:54462904-54462923 Msa1109980:three_prime_UTR 30.0%
! ATCTCATGATTGATTCCTAA+GGG - chr7_3:54462905-54462924 Msa1109980:three_prime_UTR 30.0%
GAACTATAAGAACAGTTGAT+TGG + chr7_3:54462978-54462997 None:intergenic 30.0%
AGGAACAGAACTATTGAAAT+CGG + chr7_3:54463094-54463113 None:intergenic 30.0%
!!! CACCAATGAGTTTTTTTATG+CGG - chr7_3:54463355-54463374 Msa1109980:CDS 30.0%
TGTGAGTAGAAATTTGTGTT+AGG - chr7_3:54463407-54463426 Msa1109980:CDS 30.0%
!! ACACTATTTCTATTCCACAA+AGG + chr7_3:54463482-54463501 None:intergenic 30.0%
CTTGAAGTTTCTATCAAACA+AGG - chr7_3:54463506-54463525 Msa1109980:CDS 30.0%
! CAGAGTAGAACTTTTATGAA+TGG - chr7_3:54463791-54463810 Msa1109980:intron 30.0%
TTCTTGGACAGATAGAAATA+TGG + chr7_3:54463871-54463890 None:intergenic 30.0%
TGGTAGTTTAAATCCTGATT+TGG - chr7_3:54463956-54463975 Msa1109980:intron 30.0%
ACAAAAATAGCATCCAAATC+AGG + chr7_3:54463972-54463991 None:intergenic 30.0%
!!! TGATTTGGATGCTATTTTTG+TGG - chr7_3:54463971-54463990 Msa1109980:intron 30.0%
TTTGCGATTATGATTTCACT+CGG - chr7_3:54464035-54464054 Msa1109980:intron 30.0%
! ATTTTATGCACAATCGGAAA+GGG + chr7_3:54464332-54464351 None:intergenic 30.0%
ATACCAAACTTAAATGGAAG+TGG + chr7_3:54464376-54464395 None:intergenic 30.0%
CTAAAAACTGAGCTGAAAAT+GGG - chr7_3:54464409-54464428 Msa1109980:intron 30.0%
AATAAACCAATCAGATTTGG+TGG + chr7_3:54464743-54464762 None:intergenic 30.0%
TGGTTATTTAGTGTGTATAC+TGG + chr7_3:54465049-54465068 None:intergenic 30.0%
AATTACCTAGGATTGAATTG+GGG + chr7_3:54465119-54465138 None:intergenic 30.0%
TCAATCCTAGGTAATTATTC+TGG - chr7_3:54465123-54465142 Msa1109980:CDS 30.0%
ATTATTCTGGTAGGATCTTA+CGG - chr7_3:54465136-54465155 Msa1109980:CDS 30.0%
AAGTCTTCATAAGGATAATC+AGG + chr7_3:54465294-54465313 None:intergenic 30.0%
TTTCTTCACAAGTCTTCATA+AGG + chr7_3:54465303-54465322 None:intergenic 30.0%
TCATGAATACAGCAAGAAAT+TGG + chr7_3:54465353-54465372 None:intergenic 30.0%
! TTTTACGGTTACCTATTTTG+GGG - chr7_3:54465479-54465498 Msa1109980:intron 30.0%
TCATCTGCACAACAAAATTA+GGG + chr7_3:54465700-54465719 None:intergenic 30.0%
TTCATCTGCACAACAAAATT+AGG + chr7_3:54465701-54465720 None:intergenic 30.0%
GATATCTTTATTACATCTGG+TGG + chr7_3:54465770-54465789 None:intergenic 30.0%
GGAGATATCTTTATTACATC+TGG + chr7_3:54465773-54465792 None:intergenic 30.0%
TGAACTTATAGTACAAACCA+TGG + chr7_3:54465869-54465888 None:intergenic 30.0%
CTTCATGTTCAGTTAATGTT+TGG - chr7_3:54465903-54465922 Msa1109980:intron 30.0%
GATTTGGATTTATCAGCATT+TGG + chr7_3:54466009-54466028 None:intergenic 30.0%
!!! AGAGTTTTGTTCCATTACAA+TGG - chr7_3:54466562-54466581 Msa1109980:CDS 30.0%
!!! GAGTTTTGTTCCATTACAAT+GGG - chr7_3:54466563-54466582 Msa1109980:CDS 30.0%
AAGGGTGACGATTTATTTAT+TGG + chr7_3:54466681-54466700 None:intergenic 30.0%
GAAAATTAGAGTGACAAGTA+TGG - chr7_3:54466902-54466921 Msa1109980:CDS 30.0%
!!! TGCCTTTTATTTTTCTAAGG+GGG - chr7_3:54466998-54467017 Msa1109980:CDS 30.0%
CTCAACTTCATAACAAACAT+GGG + chr7_3:54467083-54467102 None:intergenic 30.0%
TCTCAACTTCATAACAAACA+TGG + chr7_3:54467084-54467103 None:intergenic 30.0%
GTTGAGAAAAAAACTATTCC+TGG - chr7_3:54467097-54467116 Msa1109980:intron 30.0%
! ATGGGAATAATGGAAGTTAT+GGG + chr7_3:54467153-54467172 None:intergenic 30.0%
GAATAAACTCATGGGAATAA+TGG + chr7_3:54467163-54467182 None:intergenic 30.0%
TTACATGGGAATAAACTCAT+GGG + chr7_3:54467171-54467190 None:intergenic 30.0%
TTTACATGGGAATAAACTCA+TGG + chr7_3:54467172-54467191 None:intergenic 30.0%
TTTATTCCCATGTAAAGAGA+TGG - chr7_3:54467176-54467195 Msa1109980:intron 30.0%
TTATTCCCATGTAAAGAGAT+GGG - chr7_3:54467177-54467196 Msa1109980:intron 30.0%
! TTGTAACTTCCAATTTTCTC+AGG - chr7_3:54467244-54467263 Msa1109980:intron 30.0%
TTTGACATTCCTGAGAAAAT+TGG + chr7_3:54467256-54467275 None:intergenic 30.0%
ATAGCAGCACTATATTAACT+GGG + chr7_3:54467571-54467590 None:intergenic 30.0%
TATAGCAGCACTATATTAAC+TGG + chr7_3:54467572-54467591 None:intergenic 30.0%
GGTTAATGATGTTCAAAATC+AGG + chr7_3:54467652-54467671 None:intergenic 30.0%
!! TTATGTTTTTGATTGCTCTG+CGG - chr7_3:54468104-54468123 Msa1109980:CDS 30.0%
TTGAATGAATACCTGAATGA+AGG + chr7_3:54468148-54468167 None:intergenic 30.0%
AAGACAAGCTGTAAATACAT+CGG + chr7_3:54468391-54468410 None:intergenic 30.0%
GATACTAGGCAAGAATTAAT+GGG + chr7_3:54468454-54468473 None:intergenic 30.0%
TGATACTAGGCAAGAATTAA+TGG + chr7_3:54468455-54468474 None:intergenic 30.0%
AACATTCTATAGGTGATACT+AGG + chr7_3:54468468-54468487 None:intergenic 30.0%
GTTTCACATAACAAACTTTC+AGG - chr7_3:54468485-54468504 Msa1109980:intron 30.0%
!!! GTTTATCTTTCTTTTTTGGG+GGG - chr7_3:54468520-54468539 Msa1109980:intron 30.0%
GATGCATGGAATTTCAAATA+AGG - chr7_3:54468555-54468574 Msa1109980:intron 30.0%
! GTATTAGTTTACCCAAACTA+TGG - chr7_3:54468599-54468618 Msa1109980:intron 30.0%
CAAAAACAAAGACCATAGTT+TGG + chr7_3:54468614-54468633 None:intergenic 30.0%
!!! TTGCGTTAACTTATTTTAGC+TGG - chr7_3:54468781-54468800 Msa1109980:intron 30.0%
TGGAAATTTAGGAAGTCATT+AGG + chr7_3:54469231-54469250 None:intergenic 30.0%
AATGACTTCCTAAATTTCCA+TGG - chr7_3:54469231-54469250 Msa1109980:intron 30.0%
!! TTGCAACAACCAATTTTAGT+TGG - chr7_3:54469275-54469294 Msa1109980:intron 30.0%
ATTACCTGAAATTCTGCATT+AGG + chr7_3:54469626-54469645 None:intergenic 30.0%
!! TCTGATATTCTGCTTTTACT+AGG - chr7_3:54469687-54469706 Msa1109980:intron 30.0%
! AGTTAACAGCATTTGAAGTT+TGG - chr7_3:54469805-54469824 Msa1109980:intron 30.0%
AACAGTAACCAACATAACAA+TGG + chr7_3:54469945-54469964 None:intergenic 30.0%
ATTCCCAATAACATCTCTAT+TGG + chr7_3:54470160-54470179 None:intergenic 30.0%
! TTATCCTGACTCAATCTTTT+TGG - chr7_3:54470419-54470438 Msa1109980:CDS 30.0%
TAAACCAAAAAGATTGAGTC+AGG + chr7_3:54470426-54470445 None:intergenic 30.0%
CTAGGAAGATTTCTTGATAT+GGG - chr7_3:54470606-54470625 Msa1109980:CDS 30.0%
GATACGAGTTTCTTATATGT+AGG - chr7_3:54470728-54470747 Msa1109980:CDS 30.0%
TATATGTAGGCATTATCTGT+TGG - chr7_3:54470741-54470760 Msa1109980:intron 30.0%
GACAGATTCTTGTATTCATA+TGG - chr7_3:54470814-54470833 Msa1109980:intron 30.0%
ACATGTTCTGCAACAAATTA+AGG + chr7_3:54470912-54470931 None:intergenic 30.0%
TCAAAGCAGAAATTTCAACA+TGG + chr7_3:54471012-54471031 None:intergenic 30.0%
ACAATTGAGCAACTTCATAT+TGG + chr7_3:54471169-54471188 None:intergenic 30.0%
CCCTATTAAAAATTCTGTGT+AGG - chr7_3:54471195-54471214 Msa1109980:intron 30.0%
! GCCTACACAGAATTTTTAAT+AGG + chr7_3:54471199-54471218 None:intergenic 30.0%
ATGTGGGTCCTATATAAATA+TGG - chr7_3:54471380-54471399 Msa1109980:CDS 30.0%
CATTGACACTATTGTATATC+AGG + chr7_3:54471551-54471570 None:intergenic 30.0%
!! ATTGATGATTTTCCATTGCT+GGG - chr7_3:54471620-54471639 Msa1109980:intron 30.0%
! TATGAAGTTTCTTGATAGCT+CGG - chr7_3:54471693-54471712 Msa1109980:intron 30.0%
CCTGAGAAAAACAAATTACA+CGG + chr7_3:54472082-54472101 None:intergenic 30.0%
! TGATGATGATGACAAGTTTA+GGG - chr7_3:54472184-54472203 Msa1109980:intron 30.0%
TTTCATGTTCCAATGATTAG+AGG - chr7_3:54472345-54472364 Msa1109980:intron 30.0%
TTCATGTTCCAATGATTAGA+GGG - chr7_3:54472346-54472365 Msa1109980:intron 30.0%
CAGATAATGAAGAATTTCTC+AGG + chr7_3:54472417-54472436 None:intergenic 30.0%
CAAAAAATTCCATTTCAACG+AGG - chr7_3:54472523-54472542 Msa1109980:intron 30.0%
!!! TAGCCAGTTTTTTTGTTTGA+TGG - chr7_3:54472621-54472640 Msa1109980:intron 30.0%
CAACCATCAAACAAAAAAAC+TGG + chr7_3:54472627-54472646 None:intergenic 30.0%
!!! CAGTTTTTTTGTTTGATGGT+TGG - chr7_3:54472625-54472644 Msa1109980:intron 30.0%
ACTAATATTAAAGATACGGG+TGG - chr7_3:54472853-54472872 Msa1109980:intron 30.0%
TTCTAAACAGAACCAACATA+TGG - chr7_3:54472882-54472901 Msa1109980:intron 30.0%
AGTATTGTTTCACCTCAAAT+TGG - chr7_3:54472913-54472932 Msa1109980:intron 30.0%
GAATACAATGCATTGTCTAA+AGG + chr7_3:54473126-54473145 None:intergenic 30.0%
CACTTGTTCAATACCTATTA+TGG + chr7_3:54473226-54473245 None:intergenic 30.0%
!! CATAATAGGTATTGAACAAG+TGG - chr7_3:54473224-54473243 Msa1109980:CDS 30.0%
! TCTTCTTGGTTTGATATGAA+TGG - chr7_3:54473318-54473337 Msa1109980:intron 30.0%
!!! CTCTCTGCATCATTTTTTTA+TGG - chr7_3:54473405-54473424 Msa1109980:intron 30.0%
AAAATGACAAAATTCTCAGC+TGG + chr7_3:54473862-54473881 None:intergenic 30.0%
TTTATGTCCCATTTAGCAAT+TGG + chr7_3:54473915-54473934 None:intergenic 30.0%
AATTGCTAAATGGGACATAA+AGG - chr7_3:54473914-54473933 Msa1109980:intron 30.0%
ATTGCTAAATGGGACATAAA+GGG - chr7_3:54473915-54473934 Msa1109980:intron 30.0%
ATGAAGATTCTCAGATATAG+AGG - chr7_3:54474185-54474204 Msa1109980:intron 30.0%
!! ACTAGTTTAGAGTACTTTTC+TGG - chr7_3:54474309-54474328 Msa1109980:intron 30.0%
! AATCATGATTTTCCTGACAA+AGG - chr7_3:54474458-54474477 Msa1109980:intron 30.0%
GTCTCTTCTTTGAATATGTT+TGG - chr7_3:54474774-54474793 Msa1109980:intron 30.0%
!!! TCTATTTTAGAACATCGGTA+GGG + chr7_3:54474821-54474840 None:intergenic 30.0%
!!! TTCTATTTTAGAACATCGGT+AGG + chr7_3:54474822-54474841 None:intergenic 30.0%
! ATTTTCTTAGAGCTCTTAAC+GGG - chr7_3:54475132-54475151 Msa1109980:intron 30.0%
ACTAGAAGCCTTAAAAGTTA+CGG - chr7_3:54475292-54475311 Msa1109980:intron 30.0%
GCTTACTATAAGATGAATTG+AGG + chr7_3:54475430-54475449 None:intergenic 30.0%
!! ATAGTAAGCCTTTAAGATTG+GGG - chr7_3:54475441-54475460 Msa1109980:intron 30.0%
TTGAATACCCACAAAACTTT+GGG - chr7_3:54475515-54475534 Msa1109980:intron 30.0%
TCCATCATTATGAAAACTCA+TGG - chr7_3:54475767-54475786 Msa1109980:intron 30.0%
! ACCATGAGTTTTCATAATGA+TGG + chr7_3:54475771-54475790 None:intergenic 30.0%
TACAAGTTTGAACTTAGACT+TGG + chr7_3:54475896-54475915 None:intergenic 30.0%
ACAGAGAGTAGAAAAAGTTA+TGG - chr7_3:54476074-54476093 Msa1109980:intron 30.0%
CAGAGAGTAGAAAAAGTTAT+GGG - chr7_3:54476075-54476094 Msa1109980:intron 30.0%
GTAGAAAAAGTTATGGGAAT+TGG - chr7_3:54476081-54476100 Msa1109980:intron 30.0%
! TTTATGCATTTTCCTTCAGT+TGG - chr7_3:54476230-54476249 Msa1109980:intron 30.0%
GAAAACCTTAATGAGTTGTT+TGG + chr7_3:54476397-54476416 None:intergenic 30.0%
CAGCAAGTAGTAATTGATAT+GGG + chr7_3:54476509-54476528 None:intergenic 30.0%
!! TTTTGCTTGAGTATTGTCAT+CGG + chr7_3:54476565-54476584 None:intergenic 30.0%
AATCTTCAAGGGAAAAAATG+TGG + chr7_3:54476593-54476612 None:intergenic 30.0%
AACATCGATGAAATCTTCAA+GGG + chr7_3:54476604-54476623 None:intergenic 30.0%
ACAACTGCGATAAATATGTA+TGG + chr7_3:54476663-54476682 None:intergenic 30.0%
ACATCTGAAAATATTGGTAG+GGG - chr7_3:54476724-54476743 Msa1109980:CDS 30.0%
!! ATGTAGTTTCTGTTGACTTT+GGG - chr7_3:54477015-54477034 Msa1109980:five_prime_UTR 30.0%
! TCTCTTCTGAAAATGGGAAA+CGG + chr7_3:54462738-54462757 None:intergenic 35.0%
! TTTGAGGTGAATATCGGAAT+AGG + chr7_3:54462853-54462872 None:intergenic 35.0%
!!! TGGTGTTTTGAGGTGAATAT+CGG + chr7_3:54462859-54462878 None:intergenic 35.0%
ATCAATCATGAGATTGGTGA+TGG + chr7_3:54462899-54462918 None:intergenic 35.0%
! TTTCCGATTTGAATGGCATT+GGG - chr7_3:54462928-54462947 Msa1109980:three_prime_UTR 35.0%
! AATGGCATTGGGAGATTTAA+TGG - chr7_3:54462939-54462958 Msa1109980:three_prime_UTR 35.0%
! TCAATAGTTCTGTTCCTAAC+CGG - chr7_3:54463097-54463116 Msa1109980:three_prime_UTR 35.0%
AGTAGTAGTGTAGGTGTTTA+TGG - chr7_3:54463147-54463166 Msa1109980:three_prime_UTR 35.0%
CACCGCATAAAAAAACTCAT+TGG + chr7_3:54463360-54463379 None:intergenic 35.0%
AGTTTCTATCAAACAAGGGT+TGG - chr7_3:54463511-54463530 Msa1109980:CDS 35.0%
GTTTCTATCAAACAAGGGTT+GGG - chr7_3:54463512-54463531 Msa1109980:CDS 35.0%
TTGGATCCGTTAATGTGAAA+AGG - chr7_3:54463671-54463690 Msa1109980:intron 35.0%
TGTGAAAAGGAATAAAGTGC+TGG - chr7_3:54463684-54463703 Msa1109980:CDS 35.0%
! GTGAAAAGGAATAAAGTGCT+GGG - chr7_3:54463685-54463704 Msa1109980:CDS 35.0%
! AATCAAGAGACTGAGTTTTG+TGG - chr7_3:54463727-54463746 Msa1109980:CDS 35.0%
!!! GCTATTTTTGTGGAATTCGA+TGG - chr7_3:54463981-54464000 Msa1109980:intron 35.0%
CTATTTGGAAACGAAACAGA+TGG + chr7_3:54464142-54464161 None:intergenic 35.0%
AACATGAGTGTGAAGCTATT+TGG + chr7_3:54464157-54464176 None:intergenic 35.0%
! GATTTTATGCACAATCGGAA+AGG + chr7_3:54464333-54464352 None:intergenic 35.0%
TCCGATTGTGCATAAAATCT+CGG - chr7_3:54464334-54464353 Msa1109980:intron 35.0%
! ACCGAGATTTTATGCACAAT+CGG + chr7_3:54464338-54464357 None:intergenic 35.0%
GCTAAAAACTGAGCTGAAAA+TGG - chr7_3:54464408-54464427 Msa1109980:intron 35.0%
!! AAGTAGTGATTTCTGAAACG+AGG - chr7_3:54464458-54464477 Msa1109980:intron 35.0%
AGGTAGTATATCACACGAAT+GGG - chr7_3:54464558-54464577 Msa1109980:intron 35.0%
TAGTTTCTTACGTTGGCAAT+AGG - chr7_3:54464588-54464607 Msa1109980:intron 35.0%
AGTTTCTTACGTTGGCAATA+GGG - chr7_3:54464589-54464608 Msa1109980:intron 35.0%
ATAGGGTAAGTTGCTTACAA+TGG - chr7_3:54464606-54464625 Msa1109980:intron 35.0%
TAGGGTAAGTTGCTTACAAT+GGG - chr7_3:54464607-54464626 Msa1109980:intron 35.0%
TTCTGCATACACAAAAGTCT+GGG + chr7_3:54464928-54464947 None:intergenic 35.0%
TTTCTGCATACACAAAAGTC+TGG + chr7_3:54464929-54464948 None:intergenic 35.0%
! TTTTGTGTATGCAGAAAACC+TGG - chr7_3:54464932-54464951 Msa1109980:intron 35.0%
AGGAGCTATGTTGTTAATCT+CGG - chr7_3:54464957-54464976 Msa1109980:intron 35.0%
ATGTTGTTAATCTCGGATAG+CGG - chr7_3:54464964-54464983 Msa1109980:intron 35.0%
AACAAGGATTGCAGAATCTA+TGG + chr7_3:54465069-54465088 None:intergenic 35.0%
TCCTAGGTAATTATTCTGGT+AGG - chr7_3:54465127-54465146 Msa1109980:CDS 35.0%
TCCTACCAGAATAATTACCT+AGG + chr7_3:54465131-54465150 None:intergenic 35.0%
ATATTGCCTACAATCGAGAA+CGG + chr7_3:54465198-54465217 None:intergenic 35.0%
ATCTCGATCTTGACAACATT+TGG - chr7_3:54465216-54465235 Msa1109980:intron 35.0%
CTTGACAACATTTGGTACAT+CGG - chr7_3:54465224-54465243 Msa1109980:intron 35.0%
!! TTTACGGTTACCTATTTTGG+GGG - chr7_3:54465480-54465499 Msa1109980:intron 35.0%
AAAATGCTGGTATGTCTTCA+TGG + chr7_3:54465602-54465621 None:intergenic 35.0%
TAGAAGCTGCTATAAAATGC+TGG + chr7_3:54465615-54465634 None:intergenic 35.0%
CATCTGCACAACAAAATTAG+GGG + chr7_3:54465699-54465718 None:intergenic 35.0%
AAAAACAAACGAGATCGGAA+AGG + chr7_3:54465833-54465852 None:intergenic 35.0%
!! AACTGAATTTTCTGGCAGTA+AGG - chr7_3:54466035-54466054 Msa1109980:CDS 35.0%
ACAAGCAGAGTGGATAAAAT+TGG + chr7_3:54466132-54466151 None:intergenic 35.0%
! ATTCTGCAAGTTTAGGACTA+TGG - chr7_3:54466241-54466260 Msa1109980:CDS 35.0%
!! AGAAGGCATTAGAGTTGATT+GGG - chr7_3:54466333-54466352 Msa1109980:intron 35.0%
AAGCTAAACATTCTGACCTT+TGG + chr7_3:54466392-54466411 None:intergenic 35.0%
! TTTTTCACCTCATCCAATGT+TGG + chr7_3:54466505-54466524 None:intergenic 35.0%
ATGTCGTAGATATGCAAAGT+CGG - chr7_3:54466537-54466556 Msa1109980:CDS 35.0%
! AACACATAATGGGGAACTTT+GGG - chr7_3:54466603-54466622 Msa1109980:CDS 35.0%
CACCCCCTTAGAAAAATAAA+AGG + chr7_3:54467003-54467022 None:intergenic 35.0%
AGGTTAAGAATGACATTCTC+AGG - chr7_3:54467032-54467051 Msa1109980:CDS 35.0%
ATTCTCAGGAATACATGACT+AGG - chr7_3:54467046-54467065 Msa1109980:intron 35.0%
TTCTCAGGAATACATGACTA+GGG - chr7_3:54467047-54467066 Msa1109980:intron 35.0%
! CATGGGAATAATGGAAGTTA+TGG + chr7_3:54467154-54467173 None:intergenic 35.0%
ACATTCCCATCTCTTTACAT+GGG + chr7_3:54467185-54467204 None:intergenic 35.0%
TTGAAGACGGAATATCTTAG+GGG + chr7_3:54467388-54467407 None:intergenic 35.0%
CTTGAAGACGGAATATCTTA+GGG + chr7_3:54467389-54467408 None:intergenic 35.0%
ACCTCTATTATGCTTGAAGA+CGG + chr7_3:54467401-54467420 None:intergenic 35.0%
GCATAATAGAGGTAGATATC+AGG - chr7_3:54467408-54467427 Msa1109980:intron 35.0%
TAGAGGTAGATATCAGGAAA+AGG - chr7_3:54467414-54467433 Msa1109980:intron 35.0%
! CTGCTATAGCTGCTATTTAA+CGG - chr7_3:54467584-54467603 Msa1109980:CDS 35.0%
! TTGTGGTTAATTTTGTGCAG+CGG - chr7_3:54467838-54467857 Msa1109980:CDS 35.0%
ATGTGGTTAATTACGTTCAG+CGG + chr7_3:54467906-54467925 None:intergenic 35.0%
CGTAATTAACCACATTTGCA+CGG - chr7_3:54467911-54467930 Msa1109980:CDS 35.0%
TCAAGATCATTGAGTGGTAA+GGG + chr7_3:54468060-54468079 None:intergenic 35.0%
ATCAAGATCATTGAGTGGTA+AGG + chr7_3:54468061-54468080 None:intergenic 35.0%
TCTTACCACACCTATAAAGA+TGG - chr7_3:54468407-54468426 Msa1109980:intron 35.0%
CACATAACAAACTTTCAGGA+AGG - chr7_3:54468489-54468508 Msa1109980:intron 35.0%
! GCATGCTTTTCTAATGTTAG+TGG - chr7_3:54468577-54468596 Msa1109980:intron 35.0%
GGTTAGTAAGGAATCACTAT+GGG + chr7_3:54468637-54468656 None:intergenic 35.0%
AGGTTAGTAAGGAATCACTA+TGG + chr7_3:54468638-54468657 None:intergenic 35.0%
!! TCTGACTGCTTTTATCTAGT+GGG - chr7_3:54468657-54468676 Msa1109980:intron 35.0%
!!! CTTTTTTTCGTCACTAACCT+TGG - chr7_3:54468878-54468897 Msa1109980:intron 35.0%
TCACAATTTCTCTCTAGACT+TGG - chr7_3:54468927-54468946 Msa1109980:intron 35.0%
CACAATTTCTCTCTAGACTT+GGG - chr7_3:54468928-54468947 Msa1109980:intron 35.0%
TTACTTATAGACAAGATCCC+TGG - chr7_3:54469088-54469107 Msa1109980:intron 35.0%
ATTCACCAAGAAGAGTCTTT+CGG + chr7_3:54469126-54469145 None:intergenic 35.0%
CTCTTCTTGGTGAATTGAAT+TGG - chr7_3:54469131-54469150 Msa1109980:intron 35.0%
AGGAAGTCATTAGGAAGAAT+GGG + chr7_3:54469222-54469241 None:intergenic 35.0%
TAGGAAGTCATTAGGAAGAA+TGG + chr7_3:54469223-54469242 None:intergenic 35.0%
TTGGTTGTTGCAAAATACCT+GGG + chr7_3:54469268-54469287 None:intergenic 35.0%
ATTGGTTGTTGCAAAATACC+TGG + chr7_3:54469269-54469288 None:intergenic 35.0%
ATACCACATATGATGCTGAT+GGG + chr7_3:54469464-54469483 None:intergenic 35.0%
AATACCACATATGATGCTGA+TGG + chr7_3:54469465-54469484 None:intergenic 35.0%
AGCATCATATGTGGTATTGT+TGG - chr7_3:54469467-54469486 Msa1109980:intron 35.0%
CTAATGAAGGAAGTTGAGAA+AGG + chr7_3:54469595-54469614 None:intergenic 35.0%
TCAACTTCCTTCATTAGTTG+AGG - chr7_3:54469598-54469617 Msa1109980:intron 35.0%
TTAGGATCCTCAACTAATGA+AGG + chr7_3:54469608-54469627 None:intergenic 35.0%
ACCTTACCTGATGAAGTATA+TGG - chr7_3:54469746-54469765 Msa1109980:intron 35.0%
TGCTCGGTAAAAAATGTACT+AGG + chr7_3:54469786-54469805 None:intergenic 35.0%
TTCAAATGCTGTTAACTGCT+CGG + chr7_3:54469802-54469821 None:intergenic 35.0%
TGATGTACCTGAAGAACTAT+AGG + chr7_3:54469873-54469892 None:intergenic 35.0%
TACATCACATGTCTTAGTCT+TGG - chr7_3:54469886-54469905 Msa1109980:intron 35.0%
TACTTCGGAATCTAGACATA+TGG + chr7_3:54470100-54470119 None:intergenic 35.0%
TAGATTCCGAAGTAGTAATG+CGG - chr7_3:54470106-54470125 Msa1109980:intron 35.0%
TCAGCCAATAGAGATGTTAT+TGG - chr7_3:54470153-54470172 Msa1109980:intron 35.0%
CAGCCAATAGAGATGTTATT+GGG - chr7_3:54470154-54470173 Msa1109980:intron 35.0%
TGATTGCAAAGCAATTTGAG+AGG + chr7_3:54470202-54470221 None:intergenic 35.0%
GAGAAAGCGAAATAATTCCT+GGG + chr7_3:54470271-54470290 None:intergenic 35.0%
AGAGAAAGCGAAATAATTCC+TGG + chr7_3:54470272-54470291 None:intergenic 35.0%
ATTTCGCTTTCTCTCTATTC+TGG - chr7_3:54470278-54470297 Msa1109980:intron 35.0%
! AATGCCAAACAATTTTCCCA+TGG + chr7_3:54470496-54470515 None:intergenic 35.0%
GACTAAGTAAAACCTGAAAC+AGG + chr7_3:54470557-54470576 None:intergenic 35.0%
!! AAATCTTCCTAGGAGTACTA+AGG + chr7_3:54470598-54470617 None:intergenic 35.0%
CCATATCAAGAAATCTTCCT+AGG + chr7_3:54470608-54470627 None:intergenic 35.0%
CCTAGGAAGATTTCTTGATA+TGG - chr7_3:54470605-54470624 Msa1109980:CDS 35.0%
ACAAGAATCTGTCTTAGTTC+TGG + chr7_3:54470807-54470826 None:intergenic 35.0%
!!! GAACATGTTATTTTTCCCGT+CGG - chr7_3:54471073-54471092 Msa1109980:intron 35.0%
AAGAGGGAAATAAACATCAC+TGG - chr7_3:54471143-54471162 Msa1109980:intron 35.0%
! TATTGATTGAATGCCTGAAG+AGG - chr7_3:54471274-54471293 Msa1109980:intron 35.0%
TATATAGGACCCACATGATT+TGG + chr7_3:54471376-54471395 None:intergenic 35.0%
!! CATTGATGATTTTCCATTGC+TGG - chr7_3:54471619-54471638 Msa1109980:intron 35.0%
!!! TTTTGTTTTGGCTGTGATTG+TGG - chr7_3:54471747-54471766 Msa1109980:intron 35.0%
TTTCCAGAGGGGAAAATAAT+CGG - chr7_3:54471922-54471941 Msa1109980:intron 35.0%
ATATTTGGGTAGTAAACCTC+TGG + chr7_3:54472000-54472019 None:intergenic 35.0%
!!! CCGTGTAATTTGTTTTTCTC+AGG - chr7_3:54472079-54472098 Msa1109980:intron 35.0%
ATCAAATCCCACATCAACAA+GGG + chr7_3:54472135-54472154 None:intergenic 35.0%
AATCAAATCCCACATCAACA+AGG + chr7_3:54472136-54472155 None:intergenic 35.0%
! TTTGATTCGTGTAGAAGTGT+TGG - chr7_3:54472149-54472168 Msa1109980:intron 35.0%
! GTGATGATGATGACAAGTTT+AGG - chr7_3:54472183-54472202 Msa1109980:intron 35.0%
TATCAGTACCCTCTAATCAT+TGG + chr7_3:54472357-54472376 None:intergenic 35.0%
TCCATTTCAACGAGGAAAAA+AGG - chr7_3:54472531-54472550 Msa1109980:intron 35.0%
!!! ACCTTTTTTCCTCGTTGAAA+TGG + chr7_3:54472535-54472554 None:intergenic 35.0%
TTATAGTATTATGTGTGGGC+TGG - chr7_3:54472682-54472701 Msa1109980:intron 35.0%
AATCTATTGCTGCTGCATAT+TGG - chr7_3:54472788-54472807 Msa1109980:intron 35.0%
AATATTAAAGATACGGGTGG+TGG - chr7_3:54472856-54472875 Msa1109980:intron 35.0%
GATTCAGGAATACTGAATGA+TGG - chr7_3:54473063-54473082 Msa1109980:intron 35.0%
AATGCATTGTCTAAAGGCTT+TGG + chr7_3:54473120-54473139 None:intergenic 35.0%
!! TGTACTTGCTATGTGTACTT+TGG - chr7_3:54473152-54473171 Msa1109980:intron 35.0%
! TCTTGGTTTGATATGAATGG+TGG - chr7_3:54473321-54473340 Msa1109980:intron 35.0%
TTAACCTTTCCAATGCTGTT+TGG - chr7_3:54473372-54473391 Msa1109980:intron 35.0%
TAAATGTCACCAAACAGCAT+TGG + chr7_3:54473384-54473403 None:intergenic 35.0%
ACATAAAAGACAATAGCAGC+AGG + chr7_3:54473439-54473458 None:intergenic 35.0%
TTTATAATTGCATGCTGCTC+TGG - chr7_3:54473458-54473477 Msa1109980:CDS 35.0%
GAGTATGTTCATTGGAGTTT+AGG - chr7_3:54473556-54473575 Msa1109980:intron 35.0%
TGCAGCAGTTAAAAGTGATT+TGG + chr7_3:54473700-54473719 None:intergenic 35.0%
!!! AGAAGTTTTAGCTAGAAGAG+AGG - chr7_3:54473731-54473750 Msa1109980:intron 35.0%
TTATTCTGTCAGCTGTTAGT+AGG - chr7_3:54473880-54473899 Msa1109980:intron 35.0%
GAATAAACTTGAAGGGCTAA+AGG - chr7_3:54474093-54474112 Msa1109980:intron 35.0%
TGAGCTGTAACAAATTGCTA+AGG - chr7_3:54474116-54474135 Msa1109980:intron 35.0%
GAGCTGTAACAAATTGCTAA+GGG - chr7_3:54474117-54474136 Msa1109980:intron 35.0%
ATTCTCAGATATAGAGGCTT+AGG - chr7_3:54474191-54474210 Msa1109980:intron 35.0%
GGCAATAGGAATTATGTGTT+TGG - chr7_3:54474286-54474305 Msa1109980:intron 35.0%
AGCTTAGAAATTCCTTTGTC+AGG + chr7_3:54474473-54474492 None:intergenic 35.0%
TTTGGAAAGACTATTCTCTG+AGG - chr7_3:54474640-54474659 Msa1109980:intron 35.0%
TTGGAAAGACTATTCTCTGA+GGG - chr7_3:54474641-54474660 Msa1109980:intron 35.0%
ACTGCATTCTCTTCAATTCA+TGG - chr7_3:54474681-54474700 Msa1109980:intron 35.0%
CTGCATTCTCTTCAATTCAT+GGG - chr7_3:54474682-54474701 Msa1109980:intron 35.0%
TATGTACATGTACTGTCACT+TGG - chr7_3:54475208-54475227 Msa1109980:intron 35.0%
! CAACAAAGCCGTAACTTTTA+AGG + chr7_3:54475303-54475322 None:intergenic 35.0%
AAGGGCAAAGTATGACATTA+GGG + chr7_3:54475367-54475386 None:intergenic 35.0%
GTTGAATACCCACAAAACTT+TGG - chr7_3:54475514-54475533 Msa1109980:intron 35.0%
AATACATAAATCGAAGGGCT+CGG + chr7_3:54475623-54475642 None:intergenic 35.0%
ATGTTCTTATGCATCTGACA+TGG - chr7_3:54475856-54475875 Msa1109980:intron 35.0%
ATGTTTCTTAGGCTTGTATG+TGG - chr7_3:54476036-54476055 Msa1109980:intron 35.0%
! TTAGGCTTGTATGTGGATTA+CGG - chr7_3:54476043-54476062 Msa1109980:intron 35.0%
ACACTTTCTTTACCTTTCCA+GGG + chr7_3:54476125-54476144 None:intergenic 35.0%
TACTCACTGAATTTCTGCTA+TGG + chr7_3:54476182-54476201 None:intergenic 35.0%
TTCTGCCAAACAACTCATTA+AGG - chr7_3:54476389-54476408 Msa1109980:intron 35.0%
! ATTAAGGTTTTCAGCCTTGA+GGG - chr7_3:54476405-54476424 Msa1109980:intron 35.0%
TAGAGTAGGATAGTAACGAA+TGG + chr7_3:54476445-54476464 None:intergenic 35.0%
TCGTTACTATCCTACTCTAA+TGG - chr7_3:54476446-54476465 Msa1109980:intron 35.0%
CAAGTAGTAATTGATATGGG+TGG + chr7_3:54476506-54476525 None:intergenic 35.0%
GCAGCAAGTAGTAATTGATA+TGG + chr7_3:54476510-54476529 None:intergenic 35.0%
! TATCAATTACTACTTGCTGC+TGG - chr7_3:54476510-54476529 Msa1109980:CDS 35.0%
GAACATCGATGAAATCTTCA+AGG + chr7_3:54476605-54476624 None:intergenic 35.0%
TGTTTGATATTCTTCTCAGC+TGG + chr7_3:54476629-54476648 None:intergenic 35.0%
ATTGGTAGGGGTAAATTATC+TGG - chr7_3:54476736-54476755 Msa1109980:CDS 35.0%
! ACGAAGATGACCTTATTTGT+CGG + chr7_3:54476839-54476858 None:intergenic 35.0%
! TGATGATTGACTCCTGTAAA+CGG - chr7_3:54476977-54476996 Msa1109980:five_prime_UTR 35.0%
!! GATGTAGTTTCTGTTGACTT+TGG - chr7_3:54477014-54477033 Msa1109980:five_prime_UTR 35.0%
TTACATGTTGGTCAAAGCAA+AGG + chr7_3:54477043-54477062 None:intergenic 35.0%
! GATAACGGTGATGGTGATTA+CGG + chr7_3:54462825-54462844 None:intergenic 40.0%
TCGGAATAGGATGGTGATAA+CGG + chr7_3:54462840-54462859 None:intergenic 40.0%
AGGTGAATATCGGAATAGGA+TGG + chr7_3:54462849-54462868 None:intergenic 40.0%
!! TGATGGTTTTTCGAAACCCT+AGG + chr7_3:54462882-54462901 None:intergenic 40.0%
CATTCAAATCGGAAACCCTT+AGG + chr7_3:54462923-54462942 None:intergenic 40.0%
! CTAAGGGTTTCCGATTTGAA+TGG - chr7_3:54462921-54462940 Msa1109980:three_prime_UTR 40.0%
! GTTTCCGATTTGAATGGCAT+TGG - chr7_3:54462927-54462946 Msa1109980:three_prime_UTR 40.0%
TCTCCCAATGCCATTCAAAT+CGG + chr7_3:54462934-54462953 None:intergenic 40.0%
TCATTGAAGAAACTCGTCTG+CGG + chr7_3:54463201-54463220 None:intergenic 40.0%
!! ATAGTGGTTTGGTCTCGAAA+TGG - chr7_3:54463268-54463287 Msa1109980:CDS 40.0%
! GAAAAGCATACCCTATCCTT+CGG + chr7_3:54463297-54463316 None:intergenic 40.0%
AGGGTTATTGTTTGCCTTTG+TGG - chr7_3:54463465-54463484 Msa1109980:CDS 40.0%
!! CAGAAGTGTTAGTTCTACAC+AGG - chr7_3:54463647-54463666 Msa1109980:intron 40.0%
!! GTGTTAGTTCTACACAGGTT+TGG - chr7_3:54463652-54463671 Msa1109980:intron 40.0%
!! AAAAGGAATAAAGTGCTGGG+CGG - chr7_3:54463688-54463707 Msa1109980:CDS 40.0%
TTCGCTTTACTGATCTCTAG+AGG - chr7_3:54463824-54463843 Msa1109980:intron 40.0%
TCGCTTTACTGATCTCTAGA+GGG - chr7_3:54463825-54463844 Msa1109980:intron 40.0%
ATGATAGTTGACACGTGCAT+TGG - chr7_3:54463929-54463948 Msa1109980:intron 40.0%
AAATCTCGGTTTCAACTACC+TGG - chr7_3:54464348-54464367 Msa1109980:intron 40.0%
! GCACCACTTCCATTTAAGTT+TGG - chr7_3:54464370-54464389 Msa1109980:intron 40.0%
TGTGATATACTACCTCCTAG+GGG + chr7_3:54464553-54464572 None:intergenic 40.0%
GTGTGATATACTACCTCCTA+GGG + chr7_3:54464554-54464573 None:intergenic 40.0%
GAGGTAGTATATCACACGAA+TGG - chr7_3:54464557-54464576 Msa1109980:intron 40.0%
TAGTATATCACACGAATGGG+AGG - chr7_3:54464561-54464580 Msa1109980:intron 40.0%
AGTATATCACACGAATGGGA+GGG - chr7_3:54464562-54464581 Msa1109980:intron 40.0%
GTAAGTTGCTTACAATGGGA+GGG - chr7_3:54464611-54464630 Msa1109980:intron 40.0%
!! AACCAATCAGATTTGGTGGA+AGG + chr7_3:54464739-54464758 None:intergenic 40.0%
TGTCTGAATCTCTTACCACT+CGG + chr7_3:54464882-54464901 None:intergenic 40.0%
TGTATGCAGAAAACCTGGTT+AGG - chr7_3:54464937-54464956 Msa1109980:intron 40.0%
TAACAACATAGCTCCTAACC+AGG + chr7_3:54464953-54464972 None:intergenic 40.0%
! TATACCGCTATAGCGGTTTT+CGG + chr7_3:54465003-54465022 None:intergenic 40.0%
! CGGTATAGCAGCTACTTTAA+AGG - chr7_3:54465016-54465035 Msa1109980:intron 40.0%
TATTGCCTACAATCGAGAAC+GGG + chr7_3:54465197-54465216 None:intergenic 40.0%
GTATTGTGCCAAAACACTAG+TGG - chr7_3:54465388-54465407 Msa1109980:intron 40.0%
TTTAATATTCTGCTGTGGCG+AGG - chr7_3:54465551-54465570 Msa1109980:intron 40.0%
TTAATATTCTGCTGTGGCGA+GGG - chr7_3:54465552-54465571 Msa1109980:intron 40.0%
! TTTGTTGTGCAGATGAAGAC+AGG - chr7_3:54465704-54465723 Msa1109980:intron 40.0%
! AACTGCACACTGTTTTACAC+TGG - chr7_3:54466063-54466082 Msa1109980:CDS 40.0%
TCTGCAGCATTAGAAAAGCA+AGG + chr7_3:54466293-54466312 None:intergenic 40.0%
! TGCTGCAGATCCTTTTTCTA+TGG - chr7_3:54466304-54466323 Msa1109980:intron 40.0%
!! TTCTGTGGTGCCATAGAAAA+AGG + chr7_3:54466317-54466336 None:intergenic 40.0%
! TTTTTCTATGGCACCACAGA+AGG - chr7_3:54466316-54466335 Msa1109980:intron 40.0%
ATCAACTCTAATGCCTTCTG+TGG + chr7_3:54466332-54466351 None:intergenic 40.0%
!! CAGAAGGCATTAGAGTTGAT+TGG - chr7_3:54466332-54466351 Msa1109980:intron 40.0%
TGACCAGTCAGTATGAAAGA+TGG - chr7_3:54466363-54466382 Msa1109980:intron 40.0%
TTGCCATCTTTCATACTGAC+TGG + chr7_3:54466369-54466388 None:intergenic 40.0%
GTATGAAAGATGGCAACCAA+AGG - chr7_3:54466373-54466392 Msa1109980:intron 40.0%
TTATAGCGTGCCTGTAAACA+TGG + chr7_3:54466469-54466488 None:intergenic 40.0%
GTGTCAACTTGATCCAACAT+TGG - chr7_3:54466489-54466508 Msa1109980:CDS 40.0%
ACTTGATCCAACATTGGATG+AGG - chr7_3:54466495-54466514 Msa1109980:CDS 40.0%
TTGTTCCATTACAATGGGCA+TGG - chr7_3:54466568-54466587 Msa1109980:CDS 40.0%
TGCCAAAGCCAACACATAAT+GGG - chr7_3:54466593-54466612 Msa1109980:CDS 40.0%
CAAAGTTCCCCATTATGTGT+TGG + chr7_3:54466604-54466623 None:intergenic 40.0%
! CAACACATAATGGGGAACTT+TGG - chr7_3:54466602-54466621 Msa1109980:CDS 40.0%
GGAACTTTGGGTCTTCAATA+AGG - chr7_3:54466615-54466634 Msa1109980:CDS 40.0%
!! AGTTGGTTTGAGAGATGAGA+AGG + chr7_3:54466652-54466671 None:intergenic 40.0%
TGGTGAAAATGTTTGACCAG+TGG - chr7_3:54466706-54466725 Msa1109980:CDS 40.0%
AAAATGTTTGACCAGTGGAC+AGG - chr7_3:54466711-54466730 Msa1109980:CDS 40.0%
AAATGTTTGACCAGTGGACA+GGG - chr7_3:54466712-54466731 Msa1109980:CDS 40.0%
TTAGAGTGACAAGTATGGGA+TGG - chr7_3:54466907-54466926 Msa1109980:CDS 40.0%
TGACAAGTATGGGATGGAAA+CGG - chr7_3:54466913-54466932 Msa1109980:CDS 40.0%
TTCCTGGGTATAAAAGTTCC+TGG - chr7_3:54467113-54467132 Msa1109980:intron 40.0%
TCCTGGGTATAAAAGTTCCT+GGG - chr7_3:54467114-54467133 Msa1109980:intron 40.0%
CACATTCCCATCTCTTTACA+TGG + chr7_3:54467186-54467205 None:intergenic 40.0%
ATTCCCAGGTATGTTATTCC+TGG - chr7_3:54467332-54467351 Msa1109980:intron 40.0%
TTCCCAGGTATGTTATTCCT+GGG - chr7_3:54467333-54467352 Msa1109980:intron 40.0%
TTCCCAGGAATAACATACCT+GGG + chr7_3:54467338-54467357 None:intergenic 40.0%
ATTCCCAGGAATAACATACC+TGG + chr7_3:54467339-54467358 None:intergenic 40.0%
GGGAAACACAAATTATTCCC+AGG + chr7_3:54467353-54467372 None:intergenic 40.0%
TGAAGACGGAATATCTTAGG+GGG + chr7_3:54467387-54467406 None:intergenic 40.0%
GCTTGAAGACGGAATATCTT+AGG + chr7_3:54467390-54467409 None:intergenic 40.0%
TCCGTCTTCAAGCATAATAG+AGG - chr7_3:54467397-54467416 Msa1109980:intron 40.0%
AGGTAGATATCAGGAAAAGG+AGG - chr7_3:54467417-54467436 Msa1109980:intron 40.0%
ATATCAGGAAAAGGAGGACT+GGG - chr7_3:54467423-54467442 Msa1109980:intron 40.0%
CAAGATCATTGAGTGGTAAG+GGG + chr7_3:54468059-54468078 None:intergenic 40.0%
CAGGAATCAAGATCATTGAG+TGG + chr7_3:54468066-54468085 None:intergenic 40.0%
CACTCAATGATCTTGATTCC+TGG - chr7_3:54468064-54468083 Msa1109980:CDS 40.0%
AGTTGTGAATGCCTTCATTC+AGG - chr7_3:54468134-54468153 Msa1109980:CDS 40.0%
! AAGCTGTAAATACATCGGCT+GGG + chr7_3:54468386-54468405 None:intergenic 40.0%
CAATGCCATCTTTATAGGTG+TGG + chr7_3:54468415-54468434 None:intergenic 40.0%
CATCGCAATGCCATCTTTAT+AGG + chr7_3:54468420-54468439 None:intergenic 40.0%
CTATAAAGATGGCATTGCGA+TGG - chr7_3:54468418-54468437 Msa1109980:intron 40.0%
GGTAAAATGATGCAGATGCA+TGG - chr7_3:54468541-54468560 Msa1109980:intron 40.0%
AAAGCAGTCAGAGGTTAGTA+AGG + chr7_3:54468649-54468668 None:intergenic 40.0%
CACTAGATAAAAGCAGTCAG+AGG + chr7_3:54468658-54468677 None:intergenic 40.0%
!! CTCTGACTGCTTTTATCTAG+TGG - chr7_3:54468656-54468675 Msa1109980:intron 40.0%
CTAGTGGGATTTCATGATGA+CGG - chr7_3:54468672-54468691 Msa1109980:intron 40.0%
TTTCGTCACTAACCTTGGTA+TGG - chr7_3:54468883-54468902 Msa1109980:intron 40.0%
GATGCATAACTTCCATACCA+AGG + chr7_3:54468898-54468917 None:intergenic 40.0%
AGAAGAGTCTTTCGGTCATT+TGG + chr7_3:54469118-54469137 None:intergenic 40.0%
AATGACCGAAAGACTCTTCT+TGG - chr7_3:54469118-54469137 Msa1109980:intron 40.0%
CAGTAACTGATACGATTGCA+TGG - chr7_3:54469164-54469183 Msa1109980:CDS 40.0%
GGAAGTCATTAGGAAGAATG+GGG + chr7_3:54469221-54469240 None:intergenic 40.0%
! CCTGGGTTGAAAATAAACCA+TGG + chr7_3:54469251-54469270 None:intergenic 40.0%
!! CCATGGTTTATTTTCAACCC+AGG - chr7_3:54469248-54469267 Msa1109980:intron 40.0%
! AGTCTCTGAAAAAGATCTGC+AGG + chr7_3:54469331-54469350 None:intergenic 40.0%
! TTTTCAGAGACTGTTCAGAC+AGG - chr7_3:54469339-54469358 Msa1109980:intron 40.0%
! ATGTTTTCAATCCATGCTGC+AGG - chr7_3:54469540-54469559 Msa1109980:intron 40.0%
! TGTTTTCAATCCATGCTGCA+GGG - chr7_3:54469541-54469560 Msa1109980:intron 40.0%
GGATCCTAATGCAGAATTTC+AGG - chr7_3:54469619-54469638 Msa1109980:intron 40.0%
CCAAGGAAACTTTACATCAG+AGG + chr7_3:54469666-54469685 None:intergenic 40.0%
CCTCTGATGTAAAGTTTCCT+TGG - chr7_3:54469663-54469682 Msa1109980:intron 40.0%
AAAGCAGAATATCAGAGCCA+AGG + chr7_3:54469683-54469702 None:intergenic 40.0%
GCCATATACTTCATCAGGTA+AGG + chr7_3:54469750-54469769 None:intergenic 40.0%
GAACAGCCATATACTTCATC+AGG + chr7_3:54469755-54469774 None:intergenic 40.0%
GTTTCTTATGCTCAGAACCA+TGG + chr7_3:54469836-54469855 None:intergenic 40.0%
AAGAACTATAGGCAGCTGTT+CGG + chr7_3:54469862-54469881 None:intergenic 40.0%
!! GTCTTAGTCTTGGTTACCTT+TGG - chr7_3:54469896-54469915 Msa1109980:intron 40.0%
!! TACCTTTGGAACCATTGTGT+CGG - chr7_3:54469910-54469929 Msa1109980:intron 40.0%
GGTATTAGAAACCGACACAA+TGG + chr7_3:54469924-54469943 None:intergenic 40.0%
! TTGTTGCAAGTTTTTGACCC+AGG - chr7_3:54470251-54470270 Msa1109980:intron 40.0%
GAGTATAACTACGGAAGCTT+CGG + chr7_3:54470335-54470354 None:intergenic 40.0%
GAAGCCATGGGAAAATTGTT+TGG - chr7_3:54470489-54470508 Msa1109980:intron 40.0%
! AGTAGTTCTGTTCCTGTTTC+AGG - chr7_3:54470542-54470561 Msa1109980:intron 40.0%
ATTTCTTGATATGGGCCCAT+GGG - chr7_3:54470614-54470633 Msa1109980:CDS 40.0%
GCAACAGCTTCAGAACATAA+GGG + chr7_3:54470773-54470792 None:intergenic 40.0%
TGCAACAGCTTCAGAACATA+AGG + chr7_3:54470774-54470793 None:intergenic 40.0%
!! AATCTGTCTTAGTTCTGGTG+TGG + chr7_3:54470802-54470821 None:intergenic 40.0%
AAAGATCCTTGCACTTGACA+AGG - chr7_3:54470839-54470858 Msa1109980:intron 40.0%
! AAAGTACCTTGTCAAGTGCA+AGG + chr7_3:54470848-54470867 None:intergenic 40.0%
!! TGCACTTGACAAGGTACTTT+TGG - chr7_3:54470848-54470867 Msa1109980:intron 40.0%
!! ACTTGACAAGGTACTTTTGG+AGG - chr7_3:54470851-54470870 Msa1109980:intron 40.0%
!!! GTTATTTTTCCCGTCGGATT+TGG - chr7_3:54471079-54471098 Msa1109980:intron 40.0%
AAAATTCTGTGTAGGCAGAC+TGG - chr7_3:54471203-54471222 Msa1109980:intron 40.0%
GGGACTCGCCATATTTATAT+AGG + chr7_3:54471391-54471410 None:intergenic 40.0%
!!! TGCAATGGCTGCTTTTGTTT+TGG - chr7_3:54471735-54471754 Msa1109980:intron 40.0%
ATTGTGGATGGTCATAGAAG+AGG - chr7_3:54471763-54471782 Msa1109980:intron 40.0%
CAGCTTCAATACAAGCTTCT+TGG + chr7_3:54471789-54471808 None:intergenic 40.0%
CAAGAAGCTTGTATTGAAGC+TGG - chr7_3:54471787-54471806 Msa1109980:intron 40.0%
CATTAGGAGATGAACTCTCA+AGG + chr7_3:54471837-54471856 None:intergenic 40.0%
GGCTCAGTTTGTGAATCATT+AGG + chr7_3:54471853-54471872 None:intergenic 40.0%
CAAAGCCATTGAAGGAAAAG+GGG + chr7_3:54471874-54471893 None:intergenic 40.0%
GCAAAGCCATTGAAGGAAAA+GGG + chr7_3:54471875-54471894 None:intergenic 40.0%
AGCAAAGCCATTGAAGGAAA+AGG + chr7_3:54471876-54471895 None:intergenic 40.0%
! AAACCGATTATTTTCCCCTC+TGG + chr7_3:54471928-54471947 None:intergenic 40.0%
!! GGGAAAATAATCGGTTTGCA+GGG - chr7_3:54471931-54471950 Msa1109980:intron 40.0%
GGGCTGAAGTTAGTATAGTT+AGG - chr7_3:54472204-54472223 Msa1109980:intron 40.0%
!! TGTTGAGTGTTGCTTCAGAT+GGG - chr7_3:54472231-54472250 Msa1109980:intron 40.0%
! TAGATTTCAGGTGCTTGTTG+TGG + chr7_3:54472774-54472793 None:intergenic 40.0%
ATGCAGCAGCAATAGATTTC+AGG + chr7_3:54472786-54472805 None:intergenic 40.0%
AGAACCAACATATGGCTCAT+GGG - chr7_3:54472890-54472909 Msa1109980:intron 40.0%
ACCTCAAATTGGTCCTCTAA+GGG - chr7_3:54472924-54472943 Msa1109980:intron 40.0%
! AAATTGGTCCTCTAAGGGTT+GGG - chr7_3:54472929-54472948 Msa1109980:intron 40.0%
! CTAAAGTAATTCGTGATGGG+CGG - chr7_3:54472962-54472981 Msa1109980:intron 40.0%
!! TAAAGTAATTCGTGATGGGC+GGG - chr7_3:54472963-54472982 Msa1109980:intron 40.0%
ATTATTCCAGAACTAGCGAG+AGG + chr7_3:54473003-54473022 None:intergenic 40.0%
!! GCTAGTTCTGGAATAATGCA+CGG - chr7_3:54473006-54473025 Msa1109980:intron 40.0%
!! CTAGTTCTGGAATAATGCAC+GGG - chr7_3:54473007-54473026 Msa1109980:intron 40.0%
AGAGGAATTGTCAGACAATG+GGG + chr7_3:54473034-54473053 None:intergenic 40.0%
GAGAGGAATTGTCAGACAAT+GGG + chr7_3:54473035-54473054 None:intergenic 40.0%
TGAGAGGAATTGTCAGACAA+TGG + chr7_3:54473036-54473055 None:intergenic 40.0%
TCCTCTCATCATTCTGATTC+AGG - chr7_3:54473048-54473067 Msa1109980:intron 40.0%
TCCTGAATCAGAATGATGAG+AGG + chr7_3:54473052-54473071 None:intergenic 40.0%
CTGAATGATGGTTTCAGCAA+TGG - chr7_3:54473075-54473094 Msa1109980:intron 40.0%
AATGGAGTGGTTAACAGCTT+TGG - chr7_3:54473093-54473112 Msa1109980:intron 40.0%
ATGGAGTGGTTAACAGCTTT+GGG - chr7_3:54473094-54473113 Msa1109980:intron 40.0%
GCATTCCAGCTATGTAACTT+GGG + chr7_3:54473533-54473552 None:intergenic 40.0%
CAAGTTACATAGCTGGAATG+CGG - chr7_3:54473532-54473551 Msa1109980:intron 40.0%
! AATGCGGAGAGTATGTTCAT+TGG - chr7_3:54473548-54473567 Msa1109980:intron 40.0%
!! TTTTAGCTAGAAGAGAGGAG+AGG - chr7_3:54473736-54473755 Msa1109980:intron 40.0%
TTTAGCTAGAAGAGAGGAGA+GGG - chr7_3:54473737-54473756 Msa1109980:intron 40.0%
GGAGAGGGAAAAATTTGCAT+TGG - chr7_3:54473752-54473771 Msa1109980:intron 40.0%
ACAACCTTTCTCTCCTATAG+TGG - chr7_3:54473956-54473975 Msa1109980:intron 40.0%
GGCTTAGGAAACTAAACAAC+TGG - chr7_3:54474247-54474266 Msa1109980:intron 40.0%
! CTGCTGTTGACTATGTACTT+TGG - chr7_3:54474380-54474399 Msa1109980:intron 40.0%
!!! TGTACTTTGGTGTTTTGCAC+AGG - chr7_3:54474393-54474412 Msa1109980:intron 40.0%
!!! GTACTTTGGTGTTTTGCACA+GGG - chr7_3:54474394-54474413 Msa1109980:intron 40.0%
TATCATCAAGCTCATTCACC+AGG + chr7_3:54474499-54474518 None:intergenic 40.0%
ATGCAGCTGATGGAAACATT+CGG - chr7_3:54474616-54474635 Msa1109980:intron 40.0%
TGGAAAGACTATTCTCTGAG+GGG - chr7_3:54474642-54474661 Msa1109980:intron 40.0%
TGCCAATCAACAACTGCATT+CGG + chr7_3:54474729-54474748 None:intergenic 40.0%
TAGAACATCGGTAGGGAAAA+TGG + chr7_3:54474814-54474833 None:intergenic 40.0%
ACGCATACTGGTAAATGCAT+TGG + chr7_3:54474906-54474925 None:intergenic 40.0%
ATGCATTTACCAGTATGCGT+CGG - chr7_3:54474906-54474925 Msa1109980:intron 40.0%
AGACGTCATCAATAATGCTG+TGG - chr7_3:54474932-54474951 Msa1109980:intron 40.0%
GACGTCATCAATAATGCTGT+GGG - chr7_3:54474933-54474952 Msa1109980:intron 40.0%
AAGCCGTAGTAAATGAGAGA+GGG + chr7_3:54475248-54475267 None:intergenic 40.0%
TCTCATTTACTACGGCTTCT+TGG - chr7_3:54475250-54475269 Msa1109980:intron 40.0%
CAAGGGCAAAGTATGACATT+AGG + chr7_3:54475368-54475387 None:intergenic 40.0%
AATGTCATACTTTGCCCTTG+CGG - chr7_3:54475368-54475387 Msa1109980:intron 40.0%
ACAAGATCCAAAAACCGCAA+GGG + chr7_3:54475385-54475404 None:intergenic 40.0%
AGATGAATTGAGGGTCAGTT+GGG + chr7_3:54475420-54475439 None:intergenic 40.0%
AAGATGAATTGAGGGTCAGT+TGG + chr7_3:54475421-54475440 None:intergenic 40.0%
!! AGCCTTTAAGATTGGGGATT+TGG - chr7_3:54475447-54475466 Msa1109980:intron 40.0%
!! TGAGCAACCCAAAGTTTTGT+GGG + chr7_3:54475525-54475544 None:intergenic 40.0%
ATACATAAATCGAAGGGCTC+GGG + chr7_3:54475622-54475641 None:intergenic 40.0%
!!! TTTGCAGCTGGTTTTGTAGA+TGG - chr7_3:54475685-54475704 Msa1109980:intron 40.0%
! TGCTTACATTTCAGGTGTTC+TGG + chr7_3:54475731-54475750 None:intergenic 40.0%
TGATGGAAGAATTTCAACCG+AGG + chr7_3:54475754-54475773 None:intergenic 40.0%
! CAGTGACACTTTAAGAAGCA+TGG + chr7_3:54475991-54476010 None:intergenic 40.0%
! TTTTCTACTCTCTGTGTGTG+TGG + chr7_3:54476069-54476088 None:intergenic 40.0%
GACACTTTCTTTACCTTTCC+AGG + chr7_3:54476126-54476145 None:intergenic 40.0%
ATCAAGGAATTGGATATCCC+CGG + chr7_3:54476271-54476290 None:intergenic 40.0%
GTGAGCTTCAATAGTGAGAT+AGG + chr7_3:54476313-54476332 None:intergenic 40.0%
ATCTCACTATTGAAGCTCAC+CGG - chr7_3:54476313-54476332 Msa1109980:intron 40.0%
! CATTAAGGTTTTCAGCCTTG+AGG - chr7_3:54476404-54476423 Msa1109980:intron 40.0%
! ATTTTCTGGGCCATTAGAGT+AGG + chr7_3:54476459-54476478 None:intergenic 40.0%
ACTCTAATGGCCCAGAAAAT+TGG - chr7_3:54476459-54476478 Msa1109980:intron 40.0%
! ACTGGAAGAAAGAAGCATAG+TGG - chr7_3:54476808-54476827 Msa1109980:CDS 40.0%
AGGGTAAATAGCACACAAAC+AGG + chr7_3:54476904-54476923 None:intergenic 40.0%
! GATGATTGACTCCTGTAAAC+GGG - chr7_3:54476978-54476997 Msa1109980:five_prime_UTR 40.0%
GAATGAAAGATCCCGTTTAC+AGG + chr7_3:54476992-54477011 None:intergenic 40.0%
! GGTGATGGTGATTACGGTTA+CGG + chr7_3:54462819-54462838 None:intergenic 45.0%
!! TAGGATGGTGATAACGGTGA+TGG + chr7_3:54462834-54462853 None:intergenic 45.0%
TTCACCTCAAAACACCACCT+AGG - chr7_3:54462862-54462881 Msa1109980:three_prime_UTR 45.0%
TCACCTCAAAACACCACCTA+GGG - chr7_3:54462863-54462882 Msa1109980:three_prime_UTR 45.0%
! AAACCCTAGGTGGTGTTTTG+AGG + chr7_3:54462869-54462888 None:intergenic 45.0%
!! TGGTTTTTCGAAACCCTAGG+TGG + chr7_3:54462879-54462898 None:intergenic 45.0%
GAATCGTCACGGTGATGATT+AGG + chr7_3:54463000-54463019 None:intergenic 45.0%
TTGTAGAGGTGGAATCGTCA+CGG + chr7_3:54463011-54463030 None:intergenic 45.0%
! TGGTAATGCTGCTACTACGA+TGG - chr7_3:54463167-54463186 Msa1109980:three_prime_UTR 45.0%
TTTGAGCTTGAGCTTCCTAC+TGG - chr7_3:54463237-54463256 Msa1109980:CDS 45.0%
GAAACGAAACAGATGGACGA+GGG + chr7_3:54464135-54464154 None:intergenic 45.0%
ACTTAAATGGAAGTGGTGCC+AGG + chr7_3:54464369-54464388 None:intergenic 45.0%
!! AGTGATTTCTGAAACGAGGC+AGG - chr7_3:54464462-54464481 Msa1109980:intron 45.0%
!! GTGATTTCTGAAACGAGGCA+GGG - chr7_3:54464463-54464482 Msa1109980:intron 45.0%
CGTGTGATATACTACCTCCT+AGG + chr7_3:54464555-54464574 None:intergenic 45.0%
! AGGGTGCTAGTTTCTTACGT+TGG - chr7_3:54464581-54464600 Msa1109980:intron 45.0%
GGTAAGTTGCTTACAATGGG+AGG - chr7_3:54464610-54464629 Msa1109980:intron 45.0%
AGGGAAAAGTAGATGACTGC+AGG - chr7_3:54464630-54464649 Msa1109980:intron 45.0%
!! CAATCAGATTTGGTGGAAGG+TGG + chr7_3:54464736-54464755 None:intergenic 45.0%
CACCTTCCACCAAATCTGAT+TGG - chr7_3:54464734-54464753 Msa1109980:intron 45.0%
GATCAAGTCCAACATGTGCT+TGG - chr7_3:54464855-54464874 Msa1109980:CDS 45.0%
! ATACCGCTATAGCGGTTTTC+GGG + chr7_3:54465002-54465021 None:intergenic 45.0%
TAGCTGCTATACCGCTATAG+CGG + chr7_3:54465010-54465029 None:intergenic 45.0%
TGCTACCCCAATTCAATCCT+AGG - chr7_3:54465111-54465130 Msa1109980:CDS 45.0%
GATATCTCCTTGTGCCAGAA+TGG - chr7_3:54465784-54465803 Msa1109980:intron 45.0%
! TTTGGAGTCAACAAGCAGAG+TGG + chr7_3:54466142-54466161 None:intergenic 45.0%
GACCTTGTTGCCATGTTTAC+AGG - chr7_3:54466456-54466475 Msa1109980:intron 45.0%
TGCCTGTAAACATGGCAACA+AGG + chr7_3:54466461-54466480 None:intergenic 45.0%
GTGCCAAAGCCAACACATAA+TGG - chr7_3:54466592-54466611 Msa1109980:CDS 45.0%
GCCAAAGCCAACACATAATG+GGG - chr7_3:54466594-54466613 Msa1109980:CDS 45.0%
!! TCCCCATTATGTGTTGGCTT+TGG + chr7_3:54466598-54466617 None:intergenic 45.0%
AATGTTTGACCAGTGGACAG+GGG - chr7_3:54466713-54466732 Msa1109980:CDS 45.0%
ATATGAATACCCCTGTCCAC+TGG + chr7_3:54466725-54466744 None:intergenic 45.0%
!! GTGGACAGGGGTATTCATAT+TGG - chr7_3:54466725-54466744 Msa1109980:CDS 45.0%
GACAAGTATGGGATGGAAAC+GGG - chr7_3:54466914-54466933 Msa1109980:CDS 45.0%
!! CTAAGGGGGTGTTAGTTTCA+AGG - chr7_3:54467012-54467031 Msa1109980:CDS 45.0%
! TCCCAGGAACTTTTATACCC+AGG + chr7_3:54467118-54467137 None:intergenic 45.0%
TGGGAAGTTACTTCATTCCC+AGG + chr7_3:54467134-54467153 None:intergenic 45.0%
!!! TCTTAGGGGGCGTTTGTTTT+GGG + chr7_3:54467374-54467393 None:intergenic 45.0%
!!! ATCTTAGGGGGCGTTTGTTT+TGG + chr7_3:54467375-54467394 None:intergenic 45.0%
GATATCAGGAAAAGGAGGAC+TGG - chr7_3:54467422-54467441 Msa1109980:intron 45.0%
AAAGGAGGACTGGGAATAAC+TGG - chr7_3:54467432-54467451 Msa1109980:intron 45.0%
! TAGCTGCTATTTAACGGCAC+AGG - chr7_3:54467590-54467609 Msa1109980:CDS 45.0%
! GGTTAATTTTGTGCAGCGGA+TGG - chr7_3:54467842-54467861 Msa1109980:CDS 45.0%
GGTTAATTACGTTCAGCGGA+TGG + chr7_3:54467902-54467921 None:intergenic 45.0%
! GGACTGCGAATTTTTGTTGC+TGG - chr7_3:54468243-54468262 Msa1109980:intron 45.0%
TGGAATGCTTCTAACTCCGA+TGG - chr7_3:54468291-54468310 Msa1109980:intron 45.0%
GGAATGCTTCTAACTCCGAT+GGG - chr7_3:54468292-54468311 Msa1109980:intron 45.0%
GCAAGCATAATGCAATCCCT+TGG + chr7_3:54468321-54468340 None:intergenic 45.0%
CAAGCTGTAAATACATCGGC+TGG + chr7_3:54468387-54468406 None:intergenic 45.0%
GAGTCTTTCGGTCATTTGGA+CGG + chr7_3:54469114-54469133 None:intergenic 45.0%
GCATGGAATGTTCTTCCTCA+TGG - chr7_3:54469181-54469200 Msa1109980:CDS 45.0%
GGAATGTTCTTCCTCATGGT+AGG - chr7_3:54469185-54469204 Msa1109980:CDS 45.0%
TGCTGAGCGAATTATGCGAT+CGG - chr7_3:54469399-54469418 Msa1109980:intron 45.0%
TGGTAGCATAGGGTGAGAAA+CGG + chr7_3:54469437-54469456 None:intergenic 45.0%
!! ATATGATGCTGATGGGTTGG+TGG + chr7_3:54469457-54469476 None:intergenic 45.0%
! CACATATGATGCTGATGGGT+TGG + chr7_3:54469460-54469479 None:intergenic 45.0%
CAACCCATCAGCATCATATG+TGG - chr7_3:54469458-54469477 Msa1109980:intron 45.0%
AAGTTGAGAAAGGCAGAGCT+CGG + chr7_3:54469585-54469604 None:intergenic 45.0%
! TTTGAAGTTTGGCTCGACCA+TGG - chr7_3:54469816-54469835 Msa1109980:intron 45.0%
AGAACTATAGGCAGCTGTTC+GGG + chr7_3:54469861-54469880 None:intergenic 45.0%
ACAGCTGCCTATAGTTCTTC+AGG - chr7_3:54469863-54469882 Msa1109980:intron 45.0%
AACCGACACAATGGTTCCAA+AGG + chr7_3:54469915-54469934 None:intergenic 45.0%
ATTCCGAAGTAGTAATGCGG+AGG - chr7_3:54470109-54470128 Msa1109980:intron 45.0%
TTCCGAAGTAGTAATGCGGA+GGG - chr7_3:54470110-54470129 Msa1109980:intron 45.0%
CAATTTGAGAGGCAGCAACT+TGG + chr7_3:54470191-54470210 None:intergenic 45.0%
GTACTAAGGCACGAAATCGA+TGG + chr7_3:54470584-54470603 None:intergenic 45.0%
TTTCGTGCCTTAGTACTCCT+AGG - chr7_3:54470588-54470607 Msa1109980:intron 45.0%
GATTTCTTGATATGGGCCCA+TGG - chr7_3:54470613-54470632 Msa1109980:CDS 45.0%
TTGTCCTGAACCAAATCCGA+CGG + chr7_3:54471092-54471111 None:intergenic 45.0%
!! TAGGACCCACATGATTTGGT+GGG + chr7_3:54471372-54471391 None:intergenic 45.0%
! ATAGGACCCACATGATTTGG+TGG + chr7_3:54471373-54471392 None:intergenic 45.0%
! ACCAATCAAGGAGAGTGTGT+TGG - chr7_3:54471423-54471442 Msa1109980:CDS 45.0%
TCCAACACACTCTCCTTGAT+TGG + chr7_3:54471427-54471446 None:intergenic 45.0%
ATGTCAGGTCGATCTAGTGA+AGG - chr7_3:54471651-54471670 Msa1109980:CDS 45.0%
!!! GTTTTGGCTGTGATTGTGGA+TGG - chr7_3:54471751-54471770 Msa1109980:intron 45.0%
! CAAGGTGCTTTAAGCAGACA+TGG + chr7_3:54471819-54471838 None:intergenic 45.0%
GACACAAGCAAAGCCATTGA+AGG + chr7_3:54471882-54471901 None:intergenic 45.0%
! TCAATGGCTTTGCTTGTGTC+TGG - chr7_3:54471882-54471901 Msa1109980:intron 45.0%
! CAATGGCTTTGCTTGTGTCT+GGG - chr7_3:54471883-54471902 Msa1109980:intron 45.0%
! AATGGCTTTGCTTGTGTCTG+GGG - chr7_3:54471884-54471903 Msa1109980:intron 45.0%
CTTGTGTCTGGGGAAATTGT+GGG - chr7_3:54471894-54471913 Msa1109980:intron 45.0%
ATTGTGGGAAGAGTTTCCAG+AGG - chr7_3:54471909-54471928 Msa1109980:intron 45.0%
TTGTGGGAAGAGTTTCCAGA+GGG - chr7_3:54471910-54471929 Msa1109980:intron 45.0%
!! GGGGAAAATAATCGGTTTGC+AGG - chr7_3:54471930-54471949 Msa1109980:intron 45.0%
!!! AGCATCTGCTGTTTTTGCAC+TGG - chr7_3:54472106-54472125 Msa1109980:intron 45.0%
!!! GCATCTGCTGTTTTTGCACT+GGG - chr7_3:54472107-54472126 Msa1109980:intron 45.0%
!! CTGTTGAGTGTTGCTTCAGA+TGG - chr7_3:54472230-54472249 Msa1109980:intron 45.0%
CAGAACCAACATATGGCTCA+TGG - chr7_3:54472889-54472908 Msa1109980:intron 45.0%
TACTCCCATGAGCCATATGT+TGG + chr7_3:54472897-54472916 None:intergenic 45.0%
CACCTCAAATTGGTCCTCTA+AGG - chr7_3:54472923-54472942 Msa1109980:intron 45.0%
ACCCTTAGAGGACCAATTTG+AGG + chr7_3:54472928-54472947 None:intergenic 45.0%
! CAAATTGGTCCTCTAAGGGT+TGG - chr7_3:54472928-54472947 Msa1109980:intron 45.0%
TGATGGTTTCAGCAATGGAG+TGG - chr7_3:54473080-54473099 Msa1109980:intron 45.0%
GCAAAACCATTGAAGCCTTC+TGG - chr7_3:54473249-54473268 Msa1109980:CDS 45.0%
CATTGAAGCCTTCTGGTGTT+CGG - chr7_3:54473256-54473275 Msa1109980:CDS 45.0%
! GTCACCAAACAGCATTGGAA+AGG + chr7_3:54473379-54473398 None:intergenic 45.0%
TAATTGCATGCTGCTCTGGT+AGG - chr7_3:54473462-54473481 Msa1109980:CDS 45.0%
CGCATTCCAGCTATGTAACT+TGG + chr7_3:54473534-54473553 None:intergenic 45.0%
!!! AGCTGACCCACTTTTAGGAT+CGG - chr7_3:54473611-54473630 Msa1109980:intron 45.0%
AAGTCCCCGATCCTAAAAGT+GGG + chr7_3:54473620-54473639 None:intergenic 45.0%
AAAGTCCCCGATCCTAAAAG+TGG + chr7_3:54473621-54473640 None:intergenic 45.0%
ATAGTGAAATGCCAGCACTC+TGG - chr7_3:54473780-54473799 Msa1109980:intron 45.0%
TGAAATACACACCAGAGTGC+TGG + chr7_3:54473794-54473813 None:intergenic 45.0%
TTCTCAGCTGGACAACTGTA+AGG + chr7_3:54473850-54473869 None:intergenic 45.0%
GCAACCACTATAGGAGAGAA+AGG + chr7_3:54473963-54473982 None:intergenic 45.0%
CTGACGAGAATGAACGTATC+AGG - chr7_3:54473985-54474004 Msa1109980:CDS 45.0%
!! TTGGTGTTTTGCACAGGGTA+TGG - chr7_3:54474399-54474418 Msa1109980:intron 45.0%
TAAGTAGTGTTGCCTCTTCG+TGG + chr7_3:54474427-54474446 None:intergenic 45.0%
AGGAATTTCTAAGCTCTGCC+TGG - chr7_3:54474478-54474497 Msa1109980:intron 45.0%
AGGGAATCTTATGCAGCTGA+TGG - chr7_3:54474606-54474625 Msa1109980:intron 45.0%
TGCAGCTGATGGAAACATTC+GGG - chr7_3:54474617-54474636 Msa1109980:intron 45.0%
! CTGATGGAAACATTCGGGTT+TGG - chr7_3:54474622-54474641 Msa1109980:intron 45.0%
! GGAAAGACTATTCTCTGAGG+GGG - chr7_3:54474643-54474662 Msa1109980:intron 45.0%
GTCCGAATGCAGTTGTTGAT+TGG - chr7_3:54474724-54474743 Msa1109980:intron 45.0%
TGCATTTACCAGTATGCGTC+GGG - chr7_3:54474907-54474926 Msa1109980:intron 45.0%
! ACACTGCACTCTGATGATGA+AGG + chr7_3:54474991-54475010 None:intergenic 45.0%
TCCCCCTCTCTCATTTACTA+CGG - chr7_3:54475242-54475261 Msa1109980:intron 45.0%
AGCCGTAGTAAATGAGAGAG+GGG + chr7_3:54475247-54475266 None:intergenic 45.0%
GAAGCCGTAGTAAATGAGAG+AGG + chr7_3:54475249-54475268 None:intergenic 45.0%
! TACTTTGCCCTTGCGGTTTT+TGG - chr7_3:54475375-54475394 Msa1109980:intron 45.0%
CACAAGATCCAAAAACCGCA+AGG + chr7_3:54475386-54475405 None:intergenic 45.0%
CGCCAAATCCCCAATCTTAA+AGG + chr7_3:54475452-54475471 None:intergenic 45.0%
AGATTGGGGATTTGGCGTTA+TGG - chr7_3:54475455-54475474 Msa1109980:intron 45.0%
! CTGAGCAACCCAAAGTTTTG+TGG + chr7_3:54475526-54475545 None:intergenic 45.0%
TAGGCTGCTTCTCAAGTTCA+CGG - chr7_3:54475655-54475674 Msa1109980:intron 45.0%
CACCTGAAATGTAAGCACCT+CGG - chr7_3:54475734-54475753 Msa1109980:intron 45.0%
! AACCGAGGTGCTTACATTTC+AGG + chr7_3:54475739-54475758 None:intergenic 45.0%
ACTTAGACTTGGAGATGTGC+AGG + chr7_3:54475885-54475904 None:intergenic 45.0%
!! GAGAAGCACTAACCAACTGA+AGG + chr7_3:54476245-54476264 None:intergenic 45.0%
TCAGTTGGTTAGTGCTTCTC+AGG - chr7_3:54476245-54476264 Msa1109980:intron 45.0%
TCTCACTATTGAAGCTCACC+GGG - chr7_3:54476314-54476333 Msa1109980:intron 45.0%
GCAGAACCACTGGCAATAAT+TGG + chr7_3:54476375-54476394 None:intergenic 45.0%
! GCTCACGGAACCAATTTTCT+GGG + chr7_3:54476472-54476491 None:intergenic 45.0%
! AGCTCACGGAACCAATTTTC+TGG + chr7_3:54476473-54476492 None:intergenic 45.0%
GTGGAAACTTAAGCAGCTCA+CGG + chr7_3:54476487-54476506 None:intergenic 45.0%
CAGATGTATTCACAGCAGAG+AGG + chr7_3:54476711-54476730 None:intergenic 45.0%
! TTCATTAGCCTCCATGTCTG+AGG - chr7_3:54476775-54476794 Msa1109980:CDS 45.0%
! TCATTAGCCTCCATGTCTGA+GGG - chr7_3:54476776-54476795 Msa1109980:CDS 45.0%
TCAATTGCAACCCTCAGACA+TGG + chr7_3:54476789-54476808 None:intergenic 45.0%
! GGAAGAAAGAAGCATAGTGG+AGG - chr7_3:54476811-54476830 Msa1109980:CDS 45.0%
!!! TTTTAATTTTTTTTCTTATT+TGG - chr7_3:54468222-54468241 Msa1109980:intron 5.0%
! GATGGTGGTTGTGACGGTTA+CGG + chr7_3:54462792-54462811 None:intergenic 50.0%
GATTACGGTTACGGTGGTGA+TGG + chr7_3:54462810-54462829 None:intergenic 50.0%
GATGGTGATTACGGTTACGG+TGG + chr7_3:54462816-54462835 None:intergenic 50.0%
GGAAAAAGCGGTTGTAGAGG+TGG + chr7_3:54463022-54463041 None:intergenic 50.0%
ATCGGAGCCGTCATCGTTTA+AGG + chr7_3:54463076-54463095 None:intergenic 50.0%
TGTTCCTAACCGGCGTGATT+CGG - chr7_3:54463107-54463126 Msa1109980:three_prime_UTR 50.0%
! AATTCCGAATCACGCCGGTT+AGG + chr7_3:54463114-54463133 None:intergenic 50.0%
! AACCGGCGTGATTCGGAATT+CGG - chr7_3:54463114-54463133 Msa1109980:three_prime_UTR 50.0%
GGTGCGAGTAGTAGTAGTGT+AGG - chr7_3:54463138-54463157 Msa1109980:three_prime_UTR 50.0%
TGAGCTTCCTACTGGTCCAT+CGG - chr7_3:54463245-54463264 Msa1109980:CDS 50.0%
! TGGTCCATCGGATAGTGGTT+TGG - chr7_3:54463257-54463276 Msa1109980:CDS 50.0%
GAGACCAAACCACTATCCGA+TGG + chr7_3:54463264-54463283 None:intergenic 50.0%
!! GTGGTTTGGTCTCGAAATGG+AGG - chr7_3:54463271-54463290 Msa1109980:CDS 50.0%
GAAATGGAGGCCGAAGGATA+GGG - chr7_3:54463284-54463303 Msa1109980:CDS 50.0%
! TTGACACGTGCATTGGTGCA+TGG - chr7_3:54463936-54463955 Msa1109980:intron 50.0%
GGAAACGAAACAGATGGACG+AGG + chr7_3:54464136-54464155 None:intergenic 50.0%
TGACCCGAAAACCGCTATAG+CGG - chr7_3:54464996-54465015 Msa1109980:intron 50.0%
TGCTACCCGTTCTCGATTGT+AGG - chr7_3:54465189-54465208 Msa1109980:intron 50.0%
!! GGTTACCTATTTTGGGGGCA+GGG - chr7_3:54465485-54465504 Msa1109980:intron 50.0%
!! GTTACCTATTTTGGGGGCAG+GGG - chr7_3:54465486-54465505 Msa1109980:intron 50.0%
ACCTATCCAGCACTCCATTC+TGG + chr7_3:54465801-54465820 None:intergenic 50.0%
GCACACCATGCCCATTGTAA+TGG + chr7_3:54466576-54466595 None:intergenic 50.0%
!!! CTTAGGGGGCGTTTGTTTTG+GGG + chr7_3:54467373-54467392 None:intergenic 50.0%
AATTGATGGGGTCTTCAGCC+AGG + chr7_3:54468085-54468104 None:intergenic 50.0%
!! GTTTTTGATTGCTCTGCGGC+TGG - chr7_3:54468108-54468127 Msa1109980:CDS 50.0%
TAACTCCGATGGGTCACCAA+GGG - chr7_3:54468302-54468321 Msa1109980:intron 50.0%
GCTGGGAATTCTACACTCTG+GGG + chr7_3:54468369-54468388 None:intergenic 50.0%
GGCTGGGAATTCTACACTCT+GGG + chr7_3:54468370-54468389 None:intergenic 50.0%
GAGAGTTGAGACCTACCATG+AGG + chr7_3:54469199-54469218 None:intergenic 50.0%
GGTAGCATAGGGTGAGAAAC+GGG + chr7_3:54469436-54469455 None:intergenic 50.0%
!! GATGGGTTGGTGGTAGCATA+GGG + chr7_3:54469447-54469466 None:intergenic 50.0%
!! TGATGGGTTGGTGGTAGCAT+AGG + chr7_3:54469448-54469467 None:intergenic 50.0%
TCCGAAGTAGTAATGCGGAG+GGG - chr7_3:54470111-54470130 Msa1109980:intron 50.0%
ACCCCTCCGCATTACTACTT+CGG + chr7_3:54470115-54470134 None:intergenic 50.0%
!! TAATGCGGAGGGGTACTTTC+TGG - chr7_3:54470121-54470140 Msa1109980:intron 50.0%
!! AATGCGGAGGGGTACTTTCT+GGG - chr7_3:54470122-54470141 Msa1109980:intron 50.0%
TTACCAGATCCACAGCCCAT+GGG + chr7_3:54470632-54470651 None:intergenic 50.0%
ATTACCAGATCCACAGCCCA+TGG + chr7_3:54470633-54470652 None:intergenic 50.0%
! TTTCCCGTCGGATTTGGTTC+AGG - chr7_3:54471085-54471104 Msa1109980:intron 50.0%
TGTCCTGAACCAAATCCGAC+GGG + chr7_3:54471091-54471110 None:intergenic 50.0%
! GTCGGATTTGGTTCAGGACA+AGG - chr7_3:54471091-54471110 Msa1109980:intron 50.0%
TGCTGCTAGCATTCCTCTTC+AGG + chr7_3:54471290-54471309 None:intergenic 50.0%
ATGGGTCCCACCAAATCATG+TGG - chr7_3:54471363-54471382 Msa1109980:intron 50.0%
TGGGTCCCACCAAATCATGT+GGG - chr7_3:54471364-54471383 Msa1109980:CDS 50.0%
ACATGACTGCAACCCAGCAA+TGG + chr7_3:54471635-54471654 None:intergenic 50.0%
CAGGTCGATCTAGTGAAGGA+CGG - chr7_3:54471655-54471674 Msa1109980:CDS 50.0%
! CTGAGCCCCTTTTCCTTCAA+TGG - chr7_3:54471866-54471885 Msa1109980:intron 50.0%
GCTTGTGTCTGGGGAAATTG+TGG - chr7_3:54471893-54471912 Msa1109980:intron 50.0%
TGTGGGAAGAGTTTCCAGAG+GGG - chr7_3:54471911-54471930 Msa1109980:intron 50.0%
TGGGTAGTAAACCTCTGGCT+GGG + chr7_3:54471995-54472014 None:intergenic 50.0%
TTGGGTAGTAAACCTCTGGC+TGG + chr7_3:54471996-54472015 None:intergenic 50.0%
ACTGGGTACCCTTGTTGATG+TGG - chr7_3:54472124-54472143 Msa1109980:intron 50.0%
CTGGGTACCCTTGTTGATGT+GGG - chr7_3:54472125-54472144 Msa1109980:intron 50.0%
TGCTTCAGATGGGAGTCCAT+TGG - chr7_3:54472241-54472260 Msa1109980:intron 50.0%
AGATGGGAGTCCATTGGTGA+GGG - chr7_3:54472247-54472266 Msa1109980:intron 50.0%
TTGTCACTCCCAACCCTTAG+AGG + chr7_3:54472940-54472959 None:intergenic 50.0%
AAAGATCCATCTCCGCGAGT+TGG - chr7_3:54473177-54473196 Msa1109980:CDS 50.0%
AAGATCCATCTCCGCGAGTT+GGG - chr7_3:54473178-54473197 Msa1109980:CDS 50.0%
CGTCGGGTTCTGTCCATAAT+AGG - chr7_3:54473210-54473229 Msa1109980:CDS 50.0%
CGAACACCAGAAGGCTTCAA+TGG + chr7_3:54473258-54473277 None:intergenic 50.0%
TCACTAGTCCGAACACCAGA+AGG + chr7_3:54473267-54473286 None:intergenic 50.0%
CGAGCAAGACTAGCAGAAAC+GGG + chr7_3:54473294-54473313 None:intergenic 50.0%
GCGAGCAAGACTAGCAGAAA+CGG + chr7_3:54473295-54473314 None:intergenic 50.0%
!! GGAGGAGTTCTGAAGGTTAG+AGG + chr7_3:54473495-54473514 None:intergenic 50.0%
! ACTGACTGGAGGAGTTCTGA+AGG + chr7_3:54473502-54473521 None:intergenic 50.0%
TCTGGAGAAGTCATCAGGTG+AGG + chr7_3:54473582-54473601 None:intergenic 50.0%
CAGTGTCTGGAGAAGTCATC+AGG + chr7_3:54473587-54473606 None:intergenic 50.0%
CTGATGACTTCTCCAGACAC+TGG - chr7_3:54473585-54473604 Msa1109980:intron 50.0%
!!! GGACTAGCTGACCCACTTTT+AGG - chr7_3:54473606-54473625 Msa1109980:intron 50.0%
!!! GCTGACCCACTTTTAGGATC+GGG - chr7_3:54473612-54473631 Msa1109980:intron 50.0%
!!! CTGACCCACTTTTAGGATCG+GGG - chr7_3:54473613-54473632 Msa1109980:intron 50.0%
TCGTCAGCAGCAACCACTAT+AGG + chr7_3:54473972-54473991 None:intergenic 50.0%
GTTGATTGGCAGCAGCAATG+CGG - chr7_3:54474738-54474757 Msa1109980:intron 50.0%
GCATTTACCAGTATGCGTCG+GGG - chr7_3:54474908-54474927 Msa1109980:intron 50.0%
CATTTACCAGTATGCGTCGG+GGG - chr7_3:54474909-54474928 Msa1109980:intron 50.0%
GTAAATGAGAGAGGGGGAGA+GGG + chr7_3:54475240-54475259 None:intergenic 50.0%
AGTAAATGAGAGAGGGGGAG+AGG + chr7_3:54475241-54475260 None:intergenic 50.0%
GCCGTAGTAAATGAGAGAGG+GGG + chr7_3:54475246-54475265 None:intergenic 50.0%
AGGCTGCTTCTCAAGTTCAC+GGG - chr7_3:54475656-54475675 Msa1109980:intron 50.0%
!! ATGGGAATTGGCTTTCAGCC+TGG - chr7_3:54476093-54476112 Msa1109980:intron 50.0%
!! TGGGAATTGGCTTTCAGCCT+GGG - chr7_3:54476094-54476113 Msa1109980:intron 50.0%
TTGGTTAGTGCTTCTCAGGC+CGG - chr7_3:54476249-54476268 Msa1109980:intron 50.0%
CTCACTATTGAAGCTCACCG+GGG - chr7_3:54476315-54476334 Msa1109980:intron 50.0%
CACGCTCCAATTATTGCCAG+TGG - chr7_3:54476366-54476385 Msa1109980:intron 50.0%
GAGTTGTTTGGCAGAACCAC+TGG + chr7_3:54476385-54476404 None:intergenic 50.0%
AGCCTTGAGGGTGATCAACT+GGG - chr7_3:54476417-54476436 Msa1109980:intron 50.0%
ATTGCAACCCTCAGACATGG+AGG + chr7_3:54476786-54476805 None:intergenic 50.0%
GTCTGAGGGTTGCAATTGAC+TGG - chr7_3:54476790-54476809 Msa1109980:CDS 50.0%
AGTGGAGGCTCCGACAAATA+AGG - chr7_3:54476826-54476845 Msa1109980:CDS 50.0%
!! GGTGGTGATGGTGGTTGTGA+CGG + chr7_3:54462798-54462817 None:intergenic 55.0%
!! TACGGTTACGGTGGTGATGG+TGG + chr7_3:54462807-54462826 None:intergenic 55.0%
GGCGGAAAAAGCGGTTGTAG+AGG + chr7_3:54463025-54463044 None:intergenic 55.0%
TGATGCAGGGGCGGAAAAAG+CGG + chr7_3:54463034-54463053 None:intergenic 55.0%
TGAGGCTGAAGCTGATGCAG+GGG + chr7_3:54463046-54463065 None:intergenic 55.0%
CTGAGGCTGAAGCTGATGCA+GGG + chr7_3:54463047-54463066 None:intergenic 55.0%
GGAGCCGTCATCGTTTAAGG+CGG + chr7_3:54463073-54463092 None:intergenic 55.0%
CACCGAATTCCGAATCACGC+CGG + chr7_3:54463119-54463138 None:intergenic 55.0%
CCACTATCCGATGGACCAGT+AGG + chr7_3:54463255-54463274 None:intergenic 55.0%
CCTACTGGTCCATCGGATAG+TGG - chr7_3:54463252-54463271 Msa1109980:CDS 55.0%
CGAAATGGAGGCCGAAGGAT+AGG - chr7_3:54463283-54463302 Msa1109980:CDS 55.0%
CTCAGTAAGCAGCTTCCCCT+AGG - chr7_3:54464535-54464554 Msa1109980:intron 55.0%
AGTAAGCAGCTTCCCCTAGG+AGG - chr7_3:54464538-54464557 Msa1109980:intron 55.0%
CACTCGGACCAAGCACATGT+TGG + chr7_3:54464866-54464885 None:intergenic 55.0%
CAACATGTGCTTGGTCCGAG+TGG - chr7_3:54464864-54464883 Msa1109980:CDS 55.0%
!! CGGTTACCTATTTTGGGGGC+AGG - chr7_3:54465484-54465503 Msa1109980:intron 55.0%
CAGCACTCCATTCTGGCACA+AGG + chr7_3:54465794-54465813 None:intergenic 55.0%
CTTGTGCCAGAATGGAGTGC+TGG - chr7_3:54465792-54465811 Msa1109980:intron 55.0%
!! GCCAGAATGGAGTGCTGGAT+AGG - chr7_3:54465797-54465816 Msa1109980:CDS 55.0%
TGGTCAACGCCGTGCAAATG+TGG + chr7_3:54467923-54467942 None:intergenic 55.0%
CTAACTCCGATGGGTCACCA+AGG - chr7_3:54468301-54468320 Msa1109980:intron 55.0%
! GCAATCCCTTGGTGACCCAT+CGG + chr7_3:54468310-54468329 None:intergenic 55.0%
CGGCTGGGAATTCTACACTC+TGG + chr7_3:54468371-54468390 None:intergenic 55.0%
TTCGGTCATTTGGACGGCCA+GGG + chr7_3:54469108-54469127 None:intergenic 55.0%
TTTCGGTCATTTGGACGGCC+AGG + chr7_3:54469109-54469128 None:intergenic 55.0%
ACTATAGGCAGCTGTTCGGG+TGG + chr7_3:54469858-54469877 None:intergenic 55.0%
TGCTGGGTTGCAGTCATGTC+AGG - chr7_3:54471636-54471655 Msa1109980:intron 55.0%
GTCGATCTAGTGAAGGACGG+AGG - chr7_3:54471658-54471677 Msa1109980:CDS 55.0%
! CATTGCACGTTGCTCTGGGT+AGG + chr7_3:54471722-54471741 None:intergenic 55.0%
CTACCCAGAGCAACGTGCAA+TGG - chr7_3:54471720-54471739 Msa1109980:intron 55.0%
CAGCCATTGCACGTTGCTCT+GGG + chr7_3:54471726-54471745 None:intergenic 55.0%
GGGTAGTAAACCTCTGGCTG+GGG + chr7_3:54471994-54472013 None:intergenic 55.0%
CAGATGGGAGTCCATTGGTG+AGG - chr7_3:54472246-54472265 Msa1109980:intron 55.0%
! GCGCTAGCACGCTTTGCTTT+TGG - chr7_3:54472748-54472767 Msa1109980:intron 55.0%
AGCAGTCCTCTCGCTAGTTC+TGG - chr7_3:54472994-54473013 Msa1109980:intron 55.0%
GAGTTGGGAACCTTGGTCGT+CGG - chr7_3:54473193-54473212 Msa1109980:CDS 55.0%
AGTTGGGAACCTTGGTCGTC+GGG - chr7_3:54473194-54473213 Msa1109980:CDS 55.0%
GTCTTGCTCGCTCGTCTTCT+TGG - chr7_3:54473304-54473323 Msa1109980:CDS 55.0%
GCTATGTAACTTGGGCGAGG+AGG + chr7_3:54473525-54473544 None:intergenic 55.0%
CCAGCTATGTAACTTGGGCG+AGG + chr7_3:54473528-54473547 None:intergenic 55.0%
CCTCGCCCAAGTTACATAGC+TGG - chr7_3:54473525-54473544 Msa1109980:intron 55.0%
CAGGGTATGGAACCACGAAG+AGG - chr7_3:54474412-54474431 Msa1109980:intron 55.0%
AGAGTGCAGTGTCTCTGCGT+TGG - chr7_3:54474999-54475018 Msa1109980:intron 55.0%
GGCTGCTTCTCAAGTTCACG+GGG - chr7_3:54475657-54475676 Msa1109980:intron 55.0%
GCTGCTTCTCAAGTTCACGG+GGG - chr7_3:54475658-54475677 Msa1109980:intron 55.0%
! TTTCAGCCTGGGTTAGACCC+TGG - chr7_3:54476105-54476124 Msa1109980:intron 55.0%
ACCTTTCCAGGGTCTAACCC+AGG + chr7_3:54476114-54476133 None:intergenic 55.0%
TGGTTAGTGCTTCTCAGGCC+GGG - chr7_3:54476250-54476269 Msa1109980:intron 55.0%
CAGCCTTGAGGGTGATCAAC+TGG - chr7_3:54476416-54476435 Msa1109980:intron 55.0%
TGCCCAGTTGATCACCCTCA+AGG + chr7_3:54476422-54476441 None:intergenic 55.0%
GGTTGTGACGGTTACGGTGG+CGG + chr7_3:54462786-54462805 None:intergenic 60.0%
GGTGGTTGTGACGGTTACGG+TGG + chr7_3:54462789-54462808 None:intergenic 60.0%
GCTGAGGCTGAAGCTGATGC+AGG + chr7_3:54463048-54463067 None:intergenic 60.0%
! ATCGTTTAAGGCGGCGGCTG+AGG + chr7_3:54463064-54463083 None:intergenic 60.0%
GCCGCCGCCTTAAACGATGA+CGG - chr7_3:54463066-54463085 Msa1109980:three_prime_UTR 60.0%
! GCCGTCATCGTTTAAGGCGG+CGG + chr7_3:54463070-54463089 None:intergenic 60.0%
! CGGCGTGATTCGGAATTCGG+TGG - chr7_3:54463117-54463136 Msa1109980:three_prime_UTR 60.0%
GGTCTCGAAATGGAGGCCGA+AGG - chr7_3:54463278-54463297 Msa1109980:CDS 60.0%
AGCTCCCCTGCCCCCAAAAT+AGG + chr7_3:54465493-54465512 None:intergenic 60.0%
ATCCATGCTGCAGGGATGCG+TGG - chr7_3:54469549-54469568 Msa1109980:intron 60.0%
TCCATGCTGCAGGGATGCGT+GGG - chr7_3:54469550-54469569 Msa1109980:intron 60.0%
CTGCAGGGATGCGTGGGATA+TGG - chr7_3:54469556-54469575 Msa1109980:intron 60.0%
! TGATATGGGCCCATGGGCTG+TGG - chr7_3:54470620-54470639 Msa1109980:CDS 60.0%
GCAGCCATTGCACGTTGCTC+TGG + chr7_3:54471727-54471746 None:intergenic 60.0%
GGCTGGGGTTCAGACAGTAG+AGG + chr7_3:54471979-54471998 None:intergenic 60.0%
ACTGTCTGAACCCCAGCCAG+AGG - chr7_3:54471981-54472000 Msa1109980:intron 60.0%
TGGGAGTCCATTGGTGAGGG+CGG - chr7_3:54472250-54472269 Msa1109980:intron 60.0%
AGGTTCCCAACTCGCGGAGA+TGG + chr7_3:54473186-54473205 None:intergenic 60.0%
! TCTCCGCGAGTTGGGAACCT+TGG - chr7_3:54473186-54473205 Msa1109980:CDS 60.0%
CGACCAAGGTTCCCAACTCG+CGG + chr7_3:54473192-54473211 None:intergenic 60.0%
TGGACAGAACCCGACGACCA+AGG + chr7_3:54473206-54473225 None:intergenic 60.0%
GGGTCAGCTAGTCCAGTGTC+TGG + chr7_3:54473600-54473619 None:intergenic 60.0%
GCATTCGGACTCCTCACACC+AGG + chr7_3:54474714-54474733 None:intergenic 60.0%
GCAGCAGCAATGCGGCTATC+TGG - chr7_3:54474746-54474765 Msa1109980:intron 60.0%
AATGAGAGAGGGGGAGAGGG+AGG + chr7_3:54475237-54475256 None:intergenic 60.0%
! GCCTGGGTTAGACCCTGGAA+AGG - chr7_3:54476110-54476129 Msa1109980:intron 60.0%
GGTTAGTGCTTCTCAGGCCG+GGG - chr7_3:54476251-54476270 Msa1109980:intron 60.0%
CTAAAGCCGTGAGTGAGCCC+CGG + chr7_3:54476335-54476354 None:intergenic 60.0%
GGCTGAAGCTGATGCAGGGG+CGG + chr7_3:54463043-54463062 None:intergenic 65.0%
TCCCACGCATCCCTGCAGCA+TGG + chr7_3:54469554-54469573 None:intergenic 65.0%
GAGTCCATTGGTGAGGGCGG+AGG - chr7_3:54472253-54472272 Msa1109980:intron 65.0%
GCTACCTCCGCCCTCACCAA+TGG + chr7_3:54472260-54472279 None:intergenic 65.0%
GTGAGGGCGGAGGTAGCAGT+TGG - chr7_3:54472263-54472282 Msa1109980:intron 65.0%
GGGCGGAGGTAGCAGTTGGT+AGG - chr7_3:54472267-54472286 Msa1109980:intron 65.0%
CTTGGGCGAGGAGGACTGAC+TGG + chr7_3:54473516-54473535 None:intergenic 65.0%
ACGTCTCCCCCGACGCATAC+TGG + chr7_3:54474918-54474937 None:intergenic 65.0%
CACGGGGGACAGTTTGCAGC+TGG - chr7_3:54475673-54475692 Msa1109980:intron 65.0%
AGCTCACCGGGGCTCACTCA+CGG - chr7_3:54476326-54476345 Msa1109980:intron 65.0%
! GGGCCCATGGGCTGTGGATC+TGG - chr7_3:54470626-54470645 Msa1109980:CDS 70.0%
GGGCGAGGAGGACTGACTGG+AGG + chr7_3:54473513-54473532 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 54462706 54477097 54462706 ID=Msa1109980;Name=Msa1109980
chr7_3 mRNA 54462706 54477097 54462706 ID=Msa1109980-mRNA-1;Parent=Msa1109980;Name=Msa1109980-mRNA-1;_AED=0.09;_eAED=0.09;_QI=234|0.86|0.91|0.95|1|1|24|510|1370
chr7_3 exon 54462706 54463554 54462706 ID=Msa1109980-mRNA-1:exon:11461;Parent=Msa1109980-mRNA-1
chr7_3 exon 54463672 54463756 54463672 ID=Msa1109980-mRNA-1:exon:11460;Parent=Msa1109980-mRNA-1
chr7_3 exon 54464060 54464145 54464060 ID=Msa1109980-mRNA-1:exon:11459;Parent=Msa1109980-mRNA-1
chr7_3 exon 54464783 54464884 54464783 ID=Msa1109980-mRNA-1:exon:11458;Parent=Msa1109980-mRNA-1
chr7_3 exon 54465036 54465181 54465036 ID=Msa1109980-mRNA-1:exon:11457;Parent=Msa1109980-mRNA-1
chr7_3 exon 54465264 54465388 54465264 ID=Msa1109980-mRNA-1:exon:11456;Parent=Msa1109980-mRNA-1
chr7_3 exon 54465797 54465911 54465797 ID=Msa1109980-mRNA-1:exon:11455;Parent=Msa1109980-mRNA-1
chr7_3 exon 54466002 54466319 54466002 ID=Msa1109980-mRNA-1:exon:11454;Parent=Msa1109980-mRNA-1
chr7_3 exon 54466461 54467054 54466461 ID=Msa1109980-mRNA-1:exon:11453;Parent=Msa1109980-mRNA-1
chr7_3 exon 54467519 54467702 54467519 ID=Msa1109980-mRNA-1:exon:11452;Parent=Msa1109980-mRNA-1
chr7_3 exon 54467801 54468154 54467801 ID=Msa1109980-mRNA-1:exon:11451;Parent=Msa1109980-mRNA-1
chr7_3 exon 54468691 54468747 54468691 ID=Msa1109980-mRNA-1:exon:11450;Parent=Msa1109980-mRNA-1
chr7_3 exon 54468943 54469053 54468943 ID=Msa1109980-mRNA-1:exon:11449;Parent=Msa1109980-mRNA-1
chr7_3 exon 54469156 54469239 54469156 ID=Msa1109980-mRNA-1:exon:11448;Parent=Msa1109980-mRNA-1
chr7_3 exon 54469919 54470020 54469919 ID=Msa1109980-mRNA-1:exon:11447;Parent=Msa1109980-mRNA-1
chr7_3 exon 54470163 54470241 54470163 ID=Msa1109980-mRNA-1:exon:11446;Parent=Msa1109980-mRNA-1
chr7_3 exon 54470324 54470468 54470324 ID=Msa1109980-mRNA-1:exon:11445;Parent=Msa1109980-mRNA-1
chr7_3 exon 54470601 54470755 54470601 ID=Msa1109980-mRNA-1:exon:11444;Parent=Msa1109980-mRNA-1
chr7_3 exon 54471364 54471521 54471364 ID=Msa1109980-mRNA-1:exon:11443;Parent=Msa1109980-mRNA-1
chr7_3 exon 54471648 54471710 54471648 ID=Msa1109980-mRNA-1:exon:11442;Parent=Msa1109980-mRNA-1
chr7_3 exon 54473167 54473325 54473167 ID=Msa1109980-mRNA-1:exon:11441;Parent=Msa1109980-mRNA-1
chr7_3 exon 54473409 54473491 54473409 ID=Msa1109980-mRNA-1:exon:11440;Parent=Msa1109980-mRNA-1
chr7_3 exon 54473985 54474087 54473985 ID=Msa1109980-mRNA-1:exon:11439;Parent=Msa1109980-mRNA-1
chr7_3 exon 54476498 54477097 54476498 ID=Msa1109980-mRNA-1:exon:11438;Parent=Msa1109980-mRNA-1
chr7_3 five_prime_UTR 54476864 54477097 54476864 ID=Msa1109980-mRNA-1:five_prime_utr;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54476498 54476863 54476498 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54473985 54474087 54473985 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54473409 54473491 54473409 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54473167 54473325 54473167 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54471648 54471710 54471648 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54471364 54471521 54471364 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54470601 54470755 54470601 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54470324 54470468 54470324 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54470163 54470241 54470163 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54469919 54470020 54469919 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54469156 54469239 54469156 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54468943 54469053 54468943 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54468691 54468747 54468691 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54467801 54468154 54467801 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54467519 54467702 54467519 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54466461 54467054 54466461 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54466002 54466319 54466002 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54465797 54465911 54465797 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54465264 54465388 54465264 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54465036 54465181 54465036 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54464783 54464884 54464783 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54464060 54464145 54464060 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54463672 54463756 54463672 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 CDS 54463216 54463554 54463216 ID=Msa1109980-mRNA-1:cds;Parent=Msa1109980-mRNA-1
chr7_3 three_prime_UTR 54462706 54463215 54462706 ID=Msa1109980-mRNA-1:three_prime_utr;Parent=Msa1109980-mRNA-1
Gene Sequence

>Msa1109980

ATGGCATTGGGAGATTTAATGGCATCGCGATTTTCCCAATCAACTGTTCTTATAGTTCCTAATCATCACCGTGACGATTCCACCTCTACAACCGCTTTTTCCGCCCCTGCATCAGCTTCAGCCTCAGCCGCCGCCTTAAACGATGACGGCTCCGATTTCAATAGTTCTGTTCCTAACCGGCGTGATTCGGAATTCGGTGGTGCGAGTAGTAGTAGTGTAGGTGTTTATGGTAATGCTGCTACTACGATGGTGTATTTGCCGCAGACGAGTTTCTTCAATGAGCTACGTCATGATGCTTTTGAGCTTGAGCTTCCTACTGGTCCATCGGATAGTGGTTTGGTCTCGAAATGGAGGCCGAAGGATAGGATGAAGACAGGATGTGTAGCTCTAGTATTATGTTTAAATATTAATGTCGATCCACCAGATGTAATAAAGATATCTCCTTGTGCCAGAATGGAGTGCTGGATAGATCCTTTTTCTATGGCACCACAGAAGGCATTAGAGTTGATTGGGAAATCTTTGACCAGTCAGTATGAAAGATGGCAACCAAAGGCACGCTATAAGTGTCAACTTGATCCAACATTGGATGAGGTGAAAAAGCTTTGTACTACATGTCGTAGATATGCAAAGTCGGAAAGAGTTTTGTTCCATTACAATGGGCATGGTGTGCCAAAGCCAACACATAATGGGGAACTTTGGGTCTTCAATAAGACCCCATCAATTTATGTTTTTGATTGCTCTGCGGCTGGTAAAGTTGTGAATGCCTTCATTCAGCTTCATGAATGGAATGCTTCTAACTCCGATGGGTCACCAAGGGATTGCATTATGCTTGCAGCATGTGAAGCGCACGAGACTTTGCCCCAGAGTGTAGAATTCCCAGCCGATGTATTTACAGCTTGTCTTACCACACCTATAAAGATGGCATTGCGATGGTTTTCTACTCGTTCGTTACTTCGCGACTCGTTTGATTATTTACTTATAGACAAGATCCCTGGCCGTCCAAATGACCGAAAGACTCTTCTTGGTGAATTGAATTGGATCTTTACAGCAGTAACTGATACGATTGCATGGAATGTTCTTCCTCATGATCTTTTTCAGAGACTGTTCAGACAGGATTTGCTTGTTGCAAGTTTGTTTCGAAATTTTCTACTTGCTGAGCGAATTATGCGATCGGCAAATTGTACTCCCGTTTCTCACCCTATGCTACCACCAACCCATCAGCATCATATGTGGGATGCGTGGGATATGGCTGCCGAGCTCTGCCTTTCTCAACTTCCTTCATTAGTTGAGGATCCTAATGCAGAATTTCAGCCTAGTACATTTTTTACCGAGCAGTTAACAGCATTTGAAGTTTGGCTCGACCATGGTTCTGAGCATAAGAAACCACCCGAACAGCTGCCTATAGTTCTTCAGGTTTTACTTAGTCAATGCCATCGATTTCGTGCCTTAGTACTCCTAGGAAGATTTCTTGATATGGGCCCATGGGCTGTGGATCTGGCATTATCTGTTGGAATCTTCCCTTATGTTCTGAAGCTGTTGCAAACAACCACACCAGAACTAAGACAGATTCTTGTATTCATATGGACAAAGATCCTTGCACTTGACAAGTCATTATTAAAGTACATGAACATGTTATTTTTCCCGTCGGATTTGGTTCAGGACAAGTCATGTCAGGTCGATCTAGTGAAGGACGGAGGTCATATCTATTTTATGAAGTTTCTTGATAGCTCGGAAGCCTACCCAGAGCAACGTGCAATGGCTGCTTTTGTTTTGGCTGTGATTGTGGATGGTCATAGAAGAGGCCAAGAAGCTTGTATTGAAGCTGGTTTGAGCCATGTCTGCTTAAAGCACCTTGAGAGTTCATCTCCTAATGATTCACAAACTGAGCCCCTTTTCCTTCAATGGCTTTGCTTGTGTCTGGGGAAATTGTGGGAAGAGTTTCCAGAGGGGAAAATAATCGGTTTGCAGGGACATGCAACTTCTATACTTGCTCCTCTACTGTCTGAACCCCAGCCAGAGGTTAGAGCATCTGCTGTTTTTGCACTGGGTACCCTTGTTGATGTGGGATTTGATTCGTGTAGAAGTGTTGGAGATGAAGAATGTGATGATGATGACAAGTTTAGGGCTGAAGTTAGTATAGTTAGGAGTCTGTTGAGTGTTGCTTCAGATGGGAGTCCATTGGTGAGGGCGGAGGTAGCAGTTGCGCTAGCACGCTTTGCTTTTGGCCACAACAAGCACCTGAAATCTATTGCTGCTGCATATTGGAAACCTCAGACTAATTCTTTGATAAATTCCTTACCATCATTGACTAATATTAAAGATACGGGTGGTGGATATTCTAAACAGAACCAACATATGGCTCATGGGAGTATTGTTTCACCTCAAATTGGTCCTCTAAGGGTTGGGAGTGACAATTCTAAAGTAATTCGTGATGGGCGGGTCTCTTCAAGCAGTCCTCTCGCTAGTTCTGGAATAATGCACGGGTCCCCATTGTCTGACAATTCCTCTCATCATTCTGATTCAGGAATACTGAATGATGGTTTCAGCAATGGAGTGGTTAACAGCTTTGGGCCAAAGCCTTTAGACAATGCATTGTATTCACAATGTGTACTTGCTATGTGTACTTTGGCAAAAGATCCATCTCCGCGAGTTGGGAACCTTGGTCGTCGGGTTCTGTCCATAATAGGTATTGAACAAGTGGTAGCAAAACCATTGAAGCCTTCTGGTGTTCGGACTAGTGAATCTCCCGTTTCTGCTAGTCTTGCTCGCTCGTCTTCTTGGTTTGATATGAATGGTGGACACTTGCCTCTAACCTTCAGAACTCCTCCAGTCAGTCCTCCTCGCCCAAGTTACATAGCTGGAATGCGGAGAGTATGTTCATTGGAGTTTAGGCCTCACCTGATGACTTCTCCAGACACTGGACTAGCTGACCCACTTTTAGGATCGGGGACTTTCGATCGCAGTTTACTTCCTCAATCAAGTATATATAATTGGAGTTGTGGGCACTTCTCCAAATCACTTTTAACTGCTGCAGATGATAGCGAAGAAGTTTTAGCTAGAAGAGAGGAGAGGGAAAAATTTGCATTGGAGAACATAGTGAAATGCCAGCACTCTGCTGTTAGTAGGTTAACAAATCCAATTGCTAAATGGGACATAAAGGGCACACAAACATTGTTGCTACAACCTTTCTCTCCTATAGTGGTTGCTGCTGACGAGAATGAACGTATCAGGGTATGGAACCACGAAGAGGCAACACTACTTAATAGTTTTGATAATCATGATTTTCCTGACAAAGGAATTTCTAAGCTCTGCCTGGTGAATGAGCTTGATGATAGCTTGCTTCTTGCTGCTTCATCTGATGGAAACATTCGGGTTTGGAAAGACTATTCTCTGAGGGGGAAACAGAAGCTTGTCACTGCATTCTCTTCAATTCATGGGCATAAACCTGGTGTGAGGAGTCCGAATGCAGTTGTTGATTGGCAGCAGCAATGCGGCTATCTGTATGCGTCGGGGGAGACGTCATCAATAATGCTGTGGGATCTTGATAAAGAGCAGCTTGTTAATACTATACCTTCATCATCAGAGTGCAGTGTCTCTGCGTTGGCTGCTTCTCAAGTTCACGGGGGACAGTTTGCAGCTGGTTTTGTAGATGGTTCTGTAAGACTCTATGATGCCAGAACACCTGAAATGCTTGTATGTGGATTACGGCCACACACACAGAGAGTAGAAAAAGTTATGGGAATTGGCTTTCAGCCTGGGTTAGACCCTGGAAAGTTGGTTAGTGCTTCTCAGGCCGGGGATATCCAATTCCTTGATATAAGAAATCATAGCAGCGCCTATCTCACTATTGAAGCTCACCGGGGCTCACTCACGGCTTTAGCAGTACATAGACACGCTCCAATTATTGCCAGTGGTTCTGCCAAACAACTCATTAAGGTTTTCAGCCTTGAGGGTGATCAACTGGGCACCATTCGTTACTATCCTACTCTAATGGCCCAGAAAATTGGTTCCGTGAGCTGCTTAAGTTTCCACCCATATCAATTACTACTTGCTGCTGGTGCTGCAGATGCATGTGTGTGCATCTATGCCGATGACAATACTCAAGCAAAATGA
Protein sequence

>Msa1109980

MALGDLMASRFSQSTVLIVPNHHRDDSTSTTAFSAPASASASAAALNDDGSDFNSSVPNRRDSEFGGASSSSVGVYGNAATTMVYLPQTSFFNELRHDAFELELPTGPSDSGLVSKWRPKDRMKTGCVALVLCLNINVDPPDVIKISPCARMECWIDPFSMAPQKALELIGKSLTSQYERWQPKARYKCQLDPTLDEVKKLCTTCRRYAKSERVLFHYNGHGVPKPTHNGELWVFNKTPSIYVFDCSAAGKVVNAFIQLHEWNASNSDGSPRDCIMLAACEAHETLPQSVEFPADVFTACLTTPIKMALRWFSTRSLLRDSFDYLLIDKIPGRPNDRKTLLGELNWIFTAVTDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCTPVSHPMLPPTHQHHMWDAWDMAAELCLSQLPSLVEDPNAEFQPSTFFTEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTTTPELRQILVFIWTKILALDKSLLKYMNMLFFPSDLVQDKSCQVDLVKDGGHIYFMKFLDSSEAYPEQRAMAAFVLAVIVDGHRRGQEACIEAGLSHVCLKHLESSSPNDSQTEPLFLQWLCLCLGKLWEEFPEGKIIGLQGHATSILAPLLSEPQPEVRASAVFALGTLVDVGFDSCRSVGDEECDDDDKFRAEVSIVRSLLSVASDGSPLVRAEVAVALARFAFGHNKHLKSIAAAYWKPQTNSLINSLPSLTNIKDTGGGYSKQNQHMAHGSIVSPQIGPLRVGSDNSKVIRDGRVSSSSPLASSGIMHGSPLSDNSSHHSDSGILNDGFSNGVVNSFGPKPLDNALYSQCVLAMCTLAKDPSPRVGNLGRRVLSIIGIEQVVAKPLKPSGVRTSESPVSASLARSSSWFDMNGGHLPLTFRTPPVSPPRPSYIAGMRRVCSLEFRPHLMTSPDTGLADPLLGSGTFDRSLLPQSSIYNWSCGHFSKSLLTAADDSEEVLARREEREKFALENIVKCQHSAVSRLTNPIAKWDIKGTQTLLLQPFSPIVVAADENERIRVWNHEEATLLNSFDNHDFPDKGISKLCLVNELDDSLLLAASSDGNIRVWKDYSLRGKQKLVTAFSSIHGHKPGVRSPNAVVDWQQQCGYLYASGETSSIMLWDLDKEQLVNTIPSSSECSVSALAASQVHGGQFAAGFVDGSVRLYDARTPEMLVCGLRPHTQRVEKVMGIGFQPGLDPGKLVSASQAGDIQFLDIRNHSSAYLTIEAHRGSLTALAVHRHAPIIASGSAKQLIKVFSLEGDQLGTIRYYPTLMAQKIGSVSCLSFHPYQLLLAAGAADACVCIYADDNTQAK*