Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1115170 | XP_006594031.1 | 76.955 | 243 | 24 | 2 | 1 | 211 | 1 | 243 | 2.00e-125 | 375 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1115170 | sp|Q54Y26|NDRA_DICDI | 57.764 | 161 | 68 | 0 | 51 | 211 | 74 | 234 | 1.05e-60 | 201 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1115170 | A0A072U4A3 | 86.364 | 242 | 2 | 1 | 1 | 211 | 1 | 242 | 1.63e-143 | 420 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1036890 | Msa1115170 | 0.825906 | 3.629603e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1115170 | MtrunA17_Chr7g0261491 | 86.364 | 242 | 2 | 1 | 1 | 211 | 1 | 242 | 1.22e-146 | 420 |
Msa1115170 | MtrunA17_Chr1g0183651 | 74.380 | 242 | 31 | 1 | 1 | 211 | 1 | 242 | 2.57e-122 | 357 |
Msa1115170 | MtrunA17_Chr1g0187581 | 65.289 | 242 | 50 | 3 | 1 | 211 | 1 | 239 | 2.22e-103 | 308 |
Msa1115170 | MtrunA17_Chr1g0167351 | 64.463 | 242 | 45 | 2 | 1 | 211 | 1 | 232 | 2.34e-98 | 295 |
Msa1115170 | MtrunA17_Chr1g0167311 | 81.595 | 163 | 30 | 0 | 49 | 211 | 75 | 237 | 6.17e-93 | 281 |
Msa1115170 | MtrunA17_Chr3g0135951 | 75.460 | 163 | 40 | 0 | 49 | 211 | 54 | 216 | 1.36e-84 | 259 |
Msa1115170 | MtrunA17_Chr2g0299781 | 74.233 | 163 | 42 | 0 | 49 | 211 | 73 | 235 | 2.11e-83 | 256 |
Msa1115170 | MtrunA17_Chr1g0153321 | 68.098 | 163 | 52 | 0 | 49 | 211 | 68 | 230 | 1.44e-78 | 244 |
Msa1115170 | MtrunA17_Chr6g0478601 | 40.000 | 140 | 84 | 0 | 74 | 213 | 96 | 235 | 3.87e-30 | 116 |
Msa1115170 | MtrunA17_Chr4g0018201 | 42.222 | 135 | 78 | 0 | 79 | 213 | 749 | 883 | 8.44e-30 | 116 |
Msa1115170 | MtrunA17_Chr5g0428981 | 41.481 | 135 | 79 | 0 | 79 | 213 | 753 | 887 | 1.49e-29 | 115 |
Msa1115170 | MtrunA17_Chr4g0059751 | 36.429 | 140 | 82 | 1 | 81 | 213 | 81 | 220 | 1.62e-27 | 108 |
Msa1115170 | MtrunA17_Chr7g0245031 | 33.125 | 160 | 103 | 2 | 56 | 213 | 115 | 272 | 1.97e-25 | 102 |
Msa1115170 | MtrunA17_Chr1g0197721 | 37.037 | 135 | 85 | 0 | 77 | 211 | 39 | 173 | 1.51e-23 | 97.4 |
Msa1115170 | MtrunA17_Chr4g0030361 | 36.090 | 133 | 83 | 1 | 83 | 213 | 303 | 435 | 1.99e-20 | 89.0 |
Msa1115170 | MtrunA17_Chr8g0369091 | 36.842 | 133 | 82 | 1 | 83 | 213 | 593 | 725 | 4.13e-20 | 88.2 |
Msa1115170 | MtrunA17_Chr8g0335351 | 33.094 | 139 | 91 | 1 | 77 | 213 | 360 | 498 | 9.11e-19 | 84.3 |
Msa1115170 | MtrunA17_Chr2g0309421 | 32.374 | 139 | 92 | 1 | 77 | 213 | 165 | 303 | 1.20e-18 | 83.6 |
Msa1115170 | MtrunA17_Chr7g0227331 | 31.206 | 141 | 95 | 1 | 75 | 213 | 220 | 360 | 2.09e-18 | 83.2 |
Msa1115170 | MtrunA17_Chr2g0327561 | 33.835 | 133 | 86 | 1 | 83 | 213 | 622 | 754 | 2.27e-18 | 83.2 |
Msa1115170 | MtrunA17_Chr3g0140631 | 36.220 | 127 | 79 | 2 | 86 | 211 | 34 | 159 | 5.82e-18 | 80.5 |
Msa1115170 | MtrunA17_Chr7g0250631 | 32.374 | 139 | 92 | 1 | 77 | 213 | 354 | 492 | 1.00e-17 | 81.3 |
Msa1115170 | MtrunA17_Chr2g0290691 | 26.570 | 207 | 137 | 4 | 19 | 213 | 129 | 332 | 1.97e-16 | 77.4 |
Msa1115170 | MtrunA17_Chr1g0179101 | 29.710 | 138 | 95 | 1 | 78 | 213 | 461 | 598 | 8.96e-16 | 75.5 |
Msa1115170 | MtrunA17_Chr7g0266031 | 30.714 | 140 | 95 | 1 | 76 | 213 | 481 | 620 | 9.52e-16 | 75.5 |
Msa1115170 | MtrunA17_Chr8g0351491 | 30.769 | 130 | 90 | 0 | 82 | 211 | 9 | 138 | 1.03e-15 | 73.9 |
Msa1115170 | MtrunA17_Chr8g0356291 | 31.496 | 127 | 85 | 1 | 89 | 213 | 129 | 255 | 2.12e-15 | 74.3 |
Msa1115170 | MtrunA17_Chr4g0063311 | 27.465 | 142 | 96 | 2 | 77 | 211 | 81 | 222 | 2.14e-15 | 74.3 |
Msa1115170 | MtrunA17_Chr3g0080101 | 28.676 | 136 | 95 | 1 | 80 | 213 | 408 | 543 | 8.49e-14 | 69.7 |
Msa1115170 | MtrunA17_Chr2g0285711 | 27.027 | 148 | 96 | 2 | 76 | 211 | 66 | 213 | 1.30e-13 | 68.9 |
Msa1115170 | MtrunA17_Chr5g0405421 | 31.746 | 126 | 83 | 3 | 89 | 211 | 99 | 224 | 6.88e-13 | 67.0 |
Msa1115170 | MtrunA17_Chr8g0353621 | 29.134 | 127 | 90 | 0 | 85 | 211 | 6 | 132 | 1.03e-12 | 65.5 |
Msa1115170 | MtrunA17_Chr8g0379091 | 28.302 | 159 | 103 | 3 | 55 | 213 | 2 | 149 | 1.63e-12 | 65.9 |
Msa1115170 | MtrunA17_Chr4g0063881 | 27.407 | 135 | 96 | 1 | 77 | 211 | 1 | 133 | 2.50e-12 | 65.1 |
Msa1115170 | MtrunA17_Chr6g0468751 | 27.778 | 126 | 91 | 0 | 86 | 211 | 16 | 141 | 3.29e-12 | 64.7 |
Msa1115170 | MtrunA17_Chr2g0284031 | 30.769 | 143 | 91 | 2 | 71 | 213 | 20 | 154 | 3.37e-12 | 64.7 |
Msa1115170 | MtrunA17_Chr6g0453681 | 27.778 | 126 | 91 | 0 | 86 | 211 | 16 | 141 | 3.83e-12 | 64.7 |
Msa1115170 | MtrunA17_Chr5g0441691 | 29.365 | 126 | 88 | 1 | 89 | 213 | 68 | 193 | 7.62e-12 | 63.9 |
Msa1115170 | MtrunA17_Chr2g0312641 | 25.954 | 131 | 95 | 1 | 83 | 211 | 90 | 220 | 8.16e-12 | 63.5 |
Msa1115170 | MtrunA17_Chr1g0173541 | 27.059 | 170 | 113 | 3 | 48 | 213 | 15 | 177 | 2.04e-11 | 62.4 |
Msa1115170 | MtrunA17_Chr3g0107011 | 26.984 | 126 | 91 | 1 | 86 | 211 | 11 | 135 | 2.20e-11 | 62.4 |
Msa1115170 | MtrunA17_Chr7g0267751 | 28.333 | 120 | 85 | 1 | 95 | 213 | 141 | 260 | 2.45e-11 | 62.4 |
Msa1115170 | MtrunA17_Chr1g0157131 | 28.571 | 126 | 89 | 1 | 89 | 213 | 74 | 199 | 3.29e-11 | 62.0 |
Msa1115170 | MtrunA17_Chr8g0381091 | 26.389 | 144 | 94 | 2 | 80 | 211 | 66 | 209 | 3.42e-11 | 62.0 |
Msa1115170 | MtrunA17_Chr1g0203881 | 25.833 | 120 | 88 | 1 | 95 | 213 | 47 | 166 | 4.97e-11 | 61.2 |
Msa1115170 | MtrunA17_Chr5g0419441 | 25.000 | 216 | 142 | 5 | 8 | 211 | 153 | 360 | 5.50e-11 | 61.6 |
Msa1115170 | MtrunA17_Chr0c02g0489761 | 28.333 | 120 | 85 | 1 | 95 | 213 | 84 | 203 | 7.10e-11 | 60.8 |
Msa1115170 | MtrunA17_Chr7g0267771 | 28.125 | 128 | 85 | 2 | 87 | 210 | 86 | 210 | 8.65e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1115170 | AT1G03920.1 | 64.639 | 263 | 37 | 4 | 1 | 211 | 1 | 259 | 7.01e-107 | 318 |
Msa1115170 | AT1G03920.3 | 64.639 | 263 | 37 | 4 | 1 | 211 | 1 | 259 | 7.01e-107 | 318 |
Msa1115170 | AT2G20470.3 | 66.400 | 250 | 41 | 3 | 1 | 211 | 1 | 246 | 3.68e-105 | 313 |
Msa1115170 | AT2G20470.2 | 66.400 | 250 | 41 | 3 | 1 | 211 | 1 | 246 | 1.43e-104 | 313 |
Msa1115170 | AT2G20470.1 | 66.400 | 250 | 41 | 3 | 1 | 211 | 1 | 246 | 1.43e-104 | 313 |
Msa1115170 | AT3G23310.1 | 66.942 | 242 | 49 | 1 | 1 | 211 | 1 | 242 | 1.21e-101 | 305 |
Msa1115170 | AT4G14350.2 | 88.957 | 163 | 18 | 0 | 49 | 211 | 79 | 241 | 6.63e-101 | 303 |
Msa1115170 | AT4G14350.1 | 88.957 | 163 | 18 | 0 | 49 | 211 | 79 | 241 | 6.63e-101 | 303 |
Msa1115170 | AT4G14350.4 | 88.957 | 163 | 18 | 0 | 49 | 211 | 79 | 241 | 6.63e-101 | 303 |
Msa1115170 | AT4G14350.3 | 88.957 | 163 | 18 | 0 | 49 | 211 | 79 | 241 | 7.92e-101 | 302 |
Msa1115170 | AT1G03920.2 | 86.986 | 146 | 19 | 0 | 66 | 211 | 1 | 146 | 1.59e-89 | 271 |
Msa1115170 | AT1G30640.2 | 58.506 | 241 | 67 | 2 | 2 | 211 | 4 | 242 | 1.87e-88 | 271 |
Msa1115170 | AT1G30640.1 | 58.506 | 241 | 67 | 2 | 2 | 211 | 4 | 242 | 1.87e-88 | 271 |
Msa1115170 | AT1G30640.3 | 79.730 | 148 | 30 | 0 | 64 | 211 | 2 | 149 | 7.72e-82 | 251 |
Msa1115170 | AT4G33080.2 | 71.779 | 163 | 46 | 0 | 49 | 211 | 54 | 216 | 1.62e-80 | 249 |
Msa1115170 | AT4G33080.1 | 71.779 | 163 | 46 | 0 | 49 | 211 | 54 | 216 | 1.90e-80 | 249 |
Msa1115170 | AT5G09890.2 | 69.325 | 163 | 50 | 0 | 49 | 211 | 62 | 224 | 5.03e-79 | 245 |
Msa1115170 | AT5G09890.1 | 69.325 | 163 | 50 | 0 | 49 | 211 | 62 | 224 | 5.35e-79 | 245 |
Msa1115170 | AT2G19400.1 | 71.779 | 163 | 46 | 0 | 49 | 211 | 65 | 227 | 7.17e-79 | 245 |
Msa1115170 | AT5G62310.1 | 38.798 | 183 | 93 | 2 | 31 | 213 | 715 | 878 | 4.38e-31 | 120 |
Msa1115170 | AT3G17850.1 | 41.353 | 133 | 78 | 0 | 81 | 213 | 874 | 1006 | 1.95e-29 | 115 |
Msa1115170 | AT1G48490.3 | 33.333 | 180 | 113 | 1 | 41 | 213 | 773 | 952 | 4.06e-29 | 114 |
Msa1115170 | AT1G48490.2 | 33.333 | 180 | 113 | 1 | 41 | 213 | 773 | 952 | 4.06e-29 | 114 |
Msa1115170 | AT1G48490.1 | 33.333 | 180 | 113 | 1 | 41 | 213 | 773 | 952 | 4.06e-29 | 114 |
Msa1115170 | AT1G48490.4 | 33.333 | 180 | 113 | 1 | 41 | 213 | 774 | 953 | 4.06e-29 | 114 |
Msa1115170 | AT1G45160.2 | 40.741 | 135 | 80 | 0 | 79 | 213 | 660 | 794 | 1.85e-28 | 112 |
Msa1115170 | AT1G45160.1 | 40.741 | 135 | 80 | 0 | 79 | 213 | 660 | 794 | 2.05e-28 | 112 |
Msa1115170 | AT3G08720.1 | 38.462 | 130 | 80 | 0 | 84 | 213 | 135 | 264 | 7.73e-27 | 107 |
Msa1115170 | AT3G08720.3 | 38.462 | 130 | 80 | 0 | 84 | 213 | 135 | 264 | 7.73e-27 | 107 |
Msa1115170 | AT3G08720.4 | 38.462 | 130 | 80 | 0 | 84 | 213 | 135 | 264 | 7.73e-27 | 107 |
Msa1115170 | AT3G08720.2 | 38.462 | 130 | 80 | 0 | 84 | 213 | 135 | 264 | 7.73e-27 | 107 |
Msa1115170 | AT3G08730.1 | 37.692 | 130 | 81 | 0 | 84 | 213 | 129 | 258 | 2.16e-26 | 105 |
Msa1115170 | AT3G08730.2 | 37.692 | 130 | 81 | 0 | 84 | 213 | 129 | 258 | 2.16e-26 | 105 |
Msa1115170 | AT5G04510.3 | 38.710 | 124 | 76 | 0 | 88 | 211 | 43 | 166 | 1.24e-22 | 93.6 |
Msa1115170 | AT5G04510.2 | 38.710 | 124 | 76 | 0 | 88 | 211 | 43 | 166 | 1.63e-22 | 94.4 |
Msa1115170 | AT5G04510.1 | 38.710 | 124 | 76 | 0 | 88 | 211 | 43 | 166 | 1.78e-22 | 95.1 |
Msa1115170 | AT3G10540.1 | 37.903 | 124 | 77 | 0 | 88 | 211 | 44 | 167 | 9.64e-22 | 92.8 |
Msa1115170 | AT3G45780.2 | 37.121 | 132 | 81 | 1 | 84 | 213 | 658 | 789 | 5.70e-21 | 90.9 |
Msa1115170 | AT3G45780.1 | 37.121 | 132 | 81 | 1 | 84 | 213 | 658 | 789 | 5.70e-21 | 90.9 |
Msa1115170 | AT5G58140.6 | 34.848 | 132 | 84 | 1 | 84 | 213 | 572 | 703 | 2.97e-19 | 85.9 |
Msa1115170 | AT5G58140.7 | 34.848 | 132 | 84 | 1 | 84 | 213 | 572 | 703 | 2.97e-19 | 85.9 |
Msa1115170 | AT5G58140.5 | 34.848 | 132 | 84 | 1 | 84 | 213 | 572 | 703 | 2.97e-19 | 85.9 |
Msa1115170 | AT5G58140.2 | 34.848 | 132 | 84 | 1 | 84 | 213 | 572 | 703 | 2.97e-19 | 85.9 |
Msa1115170 | AT5G58140.1 | 34.848 | 132 | 84 | 1 | 84 | 213 | 572 | 703 | 2.97e-19 | 85.9 |
Msa1115170 | AT5G58140.3 | 34.848 | 132 | 84 | 1 | 84 | 213 | 572 | 703 | 3.54e-19 | 85.9 |
Msa1115170 | AT1G79250.1 | 30.827 | 133 | 90 | 1 | 83 | 213 | 140 | 272 | 1.05e-18 | 84.3 |
Msa1115170 | AT1G79250.3 | 30.827 | 133 | 90 | 1 | 83 | 213 | 140 | 272 | 1.05e-18 | 84.3 |
Msa1115170 | AT1G79250.2 | 30.827 | 133 | 90 | 1 | 83 | 213 | 140 | 272 | 1.05e-18 | 84.3 |
Msa1115170 | AT1G79250.4 | 30.827 | 133 | 90 | 1 | 83 | 213 | 140 | 272 | 1.05e-18 | 84.3 |
Msa1115170 | AT3G12690.1 | 30.827 | 133 | 90 | 1 | 83 | 213 | 179 | 311 | 1.86e-18 | 83.6 |
Msa1115170 | AT3G12690.3 | 30.827 | 133 | 90 | 1 | 83 | 213 | 179 | 311 | 1.86e-18 | 83.6 |
Msa1115170 | AT3G12690.2 | 30.827 | 133 | 90 | 1 | 83 | 213 | 179 | 311 | 1.86e-18 | 83.6 |
Msa1115170 | AT1G16440.1 | 30.827 | 133 | 88 | 2 | 83 | 211 | 107 | 239 | 2.55e-18 | 83.2 |
Msa1115170 | AT5G55910.2 | 31.915 | 141 | 94 | 1 | 75 | 213 | 95 | 235 | 4.19e-18 | 82.4 |
Msa1115170 | AT5G55910.1 | 31.915 | 141 | 94 | 1 | 75 | 213 | 95 | 235 | 4.19e-18 | 82.4 |
Msa1115170 | AT4G26610.1 | 27.500 | 200 | 132 | 3 | 25 | 213 | 52 | 249 | 1.19e-17 | 81.3 |
Msa1115170 | AT2G26700.1 | 31.469 | 143 | 91 | 3 | 78 | 213 | 73 | 215 | 1.28e-17 | 81.3 |
Msa1115170 | AT2G36350.1 | 31.915 | 141 | 94 | 1 | 75 | 213 | 545 | 685 | 1.79e-17 | 80.9 |
Msa1115170 | AT5G47750.1 | 28.302 | 159 | 109 | 2 | 57 | 213 | 162 | 317 | 2.49e-17 | 80.1 |
Msa1115170 | AT2G44830.2 | 31.655 | 139 | 93 | 1 | 77 | 213 | 351 | 489 | 3.01e-17 | 80.1 |
Msa1115170 | AT2G44830.3 | 31.655 | 139 | 93 | 1 | 77 | 213 | 351 | 489 | 3.01e-17 | 80.1 |
Msa1115170 | AT2G44830.1 | 31.655 | 139 | 93 | 1 | 77 | 213 | 351 | 489 | 3.01e-17 | 80.1 |
Msa1115170 | AT3G52890.2 | 31.915 | 141 | 94 | 1 | 75 | 213 | 524 | 664 | 4.01e-17 | 79.7 |
Msa1115170 | AT3G52890.4 | 31.915 | 141 | 94 | 1 | 75 | 213 | 524 | 664 | 4.01e-17 | 79.7 |
Msa1115170 | AT3G52890.1 | 31.915 | 141 | 94 | 1 | 75 | 213 | 524 | 664 | 4.01e-17 | 79.7 |
Msa1115170 | AT3G52890.3 | 31.915 | 141 | 94 | 1 | 75 | 213 | 524 | 664 | 4.01e-17 | 79.7 |
Msa1115170 | AT4G32830.1 | 34.615 | 130 | 83 | 2 | 83 | 211 | 25 | 153 | 2.04e-15 | 73.6 |
Msa1115170 | AT2G25880.1 | 35.200 | 125 | 79 | 2 | 88 | 211 | 24 | 147 | 3.27e-15 | 73.2 |
Msa1115170 | AT2G25880.4 | 35.200 | 125 | 79 | 2 | 88 | 211 | 37 | 160 | 3.88e-15 | 72.8 |
Msa1115170 | AT2G34650.1 | 25.248 | 202 | 138 | 4 | 23 | 211 | 3 | 204 | 3.90e-15 | 73.6 |
Msa1115170 | AT4G24400.1 | 28.571 | 126 | 90 | 0 | 86 | 211 | 6 | 131 | 6.43e-15 | 73.2 |
Msa1115170 | AT4G24400.2 | 28.571 | 126 | 90 | 0 | 86 | 211 | 6 | 131 | 8.01e-15 | 72.8 |
Msa1115170 | AT2G25880.3 | 35.200 | 125 | 79 | 2 | 88 | 211 | 85 | 208 | 8.86e-15 | 72.4 |
Msa1115170 | AT2G45490.2 | 30.769 | 130 | 88 | 2 | 83 | 211 | 16 | 144 | 9.03e-15 | 71.2 |
Msa1115170 | AT2G45490.1 | 30.769 | 130 | 88 | 2 | 83 | 211 | 16 | 144 | 1.32e-14 | 71.2 |
Msa1115170 | AT5G03640.2 | 25.366 | 205 | 134 | 6 | 27 | 213 | 464 | 667 | 1.91e-14 | 72.0 |
Msa1115170 | AT5G03640.1 | 25.366 | 205 | 134 | 6 | 27 | 213 | 464 | 667 | 1.91e-14 | 72.0 |
Msa1115170 | AT3G27580.2 | 29.032 | 155 | 98 | 3 | 63 | 211 | 158 | 306 | 3.20e-14 | 71.2 |
Msa1115170 | AT3G27580.1 | 29.032 | 155 | 98 | 3 | 63 | 211 | 158 | 306 | 3.20e-14 | 71.2 |
Msa1115170 | AT5G58140.4 | 35.455 | 110 | 69 | 1 | 84 | 191 | 572 | 681 | 3.70e-14 | 71.2 |
Msa1115170 | AT2G26980.4 | 29.371 | 143 | 101 | 0 | 71 | 213 | 6 | 148 | 1.24e-13 | 69.3 |
Msa1115170 | AT5G40030.1 | 28.788 | 132 | 92 | 1 | 84 | 213 | 109 | 240 | 1.29e-13 | 69.3 |
Msa1115170 | AT2G26980.3 | 28.676 | 136 | 97 | 0 | 78 | 213 | 3 | 138 | 4.10e-13 | 67.8 |
Msa1115170 | AT2G26980.1 | 28.676 | 136 | 97 | 0 | 78 | 213 | 3 | 138 | 4.43e-13 | 67.8 |
Msa1115170 | AT5G25110.1 | 31.707 | 123 | 83 | 1 | 89 | 211 | 43 | 164 | 5.46e-13 | 67.4 |
Msa1115170 | AT2G26980.5 | 28.676 | 136 | 97 | 0 | 78 | 213 | 3 | 138 | 7.72e-13 | 67.0 |
Msa1115170 | AT2G26980.2 | 28.358 | 134 | 96 | 0 | 78 | 211 | 3 | 136 | 8.27e-13 | 66.2 |
Msa1115170 | AT3G01090.2 | 27.778 | 126 | 91 | 0 | 86 | 211 | 39 | 164 | 5.37e-12 | 64.7 |
Msa1115170 | AT2G25880.2 | 35.922 | 103 | 64 | 2 | 88 | 189 | 24 | 125 | 5.45e-12 | 63.5 |
Msa1115170 | AT3G01090.3 | 27.778 | 126 | 91 | 0 | 86 | 211 | 16 | 141 | 5.98e-12 | 64.7 |
Msa1115170 | AT3G01090.1 | 27.778 | 126 | 91 | 0 | 86 | 211 | 16 | 141 | 5.98e-12 | 64.7 |
Msa1115170 | AT5G35410.2 | 28.906 | 128 | 91 | 0 | 86 | 213 | 8 | 135 | 6.93e-12 | 63.9 |
Msa1115170 | AT5G35410.1 | 28.571 | 126 | 90 | 0 | 86 | 211 | 8 | 133 | 1.22e-11 | 63.5 |
Msa1115170 | AT4G18700.1 | 29.600 | 125 | 87 | 1 | 89 | 213 | 26 | 149 | 1.23e-11 | 63.5 |
Msa1115170 | AT5G45810.1 | 28.800 | 125 | 88 | 1 | 89 | 213 | 28 | 151 | 2.17e-11 | 62.8 |
Msa1115170 | AT1G76040.2 | 29.167 | 120 | 84 | 1 | 95 | 213 | 118 | 237 | 3.60e-11 | 62.4 |
Msa1115170 | AT1G76040.3 | 29.167 | 120 | 84 | 1 | 95 | 213 | 118 | 237 | 4.84e-11 | 62.0 |
Msa1115170 | AT3G29160.3 | 26.190 | 126 | 93 | 0 | 86 | 211 | 17 | 142 | 5.94e-11 | 61.2 |
Msa1115170 | AT3G29160.1 | 26.190 | 126 | 93 | 0 | 86 | 211 | 17 | 142 | 6.09e-11 | 61.6 |
Msa1115170 | AT3G29160.2 | 26.190 | 126 | 93 | 0 | 86 | 211 | 17 | 142 | 6.09e-11 | 61.6 |
Msa1115170 | AT5G12180.1 | 27.500 | 120 | 86 | 1 | 95 | 213 | 79 | 198 | 9.49e-11 | 60.8 |
Find 49 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCGTCTTCAAAGGCATAAAA+TGG | 0.198933 | 7_3:-62565006 | Msa1115170:CDS |
ATGATTGGAAAAGGTGCATT+TGG | 0.319275 | 7_3:-62564957 | Msa1115170:CDS |
TGAGTATTTATATCTTATTA+TGG | 0.330117 | 7_3:-62564525 | Msa1115170:CDS |
TTTGAGATGTTGACTATGAT+TGG | 0.332941 | 7_3:-62564972 | Msa1115170:CDS |
CTGTTTCTCCTACATAAAAT+CGG | 0.354150 | 7_3:+62564435 | None:intergenic |
TGATTGGAAAAGGTGCATTT+GGG | 0.359458 | 7_3:-62564956 | Msa1115170:CDS |
ATAAAATCGGGCTTCGTCTT+CGG | 0.376848 | 7_3:+62564448 | None:intergenic |
CCTTTGAAGACGCATATATT+CGG | 0.408948 | 7_3:+62565016 | None:intergenic |
GATATAAATACTCATCATCT+TGG | 0.422110 | 7_3:+62564534 | None:intergenic |
TTATGTAGGAGAAACAGTTT+TGG | 0.424226 | 7_3:-62564429 | Msa1115170:CDS |
ACTTAAATATTTAGCGAAGA+AGG | 0.466945 | 7_3:-62565042 | Msa1115170:CDS |
TGTTGCAGGTTAGAGTCTGC+AGG | 0.476496 | 7_3:-62564808 | Msa1115170:intron |
TCTTCGCTAAATATTTAAGT+AGG | 0.481927 | 7_3:+62565045 | None:intergenic |
AGCAGCAGCAACCTTCTGCT+TGG | 0.484654 | 7_3:+62566087 | None:intergenic |
GATGACTCTTCTTATGAGAA+AGG | 0.486332 | 7_3:-62564480 | Msa1115170:CDS |
AAATGGATTCAGCGAGGAGT+TGG | 0.488752 | 7_3:-62566228 | Msa1115170:CDS |
TCTTATTATGGAGTATCTAC+CGG | 0.498126 | 7_3:-62564513 | Msa1115170:CDS |
TGTTTCTCCTACATAAAATC+GGG | 0.509549 | 7_3:+62564436 | None:intergenic |
AACCTTCTGCTTGGTAACAT+TGG | 0.513014 | 7_3:+62566096 | None:intergenic |
CGTCTTCAAAGGCATAAAAT+GGG | 0.529990 | 7_3:-62565005 | Msa1115170:CDS |
GGAGATGCTTCGAAGAGGCC+AGG | 0.530986 | 7_3:-62564738 | Msa1115170:intron |
TTCCAATGTTACCAAGCAGA+AGG | 0.542405 | 7_3:-62566098 | Msa1115170:intron |
GAGAGCTTCAACGAGGAAGA+AGG | 0.551093 | 7_3:-62566176 | Msa1115170:CDS |
CCGAATATATGCGTCTTCAA+AGG | 0.551614 | 7_3:-62565016 | Msa1115170:CDS |
CGTCTCATCAACAACCGCAT+TGG | 0.552257 | 7_3:+62566126 | None:intergenic |
CTTATTATGGAGTATCTACC+GGG | 0.559126 | 7_3:-62564512 | Msa1115170:CDS |
AAGGCATAAAATGGGTGTTG+AGG | 0.559338 | 7_3:-62564997 | Msa1115170:CDS |
TTATGGAGTATCTACCGGGA+GGG | 0.561515 | 7_3:-62564508 | Msa1115170:CDS |
TATGGAGTATCTACCGGGAG+GGG | 0.562640 | 7_3:-62564507 | Msa1115170:CDS |
AGGAAGAAGGATGATGGTAA+TGG | 0.563395 | 7_3:-62566163 | Msa1115170:CDS |
AAGAAGGATGATGGTAATGG+CGG | 0.583438 | 7_3:-62566160 | Msa1115170:CDS |
ATAAACACAATTATATACAT+AGG | 0.583590 | 7_3:-62564391 | Msa1115170:CDS |
ATGTTGACTATGATTGGAAA+AGG | 0.583947 | 7_3:-62564966 | Msa1115170:CDS |
TCAACGAGGAAGAAGGATGA+TGG | 0.593250 | 7_3:-62566169 | Msa1115170:CDS |
GTTGCAGGTTAGAGTCTGCA+GGG | 0.595604 | 7_3:-62564807 | Msa1115170:intron |
TGGAAAAGGTGCATTTGGGG+AGG | 0.596591 | 7_3:-62564952 | Msa1115170:intron |
AGAGTCATCATATCCCCTCC+CGG | 0.604995 | 7_3:+62564494 | None:intergenic |
GATTGGAAAAGGTGCATTTG+GGG | 0.613723 | 7_3:-62564955 | Msa1115170:CDS |
CAATGCGGTTGTTGATGAGA+CGG | 0.620707 | 7_3:-62566125 | Msa1115170:CDS |
TGAGAGGAATCTCCTTGCAG+AGG | 0.645315 | 7_3:-62564594 | Msa1115170:CDS |
AATTGCTGTCAACCTCTGCA+AGG | 0.649727 | 7_3:+62564582 | None:intergenic |
GGCTGATGCTGATGTCTCTG+AGG | 0.651727 | 7_3:-62565081 | Msa1115170:CDS |
AAATCGGAGATGCTTCGAAG+AGG | 0.667256 | 7_3:-62564743 | Msa1115170:CDS |
ATTATGGAGTATCTACCGGG+AGG | 0.699270 | 7_3:-62564509 | Msa1115170:CDS |
TAGAACATGTCAGAGCTGAG+AGG | 0.701642 | 7_3:-62564610 | Msa1115170:CDS |
GAAGCTCTCAGTCTATCTCG+CGG | 0.711749 | 7_3:+62566190 | None:intergenic |
CGGAATAGATGACGCCAATG+CGG | 0.724074 | 7_3:-62566140 | Msa1115170:CDS |
TGAGGAAAATGGATTCAGCG+AGG | 0.755382 | 7_3:-62566234 | None:intergenic |
ATAGACTGAGAGCTTCAACG+AGG | 0.783061 | 7_3:-62566183 | Msa1115170:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TACACTATAAAATATATAAT+GGG | + | chr7_3:62565049-62565068 | None:intergenic | 10.0% |
!! | TTACACTATAAAATATATAA+TGG | + | chr7_3:62565050-62565069 | None:intergenic | 10.0% |
!! | TACACTATAAAATATATAAT+GGG | + | chr7_3:62565049-62565068 | None:intergenic | 10.0% |
!! | TTACACTATAAAATATATAA+TGG | + | chr7_3:62565050-62565069 | None:intergenic | 10.0% |
!!! | TTATAAATTTTGTGTTCATT+TGG | + | chr7_3:62564853-62564872 | None:intergenic | 15.0% |
!! | ACAATGAAATCATTATAATT+AGG | - | chr7_3:62564890-62564909 | Msa1115170:intron | 15.0% |
!! | CAATGAAATCATTATAATTA+GGG | - | chr7_3:62564891-62564910 | Msa1115170:intron | 15.0% |
!! | CTATAAAAAAATTGAAGATA+AGG | + | chr7_3:62564974-62564993 | None:intergenic | 15.0% |
!! | TAAAAAATATAATGCAGTAA+AGG | + | chr7_3:62565086-62565105 | None:intergenic | 15.0% |
!!! | TCATTGATTTTTTTTCTTAA+AGG | - | chr7_3:62565319-62565338 | Msa1115170:intron | 15.0% |
!!! | AATTTTATTCTATATTGTGT+TGG | - | chr7_3:62565430-62565449 | Msa1115170:intron | 15.0% |
!!! | ATTTTATTCTATATTGTGTT+GGG | - | chr7_3:62565431-62565450 | Msa1115170:intron | 15.0% |
!! | CAATAGAATATAATGTAATA+AGG | + | chr7_3:62565910-62565929 | None:intergenic | 15.0% |
!! | TGAGTATTTATATCTTATTA+TGG | - | chr7_3:62566083-62566102 | Msa1115170:intron | 15.0% |
!! | ATAAACACAATTATATACAT+AGG | - | chr7_3:62566217-62566236 | Msa1115170:CDS | 15.0% |
!!! | TTATAAATTTTGTGTTCATT+TGG | + | chr7_3:62564853-62564872 | None:intergenic | 15.0% |
!! | ACAATGAAATCATTATAATT+AGG | - | chr7_3:62564890-62564909 | Msa1115170:intron | 15.0% |
!! | CAATGAAATCATTATAATTA+GGG | - | chr7_3:62564891-62564910 | Msa1115170:intron | 15.0% |
!! | CTATAAAAAAATTGAAGATA+AGG | + | chr7_3:62564974-62564993 | None:intergenic | 15.0% |
!! | TAAAAAATATAATGCAGTAA+AGG | + | chr7_3:62565086-62565105 | None:intergenic | 15.0% |
!!! | TCATTGATTTTTTTTCTTAA+AGG | - | chr7_3:62565319-62565338 | Msa1115170:intron | 15.0% |
!!! | AATTTTATTCTATATTGTGT+TGG | - | chr7_3:62565430-62565449 | Msa1115170:intron | 15.0% |
!!! | ATTTTATTCTATATTGTGTT+GGG | - | chr7_3:62565431-62565450 | Msa1115170:intron | 15.0% |
!! | CAATAGAATATAATGTAATA+AGG | + | chr7_3:62565910-62565929 | None:intergenic | 15.0% |
!! | TGAGTATTTATATCTTATTA+TGG | - | chr7_3:62566083-62566102 | Msa1115170:intron | 15.0% |
!! | ATAAACACAATTATATACAT+AGG | - | chr7_3:62566217-62566236 | Msa1115170:CDS | 15.0% |
!! | AAATGAATTCATTCAAAATC+AGG | - | chr7_3:62564811-62564830 | Msa1115170:intron | 20.0% |
!! | TAATTCCTATACTAACTTAT+TGG | + | chr7_3:62565255-62565274 | None:intergenic | 20.0% |
!! | AGTATAGGAATTATATTTGA+AGG | - | chr7_3:62565262-62565281 | Msa1115170:intron | 20.0% |
!! | AATGAAAAAGCTAAAGAAAT+CGG | - | chr7_3:62565849-62565868 | Msa1115170:intron | 20.0% |
!! | AAATGAATTCATTCAAAATC+AGG | - | chr7_3:62564811-62564830 | Msa1115170:intron | 20.0% |
!! | TAATTCCTATACTAACTTAT+TGG | + | chr7_3:62565255-62565274 | None:intergenic | 20.0% |
!! | AGTATAGGAATTATATTTGA+AGG | - | chr7_3:62565262-62565281 | Msa1115170:intron | 20.0% |
!! | AATGAAAAAGCTAAAGAAAT+CGG | - | chr7_3:62565849-62565868 | Msa1115170:intron | 20.0% |
! | CATTGTATGAAAAATAAGAG+AGG | + | chr7_3:62564876-62564895 | None:intergenic | 25.0% |
! | AGTTTCACAAAAATCTATGT+AGG | + | chr7_3:62564934-62564953 | None:intergenic | 25.0% |
! | TATATTTGAAGGAAGTTAGT+AGG | - | chr7_3:62565273-62565292 | Msa1115170:intron | 25.0% |
! | GTTAGTAGGAATTATTATTG+TGG | - | chr7_3:62565287-62565306 | Msa1115170:intron | 25.0% |
! | GAATTATTATTGTGGATGAT+GGG | - | chr7_3:62565295-62565314 | Msa1115170:intron | 25.0% |
!!! | TACTAGTTCTTTTTCTCATT+TGG | - | chr7_3:62565366-62565385 | Msa1115170:intron | 25.0% |
! | TCTTCGCTAAATATTTAAGT+AGG | + | chr7_3:62565566-62565585 | None:intergenic | 25.0% |
! | ACTTAAATATTTAGCGAAGA+AGG | - | chr7_3:62565566-62565585 | Msa1115170:intron | 25.0% |
! | AAATTTCAAAATTCCAGTAG+AGG | + | chr7_3:62565781-62565800 | None:intergenic | 25.0% |
! | TCTATCTTTGCTAATTATTC+AGG | - | chr7_3:62565975-62565994 | Msa1115170:intron | 25.0% |
! | GATATAAATACTCATCATCT+TGG | + | chr7_3:62566077-62566096 | None:intergenic | 25.0% |
! | CATTGTATGAAAAATAAGAG+AGG | + | chr7_3:62564876-62564895 | None:intergenic | 25.0% |
! | AGTTTCACAAAAATCTATGT+AGG | + | chr7_3:62564934-62564953 | None:intergenic | 25.0% |
! | TATATTTGAAGGAAGTTAGT+AGG | - | chr7_3:62565273-62565292 | Msa1115170:intron | 25.0% |
! | GTTAGTAGGAATTATTATTG+TGG | - | chr7_3:62565287-62565306 | Msa1115170:intron | 25.0% |
! | GAATTATTATTGTGGATGAT+GGG | - | chr7_3:62565295-62565314 | Msa1115170:intron | 25.0% |
!!! | TACTAGTTCTTTTTCTCATT+TGG | - | chr7_3:62565366-62565385 | Msa1115170:intron | 25.0% |
! | TCTTCGCTAAATATTTAAGT+AGG | + | chr7_3:62565566-62565585 | None:intergenic | 25.0% |
! | ACTTAAATATTTAGCGAAGA+AGG | - | chr7_3:62565566-62565585 | Msa1115170:intron | 25.0% |
! | AAATTTCAAAATTCCAGTAG+AGG | + | chr7_3:62565781-62565800 | None:intergenic | 25.0% |
! | TCTATCTTTGCTAATTATTC+AGG | - | chr7_3:62565975-62565994 | Msa1115170:intron | 25.0% |
! | GATATAAATACTCATCATCT+TGG | + | chr7_3:62566077-62566096 | None:intergenic | 25.0% |
ATCTTCAAGAGAGAAAAGAA+CGG | - | chr7_3:62564584-62564603 | Msa1115170:CDS | 30.0% | |
CAAAACAAACATGCATGAAA+TGG | + | chr7_3:62564616-62564635 | None:intergenic | 30.0% | |
!!! | TGTTTTTTTACCGAATCATC+TGG | - | chr7_3:62564634-62564653 | Msa1115170:intron | 30.0% |
AGAATCAATTCCAGATGATT+CGG | + | chr7_3:62564647-62564666 | None:intergenic | 30.0% | |
GCGTTAACTTTAACTCTTTA+AGG | + | chr7_3:62564712-62564731 | None:intergenic | 30.0% | |
! | AAAGTGAGTTGAATGTAAAG+TGG | + | chr7_3:62564771-62564790 | None:intergenic | 30.0% |
!! | TAGTATACAAAAAGTGCTAC+AGG | - | chr7_3:62565107-62565126 | Msa1115170:intron | 30.0% |
ACAGGAGAAGTTATTATGAT+TGG | - | chr7_3:62565125-62565144 | Msa1115170:intron | 30.0% | |
!!! | ATTGGTGAGTCTTTTTTAAC+CGG | - | chr7_3:62565143-62565162 | Msa1115170:intron | 30.0% |
CAACTATTCTTGGAAAATTC+CGG | + | chr7_3:62565165-62565184 | None:intergenic | 30.0% | |
CAGTACCAATAAGTTAGTAT+AGG | - | chr7_3:62565247-62565266 | Msa1115170:intron | 30.0% | |
GGAATTATTATTGTGGATGA+TGG | - | chr7_3:62565294-62565313 | Msa1115170:intron | 30.0% | |
! | TTTGAGATGTTGACTATGAT+TGG | - | chr7_3:62565636-62565655 | Msa1115170:intron | 30.0% |
! | ATGTTGACTATGATTGGAAA+AGG | - | chr7_3:62565642-62565661 | Msa1115170:intron | 30.0% |
TGATTGCATCATATGAATTG+TGG | + | chr7_3:62565700-62565719 | None:intergenic | 30.0% | |
!!! | ATCAACTGCTCTTTTTTGTT+CGG | - | chr7_3:62565716-62565735 | Msa1115170:intron | 30.0% |
! | AGTAGAGGTATAACATTTAG+TGG | + | chr7_3:62565766-62565785 | None:intergenic | 30.0% |
ACTAAATGTTATACCTCTAC+TGG | - | chr7_3:62565765-62565784 | Msa1115170:intron | 30.0% | |
!!! | GGAATTTTGAAATTTGTTGC+AGG | - | chr7_3:62565786-62565805 | Msa1115170:intron | 30.0% |
! | TCTTATTATGGAGTATCTAC+CGG | - | chr7_3:62566095-62566114 | Msa1115170:intron | 30.0% |
TGTTTCTCCTACATAAAATC+GGG | + | chr7_3:62566175-62566194 | None:intergenic | 30.0% | |
! | CTGTTTCTCCTACATAAAAT+CGG | + | chr7_3:62566176-62566195 | None:intergenic | 30.0% |
! | TTATGTAGGAGAAACAGTTT+TGG | - | chr7_3:62566179-62566198 | Msa1115170:CDS | 30.0% |
ATCTTCAAGAGAGAAAAGAA+CGG | - | chr7_3:62564584-62564603 | Msa1115170:CDS | 30.0% | |
CAAAACAAACATGCATGAAA+TGG | + | chr7_3:62564616-62564635 | None:intergenic | 30.0% | |
!!! | TGTTTTTTTACCGAATCATC+TGG | - | chr7_3:62564634-62564653 | Msa1115170:intron | 30.0% |
AGAATCAATTCCAGATGATT+CGG | + | chr7_3:62564647-62564666 | None:intergenic | 30.0% | |
GCGTTAACTTTAACTCTTTA+AGG | + | chr7_3:62564712-62564731 | None:intergenic | 30.0% | |
! | AAAGTGAGTTGAATGTAAAG+TGG | + | chr7_3:62564771-62564790 | None:intergenic | 30.0% |
!! | TAGTATACAAAAAGTGCTAC+AGG | - | chr7_3:62565107-62565126 | Msa1115170:intron | 30.0% |
ACAGGAGAAGTTATTATGAT+TGG | - | chr7_3:62565125-62565144 | Msa1115170:intron | 30.0% | |
!!! | ATTGGTGAGTCTTTTTTAAC+CGG | - | chr7_3:62565143-62565162 | Msa1115170:intron | 30.0% |
CAACTATTCTTGGAAAATTC+CGG | + | chr7_3:62565165-62565184 | None:intergenic | 30.0% | |
CAGTACCAATAAGTTAGTAT+AGG | - | chr7_3:62565247-62565266 | Msa1115170:intron | 30.0% | |
GGAATTATTATTGTGGATGA+TGG | - | chr7_3:62565294-62565313 | Msa1115170:intron | 30.0% | |
! | TTTGAGATGTTGACTATGAT+TGG | - | chr7_3:62565636-62565655 | Msa1115170:intron | 30.0% |
! | ATGTTGACTATGATTGGAAA+AGG | - | chr7_3:62565642-62565661 | Msa1115170:intron | 30.0% |
TGATTGCATCATATGAATTG+TGG | + | chr7_3:62565700-62565719 | None:intergenic | 30.0% | |
!!! | ATCAACTGCTCTTTTTTGTT+CGG | - | chr7_3:62565716-62565735 | Msa1115170:intron | 30.0% |
! | AGTAGAGGTATAACATTTAG+TGG | + | chr7_3:62565766-62565785 | None:intergenic | 30.0% |
ACTAAATGTTATACCTCTAC+TGG | - | chr7_3:62565765-62565784 | Msa1115170:intron | 30.0% | |
!!! | GGAATTTTGAAATTTGTTGC+AGG | - | chr7_3:62565786-62565805 | Msa1115170:intron | 30.0% |
! | TCTTATTATGGAGTATCTAC+CGG | - | chr7_3:62566095-62566114 | Msa1115170:intron | 30.0% |
TGTTTCTCCTACATAAAATC+GGG | + | chr7_3:62566175-62566194 | None:intergenic | 30.0% | |
! | CTGTTTCTCCTACATAAAAT+CGG | + | chr7_3:62566176-62566195 | None:intergenic | 30.0% |
! | TTATGTAGGAGAAACAGTTT+TGG | - | chr7_3:62566179-62566198 | Msa1115170:CDS | 30.0% |
! | AACTTGAAGCTAGTAGCTTT+TGG | - | chr7_3:62564667-62564686 | Msa1115170:intron | 35.0% |
CCATCTGTTTCAACTATTCT+TGG | + | chr7_3:62565175-62565194 | None:intergenic | 35.0% | |
CCAAGAATAGTTGAAACAGA+TGG | - | chr7_3:62565172-62565191 | Msa1115170:intron | 35.0% | |
ATAGTTGAAACAGATGGATG+AGG | - | chr7_3:62565178-62565197 | Msa1115170:intron | 35.0% | |
ATGAGGTTCTATGACAATCA+GGG | - | chr7_3:62565195-62565214 | Msa1115170:intron | 35.0% | |
! | TCAAGCACAGACAAAACTTT+TGG | + | chr7_3:62565411-62565430 | None:intergenic | 35.0% |
AACCATCTTGGAAAAGAAGT+TGG | - | chr7_3:62565506-62565525 | Msa1115170:intron | 35.0% | |
! | CCTTTGAAGACGCATATATT+CGG | + | chr7_3:62565595-62565614 | None:intergenic | 35.0% |
! | CGTCTTCAAAGGCATAAAAT+GGG | - | chr7_3:62565603-62565622 | Msa1115170:intron | 35.0% |
! | ATGATTGGAAAAGGTGCATT+TGG | - | chr7_3:62565651-62565670 | Msa1115170:intron | 35.0% |
! | TGATTGGAAAAGGTGCATTT+GGG | - | chr7_3:62565652-62565671 | Msa1115170:intron | 35.0% |
! | AGGTATAACATTTAGTGGAC+GGG | + | chr7_3:62565761-62565780 | None:intergenic | 35.0% |
GAGGTATAACATTTAGTGGA+CGG | + | chr7_3:62565762-62565781 | None:intergenic | 35.0% | |
! | CTTATTATGGAGTATCTACC+GGG | - | chr7_3:62566096-62566115 | Msa1115170:intron | 35.0% |
GATGACTCTTCTTATGAGAA+AGG | - | chr7_3:62566128-62566147 | Msa1115170:CDS | 35.0% | |
! | AACTTGAAGCTAGTAGCTTT+TGG | - | chr7_3:62564667-62564686 | Msa1115170:intron | 35.0% |
CCATCTGTTTCAACTATTCT+TGG | + | chr7_3:62565175-62565194 | None:intergenic | 35.0% | |
CCAAGAATAGTTGAAACAGA+TGG | - | chr7_3:62565172-62565191 | Msa1115170:intron | 35.0% | |
ATAGTTGAAACAGATGGATG+AGG | - | chr7_3:62565178-62565197 | Msa1115170:intron | 35.0% | |
ATGAGGTTCTATGACAATCA+GGG | - | chr7_3:62565195-62565214 | Msa1115170:intron | 35.0% | |
! | TCAAGCACAGACAAAACTTT+TGG | + | chr7_3:62565411-62565430 | None:intergenic | 35.0% |
AACCATCTTGGAAAAGAAGT+TGG | - | chr7_3:62565506-62565525 | Msa1115170:intron | 35.0% | |
! | CCTTTGAAGACGCATATATT+CGG | + | chr7_3:62565595-62565614 | None:intergenic | 35.0% |
! | CGTCTTCAAAGGCATAAAAT+GGG | - | chr7_3:62565603-62565622 | Msa1115170:intron | 35.0% |
! | ATGATTGGAAAAGGTGCATT+TGG | - | chr7_3:62565651-62565670 | Msa1115170:intron | 35.0% |
! | TGATTGGAAAAGGTGCATTT+GGG | - | chr7_3:62565652-62565671 | Msa1115170:intron | 35.0% |
! | AGGTATAACATTTAGTGGAC+GGG | + | chr7_3:62565761-62565780 | None:intergenic | 35.0% |
GAGGTATAACATTTAGTGGA+CGG | + | chr7_3:62565762-62565781 | None:intergenic | 35.0% | |
! | CTTATTATGGAGTATCTACC+GGG | - | chr7_3:62566096-62566115 | Msa1115170:intron | 35.0% |
GATGACTCTTCTTATGAGAA+AGG | - | chr7_3:62566128-62566147 | Msa1115170:CDS | 35.0% | |
! | AGGAAGAAGGATGATGGTAA+TGG | - | chr7_3:62564445-62564464 | Msa1115170:CDS | 40.0% |
!! | AAGAAGGATGATGGTAATGG+CGG | - | chr7_3:62564448-62564467 | Msa1115170:CDS | 40.0% |
TTCCAATGTTACCAAGCAGA+AGG | - | chr7_3:62564510-62564529 | Msa1115170:CDS | 40.0% | |
! | AACCTTCTGCTTGGTAACAT+TGG | + | chr7_3:62564515-62564534 | None:intergenic | 40.0% |
GATGAGGTTCTATGACAATC+AGG | - | chr7_3:62565194-62565213 | Msa1115170:intron | 40.0% | |
TTGTAACAGTCGAACCATCT+TGG | - | chr7_3:62565494-62565513 | Msa1115170:intron | 40.0% | |
! | AGCCAACTTCTTTTCCAAGA+TGG | + | chr7_3:62565511-62565530 | None:intergenic | 40.0% |
CCGAATATATGCGTCTTCAA+AGG | - | chr7_3:62565592-62565611 | Msa1115170:intron | 40.0% | |
! | GCGTCTTCAAAGGCATAAAA+TGG | - | chr7_3:62565602-62565621 | Msa1115170:intron | 40.0% |
! | AAGGCATAAAATGGGTGTTG+AGG | - | chr7_3:62565611-62565630 | Msa1115170:intron | 40.0% |
! | GATTGGAAAAGGTGCATTTG+GGG | - | chr7_3:62565653-62565672 | Msa1115170:intron | 40.0% |
! | GGTATAACATTTAGTGGACG+GGG | + | chr7_3:62565760-62565779 | None:intergenic | 40.0% |
AAGGCAAATGACTACAAACC+TGG | + | chr7_3:62565891-62565910 | None:intergenic | 40.0% | |
ATAAAATCGGGCTTCGTCTT+CGG | + | chr7_3:62566163-62566182 | None:intergenic | 40.0% | |
! | AGGAAGAAGGATGATGGTAA+TGG | - | chr7_3:62564445-62564464 | Msa1115170:CDS | 40.0% |
!! | AAGAAGGATGATGGTAATGG+CGG | - | chr7_3:62564448-62564467 | Msa1115170:CDS | 40.0% |
TTCCAATGTTACCAAGCAGA+AGG | - | chr7_3:62564510-62564529 | Msa1115170:CDS | 40.0% | |
! | AACCTTCTGCTTGGTAACAT+TGG | + | chr7_3:62564515-62564534 | None:intergenic | 40.0% |
GATGAGGTTCTATGACAATC+AGG | - | chr7_3:62565194-62565213 | Msa1115170:intron | 40.0% | |
TTGTAACAGTCGAACCATCT+TGG | - | chr7_3:62565494-62565513 | Msa1115170:intron | 40.0% | |
! | AGCCAACTTCTTTTCCAAGA+TGG | + | chr7_3:62565511-62565530 | None:intergenic | 40.0% |
CCGAATATATGCGTCTTCAA+AGG | - | chr7_3:62565592-62565611 | Msa1115170:intron | 40.0% | |
! | GCGTCTTCAAAGGCATAAAA+TGG | - | chr7_3:62565602-62565621 | Msa1115170:intron | 40.0% |
! | AAGGCATAAAATGGGTGTTG+AGG | - | chr7_3:62565611-62565630 | Msa1115170:intron | 40.0% |
! | GATTGGAAAAGGTGCATTTG+GGG | - | chr7_3:62565653-62565672 | Msa1115170:intron | 40.0% |
! | GGTATAACATTTAGTGGACG+GGG | + | chr7_3:62565760-62565779 | None:intergenic | 40.0% |
AAGGCAAATGACTACAAACC+TGG | + | chr7_3:62565891-62565910 | None:intergenic | 40.0% | |
ATAAAATCGGGCTTCGTCTT+CGG | + | chr7_3:62566163-62566182 | None:intergenic | 40.0% | |
ATAGACTGAGAGCTTCAACG+AGG | - | chr7_3:62564425-62564444 | Msa1115170:CDS | 45.0% | |
TCAACGAGGAAGAAGGATGA+TGG | - | chr7_3:62564439-62564458 | Msa1115170:CDS | 45.0% | |
! | CAATGCGGTTGTTGATGAGA+CGG | - | chr7_3:62564483-62564502 | Msa1115170:CDS | 45.0% |
CTATATTGTGTTGGGTGTGC+TGG | - | chr7_3:62565439-62565458 | Msa1115170:intron | 45.0% | |
TGGTTCGACTGTTACAAGTG+AGG | + | chr7_3:62565491-62565510 | None:intergenic | 45.0% | |
AAATCGGAGATGCTTCGAAG+AGG | - | chr7_3:62565865-62565884 | Msa1115170:intron | 45.0% | |
TAGAACATGTCAGAGCTGAG+AGG | - | chr7_3:62565998-62566017 | Msa1115170:intron | 45.0% | |
AATTGCTGTCAACCTCTGCA+AGG | + | chr7_3:62566029-62566048 | None:intergenic | 45.0% | |
! | ATTATGGAGTATCTACCGGG+AGG | - | chr7_3:62566099-62566118 | Msa1115170:CDS | 45.0% |
! | TTATGGAGTATCTACCGGGA+GGG | - | chr7_3:62566100-62566119 | Msa1115170:CDS | 45.0% |
! | GACGAAGCCCGATTTTATGT+AGG | - | chr7_3:62566165-62566184 | Msa1115170:CDS | 45.0% |
ATAGACTGAGAGCTTCAACG+AGG | - | chr7_3:62564425-62564444 | Msa1115170:CDS | 45.0% | |
TCAACGAGGAAGAAGGATGA+TGG | - | chr7_3:62564439-62564458 | Msa1115170:CDS | 45.0% | |
! | CAATGCGGTTGTTGATGAGA+CGG | - | chr7_3:62564483-62564502 | Msa1115170:CDS | 45.0% |
CTATATTGTGTTGGGTGTGC+TGG | - | chr7_3:62565439-62565458 | Msa1115170:intron | 45.0% | |
TGGTTCGACTGTTACAAGTG+AGG | + | chr7_3:62565491-62565510 | None:intergenic | 45.0% | |
AAATCGGAGATGCTTCGAAG+AGG | - | chr7_3:62565865-62565884 | Msa1115170:intron | 45.0% | |
TAGAACATGTCAGAGCTGAG+AGG | - | chr7_3:62565998-62566017 | Msa1115170:intron | 45.0% | |
AATTGCTGTCAACCTCTGCA+AGG | + | chr7_3:62566029-62566048 | None:intergenic | 45.0% | |
! | ATTATGGAGTATCTACCGGG+AGG | - | chr7_3:62566099-62566118 | Msa1115170:CDS | 45.0% |
! | TTATGGAGTATCTACCGGGA+GGG | - | chr7_3:62566100-62566119 | Msa1115170:CDS | 45.0% |
! | GACGAAGCCCGATTTTATGT+AGG | - | chr7_3:62566165-62566184 | Msa1115170:CDS | 45.0% |
GAAGCTCTCAGTCTATCTCG+CGG | + | chr7_3:62564421-62564440 | None:intergenic | 50.0% | |
GAGAGCTTCAACGAGGAAGA+AGG | - | chr7_3:62564432-62564451 | Msa1115170:CDS | 50.0% | |
CGGAATAGATGACGCCAATG+CGG | - | chr7_3:62564468-62564487 | Msa1115170:CDS | 50.0% | |
CGTCTCATCAACAACCGCAT+TGG | + | chr7_3:62564485-62564504 | None:intergenic | 50.0% | |
! | TGGAAAAGGTGCATTTGGGG+AGG | - | chr7_3:62565656-62565675 | Msa1115170:intron | 50.0% |
TGTTGCAGGTTAGAGTCTGC+AGG | - | chr7_3:62565800-62565819 | Msa1115170:intron | 50.0% | |
GTTGCAGGTTAGAGTCTGCA+GGG | - | chr7_3:62565801-62565820 | Msa1115170:intron | 50.0% | |
TGAGAGGAATCTCCTTGCAG+AGG | - | chr7_3:62566014-62566033 | Msa1115170:intron | 50.0% | |
! | TATGGAGTATCTACCGGGAG+GGG | - | chr7_3:62566101-62566120 | Msa1115170:CDS | 50.0% |
AGAGTCATCATATCCCCTCC+CGG | + | chr7_3:62566117-62566136 | None:intergenic | 50.0% | |
GAAGCTCTCAGTCTATCTCG+CGG | + | chr7_3:62564421-62564440 | None:intergenic | 50.0% | |
GAGAGCTTCAACGAGGAAGA+AGG | - | chr7_3:62564432-62564451 | Msa1115170:CDS | 50.0% | |
CGGAATAGATGACGCCAATG+CGG | - | chr7_3:62564468-62564487 | Msa1115170:CDS | 50.0% | |
CGTCTCATCAACAACCGCAT+TGG | + | chr7_3:62564485-62564504 | None:intergenic | 50.0% | |
! | TGGAAAAGGTGCATTTGGGG+AGG | - | chr7_3:62565656-62565675 | Msa1115170:intron | 50.0% |
TGTTGCAGGTTAGAGTCTGC+AGG | - | chr7_3:62565800-62565819 | Msa1115170:intron | 50.0% | |
GTTGCAGGTTAGAGTCTGCA+GGG | - | chr7_3:62565801-62565820 | Msa1115170:intron | 50.0% | |
TGAGAGGAATCTCCTTGCAG+AGG | - | chr7_3:62566014-62566033 | Msa1115170:intron | 50.0% | |
! | TATGGAGTATCTACCGGGAG+GGG | - | chr7_3:62566101-62566120 | Msa1115170:CDS | 50.0% |
AGAGTCATCATATCCCCTCC+CGG | + | chr7_3:62566117-62566136 | None:intergenic | 50.0% | |
AGCAGCAGCAACCTTCTGCT+TGG | + | chr7_3:62564524-62564543 | None:intergenic | 55.0% | |
GGCTGATGCTGATGTCTCTG+AGG | - | chr7_3:62565527-62565546 | Msa1115170:intron | 55.0% | |
AGCAGCAGCAACCTTCTGCT+TGG | + | chr7_3:62564524-62564543 | None:intergenic | 55.0% | |
GGCTGATGCTGATGTCTCTG+AGG | - | chr7_3:62565527-62565546 | Msa1115170:intron | 55.0% | |
GGAGATGCTTCGAAGAGGCC+AGG | - | chr7_3:62565870-62565889 | Msa1115170:intron | 60.0% | |
GGAGATGCTTCGAAGAGGCC+AGG | - | chr7_3:62565870-62565889 | Msa1115170:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 62564382 | 62566248 | 62564382 | ID=Msa1115170;Name=Msa1115170 |
chr7_3 | mRNA | 62564382 | 62566248 | 62564382 | ID=Msa1115170-mRNA-1;Parent=Msa1115170;Name=Msa1115170-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|1|0.66|0.5|4|0|213 |
chr7_3 | exon | 62566099 | 62566248 | 62566099 | ID=Msa1115170-mRNA-1:exon:14439;Parent=Msa1115170-mRNA-1 |
chr7_3 | exon | 62564953 | 62565108 | 62564953 | ID=Msa1115170-mRNA-1:exon:14438;Parent=Msa1115170-mRNA-1 |
chr7_3 | exon | 62564739 | 62564822 | 62564739 | ID=Msa1115170-mRNA-1:exon:14437;Parent=Msa1115170-mRNA-1 |
chr7_3 | exon | 62564382 | 62564633 | 62564382 | ID=Msa1115170-mRNA-1:exon:14436;Parent=Msa1115170-mRNA-1 |
chr7_3 | CDS | 62566099 | 62566248 | 62566099 | ID=Msa1115170-mRNA-1:cds;Parent=Msa1115170-mRNA-1 |
chr7_3 | CDS | 62564953 | 62565108 | 62564953 | ID=Msa1115170-mRNA-1:cds;Parent=Msa1115170-mRNA-1 |
chr7_3 | CDS | 62564739 | 62564822 | 62564739 | ID=Msa1115170-mRNA-1:cds;Parent=Msa1115170-mRNA-1 |
chr7_3 | CDS | 62564382 | 62564633 | 62564382 | ID=Msa1115170-mRNA-1:cds;Parent=Msa1115170-mRNA-1 |
Gene Sequence |
Protein sequence |