AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1111410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111410 MtrunA17_Chr7g0246311 96.190 525 9 1 1 525 1 514 0.0 1008
Msa1111410 MtrunA17_Chr8g0351231 81.298 524 84 3 1 523 1 511 0.0 791
Msa1111410 MtrunA17_Chr4g0064531 37.037 405 243 8 15 413 15 413 3.56e-85 274
Msa1111410 MtrunA17_Chr4g0064531 41.346 104 58 2 262 362 440 543 4.37e-15 78.2
Msa1111410 MtrunA17_Chr3g0137471 33.409 443 232 12 17 417 17 438 5.94e-68 229
Msa1111410 MtrunA17_Chr3g0137471 37.000 100 60 2 262 358 465 564 4.61e-12 68.6
Msa1111410 MtrunA17_Chr1g0199571 34.074 405 246 12 4 397 3 397 5.04e-63 215
Msa1111410 MtrunA17_Chr1g0156811 32.945 343 219 6 58 395 59 395 4.12e-54 191
Msa1111410 MtrunA17_Chr4g0037111 34.437 302 185 7 38 333 38 332 3.10e-53 183
Msa1111410 MtrunA17_Chr2g0313621 25.676 296 196 11 68 343 74 365 8.65e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111410 AT3G61050.2 75.143 523 116 2 1 523 1 509 0.0 745
Msa1111410 AT3G61050.1 75.143 523 116 2 1 523 1 509 0.0 745
Msa1111410 AT3G61030.1 60.807 347 70 8 18 364 1 281 2.50e-127 381
Msa1111410 AT3G60950.1 59.654 347 81 6 18 364 1 288 2.41e-124 378
Msa1111410 AT1G05500.1 40.863 394 221 8 1 388 1 388 1.05e-97 307
Msa1111410 AT1G05500.1 37.113 97 60 1 262 357 434 530 2.03e-12 70.1
Msa1111410 AT5G04220.2 35.813 363 209 9 61 416 62 407 1.71e-66 224
Msa1111410 AT5G04220.3 35.933 359 206 9 65 416 4 345 1.79e-65 220
Msa1111410 AT1G05500.2 42.000 250 134 7 144 388 1 244 8.16e-57 195
Msa1111410 AT1G05500.2 37.113 97 60 1 262 357 290 386 2.55e-12 69.3
Msa1111410 AT1G20080.2 30.250 400 259 9 1 395 11 395 5.23e-56 196
Msa1111410 AT1G20080.3 30.250 400 259 9 1 395 11 395 5.23e-56 196
Msa1111410 AT1G20080.4 30.250 400 259 9 1 395 11 395 5.23e-56 196
Msa1111410 AT1G20080.1 30.250 400 259 9 1 395 11 395 5.23e-56 196
Msa1111410 AT1G20080.5 30.250 400 259 9 1 395 11 395 5.23e-56 196
Msa1111410 AT2G20990.1 30.484 351 231 7 58 401 59 403 6.04e-52 185
Msa1111410 AT2G20990.2 28.533 375 231 7 58 401 59 427 2.58e-48 176
Msa1111410 AT2G20990.3 28.278 389 228 9 58 401 59 441 3.56e-45 167
Msa1111410 AT5G04220.1 32.828 198 113 6 224 416 3 185 1.27e-21 96.3
Msa1111410 AT3G14590.2 25.926 297 196 11 68 343 70 363 3.04e-14 76.3
Msa1111410 AT3G14590.3 25.926 297 196 11 68 343 39 332 3.22e-14 75.9
Msa1111410 AT3G14590.1 25.926 297 196 11 68 343 25 318 4.03e-14 75.9
Msa1111410 AT1G53590.1 26.351 296 195 10 68 343 70 362 5.77e-14 75.1

Find 155 sgRNAs with CRISPR-Local

Find 497 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTATTCAAAATTGAATT+TGG 0.157199 7_3:+57118698 Msa1111410:five_prime_UTR
TCTTAAACACGTTTCTAAAT+TGG 0.176233 7_3:+57118642 Msa1111410:five_prime_UTR
TCTTTAAGTCGTCTCTATTC+AGG 0.198526 7_3:-57120085 None:intergenic
GGGAAAATGGGTTTGTTCTT+TGG 0.208832 7_3:+57118741 Msa1111410:exon
CGGTGATCCTAATATTGTTT+TGG 0.212046 7_3:+57122876 Msa1111410:CDS
GTGATTGGAATTTGGGAAAA+TGG 0.216216 7_3:+57118728 Msa1111410:exon
CTGAAAGAGGAAGGAGTTAT+TGG 0.221560 7_3:+57125498 Msa1111410:CDS
ATAACAACTTGAATCCAATT+TGG 0.233940 7_3:+57124359 Msa1111410:CDS
GGAAAATGGGTTTGTTCTTT+GGG 0.234006 7_3:+57118742 Msa1111410:exon
GCGTAGCTGTGATTGGAATT+TGG 0.234272 7_3:+57118720 Msa1111410:five_prime_UTR
TGTTGCGTCAATTCCTATTC+AGG 0.249460 7_3:+57122912 Msa1111410:CDS
TCAACACCCAAAACAATATT+AGG 0.266728 7_3:-57122883 None:intergenic
TCGAATTCCTCATTCCAAAT+TGG 0.268535 7_3:-57124373 None:intergenic
AGCAAATGATCTAAAGAATA+TGG 0.282376 7_3:+57124261 Msa1111410:CDS
TTCAGAGTGTAATCAATTCT+AGG 0.288525 7_3:-57123675 None:intergenic
CGTAGCTGTGATTGGAATTT+GGG 0.346397 7_3:+57118721 Msa1111410:five_prime_UTR
TTGGAATATAACACGGATAA+TGG 0.354649 7_3:-57123040 None:intergenic
CAGCTTAGTCTAACCTGAAT+AGG 0.359538 7_3:-57122925 None:intergenic
GTTATTCGGCGTAGCATTGA+TGG 0.368041 7_3:+57118779 Msa1111410:CDS
ATCAATCATATCTGAAAGTC+CGG 0.377576 7_3:-57123727 None:intergenic
ACAGGGAAAGATATCCATTC+AGG 0.383895 7_3:-57120128 None:intergenic
TCAGTAGTTGGTTCTGGTGC+TGG 0.393526 7_3:+57125552 Msa1111410:CDS
GGAATTGTTGGCAGTGGGCT+TGG 0.394317 7_3:+57125672 Msa1111410:CDS
CATCGGATTGTTGTTCCACT+TGG 0.398534 7_3:+57123887 Msa1111410:CDS
CTAAAGAATATGGAAATGAT+TGG 0.409580 7_3:+57124271 Msa1111410:CDS
GCAGCATCAGTAGTTGGTTC+TGG 0.412024 7_3:+57125546 Msa1111410:CDS
CGCCACAAATGGCCACAACT+TGG 0.412096 7_3:-57120422 None:intergenic
GGAAGTTTGACGGCACTTCC+CGG 0.414101 7_3:+57123708 Msa1111410:CDS
AGGCACACCTGCTCATATAC+AGG 0.414272 7_3:-57120146 None:intergenic
CTTTAAGTCGTCTCTATTCA+GGG 0.416375 7_3:-57120084 None:intergenic
GTGTAATCAATTCTAGGCTT+TGG 0.419916 7_3:-57123669 None:intergenic
AGTGGAATTGGTGCTGGAGC+TGG 0.421440 7_3:+57125618 Msa1111410:CDS
ACTGGAATCGGCGCTGGAGC+TGG 0.428890 7_3:+57125585 Msa1111410:CDS
GCTTCAGTTGAAGGATCTCC+AGG 0.430591 7_3:+57123011 Msa1111410:intron
TGATTGGAATTTGGGAAAAT+GGG 0.431805 7_3:+57118729 Msa1111410:exon
GGAGCTGGAATTGTTGGCAG+TGG 0.438232 7_3:+57125666 Msa1111410:CDS
GGGCTTGGTGCCGTTGGCAG+TGG 0.438797 7_3:+57125687 Msa1111410:CDS
GGAATGGTGGGAAGTGGAAT+TGG 0.440702 7_3:+57125606 Msa1111410:CDS
TCGAGGAACCTTGAGAATAA+AGG 0.442200 7_3:+57125122 Msa1111410:CDS
AGTGGATTCGGTGCTGGAGC+TGG 0.442751 7_3:+57125651 Msa1111410:CDS
GAATTTGGCGTAGCTGTGAT+TGG 0.444803 7_3:+57118713 Msa1111410:five_prime_UTR
AACAACAACAGCAGAAATGC+AGG 0.446070 7_3:-57123079 None:intergenic
GGAAGAACAGATGGCTGCAC+TGG 0.446678 7_3:+57125440 Msa1111410:CDS
GTGGTGAAAATTTACCTGAA+TGG 0.451737 7_3:+57120114 Msa1111410:CDS
GGAATGGTGGGAAGTGGATT+CGG 0.455276 7_3:+57125639 Msa1111410:CDS
GGTTCTGGTGCTGGACTAGT+TGG 0.455368 7_3:+57125561 Msa1111410:CDS
CGGATTGTTGTTCCACTTGG+TGG 0.456780 7_3:+57123890 Msa1111410:CDS
AAACCTCGACAGTGAGTGAC+TGG 0.457183 7_3:-57124420 None:intergenic
AACTTCAACGAAGAAATTCC+AGG 0.459075 7_3:-57121508 None:intergenic
CAGTCACTTTAAGTATTCCC+TGG 0.459434 7_3:-57124231 None:intergenic
GCAGTTGACGTTAAACTCCT+TGG 0.462122 7_3:+57120059 Msa1111410:CDS
CTTGAATCCAATTTGGAATG+AGG 0.464090 7_3:+57124366 Msa1111410:CDS
GGCAGTGGACTGAGCAAGGC+AGG 0.466321 7_3:+57125702 Msa1111410:CDS
GGTGCTGGACTAGTTGGAAC+TGG 0.470362 7_3:+57125567 Msa1111410:CDS
GACGACTTAAAGAAAATTTG+TGG 0.470475 7_3:+57120095 Msa1111410:CDS
AATTGGTGCTGGAGCTGGAA+TGG 0.471647 7_3:+57125623 Msa1111410:CDS
CACGGATAATGGTGAAAACC+TGG 0.473508 7_3:-57123029 None:intergenic
TTAGAAGAGTATAGACCTCC+TGG 0.475646 7_3:+57121490 Msa1111410:CDS
TAAAGAATATGGAAATGATT+GGG 0.477054 7_3:+57124272 Msa1111410:CDS
GGCAGTTGGCGGAAGTTTGA+CGG 0.479540 7_3:+57123698 Msa1111410:CDS
TTCATGGGCAGGACAATCAC+AGG 0.480614 7_3:+57125729 Msa1111410:CDS
GAGCTGGAATTGTTGGCAGT+GGG 0.481909 7_3:+57125667 Msa1111410:CDS
TATTTATACCTTTATTCTCA+AGG 0.481933 7_3:-57125130 None:intergenic
GGTGCTGGAGCTGGAATTGT+TGG 0.485490 7_3:+57125660 Msa1111410:CDS
GTGGGAAGTGGATTCGGTGC+TGG 0.485823 7_3:+57125645 Msa1111410:CDS
GGCAGTGGGCTTGGTGCCGT+TGG 0.486406 7_3:+57125681 Msa1111410:CDS
TCTTTAATGTGGAGGAAAGT+GGG 0.487364 7_3:+57125796 Msa1111410:CDS
ATCTTTCCCTGTATATGAGC+AGG 0.487917 7_3:+57120139 Msa1111410:CDS
GAGCAAGGCAGGAAAGTTCA+TGG 0.488649 7_3:+57125713 Msa1111410:CDS
GGACTAGTTGGAACTGGAAT+CGG 0.492348 7_3:+57125573 Msa1111410:CDS
AGTCACTTTAAGTATTCCCT+GGG 0.492552 7_3:-57124230 None:intergenic
ATCTACTCCTGTCTTTAATG+TGG 0.492962 7_3:+57125785 Msa1111410:CDS
ATTGAAAGTAAAAGATAAGA+AGG 0.493082 7_3:+57125098 Msa1111410:CDS
GTGGGAAGTGGAATTGGTGC+TGG 0.493539 7_3:+57125612 Msa1111410:CDS
GTCTTTAATGTGGAGGAAAG+TGG 0.495600 7_3:+57125795 Msa1111410:CDS
GTGGTACTCCTGTGGATACT+AGG 0.497141 7_3:+57123909 Msa1111410:CDS
CGAATATGCACAACTACGTA+AGG 0.497415 7_3:-57124304 None:intergenic
GTTGGAACTGGAATCGGCGC+TGG 0.499067 7_3:+57125579 Msa1111410:CDS
AATCGGCGCTGGAGCTGGAA+TGG 0.499597 7_3:+57125590 Msa1111410:CDS
GCGTAGCATTGATGGCTGGA+TGG 0.502557 7_3:+57118787 Msa1111410:CDS
GTCCAAGTTGTGGCCATTTG+TGG 0.503937 7_3:+57120420 Msa1111410:CDS
GACGGAGCAGCATCAGTAGT+TGG 0.508775 7_3:+57125540 Msa1111410:CDS
TTACTCACATCCGCCACAAA+TGG 0.515079 7_3:-57120433 None:intergenic
CAACAATCCGATGAGGCCAT+TGG 0.515146 7_3:-57123877 None:intergenic
GGAGCTGGAATGGTGGGAAG+TGG 0.515418 7_3:+57125600 Msa1111410:CDS
GGAGCTGGAATGGTGGGAAG+TGG 0.515418 7_3:+57125633 Msa1111410:CDS
ATGAGGCCATTGGAGCATAT+CGG 0.516196 7_3:-57123867 None:intergenic
AGTGTTCAATCTATTTCCAA+TGG 0.516240 7_3:-57125967 None:intergenic
AAAGGTTACCTCAGCAAGTA+GGG 0.517219 7_3:-57123103 None:intergenic
CAAAGGTTACCTCAGCAAGT+AGG 0.517568 7_3:-57123104 None:intergenic
CCTGGAAGCAGAAACTGAAA+AGG 0.518313 7_3:+57125041 Msa1111410:CDS
AAGTTCAGTAAGCTGTCCCT+TGG 0.527726 7_3:+57121526 Msa1111410:CDS
GGCGCTGGAGCTGGAATGGT+GGG 0.527757 7_3:+57125594 Msa1111410:CDS
ATATGCTCCAATGGCCTCAT+CGG 0.533627 7_3:+57123870 Msa1111410:CDS
CGTAGCATTGATGGCTGGAT+GGG 0.533942 7_3:+57118788 Msa1111410:CDS
TCTGCTTCCAGGTTAATAAG+TGG 0.538169 7_3:-57125030 None:intergenic
TTCGGCGTAGCATTGATGGC+TGG 0.539361 7_3:+57118783 Msa1111410:CDS
TGATCTGGAGCTTAAACCCC+AGG 0.542723 7_3:+57124213 Msa1111410:CDS
ATAGATTGAACACTAATAGC+AGG 0.545590 7_3:+57125976 Msa1111410:three_prime_UTR
CGGCGCTGGAGCTGGAATGG+TGG 0.546378 7_3:+57125593 Msa1111410:CDS
CGTTGGCAGTGGACTGAGCA+AGG 0.551865 7_3:+57125698 Msa1111410:CDS
CGACTTGATTGCAGAAGACA+AGG 0.553113 7_3:+57124393 Msa1111410:CDS
ATTGGGCAAGATAAACGATT+GGG 0.553397 7_3:+57124994 Msa1111410:CDS
AGGCAGGAAAGTTCATGGGC+AGG 0.553405 7_3:+57125718 Msa1111410:CDS
GATTACACTCTGAAGGCAGT+TGG 0.555212 7_3:+57123684 Msa1111410:CDS
CTTTCCTCCACATTAAAGAC+AGG 0.556324 7_3:-57125792 None:intergenic
TAGAATTGATTACACTCTGA+AGG 0.557093 7_3:+57123677 Msa1111410:CDS
ATACCTTAGCAATTCTCTTG+CGG 0.559331 7_3:-57118833 None:intergenic
TCCACTTGGTGGTACTCCTG+TGG 0.560366 7_3:+57123901 Msa1111410:CDS
AGGAAGAAACTGAAAGAGGA+AGG 0.561072 7_3:+57125489 Msa1111410:CDS
TACACTCTGAAGGCAGTTGG+CGG 0.565095 7_3:+57123687 Msa1111410:CDS
AGGGGATCTCTTCTGCGAGT+TGG 0.573126 7_3:-57123059 None:intergenic
TACTCCTGTCTTTAATGTGG+AGG 0.574175 7_3:+57125788 Msa1111410:CDS
CATTGGGCAAGATAAACGAT+TGG 0.574761 7_3:+57124993 Msa1111410:CDS
ACAAGCAGCTGTCCAAGTTG+TGG 0.582444 7_3:+57120410 Msa1111410:CDS
AGAAAATGACACTAGAACAA+AGG 0.582456 7_3:+57125469 Msa1111410:CDS
TGTTGTTGCCCTACTTGCTG+AGG 0.583278 7_3:+57123095 Msa1111410:CDS
AAAATTGCCACTTATTAACC+TGG 0.583892 7_3:+57125023 Msa1111410:CDS
TTGTTACCGATATGCTCCAA+TGG 0.587786 7_3:+57123861 Msa1111410:CDS
ACAAAGGAAGAAACTGAAAG+AGG 0.591207 7_3:+57125485 Msa1111410:CDS
TCAATCATATCTGAAAGTCC+GGG 0.592040 7_3:-57123726 None:intergenic
CGTCTCTATTCAGGGATCCA+AGG 0.592966 7_3:-57120076 None:intergenic
ATTTAACAAGGAAGAACAGA+TGG 0.593114 7_3:+57125431 Msa1111410:CDS
GGTGCTGGAGCTGGAATGGT+GGG 0.593307 7_3:+57125627 Msa1111410:CDS
AGCAAGGCAGGAAAGTTCAT+GGG 0.593411 7_3:+57125714 Msa1111410:CDS
CTTGCTCAGTCCACTGCCAA+CGG 0.593603 7_3:-57125697 None:intergenic
GACAGGAGTAGATGAACCGC+TGG 0.594016 7_3:-57125775 None:intergenic
TGGTGCTGGAGCTGGAATGG+TGG 0.595978 7_3:+57125626 Msa1111410:CDS
CTTTAATGTGGAGGAAAGTG+GGG 0.602558 7_3:+57125797 Msa1111410:CDS
CAAGTTGTGGCCATTTGTGG+CGG 0.614878 7_3:+57120423 Msa1111410:CDS
CTGCGAGTTGGAATATAACA+CGG 0.615766 7_3:-57123047 None:intergenic
AAGCCGCAAGAGAATTGCTA+AGG 0.617810 7_3:+57118830 Msa1111410:CDS
AGTACAATGGACGCGCTAGA+CGG 0.619163 7_3:+57125522 Msa1111410:CDS
AACCTCGACAGTGAGTGACT+GGG 0.624024 7_3:-57124419 None:intergenic
AGGAGTTATTGGAAGTACAA+TGG 0.624734 7_3:+57125509 Msa1111410:CDS
CAGGGCAAACTGTATCGAGA+AGG 0.626227 7_3:+57125748 Msa1111410:CDS
TCACACTACCTAGTATCCAC+AGG 0.626835 7_3:-57123917 None:intergenic
GTAAAAGATAAGAAGGATCG+AGG 0.631810 7_3:+57125105 Msa1111410:CDS
TTTAATGTGGAGGAAAGTGG+GGG 0.634849 7_3:+57125798 Msa1111410:CDS
GACCCAGTCACTCACTGTCG+AGG 0.635610 7_3:+57124417 Msa1111410:CDS
GGTCTATACTCTTCTAATAG+CGG 0.643171 7_3:-57121484 None:intergenic
ACTCTTTAAAGTCAAAACAA+AGG 0.644094 7_3:+57124330 Msa1111410:CDS
ACAACAACAGCAGAAATGCA+GGG 0.646634 7_3:-57123078 None:intergenic
TTTCTATCATGAATTTAACA+AGG 0.648565 7_3:+57125419 Msa1111410:CDS
CTGAAAAGGAAATTGAACTG+AGG 0.654965 7_3:+57125055 Msa1111410:CDS
CAACAACAGCAGAAATGCAG+GGG 0.674311 7_3:-57123077 None:intergenic
TCCACAGGAGTACCACCAAG+TGG 0.679811 7_3:-57123902 None:intergenic
GAATATGCACAACTACGTAA+GGG 0.686841 7_3:-57124303 None:intergenic
GGCACACCTGCTCATATACA+GGG 0.691019 7_3:-57120145 None:intergenic
GTATCGAGAAGGAGTGCCAG+CGG 0.703865 7_3:+57125759 Msa1111410:CDS
GTCACTTTAAGTATTCCCTG+GGG 0.708077 7_3:-57124229 None:intergenic
GATCTGGAGCTTAAACCCCA+GGG 0.715206 7_3:+57124214 Msa1111410:CDS
TCATGGGCAGGACAATCACA+GGG 0.718450 7_3:+57125730 Msa1111410:CDS
AGTGGAACAACAATCCGATG+AGG 0.732800 7_3:-57123884 None:intergenic
TTCAACGAAGAAATTCCAGG+AGG 0.772265 7_3:-57121505 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTTAAAAATTTCAAATTT+TGG - chr7_3:57119619-57119638 None:intergenic 10.0%
!!! ATTTCTTTTGTTAAATAAAA+TGG - chr7_3:57119974-57119993 None:intergenic 10.0%
!! TAAAATACTATTAAATGAAA+CGG + chr7_3:57122468-57122487 Msa1111410:intron 10.0%
!!! ATTTTTTCATATAGTATTTT+AGG - chr7_3:57122527-57122546 None:intergenic 10.0%
!!! AAATATTGATTATCAAATAT+AGG - chr7_3:57124013-57124032 None:intergenic 10.0%
!!! CAAATATTTTAAATTACTTA+AGG + chr7_3:57124174-57124193 Msa1111410:intron 10.0%
!! ACAAATCAATAAAAAATTAA+GGG - chr7_3:57124831-57124850 None:intergenic 10.0%
!! AACAAATCAATAAAAAATTA+AGG - chr7_3:57124832-57124851 None:intergenic 10.0%
!! AATAATTCATCAACTTTATT+TGG - chr7_3:57118908-57118927 None:intergenic 15.0%
!! AAGAAAAAAGAAAAATGAAA+AGG + chr7_3:57119878-57119897 Msa1111410:intron 15.0%
!! AGAAAAAAGAAAAATGAAAA+GGG + chr7_3:57119879-57119898 Msa1111410:intron 15.0%
!!! AAACTCTATTTATTGTTTTT+TGG + chr7_3:57120275-57120294 Msa1111410:intron 15.0%
!!! ATTAGTTTGTTTATTTGTTA+TGG + chr7_3:57120550-57120569 Msa1111410:intron 15.0%
!!! CTACTTTTTAATGTATTTAA+AGG + chr7_3:57122395-57122414 Msa1111410:intron 15.0%
!! TTAATGTATTTAAAGGATAA+AGG + chr7_3:57122402-57122421 Msa1111410:intron 15.0%
!! TATCATAAAGATACAAAATA+TGG - chr7_3:57122450-57122469 None:intergenic 15.0%
!! TTCAATTAGAATATTGAATA+AGG - chr7_3:57123558-57123577 None:intergenic 15.0%
!!! TCATTAGGAATTTATTTTTT+AGG + chr7_3:57124570-57124589 Msa1111410:intron 15.0%
!!! TTTCATAATAGAATAGTTTT+GGG - chr7_3:57124763-57124782 None:intergenic 15.0%
!!! TTTTCATAATAGAATAGTTT+TGG - chr7_3:57124764-57124783 None:intergenic 15.0%
!! CAAATCAATAAAAAATTAAG+GGG - chr7_3:57124830-57124849 None:intergenic 15.0%
!!! TTATTTTATTGAATCAATCA+TGG - chr7_3:57124928-57124947 None:intergenic 15.0%
!! ATTATTAGAAAAGAAATAGA+AGG - chr7_3:57125301-57125320 None:intergenic 15.0%
!! CTTCTATTCAAAATTGAATT+TGG + chr7_3:57118698-57118717 Msa1111410:five_prime_UTR 20.0%
!! AAATTCCACTAATATGTTAT+TGG - chr7_3:57119332-57119351 None:intergenic 20.0%
!! GTACTAACTGTAATTTATTA+TGG + chr7_3:57119928-57119947 Msa1111410:intron 20.0%
!! TAACTGTAATTTATTATGGT+AGG + chr7_3:57119932-57119951 Msa1111410:intron 20.0%
!!! AAATGTCATGTATTAATTTG+TGG + chr7_3:57119990-57120009 Msa1111410:intron 20.0%
!! TTTGCTTAAAAATAAAGGAA+GGG - chr7_3:57120332-57120351 None:intergenic 20.0%
!!! TTTTGCTTAAAAATAAAGGA+AGG - chr7_3:57120333-57120352 None:intergenic 20.0%
!!! CACTTTTTGCTTAAAAATAA+AGG - chr7_3:57120337-57120356 None:intergenic 20.0%
!!! CTTTATTTTTAAGCAAAAAG+TGG + chr7_3:57120335-57120354 Msa1111410:intron 20.0%
!! AGGGTCAAATAAAAAAATAT+GGG - chr7_3:57121998-57122017 None:intergenic 20.0%
!! TAGGGTCAAATAAAAAAATA+TGG - chr7_3:57121999-57122018 None:intergenic 20.0%
!! TAATTGATATCCAATGATAT+TGG + chr7_3:57122090-57122109 Msa1111410:intron 20.0%
!!! TCTGTTTTTAAATTTTAGAG+AGG + chr7_3:57122201-57122220 Msa1111410:intron 20.0%
!! TGAAACGGATAAATAAAATT+TGG + chr7_3:57122483-57122502 Msa1111410:intron 20.0%
!! ACTATATGAAAAAATACTTC+AGG + chr7_3:57122532-57122551 Msa1111410:intron 20.0%
!! AAAATTGATAGAAAAGACAA+GGG - chr7_3:57122735-57122754 None:intergenic 20.0%
!! AAAAATTGATAGAAAAGACA+AGG - chr7_3:57122736-57122755 None:intergenic 20.0%
!! TAAAAAAGGTCAAATCATAA+TGG + chr7_3:57122834-57122853 Msa1111410:CDS 20.0%
!!! AATCGAATTTGAAATTTTTG+TGG + chr7_3:57124035-57124054 Msa1111410:intron 20.0%
!! TAAAGAATATGGAAATGATT+GGG + chr7_3:57124272-57124291 Msa1111410:CDS 20.0%
!! GAAGAAATAAGAAATTCATT+AGG + chr7_3:57124555-57124574 Msa1111410:intron 20.0%
!!! TTTATTGATTTGTTTCTACA+CGG + chr7_3:57124838-57124857 Msa1111410:intron 20.0%
!! ATTGAAAGTAAAAGATAAGA+AGG + chr7_3:57125098-57125117 Msa1111410:CDS 20.0%
!! TATTTATACCTTTATTCTCA+AGG - chr7_3:57125133-57125152 None:intergenic 20.0%
!! TTTCTATCATGAATTTAACA+AGG + chr7_3:57125419-57125438 Msa1111410:CDS 20.0%
!!! ACCTGAATATTTTAGTTTTT+GGG + chr7_3:57125878-57125897 Msa1111410:three_prime_UTR 20.0%
! TCTTAAACACGTTTCTAAAT+TGG + chr7_3:57118642-57118661 Msa1111410:five_prime_UTR 25.0%
! TTTATTTGGACATTACGAAT+TGG - chr7_3:57118894-57118913 None:intergenic 25.0%
!! TTATTTAAGATGTGATCAGT+TGG + chr7_3:57118923-57118942 Msa1111410:intron 25.0%
! ATGAACTATGTTTGGTATTA+TGG - chr7_3:57119087-57119106 None:intergenic 25.0%
! TTAACAAAAATTGATCATGC+TGG + chr7_3:57119130-57119149 Msa1111410:intron 25.0%
!! CTAATATGTTATTGGTTGTT+TGG - chr7_3:57119324-57119343 None:intergenic 25.0%
! AACAACCAATAACATATTAG+TGG + chr7_3:57119324-57119343 Msa1111410:intron 25.0%
!! TGGAATTTGACTTATTAGTA+AGG + chr7_3:57119344-57119363 Msa1111410:intron 25.0%
! TAGGTGAAAAAGAATCATAT+AGG + chr7_3:57119391-57119410 Msa1111410:intron 25.0%
! AGGTGAAAAAGAATCATATA+GGG + chr7_3:57119392-57119411 Msa1111410:intron 25.0%
!! TTGATTAGAACTGTTGATTA+TGG + chr7_3:57120626-57120645 Msa1111410:intron 25.0%
!! TGATTAGAACTGTTGATTAT+GGG + chr7_3:57120627-57120646 Msa1111410:intron 25.0%
! TAGATCCATTTATGGATTTA+TGG - chr7_3:57120853-57120872 None:intergenic 25.0%
! TTAGGTTTATTCATGTTATC+TGG - chr7_3:57120962-57120981 None:intergenic 25.0%
! TTACACTGAAATAAACAAGA+CGG + chr7_3:57121054-57121073 Msa1111410:intron 25.0%
!!! TTGTTTGTGTTTGCTTTTTT+AGG + chr7_3:57121429-57121448 Msa1111410:intron 25.0%
! AAAATCTTGTAACATGAATC+AGG - chr7_3:57121812-57121831 None:intergenic 25.0%
! GGGTGAAAAAACAAAAAATA+TGG - chr7_3:57121870-57121889 None:intergenic 25.0%
! ATTAAGGTATAAGAGACAAA+AGG - chr7_3:57121958-57121977 None:intergenic 25.0%
! TTGTCTCTTATACCTTAATT+TGG + chr7_3:57121959-57121978 Msa1111410:intron 25.0%
! ATTAGGTTATATTTGTGCAT+TGG - chr7_3:57122258-57122277 None:intergenic 25.0%
!! TAACAACAATTTTGCTTGTT+AGG + chr7_3:57122580-57122599 Msa1111410:intron 25.0%
! AAAATGTTGACAGCATTAAT+AGG + chr7_3:57122618-57122637 Msa1111410:intron 25.0%
! AAATTGATAGAAAAGACAAG+GGG - chr7_3:57122734-57122753 None:intergenic 25.0%
!! AACTTTAGATTGATTTATCC+CGG - chr7_3:57123206-57123225 None:intergenic 25.0%
! TTATATCAACTTCATCTTGT+GGG - chr7_3:57123305-57123324 None:intergenic 25.0%
! CCACTTAATTCAAAATCTAA+GGG - chr7_3:57123492-57123511 None:intergenic 25.0%
! TCCACTTAATTCAAAATCTA+AGG - chr7_3:57123493-57123512 None:intergenic 25.0%
! GAATTCTGCATTACTTTATT+CGG + chr7_3:57123575-57123594 Msa1111410:intron 25.0%
! AATCAGTTTAAGAGGAAAAA+GGG - chr7_3:57123776-57123795 None:intergenic 25.0%
! AAATCAGTTTAAGAGGAAAA+AGG - chr7_3:57123777-57123796 None:intergenic 25.0%
! TTCTTCAAAATCAGTTTAAG+AGG - chr7_3:57123784-57123803 None:intergenic 25.0%
!! TATTTTACCCACTATTTCAT+AGG + chr7_3:57123823-57123842 Msa1111410:intron 25.0%
! AAGAGACAAAAACATTGAAA+CGG - chr7_3:57124088-57124107 None:intergenic 25.0%
! TTGAGCATTAACATCAAAAT+TGG - chr7_3:57124157-57124176 None:intergenic 25.0%
! AGCAAATGATCTAAAGAATA+TGG + chr7_3:57124261-57124280 Msa1111410:CDS 25.0%
! CTAAAGAATATGGAAATGAT+TGG + chr7_3:57124271-57124290 Msa1111410:CDS 25.0%
!!! TTTGTTTTGACTTTAAAGAG+TGG - chr7_3:57124331-57124350 None:intergenic 25.0%
!!! ACTCTTTAAAGTCAAAACAA+AGG + chr7_3:57124330-57124349 Msa1111410:CDS 25.0%
! ATAACAACTTGAATCCAATT+TGG + chr7_3:57124359-57124378 Msa1111410:CDS 25.0%
!!! ATTTTGCTTTCATTAGTTCT+AGG + chr7_3:57124499-57124518 Msa1111410:intron 25.0%
!! TAGGTTTTTGATAAAGACAT+TGG + chr7_3:57124976-57124995 Msa1111410:intron 25.0%
!! AGGTTTTTGATAAAGACATT+GGG + chr7_3:57124977-57124996 Msa1111410:intron 25.0%
! ATAAATAGACATGCATTTGT+TGG + chr7_3:57125146-57125165 Msa1111410:intron 25.0%
! TAAATAGACATGCATTTGTT+GGG + chr7_3:57125147-57125166 Msa1111410:intron 25.0%
! TTCAAACTTGTGATGTAATT+AGG - chr7_3:57125240-57125259 None:intergenic 25.0%
! TAAATGAATACAGAATAGCA+AGG - chr7_3:57125347-57125366 None:intergenic 25.0%
!!! GACCTGAATATTTTAGTTTT+TGG + chr7_3:57125877-57125896 Msa1111410:three_prime_UTR 25.0%
! TCCCAAAAACTAAAATATTC+AGG - chr7_3:57125882-57125901 None:intergenic 25.0%
!!! TAATATGATGCTTTTTCCAT+TGG + chr7_3:57125951-57125970 Msa1111410:three_prime_UTR 25.0%
TGATTGGAATTTGGGAAAAT+GGG + chr7_3:57118729-57118748 Msa1111410:exon 30.0%
!!! TTTGTTCTTTGGGATTTTTC+TGG + chr7_3:57118752-57118771 Msa1111410:CDS 30.0%
!!! TTGTTCTTTGGGATTTTTCT+GGG + chr7_3:57118753-57118772 Msa1111410:CDS 30.0%
TATCATGCTTAGTGTTTGTT+TGG + chr7_3:57118966-57118985 Msa1111410:intron 30.0%
AACTATGTTTGGTATTATGG+TGG - chr7_3:57119084-57119103 None:intergenic 30.0%
TACACTCTATGAACTATGTT+TGG - chr7_3:57119095-57119114 None:intergenic 30.0%
TAGTTCATAGAGTGTATGTT+TGG + chr7_3:57119099-57119118 Msa1111410:intron 30.0%
! ATTGATTCTAATGTGAAGCT+AGG - chr7_3:57119237-57119256 None:intergenic 30.0%
! GATATAAGAGTGTGTAATCT+AGG + chr7_3:57119372-57119391 Msa1111410:intron 30.0%
AATCAATGTCCCTCTATATA+CGG + chr7_3:57119449-57119468 Msa1111410:intron 30.0%
TAATCATAATCACACACAGA+AGG + chr7_3:57119517-57119536 Msa1111410:intron 30.0%
TCATATAAGTCTCCTCAAAA+AGG - chr7_3:57119547-57119566 None:intergenic 30.0%
AACAAAGTCTGAGAATTTGT+AGG - chr7_3:57119672-57119691 None:intergenic 30.0%
GAAGAAGACAAGAAAAACAA+GGG + chr7_3:57119854-57119873 Msa1111410:intron 30.0%
AATGAAAAGGGAAACATAGT+AGG + chr7_3:57119891-57119910 Msa1111410:intron 30.0%
!! CATTATTCATTTTTCTCTGC+AGG + chr7_3:57120037-57120056 Msa1111410:intron 30.0%
GACGACTTAAAGAAAATTTG+TGG + chr7_3:57120095-57120114 Msa1111410:CDS 30.0%
TTTACAAACGATCCTATCAT+AGG + chr7_3:57120210-57120229 Msa1111410:intron 30.0%
AAAGAGAACAGACATAGTAT+AGG - chr7_3:57120303-57120322 None:intergenic 30.0%
! TTTGAGTTTCTGAACTATGT+GGG - chr7_3:57120686-57120705 None:intergenic 30.0%
! ATTTGAGTTTCTGAACTATG+TGG - chr7_3:57120687-57120706 None:intergenic 30.0%
TTCTGATAAAATCTATGCTG+AGG + chr7_3:57120726-57120745 Msa1111410:intron 30.0%
GTATCTATTTATACATCGTG+CGG + chr7_3:57120818-57120837 Msa1111410:intron 30.0%
CAACTCCATAAATCCATAAA+TGG + chr7_3:57120845-57120864 Msa1111410:intron 30.0%
GAATGAAAGCCAAAGTTTAA+AGG - chr7_3:57121349-57121368 None:intergenic 30.0%
TTTCATTCCTAATCTTCCTT+TGG + chr7_3:57121361-57121380 Msa1111410:intron 30.0%
TTCATTCCTAATCTTCCTTT+GGG + chr7_3:57121362-57121381 Msa1111410:intron 30.0%
TATATTTGAATCCACCTAGT+TGG + chr7_3:57121662-57121681 Msa1111410:intron 30.0%
GTGTATAAAGTCAGATAATG+CGG + chr7_3:57121744-57121763 Msa1111410:intron 30.0%
!! CTTCTGATTTTTGAAGAAAC+GGG - chr7_3:57121890-57121909 None:intergenic 30.0%
!! CCTTCTGATTTTTGAAGAAA+CGG - chr7_3:57121891-57121910 None:intergenic 30.0%
TTTCTTCAAAAATCAGAAGG+AGG + chr7_3:57121891-57121910 Msa1111410:intron 30.0%
TATAAGAGACAAAAGGAGAA+AGG - chr7_3:57121951-57121970 None:intergenic 30.0%
! CTCTTATACCTTAATTTGGT+TGG + chr7_3:57121963-57121982 Msa1111410:intron 30.0%
!! TTTTTATTTGACCCTACCTT+TGG + chr7_3:57122003-57122022 Msa1111410:intron 30.0%
ATATAACCTAATCTTCCTTG+TGG + chr7_3:57122266-57122285 Msa1111410:intron 30.0%
! ATAGAGATTTTCTTTCCACA+AGG - chr7_3:57122284-57122303 None:intergenic 30.0%
! CAAGCAAAATTGTTGTTACA+AGG - chr7_3:57122578-57122597 None:intergenic 30.0%
TTATTGAACAATACTGACAG+GGG - chr7_3:57122675-57122694 None:intergenic 30.0%
CTTATTGAACAATACTGACA+GGG - chr7_3:57122676-57122695 None:intergenic 30.0%
!!! TAATGGACATTGATTTTCGT+TGG + chr7_3:57122851-57122870 Msa1111410:CDS 30.0%
!!! AATGGACATTGATTTTCGTT+GGG + chr7_3:57122852-57122871 Msa1111410:CDS 30.0%
! GGTGATCCTAATATTGTTTT+GGG + chr7_3:57122877-57122896 Msa1111410:CDS 30.0%
TCAACACCCAAAACAATATT+AGG - chr7_3:57122886-57122905 None:intergenic 30.0%
TAATGAATTTCATGTCACTG+AGG + chr7_3:57122956-57122975 Msa1111410:intron 30.0%
TTGGAATATAACACGGATAA+TGG - chr7_3:57123043-57123062 None:intergenic 30.0%
! TATTTGCACAAACCATTTTG+TGG + chr7_3:57123177-57123196 Msa1111410:intron 30.0%
! ATTTGCACAAACCATTTTGT+GGG + chr7_3:57123178-57123197 Msa1111410:intron 30.0%
CTTATATCAACTTCATCTTG+TGG - chr7_3:57123306-57123325 None:intergenic 30.0%
GAACATAAGTTCCATATGAA+GGG - chr7_3:57123388-57123407 None:intergenic 30.0%
TGAACATAAGTTCCATATGA+AGG - chr7_3:57123389-57123408 None:intergenic 30.0%
AACATCCTACAATGGTAAAT+CGG - chr7_3:57123442-57123461 None:intergenic 30.0%
! CCCTTAGATTTTGAATTAAG+TGG + chr7_3:57123489-57123508 Msa1111410:intron 30.0%
! AGATTTTGAATTAAGTGGAC+TGG + chr7_3:57123494-57123513 Msa1111410:intron 30.0%
!! GATTTTGAATTAAGTGGACT+GGG + chr7_3:57123495-57123514 Msa1111410:intron 30.0%
!! AATTTCTGTTTCTATTCCCT+TGG + chr7_3:57123532-57123551 Msa1111410:intron 30.0%
AGAATATTGAATAAGGCCAA+GGG - chr7_3:57123551-57123570 None:intergenic 30.0%
TAGAATATTGAATAAGGCCA+AGG - chr7_3:57123552-57123571 None:intergenic 30.0%
TTGGCTGATTAAATGTTTCA+TGG - chr7_3:57123653-57123672 None:intergenic 30.0%
TTCAGAGTGTAATCAATTCT+AGG - chr7_3:57123678-57123697 None:intergenic 30.0%
TAGAATTGATTACACTCTGA+AGG + chr7_3:57123677-57123696 Msa1111410:CDS 30.0%
ATCAATCATATCTGAAAGTC+CGG - chr7_3:57123730-57123749 None:intergenic 30.0%
ACAGTATCCTATGAAATAGT+GGG - chr7_3:57123833-57123852 None:intergenic 30.0%
AGGGTAAACAAATTCTGATT+TGG + chr7_3:57124124-57124143 Msa1111410:intron 30.0%
ATCTTCCTCAATTATGCTTA+TGG + chr7_3:57124533-57124552 Msa1111410:intron 30.0%
TTCTTCCATAAGCATAATTG+AGG - chr7_3:57124541-57124560 None:intergenic 30.0%
ATAACGTGATAGTAACTGAA+TGG - chr7_3:57124685-57124704 None:intergenic 30.0%
! ATTTTCATGACTCTGCAAAT+AGG + chr7_3:57124957-57124976 Msa1111410:intron 30.0%
! AAAATTGCCACTTATTAACC+TGG + chr7_3:57125023-57125042 Msa1111410:CDS 30.0%
AGGTTTCTTTACTGTAGTTT+GGG - chr7_3:57125281-57125300 None:intergenic 30.0%
AAGGTTTCTTTACTGTAGTT+TGG - chr7_3:57125282-57125301 None:intergenic 30.0%
! CTTTTCTAATAATGCTTACG+CGG + chr7_3:57125308-57125327 Msa1111410:intron 30.0%
ATTTAACAAGGAAGAACAGA+TGG + chr7_3:57125431-57125450 Msa1111410:CDS 30.0%
AGAAAATGACACTAGAACAA+AGG + chr7_3:57125469-57125488 Msa1111410:CDS 30.0%
AGTGTTCAATCTATTTCCAA+TGG - chr7_3:57125970-57125989 None:intergenic 30.0%
ATAGATTGAACACTAATAGC+AGG + chr7_3:57125976-57125995 Msa1111410:three_prime_UTR 30.0%
GTGATTGGAATTTGGGAAAA+TGG + chr7_3:57118728-57118747 Msa1111410:exon 35.0%
! GGAAAATGGGTTTGTTCTTT+GGG + chr7_3:57118742-57118761 Msa1111410:exon 35.0%
!!! TGTTCTTTGGGATTTTTCTG+GGG + chr7_3:57118754-57118773 Msa1111410:CDS 35.0%
!!! ATTTTTCTGGGGGTGTTATT+CGG + chr7_3:57118765-57118784 Msa1111410:CDS 35.0%
ATACCTTAGCAATTCTCTTG+CGG - chr7_3:57118836-57118855 None:intergenic 35.0%
! AGTGTTTGTTTGGTTCCAAA+TGG + chr7_3:57118976-57118995 Msa1111410:intron 35.0%
TGATTTCGACAAACACCATT+TGG - chr7_3:57118994-57119013 None:intergenic 35.0%
AATCATATAGGGCTGTGAAA+GGG + chr7_3:57119403-57119422 Msa1111410:intron 35.0%
ATCAATGTCCCTCTATATAC+GGG + chr7_3:57119450-57119469 Msa1111410:intron 35.0%
AGAGAAAAGTTTCCAATACC+AGG - chr7_3:57119487-57119506 None:intergenic 35.0%
! CTCAGACTTTGTTGTCTATT+TGG + chr7_3:57119679-57119698 Msa1111410:intron 35.0%
GAATTGACTAGCATTAATCG+AGG - chr7_3:57119739-57119758 None:intergenic 35.0%
CGATTAATGCTAGTCAATTC+AGG + chr7_3:57119739-57119758 Msa1111410:intron 35.0%
! GTGTAGTGGAAAAACAGAAT+AGG - chr7_3:57119796-57119815 None:intergenic 35.0%
CGAAGAAGACAAGAAAAACA+AGG + chr7_3:57119853-57119872 Msa1111410:intron 35.0%
CTTTAAGTCGTCTCTATTCA+GGG - chr7_3:57120087-57120106 None:intergenic 35.0%
TCTTTAAGTCGTCTCTATTC+AGG - chr7_3:57120088-57120107 None:intergenic 35.0%
GTGGTGAAAATTTACCTGAA+TGG + chr7_3:57120114-57120133 Msa1111410:CDS 35.0%
AAATGTTTGACCCTTGTTCA+TGG + chr7_3:57120364-57120383 Msa1111410:intron 35.0%
AATGTTTGACCCTTGTTCAT+GGG + chr7_3:57120365-57120384 Msa1111410:intron 35.0%
CTGAAAAAACCCATGAACAA+GGG - chr7_3:57120377-57120396 None:intergenic 35.0%
!!! ATGGGTTTTTTCAGGTGAAA+TGG + chr7_3:57120383-57120402 Msa1111410:intron 35.0%
TCGTTCAAACTGAACAATTG+GGG - chr7_3:57120599-57120618 None:intergenic 35.0%
CTCGTTCAAACTGAACAATT+GGG - chr7_3:57120600-57120619 None:intergenic 35.0%
TCTCGTTCAAACTGAACAAT+TGG - chr7_3:57120601-57120620 None:intergenic 35.0%
! CAAATCAAAAGCACGAAAAC+TGG + chr7_3:57120702-57120721 Msa1111410:intron 35.0%
AGGGATTGTAGATCCATTTA+TGG - chr7_3:57120861-57120880 None:intergenic 35.0%
AAATGGATCTACAATCCCTA+CGG + chr7_3:57120862-57120881 Msa1111410:intron 35.0%
TTTGTGACTTCGTTTATGCT+GGG - chr7_3:57120939-57120958 None:intergenic 35.0%
ACAATCATGTCAACTACGTT+AGG - chr7_3:57120980-57120999 None:intergenic 35.0%
GTATGATTGCGATTATGCTA+AGG + chr7_3:57121085-57121104 Msa1111410:intron 35.0%
! CGAACATACAGTGTTTTCAA+AGG - chr7_3:57121246-57121265 None:intergenic 35.0%
! CTTTTCGTTTAAGGAATGCA+AGG - chr7_3:57121301-57121320 None:intergenic 35.0%
GGTCTATACTCTTCTAATAG+CGG - chr7_3:57121487-57121506 None:intergenic 35.0%
AACTTCAACGAAGAAATTCC+AGG - chr7_3:57121511-57121530 None:intergenic 35.0%
ACTGTTGCTCCAAAAATTGA+AGG + chr7_3:57121550-57121569 Msa1111410:CDS 35.0%
!! GGATTGGTACCTTCAATTTT+TGG - chr7_3:57121562-57121581 None:intergenic 35.0%
AATGAAGAAAGGAATCTGTG+TGG - chr7_3:57121583-57121602 None:intergenic 35.0%
ACAGGAAAAGCAATGAAGAA+AGG - chr7_3:57121594-57121613 None:intergenic 35.0%
! CTTTTCCTGTTTGCACATTA+TGG + chr7_3:57121604-57121623 Msa1111410:intron 35.0%
AGCATTCGTAAAATTCAGCA+GGG - chr7_3:57121724-57121743 None:intergenic 35.0%
! TAGTCCTAGATAACTTGCAT+CGG - chr7_3:57121837-57121856 None:intergenic 35.0%
CCGTTTCTTCAAAAATCAGA+AGG + chr7_3:57121888-57121907 Msa1111410:intron 35.0%
AAATCAGAAGGAGGAAAACA+TGG + chr7_3:57121900-57121919 Msa1111410:intron 35.0%
! ATACCTTAATTTGGTTGGAG+AGG + chr7_3:57121968-57121987 Msa1111410:intron 35.0%
TTTCCTCTCCAACCAAATTA+AGG - chr7_3:57121974-57121993 None:intergenic 35.0%
GTATAACATAACAAGGCCAA+AGG - chr7_3:57122022-57122041 None:intergenic 35.0%
! GCCTTGTTATGTTATACTTG+TGG + chr7_3:57122025-57122044 Msa1111410:intron 35.0%
GCCACAAGTATAACATAACA+AGG - chr7_3:57122029-57122048 None:intergenic 35.0%
TTATACTTGTGGCTTCTCAT+GGG + chr7_3:57122036-57122055 Msa1111410:intron 35.0%
CCAAAACTCTCCAATATCAT+TGG - chr7_3:57122103-57122122 None:intergenic 35.0%
! CCAATGATATTGGAGAGTTT+TGG + chr7_3:57122100-57122119 Msa1111410:intron 35.0%
TTCTTTCCACAAGGAAGATT+AGG - chr7_3:57122275-57122294 None:intergenic 35.0%
AATTGTAGTTCATAGCGAGA+AGG + chr7_3:57122308-57122327 Msa1111410:intron 35.0%
AAAGTAGTTTCCACCATAAG+AGG - chr7_3:57122382-57122401 None:intergenic 35.0%
CCTTATTGAACAATACTGAC+AGG - chr7_3:57122677-57122696 None:intergenic 35.0%
CCTGTCAGTATTGTTCAATA+AGG + chr7_3:57122674-57122693 Msa1111410:intron 35.0%
!! CATAATTTGTTCATCCATGC+AGG + chr7_3:57122793-57122812 Msa1111410:intron 35.0%
CGTGTTCAGAGTCTTAAAAA+AGG + chr7_3:57122820-57122839 Msa1111410:CDS 35.0%
!!! ATGGACATTGATTTTCGTTG+GGG + chr7_3:57122853-57122872 Msa1111410:CDS 35.0%
! CGGTGATCCTAATATTGTTT+TGG + chr7_3:57122876-57122895 Msa1111410:CDS 35.0%
AACAGCAAATTGAGAAACTC+AGG - chr7_3:57123149-57123168 None:intergenic 35.0%
!! ACAGAACATTGACTTGAAGT+TGG + chr7_3:57123231-57123250 Msa1111410:intron 35.0%
! GTTTTCACTTCAAGATTGTG+TGG + chr7_3:57123262-57123281 Msa1111410:intron 35.0%
AGATAATTGAGCCCTTCATA+TGG + chr7_3:57123374-57123393 Msa1111410:intron 35.0%
CAGAAGCAGATAGTTAAATG+TGG - chr7_3:57123412-57123431 None:intergenic 35.0%
CATTTAACTATCTGCTTCTG+TGG + chr7_3:57123412-57123431 Msa1111410:intron 35.0%
!! GTTTACCGATTTACCATTGT+AGG + chr7_3:57123434-57123453 Msa1111410:intron 35.0%
TACCATTGTAGGATGTTGTT+AGG + chr7_3:57123445-57123464 Msa1111410:intron 35.0%
ACCATTGTAGGATGTTGTTA+GGG + chr7_3:57123446-57123465 Msa1111410:intron 35.0%
GTGTAATCAATTCTAGGCTT+TGG - chr7_3:57123672-57123691 None:intergenic 35.0%
TCAATCATATCTGAAAGTCC+GGG - chr7_3:57123729-57123748 None:intergenic 35.0%
!! ATAGTGGGTAAAATACAGTG+TGG - chr7_3:57123818-57123837 None:intergenic 35.0%
CACAGTATCCTATGAAATAG+TGG - chr7_3:57123834-57123853 None:intergenic 35.0%
!! ATACATTTTGATCGGCATTC+AGG - chr7_3:57123975-57123994 None:intergenic 35.0%
AATGCCGATCAAAATGTATC+TGG + chr7_3:57123976-57123995 Msa1111410:intron 35.0%
ATGCCGATCAAAATGTATCT+GGG + chr7_3:57123977-57123996 Msa1111410:intron 35.0%
!! AACCCCAGATACATTTTGAT+CGG - chr7_3:57123983-57124002 None:intergenic 35.0%
!! TCTTCTGTCACTTTGAAAGA+AGG + chr7_3:57124104-57124123 Msa1111410:intron 35.0%
!! CTTCTGTCACTTTGAAAGAA+GGG + chr7_3:57124105-57124124 Msa1111410:intron 35.0%
! AGTCACTTTAAGTATTCCCT+GGG - chr7_3:57124233-57124252 None:intergenic 35.0%
GAATATGCACAACTACGTAA+GGG - chr7_3:57124306-57124325 None:intergenic 35.0%
! CTTGAATCCAATTTGGAATG+AGG + chr7_3:57124366-57124385 Msa1111410:CDS 35.0%
TCGAATTCCTCATTCCAAAT+TGG - chr7_3:57124376-57124395 None:intergenic 35.0%
! TCTTGTGCTAGTTTATCCTA+CGG + chr7_3:57124466-57124485 Msa1111410:intron 35.0%
CAAAATGTAAGTAATGCCGT+AGG - chr7_3:57124485-57124504 None:intergenic 35.0%
! CACGGCACATGTTAATATTT+TGG + chr7_3:57124856-57124875 Msa1111410:intron 35.0%
ATTGGGCAAGATAAACGATT+GGG + chr7_3:57124994-57125013 Msa1111410:CDS 35.0%
CTGAAAAGGAAATTGAACTG+AGG + chr7_3:57125055-57125074 Msa1111410:CDS 35.0%
GTAAAAGATAAGAAGGATCG+AGG + chr7_3:57125105-57125124 Msa1111410:CDS 35.0%
!! CTGTAGTTTGGGTTGTATAA+AGG - chr7_3:57125270-57125289 None:intergenic 35.0%
ACAAAGGAAGAAACTGAAAG+AGG + chr7_3:57125485-57125504 Msa1111410:CDS 35.0%
! AGGAGTTATTGGAAGTACAA+TGG + chr7_3:57125509-57125528 Msa1111410:CDS 35.0%
ATCTACTCCTGTCTTTAATG+TGG + chr7_3:57125785-57125804 Msa1111410:CDS 35.0%
TCTTTAATGTGGAGGAAAGT+GGG + chr7_3:57125796-57125815 Msa1111410:CDS 35.0%
CGTAGCTGTGATTGGAATTT+GGG + chr7_3:57118721-57118740 Msa1111410:five_prime_UTR 40.0%
! GGGAAAATGGGTTTGTTCTT+TGG + chr7_3:57118741-57118760 Msa1111410:exon 40.0%
!!! GTTCTTTGGGATTTTTCTGG+GGG + chr7_3:57118755-57118774 Msa1111410:CDS 40.0%
CGAGTCATCGTAATTTAGTG+TGG + chr7_3:57119017-57119036 Msa1111410:intron 40.0%
!! TGGTATTATGGTGGATTTGC+CGG - chr7_3:57119075-57119094 None:intergenic 40.0%
GCAGGTAGAATTGATGTTGT+AGG - chr7_3:57119300-57119319 None:intergenic 40.0%
! TGTTATTGGTTGTTTGGAGC+AGG - chr7_3:57119318-57119337 None:intergenic 40.0%
GAATCATATAGGGCTGTGAA+AGG + chr7_3:57119402-57119421 Msa1111410:intron 40.0%
ATCATATAGGGCTGTGAAAG+GGG + chr7_3:57119404-57119423 Msa1111410:intron 40.0%
!! GGGGGTGCTTTATCATTATA+GGG + chr7_3:57119424-57119443 Msa1111410:intron 40.0%
TCAATGTCCCTCTATATACG+GGG + chr7_3:57119451-57119470 Msa1111410:intron 40.0%
AAAGTTTCCAATACCAGGTC+AGG - chr7_3:57119482-57119501 None:intergenic 40.0%
! ACAGAAGGAACACCTTTTTG+AGG + chr7_3:57119532-57119551 Msa1111410:intron 40.0%
TGCAACAAGTTTGAGTGTAG+TGG - chr7_3:57119810-57119829 None:intergenic 40.0%
ACAGGGAAAGATATCCATTC+AGG - chr7_3:57120131-57120150 None:intergenic 40.0%
ATCTTTCCCTGTATATGAGC+AGG + chr7_3:57120139-57120158 Msa1111410:CDS 40.0%
GTACGACAACAACAGATGAT+AGG - chr7_3:57120169-57120188 None:intergenic 40.0%
AACGATCCTATCATAGGCAT+TGG + chr7_3:57120216-57120235 Msa1111410:intron 40.0%
! GTTTTGCCAATGCCTATGAT+AGG - chr7_3:57120225-57120244 None:intergenic 40.0%
CCTGAAAAAACCCATGAACA+AGG - chr7_3:57120378-57120397 None:intergenic 40.0%
!!! CCTTGTTCATGGGTTTTTTC+AGG + chr7_3:57120375-57120394 Msa1111410:intron 40.0%
! AATCTAGAGCAGTTTGTGTG+AGG + chr7_3:57120471-57120490 Msa1111410:intron 40.0%
ATTACGAATCCGGGATTTAG+TGG - chr7_3:57120657-57120676 None:intergenic 40.0%
TGGGCAATCAATTACGAATC+CGG - chr7_3:57120667-57120686 None:intergenic 40.0%
AATGGATCTACAATCCCTAC+GGG + chr7_3:57120863-57120882 Msa1111410:intron 40.0%
ATTGACCTGCTTAGTACATG+GGG - chr7_3:57120889-57120908 None:intergenic 40.0%
CATTGACCTGCTTAGTACAT+GGG - chr7_3:57120890-57120909 None:intergenic 40.0%
ACTTCGTTTATGCTGGGAAT+GGG - chr7_3:57120933-57120952 None:intergenic 40.0%
GTTTGTGACTTCGTTTATGC+TGG - chr7_3:57120940-57120959 None:intergenic 40.0%
TCACTGCATGTGCATCAAAA+GGG - chr7_3:57121027-57121046 None:intergenic 40.0%
ATCACTGCATGTGCATCAAA+AGG - chr7_3:57121028-57121047 None:intergenic 40.0%
TGATTGCGATTATGCTAAGG+AGG + chr7_3:57121088-57121107 Msa1111410:intron 40.0%
AGTGTGCATAAGACATCAGA+AGG + chr7_3:57121131-57121150 Msa1111410:intron 40.0%
! GAACCTTACCTTGATTTGAG+AGG + chr7_3:57121153-57121172 Msa1111410:intron 40.0%
! TTCCTAATCTTCCTTTGGGA+AGG + chr7_3:57121366-57121385 Msa1111410:intron 40.0%
! TCCTAATCTTCCTTTGGGAA+GGG + chr7_3:57121367-57121386 Msa1111410:intron 40.0%
AGTATGAATACCCTTCCCAA+AGG - chr7_3:57121380-57121399 None:intergenic 40.0%
!!! GCTTTTTTAGGCAGCAACTA+TGG + chr7_3:57121441-57121460 Msa1111410:intron 40.0%
! TTAGAAGAGTATAGACCTCC+TGG + chr7_3:57121490-57121509 Msa1111410:CDS 40.0%
TTCAACGAAGAAATTCCAGG+AGG - chr7_3:57121508-57121527 None:intergenic 40.0%
!!! TTTTGGAGCAACAGTTCCAA+GGG - chr7_3:57121545-57121564 None:intergenic 40.0%
!!! TTTTTGGAGCAACAGTTCCA+AGG - chr7_3:57121546-57121565 None:intergenic 40.0%
AGAAAGGAATCTGTGTGGAT+TGG - chr7_3:57121578-57121597 None:intergenic 40.0%
CAACACCATAATGTGCAAAC+AGG - chr7_3:57121612-57121631 None:intergenic 40.0%
GAATCCACCTAGTTGGAAAA+AGG + chr7_3:57121669-57121688 Msa1111410:intron 40.0%
ACCTAGTTGGAAAAAGGCTT+CGG + chr7_3:57121675-57121694 Msa1111410:intron 40.0%
AAAAAGGCTTCGGTTGTTGT+TGG + chr7_3:57121685-57121704 Msa1111410:intron 40.0%
CAGCATTCGTAAAATTCAGC+AGG - chr7_3:57121725-57121744 None:intergenic 40.0%
TTCACCGATGCAAGTTATCT+AGG + chr7_3:57121830-57121849 Msa1111410:intron 40.0%
ACATAACAAGGCCAAAGGTA+GGG - chr7_3:57122017-57122036 None:intergenic 40.0%
AACATAACAAGGCCAAAGGT+AGG - chr7_3:57122018-57122037 None:intergenic 40.0%
GTTATACTTGTGGCTTCTCA+TGG + chr7_3:57122035-57122054 Msa1111410:intron 40.0%
TATACTTGTGGCTTCTCATG+GGG + chr7_3:57122037-57122056 Msa1111410:intron 40.0%
TAAGAGGACATAACAGCTGA+TGG - chr7_3:57122366-57122385 None:intergenic 40.0%
TCAGCTGTTATGTCCTCTTA+TGG + chr7_3:57122366-57122385 Msa1111410:intron 40.0%
TGTTGCGTCAATTCCTATTC+AGG + chr7_3:57122912-57122931 Msa1111410:CDS 40.0%
CAGCTTAGTCTAACCTGAAT+AGG - chr7_3:57122928-57122947 None:intergenic 40.0%
! TTGTTTCTCGCTTCAGTTGA+AGG + chr7_3:57123002-57123021 Msa1111410:intron 40.0%
! CTGCGAGTTGGAATATAACA+CGG - chr7_3:57123050-57123069 None:intergenic 40.0%
ACAACAACAGCAGAAATGCA+GGG - chr7_3:57123081-57123100 None:intergenic 40.0%
AACAACAACAGCAGAAATGC+AGG - chr7_3:57123082-57123101 None:intergenic 40.0%
AAAGGTTACCTCAGCAAGTA+GGG - chr7_3:57123106-57123125 None:intergenic 40.0%
! ACAAACCATTTTGTGGGAAC+CGG + chr7_3:57123184-57123203 Msa1111410:intron 40.0%
TTGTTAGGGCCAACACTAAT+TGG + chr7_3:57123460-57123479 Msa1111410:intron 40.0%
TGTTAGGGCCAACACTAATT+GGG + chr7_3:57123461-57123480 Msa1111410:intron 40.0%
TTGTTACCGATATGCTCCAA+TGG + chr7_3:57123861-57123880 Msa1111410:CDS 40.0%
TGCCGATCAAAATGTATCTG+GGG + chr7_3:57123978-57123997 Msa1111410:intron 40.0%
! CTTTGTCTTTTGCAGTGATC+TGG + chr7_3:57124198-57124217 Msa1111410:intron 40.0%
! GTCACTTTAAGTATTCCCTG+GGG - chr7_3:57124232-57124251 None:intergenic 40.0%
! CAGTCACTTTAAGTATTCCC+TGG - chr7_3:57124234-57124253 None:intergenic 40.0%
CGAATATGCACAACTACGTA+AGG - chr7_3:57124307-57124326 None:intergenic 40.0%
CATTGGGCAAGATAAACGAT+TGG + chr7_3:57124993-57125012 Msa1111410:CDS 40.0%
TCTGCTTCCAGGTTAATAAG+TGG - chr7_3:57125033-57125052 None:intergenic 40.0%
TCGAGGAACCTTGAGAATAA+AGG + chr7_3:57125122-57125141 Msa1111410:CDS 40.0%
AGGAAGAAACTGAAAGAGGA+AGG + chr7_3:57125489-57125508 Msa1111410:CDS 40.0%
CTGAAAGAGGAAGGAGTTAT+TGG + chr7_3:57125498-57125517 Msa1111410:CDS 40.0%
TACTCCTGTCTTTAATGTGG+AGG + chr7_3:57125788-57125807 Msa1111410:CDS 40.0%
CTTTCCTCCACATTAAAGAC+AGG - chr7_3:57125795-57125814 None:intergenic 40.0%
GTCTTTAATGTGGAGGAAAG+TGG + chr7_3:57125795-57125814 Msa1111410:CDS 40.0%
CTTTAATGTGGAGGAAAGTG+GGG + chr7_3:57125797-57125816 Msa1111410:CDS 40.0%
TTTAATGTGGAGGAAAGTGG+GGG + chr7_3:57125798-57125817 Msa1111410:CDS 40.0%
CCACGAAGAAAAAATTACCG+TGG - chr7_3:57125834-57125853 None:intergenic 40.0%
!!! CCACGGTAATTTTTTCTTCG+TGG + chr7_3:57125831-57125850 Msa1111410:exon 40.0%
GAATTTGGCGTAGCTGTGAT+TGG + chr7_3:57118713-57118732 Msa1111410:five_prime_UTR 45.0%
GCGTAGCTGTGATTGGAATT+TGG + chr7_3:57118720-57118739 Msa1111410:five_prime_UTR 45.0%
! GTTATTCGGCGTAGCATTGA+TGG + chr7_3:57118779-57118798 Msa1111410:CDS 45.0%
AAGCCGCAAGAGAATTGCTA+AGG + chr7_3:57118830-57118849 Msa1111410:CDS 45.0%
GTGTGGCCTTTGTAGAATCA+TGG + chr7_3:57119034-57119053 Msa1111410:intron 45.0%
TGGCCTTTGTAGAATCATGG+TGG + chr7_3:57119037-57119056 Msa1111410:intron 45.0%
GAGCCACCATGATTCTACAA+AGG - chr7_3:57119043-57119062 None:intergenic 45.0%
TCATATAGGGCTGTGAAAGG+GGG + chr7_3:57119405-57119424 Msa1111410:intron 45.0%
!! GGGGGGTGCTTTATCATTAT+AGG + chr7_3:57119423-57119442 Msa1111410:intron 45.0%
GGTTTCACCCCGTATATAGA+GGG - chr7_3:57119461-57119480 None:intergenic 45.0%
AGGTTTCACCCCGTATATAG+AGG - chr7_3:57119462-57119481 None:intergenic 45.0%
GCAGTTGACGTTAAACTCCT+TGG + chr7_3:57120059-57120078 Msa1111410:CDS 45.0%
TTACTCACATCCGCCACAAA+TGG - chr7_3:57120436-57120455 None:intergenic 45.0%
ATGGGTAGACCACTAAATCC+CGG + chr7_3:57120645-57120664 Msa1111410:intron 45.0%
GGGCAATCAATTACGAATCC+GGG - chr7_3:57120666-57120685 None:intergenic 45.0%
CCATTGACCTGCTTAGTACA+TGG - chr7_3:57120891-57120910 None:intergenic 45.0%
CCATGTACTAAGCAGGTCAA+TGG + chr7_3:57120888-57120907 Msa1111410:intron 45.0%
GACTTCGTTTATGCTGGGAA+TGG - chr7_3:57120934-57120953 None:intergenic 45.0%
! CCTTACCTTGATTTGAGAGG+CGG + chr7_3:57121156-57121175 Msa1111410:intron 45.0%
ATTGCTTCCTTACGACCAAG+GGG - chr7_3:57121211-57121230 None:intergenic 45.0%
CATTGCTTCCTTACGACCAA+GGG - chr7_3:57121212-57121231 None:intergenic 45.0%
! CGCAGGAGTCTTTTCGTTTA+AGG - chr7_3:57121310-57121329 None:intergenic 45.0%
TCCAGGCGACCTTTAAACTT+TGG + chr7_3:57121337-57121356 Msa1111410:intron 45.0%
ACCCTTCCCAAAGGAAGATT+AGG - chr7_3:57121371-57121390 None:intergenic 45.0%
AAGTTCAGTAAGCTGTCCCT+TGG + chr7_3:57121526-57121545 Msa1111410:CDS 45.0%
! GAAGCCTTTTTCCAACTAGG+TGG - chr7_3:57121676-57121695 None:intergenic 45.0%
! ACCGAAGCCTTTTTCCAACT+AGG - chr7_3:57121679-57121698 None:intergenic 45.0%
CATAACAGCTGATGGTCAGA+AGG - chr7_3:57122358-57122377 None:intergenic 45.0%
GCTGTTATGTCCTCTTATGG+TGG + chr7_3:57122369-57122388 Msa1111410:intron 45.0%
!!! GACATTGATTTTCGTTGGGG+CGG + chr7_3:57122856-57122875 Msa1111410:CDS 45.0%
! CACGGATAATGGTGAAAACC+TGG - chr7_3:57123032-57123051 None:intergenic 45.0%
CAACAACAGCAGAAATGCAG+GGG - chr7_3:57123080-57123099 None:intergenic 45.0%
CAAAGGTTACCTCAGCAAGT+AGG - chr7_3:57123107-57123126 None:intergenic 45.0%
! ACTTGCTGAGGTAACCTTTG+AGG + chr7_3:57123107-57123126 Msa1111410:intron 45.0%
CTTGCTGAGGTAACCTTTGA+GGG + chr7_3:57123108-57123127 Msa1111410:intron 45.0%
! CAAACCATTTTGTGGGAACC+GGG + chr7_3:57123185-57123204 Msa1111410:intron 45.0%
TTATCCCGGTTCCCACAAAA+TGG - chr7_3:57123192-57123211 None:intergenic 45.0%
GCCCTAACAACATCCTACAA+TGG - chr7_3:57123450-57123469 None:intergenic 45.0%
! GATTACACTCTGAAGGCAGT+TGG + chr7_3:57123684-57123703 Msa1111410:CDS 45.0%
ATGAGGCCATTGGAGCATAT+CGG - chr7_3:57123870-57123889 None:intergenic 45.0%
ATATGCTCCAATGGCCTCAT+CGG + chr7_3:57123870-57123889 Msa1111410:CDS 45.0%
AGTGGAACAACAATCCGATG+AGG - chr7_3:57123887-57123906 None:intergenic 45.0%
! CATCGGATTGTTGTTCCACT+TGG + chr7_3:57123887-57123906 Msa1111410:CDS 45.0%
TCACACTACCTAGTATCCAC+AGG - chr7_3:57123920-57123939 None:intergenic 45.0%
CGACTTGATTGCAGAAGACA+AGG + chr7_3:57124393-57124412 Msa1111410:CDS 45.0%
GGAGAAGATAAGCGCTTCTT+TGG - chr7_3:57124809-57124828 None:intergenic 45.0%
! CCTTTTCAGTTTCTGCTTCC+AGG - chr7_3:57125044-57125063 None:intergenic 45.0%
CCTGGAAGCAGAAACTGAAA+AGG + chr7_3:57125041-57125060 Msa1111410:CDS 45.0%
!! GGACTAGTTGGAACTGGAAT+CGG + chr7_3:57125573-57125592 Msa1111410:CDS 45.0%
AGCAAGGCAGGAAAGTTCAT+GGG + chr7_3:57125714-57125733 Msa1111410:CDS 45.0%
!! CGTAGCATTGATGGCTGGAT+GGG + chr7_3:57118788-57118807 Msa1111410:CDS 50.0%
ATGGTGGCTCACTGTGATTC+CGG + chr7_3:57119053-57119072 Msa1111410:intron 50.0%
CATATAGGGCTGTGAAAGGG+GGG + chr7_3:57119406-57119425 Msa1111410:intron 50.0%
GGTGAAACCTGACCTGGTAT+TGG + chr7_3:57119472-57119491 Msa1111410:intron 50.0%
CGTCTCTATTCAGGGATCCA+AGG - chr7_3:57120079-57120098 None:intergenic 50.0%
GGCACACCTGCTCATATACA+GGG - chr7_3:57120148-57120167 None:intergenic 50.0%
AGGCACACCTGCTCATATAC+AGG - chr7_3:57120149-57120168 None:intergenic 50.0%
ACAAGCAGCTGTCCAAGTTG+TGG + chr7_3:57120410-57120429 Msa1111410:CDS 50.0%
GTCCAAGTTGTGGCCATTTG+TGG + chr7_3:57120420-57120439 Msa1111410:CDS 50.0%
CAAGTTGTGGCCATTTGTGG+CGG + chr7_3:57120423-57120442 Msa1111410:CDS 50.0%
CCGCCTCTCAAATCAAGGTA+AGG - chr7_3:57121159-57121178 None:intergenic 50.0%
AGAAGCCGCCTCTCAAATCA+AGG - chr7_3:57121164-57121183 None:intergenic 50.0%
AACTAGAACTCGTGACCCCT+TGG + chr7_3:57121193-57121212 Msa1111410:intron 50.0%
GCATTGCTTCCTTACGACCA+AGG - chr7_3:57121213-57121232 None:intergenic 50.0%
GCCAAAGTTTAAAGGTCGCC+TGG - chr7_3:57121341-57121360 None:intergenic 50.0%
CTCTCGATGGTTGCTTGAAG+TGG + chr7_3:57122061-57122080 Msa1111410:intron 50.0%
TCTGAACACGAATGCCTGCA+TGG - chr7_3:57122810-57122829 None:intergenic 50.0%
GCTTCAGTTGAAGGATCTCC+AGG + chr7_3:57123011-57123030 Msa1111410:intron 50.0%
! TGTTGTTGCCCTACTTGCTG+AGG + chr7_3:57123095-57123114 Msa1111410:CDS 50.0%
! CTGAGGTAACCTTTGAGGGT+GGG + chr7_3:57123112-57123131 Msa1111410:intron 50.0%
! TGAGGTAACCTTTGAGGGTG+GGG + chr7_3:57123113-57123132 Msa1111410:intron 50.0%
! GGGCATTGCCCAATTAGTGT+TGG - chr7_3:57123472-57123491 None:intergenic 50.0%
! TACACTCTGAAGGCAGTTGG+CGG + chr7_3:57123687-57123706 Msa1111410:CDS 50.0%
CAACAATCCGATGAGGCCAT+TGG - chr7_3:57123880-57123899 None:intergenic 50.0%
! CGGATTGTTGTTCCACTTGG+TGG + chr7_3:57123890-57123909 Msa1111410:CDS 50.0%
GTGGTACTCCTGTGGATACT+AGG + chr7_3:57123909-57123928 Msa1111410:CDS 50.0%
! TGATCTGGAGCTTAAACCCC+AGG + chr7_3:57124213-57124232 Msa1111410:CDS 50.0%
! GATCTGGAGCTTAAACCCCA+GGG + chr7_3:57124214-57124233 Msa1111410:CDS 50.0%
AACCTCGACAGTGAGTGACT+GGG - chr7_3:57124422-57124441 None:intergenic 50.0%
AAACCTCGACAGTGAGTGAC+TGG - chr7_3:57124423-57124442 None:intergenic 50.0%
AGTACAATGGACGCGCTAGA+CGG + chr7_3:57125522-57125541 Msa1111410:CDS 50.0%
! GCAGCATCAGTAGTTGGTTC+TGG + chr7_3:57125546-57125565 Msa1111410:CDS 50.0%
!! TCAGTAGTTGGTTCTGGTGC+TGG + chr7_3:57125552-57125571 Msa1111410:CDS 50.0%
! GGAATGGTGGGAAGTGGAAT+TGG + chr7_3:57125606-57125625 Msa1111410:CDS 50.0%
!! AATTGGTGCTGGAGCTGGAA+TGG + chr7_3:57125623-57125642 Msa1111410:CDS 50.0%
! GGAATGGTGGGAAGTGGATT+CGG + chr7_3:57125639-57125658 Msa1111410:CDS 50.0%
GAGCTGGAATTGTTGGCAGT+GGG + chr7_3:57125667-57125686 Msa1111410:CDS 50.0%
GAGCAAGGCAGGAAAGTTCA+TGG + chr7_3:57125713-57125732 Msa1111410:CDS 50.0%
TTCATGGGCAGGACAATCAC+AGG + chr7_3:57125729-57125748 Msa1111410:CDS 50.0%
TCATGGGCAGGACAATCACA+GGG + chr7_3:57125730-57125749 Msa1111410:CDS 50.0%
CAGGGCAAACTGTATCGAGA+AGG + chr7_3:57125748-57125767 Msa1111410:CDS 50.0%
!! TTCGGCGTAGCATTGATGGC+TGG + chr7_3:57118783-57118802 Msa1111410:CDS 55.0%
!! GCGTAGCATTGATGGCTGGA+TGG + chr7_3:57118787-57118806 Msa1111410:CDS 55.0%
ATACGGGGTGAAACCTGACC+TGG + chr7_3:57119466-57119485 Msa1111410:intron 55.0%
TGGTAGGCTTGTGTGAGCTG+TGG + chr7_3:57119948-57119967 Msa1111410:intron 55.0%
CGCCACAAATGGCCACAACT+TGG - chr7_3:57120425-57120444 None:intergenic 55.0%
CTTAGTACATGGGGCCCGTA+GGG - chr7_3:57120880-57120899 None:intergenic 55.0%
CTTCTCATGGGGACTCTCGA+TGG + chr7_3:57122048-57122067 Msa1111410:intron 55.0%
AGGGGATCTCTTCTGCGAGT+TGG - chr7_3:57123062-57123081 None:intergenic 55.0%
! GCTGAGGTAACCTTTGAGGG+TGG + chr7_3:57123111-57123130 Msa1111410:intron 55.0%
! GAGGTAACCTTTGAGGGTGG+GGG + chr7_3:57123114-57123133 Msa1111410:intron 55.0%
! AGGTAACCTTTGAGGGTGGG+GGG + chr7_3:57123115-57123134 Msa1111410:intron 55.0%
GGCAGTTGGCGGAAGTTTGA+CGG + chr7_3:57123698-57123717 Msa1111410:CDS 55.0%
GGAAGTTTGACGGCACTTCC+CGG + chr7_3:57123708-57123727 Msa1111410:CDS 55.0%
! TCCACTTGGTGGTACTCCTG+TGG + chr7_3:57123901-57123920 Msa1111410:CDS 55.0%
!! TCCACAGGAGTACCACCAAG+TGG - chr7_3:57123905-57123924 None:intergenic 55.0%
GGAAGAACAGATGGCTGCAC+TGG + chr7_3:57125440-57125459 Msa1111410:CDS 55.0%
GACGGAGCAGCATCAGTAGT+TGG + chr7_3:57125540-57125559 Msa1111410:CDS 55.0%
!! GGTTCTGGTGCTGGACTAGT+TGG + chr7_3:57125561-57125580 Msa1111410:CDS 55.0%
!! GGTGCTGGACTAGTTGGAAC+TGG + chr7_3:57125567-57125586 Msa1111410:CDS 55.0%
GTGGGAAGTGGAATTGGTGC+TGG + chr7_3:57125612-57125631 Msa1111410:CDS 55.0%
!! AGTGGAATTGGTGCTGGAGC+TGG + chr7_3:57125618-57125637 Msa1111410:CDS 55.0%
! GGTGCTGGAGCTGGAATTGT+TGG + chr7_3:57125660-57125679 Msa1111410:CDS 55.0%
GGAGCTGGAATTGTTGGCAG+TGG + chr7_3:57125666-57125685 Msa1111410:CDS 55.0%
! GGAATTGTTGGCAGTGGGCT+TGG + chr7_3:57125672-57125691 Msa1111410:CDS 55.0%
CTTGCTCAGTCCACTGCCAA+CGG - chr7_3:57125700-57125719 None:intergenic 55.0%
AGGCAGGAAAGTTCATGGGC+AGG + chr7_3:57125718-57125737 Msa1111410:CDS 55.0%
!! GTATCGAGAAGGAGTGCCAG+CGG + chr7_3:57125759-57125778 Msa1111410:CDS 55.0%
GACAGGAGTAGATGAACCGC+TGG - chr7_3:57125778-57125797 None:intergenic 55.0%
AATGTGGAGGAAAGTGGGGG+TGG + chr7_3:57125801-57125820 Msa1111410:CDS 55.0%
GCTTAGTACATGGGGCCCGT+AGG - chr7_3:57120881-57120900 None:intergenic 60.0%
ACGGGCCCCATGTACTAAGC+AGG + chr7_3:57120881-57120900 Msa1111410:intron 60.0%
CTCGTGACCCCTTGGTCGTA+AGG + chr7_3:57121201-57121220 Msa1111410:intron 60.0%
GATCAACCCCCCACCCTCAA+AGG - chr7_3:57123124-57123143 None:intergenic 60.0%
GACCCAGTCACTCACTGTCG+AGG + chr7_3:57124417-57124436 Msa1111410:CDS 60.0%
GTTGGAACTGGAATCGGCGC+TGG + chr7_3:57125579-57125598 Msa1111410:CDS 60.0%
! AATCGGCGCTGGAGCTGGAA+TGG + chr7_3:57125590-57125609 Msa1111410:CDS 60.0%
! GGAGCTGGAATGGTGGGAAG+TGG + chr7_3:57125600-57125619 Msa1111410:CDS 60.0%
! TGGTGCTGGAGCTGGAATGG+TGG + chr7_3:57125626-57125645 Msa1111410:CDS 60.0%
! GGTGCTGGAGCTGGAATGGT+GGG + chr7_3:57125627-57125646 Msa1111410:CDS 60.0%
! GGAGCTGGAATGGTGGGAAG+TGG + chr7_3:57125600-57125619 Msa1111410:CDS 60.0%
!! GTGGGAAGTGGATTCGGTGC+TGG + chr7_3:57125645-57125664 Msa1111410:CDS 60.0%
!! AGTGGATTCGGTGCTGGAGC+TGG + chr7_3:57125651-57125670 Msa1111410:CDS 60.0%
!! CGTTGGCAGTGGACTGAGCA+AGG + chr7_3:57125698-57125717 Msa1111410:CDS 60.0%
GACTCCTGCGCTCAAGCTCC+AGG + chr7_3:57121320-57121339 Msa1111410:intron 65.0%
! ACTGGAATCGGCGCTGGAGC+TGG + chr7_3:57125585-57125604 Msa1111410:CDS 65.0%
! GGCGCTGGAGCTGGAATGGT+GGG + chr7_3:57125594-57125613 Msa1111410:CDS 65.0%
!! GGCAGTGGACTGAGCAAGGC+AGG + chr7_3:57125702-57125721 Msa1111410:CDS 65.0%
GTCGCCTGGAGCTTGAGCGC+AGG - chr7_3:57121327-57121346 None:intergenic 70.0%
! CGGCGCTGGAGCTGGAATGG+TGG + chr7_3:57125593-57125612 Msa1111410:CDS 70.0%
!! GGCAGTGGGCTTGGTGCCGT+TGG + chr7_3:57125681-57125700 Msa1111410:CDS 70.0%
!! GGGCTTGGTGCCGTTGGCAG+TGG + chr7_3:57125687-57125706 Msa1111410:CDS 70.0%
GTGGGGGTGGCGCAAAGCCA+CGG + chr7_3:57125814-57125833 Msa1111410:CDS 70.0%
AACACACACGCGCGCGCGCG+AGG - chr7_3:57121641-57121660 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 57118606 57126017 57118606 ID=Msa1111410;Name=Msa1111410
chr7_3 mRNA 57118606 57126017 57118606 ID=Msa1111410-mRNA-1;Parent=Msa1111410;Name=Msa1111410-mRNA-1;_AED=0.05;_eAED=0.05;_QI=141|1|1|1|1|1|11|178|525
chr7_3 exon 57118606 57118851 57118606 ID=Msa1111410-mRNA-1:exon:12186;Parent=Msa1111410-mRNA-1
chr7_3 exon 57120059 57120160 57120059 ID=Msa1111410-mRNA-1:exon:12187;Parent=Msa1111410-mRNA-1
chr7_3 exon 57120397 57120447 57120397 ID=Msa1111410-mRNA-1:exon:12188;Parent=Msa1111410-mRNA-1
chr7_3 exon 57121451 57121571 57121451 ID=Msa1111410-mRNA-1:exon:12189;Parent=Msa1111410-mRNA-1
chr7_3 exon 57122815 57122933 57122815 ID=Msa1111410-mRNA-1:exon:12190;Parent=Msa1111410-mRNA-1
chr7_3 exon 57123018 57123116 57123018 ID=Msa1111410-mRNA-1:exon:12191;Parent=Msa1111410-mRNA-1
chr7_3 exon 57123669 57123749 57123669 ID=Msa1111410-mRNA-1:exon:12192;Parent=Msa1111410-mRNA-1
chr7_3 exon 57123845 57123930 57123845 ID=Msa1111410-mRNA-1:exon:12193;Parent=Msa1111410-mRNA-1
chr7_3 exon 57124213 57124438 57124213 ID=Msa1111410-mRNA-1:exon:12194;Parent=Msa1111410-mRNA-1
chr7_3 exon 57124979 57125143 57124979 ID=Msa1111410-mRNA-1:exon:12195;Parent=Msa1111410-mRNA-1
chr7_3 exon 57125417 57126017 57125417 ID=Msa1111410-mRNA-1:exon:12196;Parent=Msa1111410-mRNA-1
chr7_3 five_prime_UTR 57118606 57118746 57118606 ID=Msa1111410-mRNA-1:five_prime_utr;Parent=Msa1111410-mRNA-1
chr7_3 CDS 57118747 57118851 57118747 ID=Msa1111410-mRNA-1:cds;Parent=Msa1111410-mRNA-1
chr7_3 CDS 57120059 57120160 57120059 ID=Msa1111410-mRNA-1:cds;Parent=Msa1111410-mRNA-1
chr7_3 CDS 57120397 57120447 57120397 ID=Msa1111410-mRNA-1:cds;Parent=Msa1111410-mRNA-1
chr7_3 CDS 57121451 57121571 57121451 ID=Msa1111410-mRNA-1:cds;Parent=Msa1111410-mRNA-1
chr7_3 CDS 57122815 57122933 57122815 ID=Msa1111410-mRNA-1:cds;Parent=Msa1111410-mRNA-1
chr7_3 CDS 57123018 57123116 57123018 ID=Msa1111410-mRNA-1:cds;Parent=Msa1111410-mRNA-1
chr7_3 CDS 57123669 57123749 57123669 ID=Msa1111410-mRNA-1:cds;Parent=Msa1111410-mRNA-1
chr7_3 CDS 57123845 57123930 57123845 ID=Msa1111410-mRNA-1:cds;Parent=Msa1111410-mRNA-1
chr7_3 CDS 57124213 57124438 57124213 ID=Msa1111410-mRNA-1:cds;Parent=Msa1111410-mRNA-1
chr7_3 CDS 57124979 57125143 57124979 ID=Msa1111410-mRNA-1:cds;Parent=Msa1111410-mRNA-1
chr7_3 CDS 57125417 57125839 57125417 ID=Msa1111410-mRNA-1:cds;Parent=Msa1111410-mRNA-1
chr7_3 three_prime_UTR 57125840 57126017 57125840 ID=Msa1111410-mRNA-1:three_prime_utr;Parent=Msa1111410-mRNA-1
Gene Sequence

>Msa1111410

ATGGGTTTGTTCTTTGGGATTTTTCTGGGGGTGTTATTCGGCGTAGCATTGATGGCTGGATGGGAGAGAATGATGAGATACAGAAGCCGCAAGAGAATTGCTAAGGCAGTTGACGTTAAACTCCTTGGATCCCTGAATAGAGACGACTTAAAGAAAATTTGTGGTGAAAATTTACCTGAATGGATATCTTTCCCTGTATATGAGCAGGTGAAATGGCTAAACAAGCAGCTGTCCAAGTTGTGGCCATTTGTGGCGGATGCAGCAACTATGGTGATAAGAGAATCTGTTGAACCGCTATTAGAAGAGTATAGACCTCCTGGAATTTCTTCGTTGAAGTTCAGTAAGCTGTCCCTTGGAACTGTTGCTCCAAAAATTGAAGGCATTCGTGTTCAGAGTCTTAAAAAAGGTCAAATCATAATGGACATTGATTTTCGTTGGGGCGGTGATCCTAATATTGTTTTGGGTGTTGAAGCACTTGTTGCGTCAATTCCTATTCAGTTGAAGGATCTCCAGGTTTTCACCATTATCCGTGTTATATTCCAACTCGCAGAAGAGATCCCCTGCATTTCTGCTGTTGTTGTTGCCCTACTTGCTGAGCCAAAGCCTAGAATTGATTACACTCTGAAGGCAGTTGGCGGAAGTTTGACGGCACTTCCCGGACTTTCAGATATGATTGATGATACTGTGAACTCAATTGTTACCGATATGCTCCAATGGCCTCATCGGATTGTTGTTCCACTTGGTGGTACTCCTGTGGATACTAGTGATCTGGAGCTTAAACCCCAGGGAATACTTAAAGTGACTGTAATGAAAGCAAATGATCTAAAGAATATGGAAATGATTGGGAAGTCTGACCCTTACGTAGTTGTGCATATTCGACCACTCTTTAAAGTCAAAACAAAGGTTATTGATAACAACTTGAATCCAATTTGGAATGAGGAATTCGACTTGATTGCAGAAGACAAGGAGACCCAGTCACTCACTGTCGAGGTTTTTGATAAAGACATTGGGCAAGATAAACGATTGGGAGTAGCAAAATTGCCACTTATTAACCTGGAAGCAGAAACTGAAAAGGAAATTGAACTGAGGCTTCTGTCATCGCTTGATACATTGAAAGTAAAAGATAAGAAGGATCGAGGAACCTTGAGAATAAAGTATTTCTATCATGAATTTAACAAGGAAGAACAGATGGCTGCACTGGAAGCAGAGAAAATGACACTAGAACAAAGGAAGAAACTGAAAGAGGAAGGAGTTATTGGAAGTACAATGGACGCGCTAGACGGAGCAGCATCAGTAGTTGGTTCTGGTGCTGGACTAGTTGGAACTGGAATCGGCGCTGGAGCTGGAATGGTGGGAAGTGGAATTGGTGCTGGAGCTGGAATGGTGGGAAGTGGATTCGGTGCTGGAGCTGGAATTGTTGGCAGTGGGCTTGGTGCCGTTGGCAGTGGACTGAGCAAGGCAGGAAAGTTCATGGGCAGGACAATCACAGGGCAAACTGTATCGAGAAGGAGTGCCAGCGGTTCATCTACTCCTGTCTTTAATGTGGAGGAAAGTGGGGGTGGCGCAAAGCCACGGTAA

Protein sequence

>Msa1111410

MGLFFGIFLGVLFGVALMAGWERMMRYRSRKRIAKAVDVKLLGSLNRDDLKKICGENLPEWISFPVYEQVKWLNKQLSKLWPFVADAATMVIRESVEPLLEEYRPPGISSLKFSKLSLGTVAPKIEGIRVQSLKKGQIIMDIDFRWGGDPNIVLGVEALVASIPIQLKDLQVFTIIRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGLSDMIDDTVNSIVTDMLQWPHRIVVPLGGTPVDTSDLELKPQGILKVTVMKANDLKNMEMIGKSDPYVVVHIRPLFKVKTKVIDNNLNPIWNEEFDLIAEDKETQSLTVEVFDKDIGQDKRLGVAKLPLINLEAETEKEIELRLLSSLDTLKVKDKKDRGTLRIKYFYHEFNKEEQMAALEAEKMTLEQRKKLKEEGVIGSTMDALDGAASVVGSGAGLVGTGIGAGAGMVGSGIGAGAGMVGSGFGAGAGIVGSGLGAVGSGLSKAGKFMGRTITGQTVSRRSASGSSTPVFNVEESGGGAKPR*