AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1125520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1125520 MtrunA17_Chr7g0266251 98.913 184 2 0 1 184 1 184 3.36e-134 379
Msa1125520 MtrunA17_Chr8g0352821 32.000 150 89 5 35 182 280 418 3.18e-18 82.0
Msa1125520 MtrunA17_Chr8g0352821 27.564 156 96 6 41 189 242 387 7.29e-12 63.5
Msa1125520 MtrunA17_Chr5g0401661 25.926 243 119 5 6 196 325 558 4.68e-17 78.6
Msa1125520 MtrunA17_Chr5g0401661 29.032 186 106 7 9 185 513 681 3.07e-16 76.3
Msa1125520 MtrunA17_Chr5g0401661 24.783 230 104 8 9 184 383 597 8.88e-13 66.2
Msa1125520 MtrunA17_Chr2g0283891 31.606 193 114 8 9 197 100 278 5.05e-17 77.4
Msa1125520 MtrunA17_Chr5g0401671 28.452 239 112 6 8 196 239 468 2.59e-16 76.6
Msa1125520 MtrunA17_Chr5g0401671 27.419 186 109 7 9 185 423 591 8.10e-15 72.0
Msa1125520 MtrunA17_Chr3g0136971 29.825 171 104 4 12 182 415 569 8.31e-16 75.1
Msa1125520 MtrunA17_Chr3g0136971 29.651 172 105 5 13 184 458 613 5.94e-14 69.7
Msa1125520 MtrunA17_Chr1g0176241 29.947 187 109 7 12 193 115 284 2.28e-15 73.6
Msa1125520 MtrunA17_Chr1g0176241 29.139 151 98 3 34 184 339 480 2.66e-13 67.8
Msa1125520 MtrunA17_Chr4g0053651 30.220 182 100 7 10 182 407 570 7.73e-15 72.4
Msa1125520 MtrunA17_Chr4g0053651 25.532 235 116 5 12 196 226 451 1.64e-13 68.6
Msa1125520 MtrunA17_Chr4g0053651 30.573 157 90 3 59 200 220 372 4.87e-11 61.2
Msa1125520 MtrunA17_Chr4g0067151 26.702 191 123 6 4 193 66 240 1.08e-14 71.2
Msa1125520 MtrunA17_Chr4g0067151 28.030 132 82 3 63 184 18 146 6.72e-11 60.5
Msa1125520 MtrunA17_Chr1g0185501 31.356 118 76 2 67 184 25 137 1.24e-14 70.9
Msa1125520 MtrunA17_Chr1g0185501 29.747 158 101 3 36 193 41 188 3.17e-13 67.0
Msa1125520 MtrunA17_Chr1g0185501 26.519 181 115 5 7 184 144 309 6.72e-11 60.5
Msa1125520 MtrunA17_Chr2g0321211 29.688 192 103 7 18 187 15 196 8.35e-14 69.3
Msa1125520 MtrunA17_Chr3g0093681 28.042 189 120 6 6 194 304 476 2.36e-13 67.8
Msa1125520 MtrunA17_Chr3g0093681 29.630 135 81 4 7 140 431 552 7.98e-13 66.2
Msa1125520 MtrunA17_Chr1g0172501 28.042 189 120 6 6 194 304 476 2.75e-13 67.8
Msa1125520 MtrunA17_Chr1g0172501 29.630 135 81 4 7 140 431 552 3.88e-13 67.4
Msa1125520 MtrunA17_Chr4g0026671 27.179 195 108 5 18 187 15 200 7.54e-13 66.6
Msa1125520 MtrunA17_Chr4g0035611 27.429 175 109 6 11 184 4 161 1.11e-11 63.2
Msa1125520 MtrunA17_Chr5g0405851 28.902 173 106 6 13 184 292 448 1.11e-11 62.8
Msa1125520 MtrunA17_Chr5g0405851 28.205 156 89 5 7 161 328 461 7.41e-11 60.5
Msa1125520 MtrunA17_Chr6g0448921 26.111 180 116 5 5 184 90 252 1.34e-11 62.8
Msa1125520 MtrunA17_Chr2g0331981 27.568 185 110 9 6 184 89 255 1.54e-11 62.8
Msa1125520 MtrunA17_Chr4g0069701 27.333 150 95 5 36 183 78 215 2.26e-11 62.4
Msa1125520 MtrunA17_Chr4g0004241 27.027 185 111 9 6 184 89 255 3.83e-11 61.6
Msa1125520 MtrunA17_Chr1g0197551 26.286 175 111 6 11 184 4 161 4.45e-11 61.6
Msa1125520 MtrunA17_Chr7g0253861 29.252 147 88 5 43 182 203 340 8.96e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1125520 AT2G26060.1 76.344 186 42 2 1 184 4 189 2.50e-100 294
Msa1125520 AT2G26060.2 76.344 186 42 2 1 184 4 189 2.76e-100 293
Msa1125520 AT4G32990.2 56.216 185 54 4 2 184 6 165 7.53e-63 196
Msa1125520 AT4G32990.2 32.821 195 107 10 7 185 83 269 5.23e-16 74.7
Msa1125520 AT4G32990.1 56.216 185 54 4 2 184 6 165 8.02e-63 198
Msa1125520 AT4G32990.1 33.161 193 105 10 9 185 85 269 5.66e-16 75.1
Msa1125520 AT5G13480.2 32.886 149 89 4 35 182 231 369 3.80e-18 82.4
Msa1125520 AT5G13480.2 26.554 177 106 7 12 184 172 328 4.21e-11 61.6
Msa1125520 AT5G13480.1 32.886 149 89 4 35 182 220 358 4.42e-18 82.0
Msa1125520 AT5G13480.1 26.554 177 106 7 12 184 161 317 4.83e-11 61.6
Msa1125520 AT5G13480.3 32.886 149 89 4 35 182 208 346 4.49e-18 82.0
Msa1125520 AT5G13480.3 26.554 177 106 7 12 184 149 305 5.01e-11 61.6
Msa1125520 AT5G13480.4 32.886 149 89 4 35 182 208 346 5.12e-18 82.0
Msa1125520 AT5G13480.4 26.554 177 106 7 12 184 149 305 5.39e-11 61.6
Msa1125520 AT5G52820.1 30.688 189 110 6 10 193 103 275 8.30e-17 78.2
Msa1125520 AT5G52820.1 32.450 151 93 4 34 184 329 470 5.63e-15 72.8
Msa1125520 AT5G67320.1 26.695 236 114 5 8 193 257 483 1.32e-16 77.8
Msa1125520 AT5G67320.1 28.947 190 109 7 5 185 437 609 8.51e-16 75.5
Msa1125520 AT5G67320.1 34.667 150 79 3 66 200 262 407 1.07e-14 72.4
Msa1125520 AT5G67320.1 27.753 227 101 8 19 197 327 538 3.96e-13 67.8
Msa1125520 AT4G02730.1 28.022 182 108 5 7 184 34 196 2.61e-15 73.2
Msa1125520 AT4G02730.1 25.405 185 124 5 9 193 78 248 3.17e-14 70.5
Msa1125520 AT5G25150.1 31.395 172 100 5 12 182 414 568 3.40e-15 73.6
Msa1125520 AT5G25150.1 29.070 172 106 5 13 184 457 612 4.50e-14 70.5
Msa1125520 AT5G25150.1 27.647 170 108 5 1 170 489 643 1.32e-12 66.2
Msa1125520 AT5G25150.2 31.395 172 100 5 12 182 414 568 3.63e-15 73.6
Msa1125520 AT5G25150.2 29.070 172 106 5 13 184 457 612 5.04e-14 70.5
Msa1125520 AT5G25150.2 27.647 170 108 5 1 170 489 643 1.51e-12 65.9
Msa1125520 AT2G41500.1 27.119 177 112 5 9 184 332 492 6.30e-15 72.8
Msa1125520 AT2G41500.1 31.655 139 80 5 12 149 419 543 1.83e-13 68.6
Msa1125520 AT2G41500.1 28.249 177 102 6 12 184 294 449 2.76e-13 68.2
Msa1125520 AT2G41500.1 28.743 167 105 5 36 199 269 424 4.77e-12 64.3
Msa1125520 AT2G41500.2 27.119 177 112 5 9 184 332 492 6.30e-15 72.8
Msa1125520 AT2G41500.2 31.655 139 80 5 12 149 419 543 1.83e-13 68.6
Msa1125520 AT2G41500.2 28.249 177 102 6 12 184 294 449 2.76e-13 68.2
Msa1125520 AT2G41500.2 28.743 167 105 5 36 199 269 424 4.77e-12 64.3
Msa1125520 AT1G11160.3 26.630 184 110 7 5 184 47 209 9.97e-14 69.7
Msa1125520 AT1G11160.1 26.630 184 110 7 5 184 89 251 1.00e-13 69.7
Msa1125520 AT1G11160.2 26.630 184 110 7 5 184 89 251 1.03e-13 69.3
Msa1125520 AT1G11160.4 26.630 184 110 7 5 184 89 251 1.11e-13 69.3
Msa1125520 AT2G43770.1 31.973 147 84 5 43 182 201 338 1.79e-13 68.2
Msa1125520 AT3G49660.1 28.472 144 98 2 36 179 38 176 6.64e-13 66.6
Msa1125520 AT3G49660.1 28.177 181 112 5 7 184 146 311 1.20e-12 65.9
Msa1125520 AT3G49660.1 28.926 121 80 3 67 184 22 139 1.04e-11 63.2
Msa1125520 AT5G16750.1 30.061 163 96 6 30 184 20 172 7.86e-13 67.0
Msa1125520 AT3G44530.1 31.034 174 92 6 37 187 28 196 1.01e-12 66.6
Msa1125520 AT3G44530.2 31.034 174 92 6 37 187 28 196 1.14e-12 66.6
Msa1125520 AT2G21390.1 26.857 175 110 6 11 184 4 161 1.90e-11 62.8
Msa1125520 AT1G62020.1 27.429 175 109 6 11 184 4 161 2.23e-11 62.8
Msa1125520 AT3G15980.7 27.473 182 114 9 6 184 89 255 2.25e-11 62.8
Msa1125520 AT3G15980.5 27.473 182 114 9 6 184 89 255 2.34e-11 62.8
Msa1125520 AT3G15980.1 27.473 182 114 9 6 184 89 255 2.42e-11 62.4
Msa1125520 AT1G61210.3 23.889 180 120 6 5 184 89 251 2.44e-11 62.8
Msa1125520 AT3G15980.3 27.473 182 114 9 6 184 89 255 2.88e-11 62.4
Msa1125520 AT3G15980.6 27.473 182 114 9 6 184 89 255 2.88e-11 62.4
Msa1125520 AT3G15980.2 27.473 182 114 9 6 184 89 255 2.88e-11 62.4
Msa1125520 AT3G15980.4 27.473 182 114 9 6 184 89 255 2.88e-11 62.4
Msa1125520 AT2G33340.3 34.000 100 64 1 80 179 233 330 3.16e-11 62.0
Msa1125520 AT2G33340.2 34.000 100 64 1 80 179 233 330 3.46e-11 62.0
Msa1125520 AT2G33340.1 34.000 100 64 1 80 179 233 330 3.46e-11 62.0
Msa1125520 AT1G79990.2 27.027 185 111 9 6 184 89 255 4.08e-11 62.0
Msa1125520 AT1G79990.1 27.027 185 111 9 6 184 89 255 4.45e-11 61.6
Msa1125520 AT1G61210.2 23.889 180 120 6 5 184 89 251 4.47e-11 62.0
Msa1125520 AT1G61210.1 23.889 180 120 6 5 184 89 251 4.60e-11 61.6
Msa1125520 AT1G71840.1 31.111 135 82 4 7 141 275 398 6.49e-11 60.8
Msa1125520 AT1G52360.2 26.923 182 115 9 6 184 133 299 7.13e-11 61.2
Msa1125520 AT1G52360.3 26.923 182 115 9 6 184 89 255 7.49e-11 61.2
Msa1125520 AT1G52360.4 26.923 182 115 9 6 184 89 255 8.39e-11 60.8
Msa1125520 AT1G52360.1 26.923 182 115 9 6 184 89 255 8.39e-11 60.8

Find 92 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTCCACCATCTCTGTTTA+AGG 0.187325 7_3:+77023675 Msa1125520:five_prime_UTR
GCGATAAAACTGTTCGAATC+TGG 0.249563 7_3:+77024831 Msa1125520:CDS
GAGATAAGTCTGTTTGGATA+TGG 0.270051 7_3:+77025387 Msa1125520:CDS
TACCGATAGGGTTTGGAGTT+TGG 0.280993 7_3:+77024751 Msa1125520:CDS
TAGCTATGATAATAATATTA+AGG 0.336062 7_3:+77025517 Msa1125520:CDS
CATCCTGGGTATGTCCTTGC+AGG 0.342386 7_3:-77025448 None:intergenic
ACATACCCAGGATGTGAAAA+TGG 0.352627 7_3:+77025457 Msa1125520:CDS
AAGAGAGAGAGGTACCTTGC+AGG 0.366664 7_3:-77024882 None:intergenic
CAATGAGTTTGAGTGTGTTT+CGG 0.369193 7_3:+77025424 Msa1125520:CDS
CTGCCATATGGGAAAATGTT+GGG 0.373686 7_3:+77025130 Msa1125520:CDS
ATTGAAAGAAGTTCAGAAAC+TGG 0.381958 7_3:+77024721 Msa1125520:CDS
CCACTGTCAGGGGCGGACCT+TGG 0.389682 7_3:-77024576 None:intergenic
AAATGAAATGCAGGCGACTC+TGG 0.400572 7_3:+77025023 Msa1125520:intron
CGATAAAACTGTTCGAATCT+GGG 0.401567 7_3:+77024832 Msa1125520:CDS
AGTGAAATCAATGGAGAGAT+TGG 0.412657 7_3:+77024697 Msa1125520:exon
TGGTGGGCTGTCGTCGGTGG+TGG 0.424221 7_3:-77023621 None:intergenic
GGGCTGTCGTCGGTGGTGGC+CGG 0.426667 7_3:-77023617 None:intergenic
CGTCGGTGGTGGCCGGTGGG+TGG 0.428234 7_3:-77023610 None:intergenic
TCTTGTGCTTGGTCACCGTC+TGG 0.439570 7_3:+77025072 Msa1125520:CDS
GTCGGTGGTGGCCGGTGGGT+GGG 0.440299 7_3:-77023609 None:intergenic
ATTTGAGTGTGTCTCTACTT+TGG 0.441333 7_3:+77025158 Msa1125520:CDS
CTGTCGTCGGTGGTGGCCGG+TGG 0.443304 7_3:-77023614 None:intergenic
TTGATGCCACCACTGCCATA+TGG 0.446527 7_3:+77025118 Msa1125520:CDS
AATTGTGATTACCCACTGTC+AGG 0.451494 7_3:-77024588 None:intergenic
CTGTGTGCCTGTATCGTGTT+TGG 0.452475 7_3:-77023559 None:intergenic
AGATAAGTCTGTTTGGATAT+GGG 0.456794 7_3:+77025388 Msa1125520:CDS
GAAAATAATATATCCTCCGT+TGG 0.459187 7_3:-77025491 None:intergenic
AAGGTCATACCGATAGGGTT+TGG 0.461925 7_3:+77024744 Msa1125520:CDS
GTATGGTTGGTGAACGGTGG+TGG 0.462175 7_3:-77023638 None:intergenic
GTAGTAGAGATAAGTCTGTT+TGG 0.463301 7_3:+77025381 Msa1125520:CDS
GAGGTACCTTGCAGGAGAAA+AGG 0.471260 7_3:-77024874 None:intergenic
ATAGGGTTTGGAGTTTGGAT+TGG 0.476411 7_3:+77024756 Msa1125520:CDS
CTTCTTCAGTCTACAAGCTA+TGG 0.477415 7_3:-77024655 None:intergenic
ACACCGGCATGACCGGTAGC+AGG 0.479177 7_3:-77024782 None:intergenic
TGAGTGTGTCTCTACTTTGG+AGG 0.481790 7_3:+77025161 Msa1125520:CDS
GAACGGTGGTGGGCTGTCGT+CGG 0.484775 7_3:-77023627 None:intergenic
TGATGCCACCACTGCCATAT+GGG 0.485763 7_3:+77025119 Msa1125520:CDS
ACACACTCAAACTCATTGCC+TGG 0.490664 7_3:-77025419 None:intergenic
GGTAATGCAAACGCTAGAAA+AGG 0.496342 7_3:+77025538 Msa1125520:CDS
GATGGTGGAGCGAGCGACAG+AGG 0.498389 7_3:-77023664 None:intergenic
TGGATATGGGAAGTGCAGCC+AGG 0.504141 7_3:+77025401 Msa1125520:CDS
AAAATAATATATCCTCCGTT+GGG 0.504876 7_3:-77025490 None:intergenic
GAGGGGAACACCGGCATGAC+CGG 0.505380 7_3:-77024789 None:intergenic
CGCTGCAAGAAGCGAAGATG+AGG 0.507959 7_3:-77024808 None:intergenic
CGGTGGTGGGCTGTCGTCGG+TGG 0.513127 7_3:-77023624 None:intergenic
CTTGCAGGAGAAAAGGTTAG+TGG 0.513133 7_3:-77024867 None:intergenic
GAACTGTTCGATCTTGTGCT+TGG 0.514654 7_3:+77025061 Msa1125520:CDS
TGTCGTCGGTGGTGGCCGGT+GGG 0.516502 7_3:-77023613 None:intergenic
AGGAGAAAAGGTTAGTGGAG+AGG 0.519053 7_3:-77024862 None:intergenic
CCAAGGTCCGCCCCTGACAG+TGG 0.522058 7_3:+77024576 Msa1125520:five_prime_UTR
TATGGTTGGTGAACGGTGGT+GGG 0.529250 7_3:-77023637 None:intergenic
AACCCTGCTACCGGTCATGC+CGG 0.529438 7_3:+77024779 Msa1125520:CDS
AGTGTGTCTTGGAATGCATC+GGG 0.531316 7_3:+77025341 Msa1125520:CDS
ATGAAGTCAAGAGTGTGTCT+TGG 0.534763 7_3:+77025330 Msa1125520:CDS
GAGTGTGTCTTGGAATGCAT+CGG 0.537721 7_3:+77025340 Msa1125520:CDS
CTCATCTTCGCTTCTTGCAG+CGG 0.537861 7_3:+77024809 Msa1125520:CDS
GCGACAGAGGTTGGTATGGT+TGG 0.538166 7_3:-77023651 None:intergenic
TTGGATTGGAACCCTGCTAC+CGG 0.541963 7_3:+77024770 Msa1125520:CDS
ATCCAAACTCCAAACCCTAT+CGG 0.545636 7_3:-77024753 None:intergenic
TGCCATATGGGAAAATGTTG+GGG 0.548737 7_3:+77025131 Msa1125520:CDS
TTGGTATGGTTGGTGAACGG+TGG 0.551210 7_3:-77023641 None:intergenic
AGTGCACTGTGCCCACCCAC+CGG 0.565496 7_3:+77023598 Msa1125520:five_prime_UTR
GAGTGTGTTTCGGTCCTGCA+AGG 0.565519 7_3:+77025434 Msa1125520:CDS
GCGAGCGACAGAGGTTGGTA+TGG 0.573122 7_3:-77023655 None:intergenic
CAAGGTCCGCCCCTGACAGT+GGG 0.575086 7_3:+77024577 Msa1125520:five_prime_UTR
GTGGAGCGAGCGACAGAGGT+TGG 0.580913 7_3:-77023660 None:intergenic
CACCGGCATGACCGGTAGCA+GGG 0.585161 7_3:-77024781 None:intergenic
AACTGGAAGGTCATACCGAT+AGG 0.585691 7_3:+77024738 Msa1125520:CDS
AGCGAAGATGAGGGGAACAC+CGG 0.589132 7_3:-77024798 None:intergenic
GCTGCAAGAAGCGAAGATGA+GGG 0.591754 7_3:-77024807 None:intergenic
ATTGTGATTACCCACTGTCA+GGG 0.593522 7_3:-77024587 None:intergenic
GAAGCATGTAAAACTAGGAA+CGG 0.598218 7_3:-77025583 None:intergenic
GGCTGTGCAAGTGAAATCAA+TGG 0.603053 7_3:+77024688 Msa1125520:exon
AAAGAAGTTCAGAAACTGGA+AGG 0.607202 7_3:+77024725 Msa1125520:CDS
ACTGGAAGGTCATACCGATA+GGG 0.614882 7_3:+77024739 Msa1125520:CDS
AATGGTGAGGTGGCACCCAA+CGG 0.617393 7_3:+77025475 Msa1125520:CDS
ACTGCCATATGGGAAAATGT+TGG 0.620101 7_3:+77025129 Msa1125520:CDS
AAACTGACCTTAAACAGAGA+TGG 0.624995 7_3:-77023682 None:intergenic
GACTGAAGAAGACACGGTTG+AGG 0.625243 7_3:+77024667 Msa1125520:five_prime_UTR
CTTGTAGACTGAAGAAGACA+CGG 0.626497 7_3:+77024661 Msa1125520:five_prime_UTR
CTGACCTTAAACAGAGATGG+TGG 0.633992 7_3:-77023679 None:intergenic
TTGTGATTACCCACTGTCAG+GGG 0.644933 7_3:-77024586 None:intergenic
CTGCAAGAAGCGAAGATGAG+GGG 0.647961 7_3:-77024806 None:intergenic
TGATTACCCACTGTCAGGGG+CGG 0.657597 7_3:-77024583 None:intergenic
GGTGAGGTGGCACCCAACGG+AGG 0.658562 7_3:+77025478 Msa1125520:CDS
AGGTTGGTATGGTTGGTGAA+CGG 0.661301 7_3:-77023644 None:intergenic
GGTGGCATCAAAGCTTGCAG+TGG 0.678013 7_3:-77025106 None:intergenic
GGTCCTGCAAGGACATACCC+AGG 0.686844 7_3:+77025445 Msa1125520:CDS
GTCGGACTTGAACTAGAGCG+TGG 0.691755 7_3:+77023443 Msa1125520:five_prime_UTR
CCCAGGATGTGAAAATGGTG+AGG 0.708699 7_3:+77025462 Msa1125520:CDS
GCCATATGGGAAAATGTTGG+GGG 0.709125 7_3:+77025132 Msa1125520:CDS
AGGATGTGAAAATGGTGAGG+TGG 0.710383 7_3:+77025465 Msa1125520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAAACAAAAAAAAAAAA+TGG + chr7_3:77023861-77023880 Msa1125520:intron 10.0%
!!! ATATTATTTGAAATTGAATT+AGG + chr7_3:77023968-77023987 Msa1125520:intron 10.0%
!! AGAAAAACAAAAAAAAAAAA+TGG + chr7_3:77023861-77023880 Msa1125520:intron 10.0%
!!! ATATTATTTGAAATTGAATT+AGG + chr7_3:77023968-77023987 Msa1125520:intron 10.0%
!!! TAGCTTTTATAAATATCATT+AGG + chr7_3:77023922-77023941 Msa1125520:intron 15.0%
!!! TTATAAATATCATTAGGTTT+TGG + chr7_3:77023928-77023947 Msa1125520:intron 15.0%
!!! TATATTGATTATGTGATTTA+AGG + chr7_3:77024190-77024209 Msa1125520:intron 15.0%
!!! ATTTTATGAATTTATCTGTT+CGG + chr7_3:77024215-77024234 Msa1125520:intron 15.0%
!! ATAAATAAATATCTTGAGTT+AGG + chr7_3:77024269-77024288 Msa1125520:intron 15.0%
!!! TGACATATATGTAAATTTTA+TGG + chr7_3:77025293-77025312 Msa1125520:intron 15.0%
!! TAGCTATGATAATAATATTA+AGG + chr7_3:77025517-77025536 Msa1125520:CDS 15.0%
!!! TAGCTTTTATAAATATCATT+AGG + chr7_3:77023922-77023941 Msa1125520:intron 15.0%
!!! TTATAAATATCATTAGGTTT+TGG + chr7_3:77023928-77023947 Msa1125520:intron 15.0%
!!! TATATTGATTATGTGATTTA+AGG + chr7_3:77024190-77024209 Msa1125520:intron 15.0%
!!! ATTTTATGAATTTATCTGTT+CGG + chr7_3:77024215-77024234 Msa1125520:intron 15.0%
!! ATAAATAAATATCTTGAGTT+AGG + chr7_3:77024269-77024288 Msa1125520:intron 15.0%
!!! TGACATATATGTAAATTTTA+TGG + chr7_3:77025293-77025312 Msa1125520:intron 15.0%
!! TAGCTATGATAATAATATTA+AGG + chr7_3:77025517-77025536 Msa1125520:CDS 15.0%
!! AACACGATTTCAATTAAAAA+GGG - chr7_3:77023732-77023751 None:intergenic 20.0%
!! AAACACGATTTCAATTAAAA+AGG - chr7_3:77023733-77023752 None:intergenic 20.0%
!!! AAAAAAAAATGGCTCAATTT+TGG + chr7_3:77023872-77023891 Msa1125520:intron 20.0%
!!! TTTTGTTGTATAATTGAACT+GGG + chr7_3:77024044-77024063 Msa1125520:intron 20.0%
!!! TAATCACAATTTTGTAAGTT+TGG + chr7_3:77024600-77024619 Msa1125520:five_prime_UTR 20.0%
!!! CTTTTCAATATTCATGTATA+TGG + chr7_3:77024919-77024938 Msa1125520:intron 20.0%
!!! ATATCCATATTTTGATTGTT+TGG + chr7_3:77024960-77024979 Msa1125520:intron 20.0%
!! AAAGAATATTCACATTCAAA+TGG - chr7_3:77025232-77025251 None:intergenic 20.0%
!!! TATATGTAAATTTTATGGTC+AGG + chr7_3:77025298-77025317 Msa1125520:intron 20.0%
!!! ATATGTAAATTTTATGGTCA+GGG + chr7_3:77025299-77025318 Msa1125520:intron 20.0%
!! AACACGATTTCAATTAAAAA+GGG - chr7_3:77023732-77023751 None:intergenic 20.0%
!! AAACACGATTTCAATTAAAA+AGG - chr7_3:77023733-77023752 None:intergenic 20.0%
!!! AAAAAAAAATGGCTCAATTT+TGG + chr7_3:77023872-77023891 Msa1125520:intron 20.0%
!!! TTTTGTTGTATAATTGAACT+GGG + chr7_3:77024044-77024063 Msa1125520:intron 20.0%
!!! TAATCACAATTTTGTAAGTT+TGG + chr7_3:77024600-77024619 Msa1125520:five_prime_UTR 20.0%
!!! CTTTTCAATATTCATGTATA+TGG + chr7_3:77024919-77024938 Msa1125520:intron 20.0%
!!! ATATCCATATTTTGATTGTT+TGG + chr7_3:77024960-77024979 Msa1125520:intron 20.0%
!! AAAGAATATTCACATTCAAA+TGG - chr7_3:77025232-77025251 None:intergenic 20.0%
!!! TATATGTAAATTTTATGGTC+AGG + chr7_3:77025298-77025317 Msa1125520:intron 20.0%
!!! ATATGTAAATTTTATGGTCA+GGG + chr7_3:77025299-77025318 Msa1125520:intron 20.0%
! TAAAATATAAAAATCTGGGC+TGG - chr7_3:77023480-77023499 None:intergenic 25.0%
!!! GTTTTGTTGTATAATTGAAC+TGG + chr7_3:77024043-77024062 Msa1125520:intron 25.0%
! TATACATAGTTGTATGATAC+TGG + chr7_3:77024335-77024354 Msa1125520:intron 25.0%
!!! CTTTTTCGTGATATTTTGAA+TGG + chr7_3:77024388-77024407 Msa1125520:intron 25.0%
! TGAATATTGAAAAGTGATTG+TGG - chr7_3:77024913-77024932 None:intergenic 25.0%
!!! TTATGATGGATTGATGATAT+TGG + chr7_3:77024994-77025013 Msa1125520:intron 25.0%
! TTAGTCAATATGTATAAACC+TGG + chr7_3:77025268-77025287 Msa1125520:intron 25.0%
! AAAATAATATATCCTCCGTT+GGG - chr7_3:77025493-77025512 None:intergenic 25.0%
! TAAAATATAAAAATCTGGGC+TGG - chr7_3:77023480-77023499 None:intergenic 25.0%
!!! GTTTTGTTGTATAATTGAAC+TGG + chr7_3:77024043-77024062 Msa1125520:intron 25.0%
! TATACATAGTTGTATGATAC+TGG + chr7_3:77024335-77024354 Msa1125520:intron 25.0%
!!! CTTTTTCGTGATATTTTGAA+TGG + chr7_3:77024388-77024407 Msa1125520:intron 25.0%
! TGAATATTGAAAAGTGATTG+TGG - chr7_3:77024913-77024932 None:intergenic 25.0%
!!! TTATGATGGATTGATGATAT+TGG + chr7_3:77024994-77025013 Msa1125520:intron 25.0%
! TTAGTCAATATGTATAAACC+TGG + chr7_3:77025268-77025287 Msa1125520:intron 25.0%
! AAAATAATATATCCTCCGTT+GGG - chr7_3:77025493-77025512 None:intergenic 25.0%
CGATTTCAATTAAAAAGGGA+AGG - chr7_3:77023728-77023747 None:intergenic 30.0%
! CGGTTTTACAAATTACATTG+CGG + chr7_3:77024235-77024254 Msa1125520:intron 30.0%
TGTCATCTTTCAAATGCAAT+TGG - chr7_3:77024480-77024499 None:intergenic 30.0%
! TCACAATTTTGTAAGTTTGG+AGG + chr7_3:77024603-77024622 Msa1125520:five_prime_UTR 30.0%
ATTGAAAGAAGTTCAGAAAC+TGG + chr7_3:77024721-77024740 Msa1125520:CDS 30.0%
GACACCAAACAATCAAAATA+TGG - chr7_3:77024967-77024986 None:intergenic 30.0%
! TGGTGTCAATTTCATTATGA+TGG + chr7_3:77024980-77024999 Msa1125520:intron 30.0%
ATTTACATATATGTCAGACC+AGG - chr7_3:77025289-77025308 None:intergenic 30.0%
AGATAAGTCTGTTTGGATAT+GGG + chr7_3:77025388-77025407 Msa1125520:CDS 30.0%
GAAAATAATATATCCTCCGT+TGG - chr7_3:77025494-77025513 None:intergenic 30.0%
! TAAGTTTAATTTCCGTTCCT+AGG + chr7_3:77025571-77025590 Msa1125520:CDS 30.0%
CGATTTCAATTAAAAAGGGA+AGG - chr7_3:77023728-77023747 None:intergenic 30.0%
! CGGTTTTACAAATTACATTG+CGG + chr7_3:77024235-77024254 Msa1125520:intron 30.0%
TGTCATCTTTCAAATGCAAT+TGG - chr7_3:77024480-77024499 None:intergenic 30.0%
! TCACAATTTTGTAAGTTTGG+AGG + chr7_3:77024603-77024622 Msa1125520:five_prime_UTR 30.0%
ATTGAAAGAAGTTCAGAAAC+TGG + chr7_3:77024721-77024740 Msa1125520:CDS 30.0%
GACACCAAACAATCAAAATA+TGG - chr7_3:77024967-77024986 None:intergenic 30.0%
! TGGTGTCAATTTCATTATGA+TGG + chr7_3:77024980-77024999 Msa1125520:intron 30.0%
ATTTACATATATGTCAGACC+AGG - chr7_3:77025289-77025308 None:intergenic 30.0%
AGATAAGTCTGTTTGGATAT+GGG + chr7_3:77025388-77025407 Msa1125520:CDS 30.0%
GAAAATAATATATCCTCCGT+TGG - chr7_3:77025494-77025513 None:intergenic 30.0%
! GATTTTACCAAACACGATAC+AGG + chr7_3:77023552-77023571 Msa1125520:five_prime_UTR 35.0%
AAACTGACCTTAAACAGAGA+TGG - chr7_3:77023685-77023704 None:intergenic 35.0%
TCAGCGTAATCAACTTCAAT+CGG - chr7_3:77023809-77023828 None:intergenic 35.0%
!!! TTTTCTAGCTAGCTCTCATT+AGG - chr7_3:77023842-77023861 None:intergenic 35.0%
TAGAGATAGAGCTTGTAGTA+GGG + chr7_3:77024093-77024112 Msa1125520:intron 35.0%
! CAAAGACTGACTTTGAAAAC+TGG + chr7_3:77024123-77024142 Msa1125520:intron 35.0%
!!! CATTTTTGAGTGAGACTAGT+TGG + chr7_3:77024297-77024316 Msa1125520:intron 35.0%
TTGGACTCAAAATATCACTG+AGG - chr7_3:77024560-77024579 None:intergenic 35.0%
!! TCAGTGATATTTTGAGTCCA+AGG + chr7_3:77024559-77024578 Msa1125520:intron 35.0%
AGTGAAATCAATGGAGAGAT+TGG + chr7_3:77024697-77024716 Msa1125520:exon 35.0%
AAAGAAGTTCAGAAACTGGA+AGG + chr7_3:77024725-77024744 Msa1125520:CDS 35.0%
CGATAAAACTGTTCGAATCT+GGG + chr7_3:77024832-77024851 Msa1125520:CDS 35.0%
TGGAGTTCAAAATGAAATGC+AGG + chr7_3:77025014-77025033 Msa1125520:intron 35.0%
ATTTGAGTGTGTCTCTACTT+TGG + chr7_3:77025158-77025177 Msa1125520:CDS 35.0%
GAAAGACTATATTCACAGCA+TGG - chr7_3:77025197-77025216 None:intergenic 35.0%
GTAGTAGAGATAAGTCTGTT+TGG + chr7_3:77025381-77025400 Msa1125520:CDS 35.0%
GAGATAAGTCTGTTTGGATA+TGG + chr7_3:77025387-77025406 Msa1125520:CDS 35.0%
CAATGAGTTTGAGTGTGTTT+CGG + chr7_3:77025424-77025443 Msa1125520:CDS 35.0%
! GATTTTACCAAACACGATAC+AGG + chr7_3:77023552-77023571 Msa1125520:five_prime_UTR 35.0%
AAACTGACCTTAAACAGAGA+TGG - chr7_3:77023685-77023704 None:intergenic 35.0%
TCAGCGTAATCAACTTCAAT+CGG - chr7_3:77023809-77023828 None:intergenic 35.0%
!!! TTTTCTAGCTAGCTCTCATT+AGG - chr7_3:77023842-77023861 None:intergenic 35.0%
TAGAGATAGAGCTTGTAGTA+GGG + chr7_3:77024093-77024112 Msa1125520:intron 35.0%
! CAAAGACTGACTTTGAAAAC+TGG + chr7_3:77024123-77024142 Msa1125520:intron 35.0%
!!! CATTTTTGAGTGAGACTAGT+TGG + chr7_3:77024297-77024316 Msa1125520:intron 35.0%
TTGGACTCAAAATATCACTG+AGG - chr7_3:77024560-77024579 None:intergenic 35.0%
!! TCAGTGATATTTTGAGTCCA+AGG + chr7_3:77024559-77024578 Msa1125520:intron 35.0%
AGTGAAATCAATGGAGAGAT+TGG + chr7_3:77024697-77024716 Msa1125520:exon 35.0%
AAAGAAGTTCAGAAACTGGA+AGG + chr7_3:77024725-77024744 Msa1125520:CDS 35.0%
CGATAAAACTGTTCGAATCT+GGG + chr7_3:77024832-77024851 Msa1125520:CDS 35.0%
TGGAGTTCAAAATGAAATGC+AGG + chr7_3:77025014-77025033 Msa1125520:intron 35.0%
ATTTGAGTGTGTCTCTACTT+TGG + chr7_3:77025158-77025177 Msa1125520:CDS 35.0%
GAAAGACTATATTCACAGCA+TGG - chr7_3:77025197-77025216 None:intergenic 35.0%
GTAGTAGAGATAAGTCTGTT+TGG + chr7_3:77025381-77025400 Msa1125520:CDS 35.0%
GAGATAAGTCTGTTTGGATA+TGG + chr7_3:77025387-77025406 Msa1125520:CDS 35.0%
CAATGAGTTTGAGTGTGTTT+CGG + chr7_3:77025424-77025443 Msa1125520:CDS 35.0%
CTACTACAAGCTCTATCTCT+AGG - chr7_3:77024094-77024113 None:intergenic 40.0%
CTAGAGATAGAGCTTGTAGT+AGG + chr7_3:77024092-77024111 Msa1125520:intron 40.0%
! CATTCGAAAACGAGCTTTGT+AGG - chr7_3:77024454-77024473 None:intergenic 40.0%
! CTACAAAGCTCGTTTTCGAA+TGG + chr7_3:77024452-77024471 Msa1125520:intron 40.0%
ATTGTGATTACCCACTGTCA+GGG - chr7_3:77024590-77024609 None:intergenic 40.0%
AATTGTGATTACCCACTGTC+AGG - chr7_3:77024591-77024610 None:intergenic 40.0%
CTTCTTCAGTCTACAAGCTA+TGG - chr7_3:77024658-77024677 None:intergenic 40.0%
CTTGTAGACTGAAGAAGACA+CGG + chr7_3:77024661-77024680 Msa1125520:five_prime_UTR 40.0%
ATCCAAACTCCAAACCCTAT+CGG - chr7_3:77024756-77024775 None:intergenic 40.0%
! ATAGGGTTTGGAGTTTGGAT+TGG + chr7_3:77024756-77024775 Msa1125520:CDS 40.0%
GCGATAAAACTGTTCGAATC+TGG + chr7_3:77024831-77024850 Msa1125520:CDS 40.0%
TTGTGGTAAGAAAGAGAGAG+AGG - chr7_3:77024896-77024915 None:intergenic 40.0%
! GTGGCTAACAATTTTCCAGA+CGG - chr7_3:77025090-77025109 None:intergenic 40.0%
! AACATTTTCCCATATGGCAG+TGG - chr7_3:77025130-77025149 None:intergenic 40.0%
ACTGCCATATGGGAAAATGT+TGG + chr7_3:77025129-77025148 Msa1125520:CDS 40.0%
CTGCCATATGGGAAAATGTT+GGG + chr7_3:77025130-77025149 Msa1125520:CDS 40.0%
TGCCATATGGGAAAATGTTG+GGG + chr7_3:77025131-77025150 Msa1125520:CDS 40.0%
! ATGAAGTCAAGAGTGTGTCT+TGG + chr7_3:77025330-77025349 Msa1125520:CDS 40.0%
ACATACCCAGGATGTGAAAA+TGG + chr7_3:77025457-77025476 Msa1125520:CDS 40.0%
GGTAATGCAAACGCTAGAAA+AGG + chr7_3:77025538-77025557 Msa1125520:CDS 40.0%
CTACTACAAGCTCTATCTCT+AGG - chr7_3:77024094-77024113 None:intergenic 40.0%
CTAGAGATAGAGCTTGTAGT+AGG + chr7_3:77024092-77024111 Msa1125520:intron 40.0%
! CATTCGAAAACGAGCTTTGT+AGG - chr7_3:77024454-77024473 None:intergenic 40.0%
! CTACAAAGCTCGTTTTCGAA+TGG + chr7_3:77024452-77024471 Msa1125520:intron 40.0%
ATTGTGATTACCCACTGTCA+GGG - chr7_3:77024590-77024609 None:intergenic 40.0%
AATTGTGATTACCCACTGTC+AGG - chr7_3:77024591-77024610 None:intergenic 40.0%
CTTCTTCAGTCTACAAGCTA+TGG - chr7_3:77024658-77024677 None:intergenic 40.0%
CTTGTAGACTGAAGAAGACA+CGG + chr7_3:77024661-77024680 Msa1125520:five_prime_UTR 40.0%
ATCCAAACTCCAAACCCTAT+CGG - chr7_3:77024756-77024775 None:intergenic 40.0%
! ATAGGGTTTGGAGTTTGGAT+TGG + chr7_3:77024756-77024775 Msa1125520:CDS 40.0%
GCGATAAAACTGTTCGAATC+TGG + chr7_3:77024831-77024850 Msa1125520:CDS 40.0%
TTGTGGTAAGAAAGAGAGAG+AGG - chr7_3:77024896-77024915 None:intergenic 40.0%
! GTGGCTAACAATTTTCCAGA+CGG - chr7_3:77025090-77025109 None:intergenic 40.0%
! AACATTTTCCCATATGGCAG+TGG - chr7_3:77025130-77025149 None:intergenic 40.0%
ACTGCCATATGGGAAAATGT+TGG + chr7_3:77025129-77025148 Msa1125520:CDS 40.0%
CTGCCATATGGGAAAATGTT+GGG + chr7_3:77025130-77025149 Msa1125520:CDS 40.0%
TGCCATATGGGAAAATGTTG+GGG + chr7_3:77025131-77025150 Msa1125520:CDS 40.0%
! ATGAAGTCAAGAGTGTGTCT+TGG + chr7_3:77025330-77025349 Msa1125520:CDS 40.0%
ACATACCCAGGATGTGAAAA+TGG + chr7_3:77025457-77025476 Msa1125520:CDS 40.0%
GGTAATGCAAACGCTAGAAA+AGG + chr7_3:77025538-77025557 Msa1125520:CDS 40.0%
!! AGGTTGGTATGGTTGGTGAA+CGG - chr7_3:77023647-77023666 None:intergenic 45.0%
CTGACCTTAAACAGAGATGG+TGG - chr7_3:77023682-77023701 None:intergenic 45.0%
! GAAAACGAGCTTTGTAGGTC+AGG - chr7_3:77024449-77024468 None:intergenic 45.0%
TTGTGATTACCCACTGTCAG+GGG - chr7_3:77024589-77024608 None:intergenic 45.0%
GGCTGTGCAAGTGAAATCAA+TGG + chr7_3:77024688-77024707 Msa1125520:exon 45.0%
AACTGGAAGGTCATACCGAT+AGG + chr7_3:77024738-77024757 Msa1125520:CDS 45.0%
ACTGGAAGGTCATACCGATA+GGG + chr7_3:77024739-77024758 Msa1125520:CDS 45.0%
AAGGTCATACCGATAGGGTT+TGG + chr7_3:77024744-77024763 Msa1125520:CDS 45.0%
! TACCGATAGGGTTTGGAGTT+TGG + chr7_3:77024751-77024770 Msa1125520:CDS 45.0%
AGGAGAAAAGGTTAGTGGAG+AGG - chr7_3:77024865-77024884 None:intergenic 45.0%
CTTGCAGGAGAAAAGGTTAG+TGG - chr7_3:77024870-77024889 None:intergenic 45.0%
! CACTAACCTTTTCTCCTGCA+AGG + chr7_3:77024868-77024887 Msa1125520:CDS 45.0%
AAATGAAATGCAGGCGACTC+TGG + chr7_3:77025023-77025042 Msa1125520:intron 45.0%
GAACTGTTCGATCTTGTGCT+TGG + chr7_3:77025061-77025080 Msa1125520:CDS 45.0%
! ATTTTCCCATATGGCAGTGG+TGG - chr7_3:77025127-77025146 None:intergenic 45.0%
GCCATATGGGAAAATGTTGG+GGG + chr7_3:77025132-77025151 Msa1125520:CDS 45.0%
! ACCCCCAACATTTTCCCATA+TGG - chr7_3:77025136-77025155 None:intergenic 45.0%
TGAGTGTGTCTCTACTTTGG+AGG + chr7_3:77025161-77025180 Msa1125520:CDS 45.0%
GAGTGTGTCTTGGAATGCAT+CGG + chr7_3:77025340-77025359 Msa1125520:CDS 45.0%
AGTGTGTCTTGGAATGCATC+GGG + chr7_3:77025341-77025360 Msa1125520:CDS 45.0%
ACACACTCAAACTCATTGCC+TGG - chr7_3:77025422-77025441 None:intergenic 45.0%
! CCTCACCATTTTCACATCCT+GGG - chr7_3:77025465-77025484 None:intergenic 45.0%
! ACCTCACCATTTTCACATCC+TGG - chr7_3:77025466-77025485 None:intergenic 45.0%
AGGATGTGAAAATGGTGAGG+TGG + chr7_3:77025465-77025484 Msa1125520:CDS 45.0%
!! AGGTTGGTATGGTTGGTGAA+CGG - chr7_3:77023647-77023666 None:intergenic 45.0%
CTGACCTTAAACAGAGATGG+TGG - chr7_3:77023682-77023701 None:intergenic 45.0%
! GAAAACGAGCTTTGTAGGTC+AGG - chr7_3:77024449-77024468 None:intergenic 45.0%
TTGTGATTACCCACTGTCAG+GGG - chr7_3:77024589-77024608 None:intergenic 45.0%
GGCTGTGCAAGTGAAATCAA+TGG + chr7_3:77024688-77024707 Msa1125520:exon 45.0%
AACTGGAAGGTCATACCGAT+AGG + chr7_3:77024738-77024757 Msa1125520:CDS 45.0%
ACTGGAAGGTCATACCGATA+GGG + chr7_3:77024739-77024758 Msa1125520:CDS 45.0%
AAGGTCATACCGATAGGGTT+TGG + chr7_3:77024744-77024763 Msa1125520:CDS 45.0%
! TACCGATAGGGTTTGGAGTT+TGG + chr7_3:77024751-77024770 Msa1125520:CDS 45.0%
AGGAGAAAAGGTTAGTGGAG+AGG - chr7_3:77024865-77024884 None:intergenic 45.0%
CTTGCAGGAGAAAAGGTTAG+TGG - chr7_3:77024870-77024889 None:intergenic 45.0%
! CACTAACCTTTTCTCCTGCA+AGG + chr7_3:77024868-77024887 Msa1125520:CDS 45.0%
AAATGAAATGCAGGCGACTC+TGG + chr7_3:77025023-77025042 Msa1125520:intron 45.0%
GAACTGTTCGATCTTGTGCT+TGG + chr7_3:77025061-77025080 Msa1125520:CDS 45.0%
! ATTTTCCCATATGGCAGTGG+TGG - chr7_3:77025127-77025146 None:intergenic 45.0%
GCCATATGGGAAAATGTTGG+GGG + chr7_3:77025132-77025151 Msa1125520:CDS 45.0%
! ACCCCCAACATTTTCCCATA+TGG - chr7_3:77025136-77025155 None:intergenic 45.0%
TGAGTGTGTCTCTACTTTGG+AGG + chr7_3:77025161-77025180 Msa1125520:CDS 45.0%
GAGTGTGTCTTGGAATGCAT+CGG + chr7_3:77025340-77025359 Msa1125520:CDS 45.0%
AGTGTGTCTTGGAATGCATC+GGG + chr7_3:77025341-77025360 Msa1125520:CDS 45.0%
ACACACTCAAACTCATTGCC+TGG - chr7_3:77025422-77025441 None:intergenic 45.0%
! CCTCACCATTTTCACATCCT+GGG - chr7_3:77025465-77025484 None:intergenic 45.0%
! ACCTCACCATTTTCACATCC+TGG - chr7_3:77025466-77025485 None:intergenic 45.0%
AGGATGTGAAAATGGTGAGG+TGG + chr7_3:77025465-77025484 Msa1125520:CDS 45.0%
!! AAAATAAAATATAAAAATCT+GGG - chr7_3:77023484-77023503 None:intergenic 5.0%
!! AAAAATAAAATATAAAAATC+TGG - chr7_3:77023485-77023504 None:intergenic 5.0%
!! AAAATAAAATATAAAAATCT+GGG - chr7_3:77023484-77023503 None:intergenic 5.0%
!! AAAAATAAAATATAAAAATC+TGG - chr7_3:77023485-77023504 None:intergenic 5.0%
CTGTGTGCCTGTATCGTGTT+TGG - chr7_3:77023562-77023581 None:intergenic 50.0%
!! TATGGTTGGTGAACGGTGGT+GGG - chr7_3:77023640-77023659 None:intergenic 50.0%
!! TTGGTATGGTTGGTGAACGG+TGG - chr7_3:77023644-77023663 None:intergenic 50.0%
CGCTCCACCATCTCTGTTTA+AGG + chr7_3:77023675-77023694 Msa1125520:five_prime_UTR 50.0%
GGAAGGAGAGATGATAGCAG+GGG - chr7_3:77023711-77023730 None:intergenic 50.0%
GGGAAGGAGAGATGATAGCA+GGG - chr7_3:77023712-77023731 None:intergenic 50.0%
AGGGAAGGAGAGATGATAGC+AGG - chr7_3:77023713-77023732 None:intergenic 50.0%
GACTGAAGAAGACACGGTTG+AGG + chr7_3:77024667-77024686 Msa1125520:five_prime_UTR 50.0%
! TTGGATTGGAACCCTGCTAC+CGG + chr7_3:77024770-77024789 Msa1125520:CDS 50.0%
CTGCAAGAAGCGAAGATGAG+GGG - chr7_3:77024809-77024828 None:intergenic 50.0%
GCTGCAAGAAGCGAAGATGA+GGG - chr7_3:77024810-77024829 None:intergenic 50.0%
CTCATCTTCGCTTCTTGCAG+CGG + chr7_3:77024809-77024828 Msa1125520:CDS 50.0%
! GAGGTACCTTGCAGGAGAAA+AGG - chr7_3:77024877-77024896 None:intergenic 50.0%
!! AAGAGAGAGAGGTACCTTGC+AGG - chr7_3:77024885-77024904 None:intergenic 50.0%
TTGATGCCACCACTGCCATA+TGG + chr7_3:77025118-77025137 Msa1125520:CDS 50.0%
TGATGCCACCACTGCCATAT+GGG + chr7_3:77025119-77025138 Msa1125520:CDS 50.0%
CCCAGGATGTGAAAATGGTG+AGG + chr7_3:77025462-77025481 Msa1125520:CDS 50.0%
CTGTGTGCCTGTATCGTGTT+TGG - chr7_3:77023562-77023581 None:intergenic 50.0%
!! TATGGTTGGTGAACGGTGGT+GGG - chr7_3:77023640-77023659 None:intergenic 50.0%
!! TTGGTATGGTTGGTGAACGG+TGG - chr7_3:77023644-77023663 None:intergenic 50.0%
CGCTCCACCATCTCTGTTTA+AGG + chr7_3:77023675-77023694 Msa1125520:five_prime_UTR 50.0%
GGAAGGAGAGATGATAGCAG+GGG - chr7_3:77023711-77023730 None:intergenic 50.0%
GGGAAGGAGAGATGATAGCA+GGG - chr7_3:77023712-77023731 None:intergenic 50.0%
AGGGAAGGAGAGATGATAGC+AGG - chr7_3:77023713-77023732 None:intergenic 50.0%
GACTGAAGAAGACACGGTTG+AGG + chr7_3:77024667-77024686 Msa1125520:five_prime_UTR 50.0%
! TTGGATTGGAACCCTGCTAC+CGG + chr7_3:77024770-77024789 Msa1125520:CDS 50.0%
CTGCAAGAAGCGAAGATGAG+GGG - chr7_3:77024809-77024828 None:intergenic 50.0%
GCTGCAAGAAGCGAAGATGA+GGG - chr7_3:77024810-77024829 None:intergenic 50.0%
CTCATCTTCGCTTCTTGCAG+CGG + chr7_3:77024809-77024828 Msa1125520:CDS 50.0%
! GAGGTACCTTGCAGGAGAAA+AGG - chr7_3:77024877-77024896 None:intergenic 50.0%
!! AAGAGAGAGAGGTACCTTGC+AGG - chr7_3:77024885-77024904 None:intergenic 50.0%
TTGATGCCACCACTGCCATA+TGG + chr7_3:77025118-77025137 Msa1125520:CDS 50.0%
TGATGCCACCACTGCCATAT+GGG + chr7_3:77025119-77025138 Msa1125520:CDS 50.0%
CCCAGGATGTGAAAATGGTG+AGG + chr7_3:77025462-77025481 Msa1125520:CDS 50.0%
GTCGGACTTGAACTAGAGCG+TGG + chr7_3:77023443-77023462 Msa1125520:five_prime_UTR 55.0%
!! GTATGGTTGGTGAACGGTGG+TGG - chr7_3:77023641-77023660 None:intergenic 55.0%
!! GCGACAGAGGTTGGTATGGT+TGG - chr7_3:77023654-77023673 None:intergenic 55.0%
AGGAGAGATGATAGCAGGGG+CGG - chr7_3:77023708-77023727 None:intergenic 55.0%
TGATTACCCACTGTCAGGGG+CGG - chr7_3:77024586-77024605 None:intergenic 55.0%
AGCGAAGATGAGGGGAACAC+CGG - chr7_3:77024801-77024820 None:intergenic 55.0%
CGCTGCAAGAAGCGAAGATG+AGG - chr7_3:77024811-77024830 None:intergenic 55.0%
TCTTGTGCTTGGTCACCGTC+TGG + chr7_3:77025072-77025091 Msa1125520:CDS 55.0%
GGTGGCATCAAAGCTTGCAG+TGG - chr7_3:77025109-77025128 None:intergenic 55.0%
! TGGATATGGGAAGTGCAGCC+AGG + chr7_3:77025401-77025420 Msa1125520:CDS 55.0%
GAGTGTGTTTCGGTCCTGCA+AGG + chr7_3:77025434-77025453 Msa1125520:CDS 55.0%
CATCCTGGGTATGTCCTTGC+AGG - chr7_3:77025451-77025470 None:intergenic 55.0%
AATGGTGAGGTGGCACCCAA+CGG + chr7_3:77025475-77025494 Msa1125520:CDS 55.0%
GTCGGACTTGAACTAGAGCG+TGG + chr7_3:77023443-77023462 Msa1125520:five_prime_UTR 55.0%
!! GTATGGTTGGTGAACGGTGG+TGG - chr7_3:77023641-77023660 None:intergenic 55.0%
!! GCGACAGAGGTTGGTATGGT+TGG - chr7_3:77023654-77023673 None:intergenic 55.0%
AGGAGAGATGATAGCAGGGG+CGG - chr7_3:77023708-77023727 None:intergenic 55.0%
TGATTACCCACTGTCAGGGG+CGG - chr7_3:77024586-77024605 None:intergenic 55.0%
AGCGAAGATGAGGGGAACAC+CGG - chr7_3:77024801-77024820 None:intergenic 55.0%
CGCTGCAAGAAGCGAAGATG+AGG - chr7_3:77024811-77024830 None:intergenic 55.0%
TCTTGTGCTTGGTCACCGTC+TGG + chr7_3:77025072-77025091 Msa1125520:CDS 55.0%
GGTGGCATCAAAGCTTGCAG+TGG - chr7_3:77025109-77025128 None:intergenic 55.0%
! TGGATATGGGAAGTGCAGCC+AGG + chr7_3:77025401-77025420 Msa1125520:CDS 55.0%
GAGTGTGTTTCGGTCCTGCA+AGG + chr7_3:77025434-77025453 Msa1125520:CDS 55.0%
CATCCTGGGTATGTCCTTGC+AGG - chr7_3:77025451-77025470 None:intergenic 55.0%
AATGGTGAGGTGGCACCCAA+CGG + chr7_3:77025475-77025494 Msa1125520:CDS 55.0%
!! GCGAGCGACAGAGGTTGGTA+TGG - chr7_3:77023658-77023677 None:intergenic 60.0%
AACCCTGCTACCGGTCATGC+CGG + chr7_3:77024779-77024798 Msa1125520:CDS 60.0%
GGTCCTGCAAGGACATACCC+AGG + chr7_3:77025445-77025464 Msa1125520:CDS 60.0%
!! GCGAGCGACAGAGGTTGGTA+TGG - chr7_3:77023658-77023677 None:intergenic 60.0%
AACCCTGCTACCGGTCATGC+CGG + chr7_3:77024779-77024798 Msa1125520:CDS 60.0%
GGTCCTGCAAGGACATACCC+AGG + chr7_3:77025445-77025464 Msa1125520:CDS 60.0%
AGTGCACTGTGCCCACCCAC+CGG + chr7_3:77023598-77023617 Msa1125520:five_prime_UTR 65.0%
!! GAACGGTGGTGGGCTGTCGT+CGG - chr7_3:77023630-77023649 None:intergenic 65.0%
GTGGAGCGAGCGACAGAGGT+TGG - chr7_3:77023663-77023682 None:intergenic 65.0%
!! GATGGTGGAGCGAGCGACAG+AGG - chr7_3:77023667-77023686 None:intergenic 65.0%
CAAGGTCCGCCCCTGACAGT+GGG + chr7_3:77024577-77024596 Msa1125520:five_prime_UTR 65.0%
CACCGGCATGACCGGTAGCA+GGG - chr7_3:77024784-77024803 None:intergenic 65.0%
ACACCGGCATGACCGGTAGC+AGG - chr7_3:77024785-77024804 None:intergenic 65.0%
GAGGGGAACACCGGCATGAC+CGG - chr7_3:77024792-77024811 None:intergenic 65.0%
AGTGCACTGTGCCCACCCAC+CGG + chr7_3:77023598-77023617 Msa1125520:five_prime_UTR 65.0%
!! GAACGGTGGTGGGCTGTCGT+CGG - chr7_3:77023630-77023649 None:intergenic 65.0%
GTGGAGCGAGCGACAGAGGT+TGG - chr7_3:77023663-77023682 None:intergenic 65.0%
!! GATGGTGGAGCGAGCGACAG+AGG - chr7_3:77023667-77023686 None:intergenic 65.0%
CAAGGTCCGCCCCTGACAGT+GGG + chr7_3:77024577-77024596 Msa1125520:five_prime_UTR 65.0%
CACCGGCATGACCGGTAGCA+GGG - chr7_3:77024784-77024803 None:intergenic 65.0%
ACACCGGCATGACCGGTAGC+AGG - chr7_3:77024785-77024804 None:intergenic 65.0%
GAGGGGAACACCGGCATGAC+CGG - chr7_3:77024792-77024811 None:intergenic 65.0%
! TGTCGTCGGTGGTGGCCGGT+GGG - chr7_3:77023616-77023635 None:intergenic 70.0%
!! TGGTGGGCTGTCGTCGGTGG+TGG - chr7_3:77023624-77023643 None:intergenic 70.0%
CCACTGTCAGGGGCGGACCT+TGG - chr7_3:77024579-77024598 None:intergenic 70.0%
CCAAGGTCCGCCCCTGACAG+TGG + chr7_3:77024576-77024595 Msa1125520:five_prime_UTR 70.0%
GGTGAGGTGGCACCCAACGG+AGG + chr7_3:77025478-77025497 Msa1125520:CDS 70.0%
! TGTCGTCGGTGGTGGCCGGT+GGG - chr7_3:77023616-77023635 None:intergenic 70.0%
!! TGGTGGGCTGTCGTCGGTGG+TGG - chr7_3:77023624-77023643 None:intergenic 70.0%
CCACTGTCAGGGGCGGACCT+TGG - chr7_3:77024579-77024598 None:intergenic 70.0%
CCAAGGTCCGCCCCTGACAG+TGG + chr7_3:77024576-77024595 Msa1125520:five_prime_UTR 70.0%
GGTGAGGTGGCACCCAACGG+AGG + chr7_3:77025478-77025497 Msa1125520:CDS 70.0%
! GTCGGTGGTGGCCGGTGGGT+GGG - chr7_3:77023612-77023631 None:intergenic 75.0%
! CTGTCGTCGGTGGTGGCCGG+TGG - chr7_3:77023617-77023636 None:intergenic 75.0%
! GGGCTGTCGTCGGTGGTGGC+CGG - chr7_3:77023620-77023639 None:intergenic 75.0%
!! CGGTGGTGGGCTGTCGTCGG+TGG - chr7_3:77023627-77023646 None:intergenic 75.0%
! GTCGGTGGTGGCCGGTGGGT+GGG - chr7_3:77023612-77023631 None:intergenic 75.0%
! CTGTCGTCGGTGGTGGCCGG+TGG - chr7_3:77023617-77023636 None:intergenic 75.0%
! GGGCTGTCGTCGGTGGTGGC+CGG - chr7_3:77023620-77023639 None:intergenic 75.0%
!! CGGTGGTGGGCTGTCGTCGG+TGG - chr7_3:77023627-77023646 None:intergenic 75.0%
!! CGTCGGTGGTGGCCGGTGGG+TGG - chr7_3:77023613-77023632 None:intergenic 80.0%
!! CGTCGGTGGTGGCCGGTGGG+TGG - chr7_3:77023613-77023632 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 77023443 77025592 77023443 ID=Msa1125520;Name=Msa1125520
chr7_3 mRNA 77023443 77025592 77023443 ID=Msa1125520-mRNA-1;Parent=Msa1125520;Name=Msa1125520-mRNA-1;_AED=0.27;_eAED=0.27;_QI=398|1|0.75|1|0.66|0.75|4|0|200
chr7_3 exon 77023443 77023696 77023443 ID=Msa1125520-mRNA-1:exon:21136;Parent=Msa1125520-mRNA-1
chr7_3 exon 77024563 77024889 77024563 ID=Msa1125520-mRNA-1:exon:21137;Parent=Msa1125520-mRNA-1
chr7_3 exon 77025036 77025182 77025036 ID=Msa1125520-mRNA-1:exon:21138;Parent=Msa1125520-mRNA-1
chr7_3 exon 77025320 77025592 77025320 ID=Msa1125520-mRNA-1:exon:21139;Parent=Msa1125520-mRNA-1
chr7_3 five_prime_UTR 77023443 77023696 77023443 ID=Msa1125520-mRNA-1:five_prime_utr;Parent=Msa1125520-mRNA-1
chr7_3 five_prime_UTR 77024563 77024706 77024563 ID=Msa1125520-mRNA-1:five_prime_utr;Parent=Msa1125520-mRNA-1
chr7_3 CDS 77024707 77024889 77024707 ID=Msa1125520-mRNA-1:cds;Parent=Msa1125520-mRNA-1
chr7_3 CDS 77025036 77025182 77025036 ID=Msa1125520-mRNA-1:cds;Parent=Msa1125520-mRNA-1
chr7_3 CDS 77025320 77025592 77025320 ID=Msa1125520-mRNA-1:cds;Parent=Msa1125520-mRNA-1
Gene Sequence

>Msa1125520

ATGGAGAGATTGGAATTGAAAGAAGTTCAGAAACTGGAAGGTCATACCGATAGGGTTTGGAGTTTGGATTGGAACCCTGCTACCGGTCATGCCGGTGTTCCCCTCATCTTCGCTTCTTGCAGCGGCGATAAAACTGTTCGAATCTGGGAACAAAACCTCTCCACTAACCTTTTCTCCTGCAAGGCGACTCTGGAAGAAACACACACTCGAACTGTTCGATCTTGTGCTTGGTCACCGTCTGGAAAATTGTTAGCCACTGCAAGCTTTGATGCCACCACTGCCATATGGGAAAATGTTGGGGGTGAATTTGAGTGTGTCTCTACTTTGGAGGGACATGAAAATGAAGTCAAGAGTGTGTCTTGGAATGCATCGGGAACTTTGCTTGCAACTTGTAGTAGAGATAAGTCTGTTTGGATATGGGAAGTGCAGCCAGGCAATGAGTTTGAGTGTGTTTCGGTCCTGCAAGGACATACCCAGGATGTGAAAATGGTGAGGTGGCACCCAACGGAGGATATATTATTTTCATGTAGCTATGATAATAATATTAAGGTAATGCAAACGCTAGAAAAGGCTTTTCTGTTTAAGTTTAATTTCCGTTCCTAG
Protein sequence

>Msa1125520

MERLELKEVQKLEGHTDRVWSLDWNPATGHAGVPLIFASCSGDKTVRIWEQNLSTNLFSCKATLEETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGEFECVSTLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEVQPGNEFECVSVLQGHTQDVKMVRWHPTEDILFSCSYDNNIKVMQTLEKAFLFKFNFRS*