AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1127710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127710 MtrunA17_Chr7g0270831 88.496 452 24 9 1 443 1 433 0.0 752
Msa1127710 MtrunA17_Chr4g0075201 42.022 445 190 14 31 412 39 478 6.79e-79 253
Msa1127710 MtrunA17_Chr2g0288871 41.561 474 174 15 33 412 67 531 9.32e-79 254
Msa1127710 MtrunA17_Chr3g0099641 38.903 401 181 11 63 410 55 444 9.67e-71 231
Msa1127710 MtrunA17_Chr2g0322391 56.332 229 81 6 200 412 332 557 1.05e-70 234
Msa1127710 MtrunA17_Chr2g0302391 43.874 253 104 7 187 420 182 415 1.24e-55 190
Msa1127710 MtrunA17_Chr4g0025051 61.184 152 58 1 202 352 320 471 2.03e-53 188
Msa1127710 MtrunA17_Chr4g0024391 46.383 235 99 5 202 414 214 443 2.57e-53 185
Msa1127710 MtrunA17_Chr4g0025061 55.357 168 72 2 188 352 329 496 8.00e-52 184
Msa1127710 MtrunA17_Chr7g0216891 36.546 249 99 2 102 291 45 293 3.41e-44 162
Msa1127710 MtrunA17_Chr4g0051181 40.476 252 113 4 199 413 225 476 4.41e-41 152
Msa1127710 MtrunA17_Chr4g0060271 55.280 161 58 2 191 337 229 389 3.09e-39 149
Msa1127710 MtrunA17_Chr1g0150271 35.266 207 89 7 95 287 6 181 8.08e-31 119
Msa1127710 MtrunA17_Chr2g0333851 29.467 319 156 11 95 407 54 309 8.62e-30 118
Msa1127710 MtrunA17_Chr4g0001361 29.430 316 158 9 101 407 51 310 7.77e-29 115
Msa1127710 MtrunA17_Chr1g0150281 27.273 341 175 8 72 410 6 275 1.35e-26 108
Msa1127710 MtrunA17_Chr5g0419241 83.333 48 8 0 200 247 60 107 5.89e-25 98.6
Msa1127710 MtrunA17_Chr5g0445311 47.959 98 46 2 189 282 332 428 8.53e-25 107
Msa1127710 MtrunA17_Chr3g0101131 51.807 83 39 1 197 279 395 476 1.09e-23 103
Msa1127710 MtrunA17_Chr3g0136961 53.425 73 34 0 202 274 123 195 2.55e-23 99.4
Msa1127710 MtrunA17_Chr7g0249311 40.000 145 76 5 161 297 328 469 2.66e-23 102
Msa1127710 MtrunA17_Chr7g0249311 50.000 60 28 2 218 277 180 237 9.25e-12 67.0
Msa1127710 MtrunA17_Chr7g0218081 47.115 104 50 2 190 289 379 481 2.72e-23 102
Msa1127710 MtrunA17_Chr7g0218081 51.667 60 27 2 218 277 229 286 3.94e-12 68.2
Msa1127710 MtrunA17_Chr7g0243891 44.068 118 55 2 162 279 329 435 2.95e-23 102
Msa1127710 MtrunA17_Chr3g0106491 53.247 77 35 1 201 277 349 424 8.29e-23 100
Msa1127710 MtrunA17_Chr3g0106491 50.000 62 29 2 218 279 199 258 1.46e-12 69.3
Msa1127710 MtrunA17_Chr1g0150801 52.703 74 34 1 202 275 87 159 1.02e-22 94.4
Msa1127710 MtrunA17_Chr7g0224801 46.988 83 43 1 206 288 82 163 1.18e-22 94.4
Msa1127710 MtrunA17_Chr3g0079691 50.602 83 40 1 200 282 478 559 1.92e-22 100
Msa1127710 MtrunA17_Chr3g0079691 52.459 61 27 2 218 278 281 339 1.52e-13 72.8
Msa1127710 MtrunA17_Chr7g0270191 36.000 150 70 4 201 330 129 272 2.30e-22 96.7
Msa1127710 MtrunA17_Chr5g0418191 46.939 98 51 1 204 301 307 403 2.79e-22 98.6
Msa1127710 MtrunA17_Chr5g0418191 35.238 105 66 2 218 322 152 254 8.55e-13 69.7
Msa1127710 MtrunA17_Chr4g0004911 53.247 77 35 1 201 277 320 395 2.83e-22 99.0
Msa1127710 MtrunA17_Chr4g0004911 36.538 104 61 2 187 286 150 252 2.37e-15 78.2
Msa1127710 MtrunA17_Chr5g0447701 49.412 85 42 1 202 286 237 320 3.72e-22 97.8
Msa1127710 MtrunA17_Chr5g0447701 37.838 111 62 5 186 294 62 167 2.90e-12 68.2
Msa1127710 MtrunA17_Chr4g0042831 42.727 110 62 1 188 297 249 357 5.47e-22 97.4
Msa1127710 MtrunA17_Chr2g0294231 50.649 77 37 1 201 277 187 262 9.85e-22 96.3
Msa1127710 MtrunA17_Chr7g0249301 45.556 90 45 2 193 279 265 353 2.00e-21 95.5
Msa1127710 MtrunA17_Chr7g0249301 47.692 65 32 2 213 277 58 120 2.91e-12 67.8
Msa1127710 MtrunA17_Chr4g0051881 47.525 101 41 3 204 299 165 258 2.67e-21 94.4
Msa1127710 MtrunA17_Chr8g0386241 43.902 82 45 1 202 283 88 168 2.92e-21 90.9
Msa1127710 MtrunA17_Chr5g0432161 45.977 87 46 1 201 287 405 490 3.00e-21 96.3
Msa1127710 MtrunA17_Chr5g0432161 50.000 60 28 2 218 277 245 302 1.59e-12 69.3
Msa1127710 MtrunA17_Chr1g0194481 52.703 74 34 1 204 277 145 217 1.44e-20 92.0
Msa1127710 MtrunA17_Chr8g0383251 45.946 74 39 1 204 277 95 167 1.03e-19 86.7
Msa1127710 MtrunA17_Chr4g0068541 45.882 85 44 2 201 285 192 274 2.81e-19 89.7
Msa1127710 MtrunA17_Chr7g0263531 47.945 73 37 1 205 277 349 420 2.87e-19 89.7
Msa1127710 MtrunA17_Chr7g0263531 50.000 60 28 2 218 277 190 247 1.15e-11 66.2
Msa1127710 MtrunA17_Chr4g0074001 50.633 79 38 1 199 277 341 418 3.71e-19 89.7
Msa1127710 MtrunA17_Chr5g0418781 41.228 114 53 3 161 274 81 180 3.87e-19 87.0
Msa1127710 MtrunA17_Chr7g0270051 41.322 121 52 4 183 285 2 121 5.63e-19 86.7
Msa1127710 MtrunA17_Chr8g0379461 56.923 65 28 0 217 281 76 140 8.86e-19 85.5
Msa1127710 MtrunA17_Chr7g0248721 38.667 150 63 7 153 275 50 197 1.61e-18 84.0
Msa1127710 MtrunA17_Chr1g0147881 38.406 138 69 5 153 276 186 321 2.48e-18 85.9
Msa1127710 MtrunA17_Chr5g0443131 48.649 74 37 1 204 277 144 216 2.61e-18 85.5
Msa1127710 MtrunA17_Chr3g0129321 42.857 91 47 2 187 277 92 177 3.95e-18 82.8
Msa1127710 MtrunA17_Chr3g0129361 47.297 74 38 1 201 274 128 200 5.72e-18 82.4
Msa1127710 MtrunA17_Chr2g0284321 54.839 62 28 0 217 278 35 96 6.74e-18 82.4
Msa1127710 MtrunA17_Chr4g0053281 53.226 62 29 0 218 279 267 328 1.41e-17 83.6
Msa1127710 MtrunA17_Chr8g0348311 50.000 72 36 0 215 286 153 224 1.54e-17 83.6
Msa1127710 MtrunA17_Chr2g0319961 44.545 110 51 3 178 277 31 140 1.58e-17 82.0
Msa1127710 MtrunA17_Chr2g0293481 50.000 70 35 0 217 286 267 336 1.59e-17 84.7
Msa1127710 MtrunA17_Chr1g0184691 52.239 67 32 0 218 284 294 360 1.73e-17 83.6
Msa1127710 MtrunA17_Chr8g0335811 45.349 86 36 2 189 274 136 210 1.84e-17 81.3
Msa1127710 MtrunA17_Chr5g0401821 47.297 74 39 0 203 276 185 258 2.05e-17 82.0
Msa1127710 MtrunA17_Chr8g0383351 51.562 64 30 1 211 274 154 216 3.48e-17 80.5
Msa1127710 MtrunA17_Chr7g0248691 50.000 72 36 0 215 286 152 223 9.40e-17 80.9
Msa1127710 MtrunA17_Chr7g0228941 47.887 71 37 0 204 274 39 109 1.30e-16 75.9
Msa1127710 MtrunA17_Chr4g0071521 53.226 62 29 0 213 274 241 302 1.93e-16 80.1
Msa1127710 MtrunA17_Chr1g0188941 48.485 66 33 1 212 277 46 110 2.54e-16 74.7
Msa1127710 MtrunA17_Chr2g0289181 46.970 66 35 0 212 277 9 74 1.05e-15 76.3
Msa1127710 MtrunA17_Chr3g0139021 44.595 74 41 0 201 274 298 371 1.78e-15 77.8
Msa1127710 MtrunA17_Chr8g0387501 35.165 91 59 0 216 306 128 218 4.30e-15 75.5
Msa1127710 MtrunA17_Chr3g0126391 53.333 75 32 2 201 273 118 191 5.72e-15 75.9
Msa1127710 MtrunA17_Chr7g0238921 46.154 91 33 2 203 278 95 184 1.11e-14 74.7
Msa1127710 MtrunA17_Chr1g0202461 45.714 70 38 0 215 284 259 328 1.84e-14 74.7
Msa1127710 MtrunA17_Chr6g0485431 46.667 75 38 2 204 277 141 214 2.08e-14 74.3
Msa1127710 MtrunA17_Chr1g0189391 45.833 72 37 2 204 274 84 154 3.04e-14 73.6
Msa1127710 MtrunA17_Chr8g0347251 36.842 114 69 2 163 273 81 194 1.67e-13 71.6
Msa1127710 MtrunA17_Chr7g0244971 31.250 144 96 2 159 300 66 208 1.95e-13 70.9
Msa1127710 MtrunA17_Chr7g0244981 34.722 144 90 3 159 300 66 207 3.20e-13 70.1
Msa1127710 MtrunA17_Chr8g0387981 51.389 72 32 2 204 273 120 190 4.50e-13 70.5
Msa1127710 MtrunA17_Chr8g0334541 44.000 75 39 2 201 273 88 161 8.29e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127710 AT4G01720.1 41.833 502 201 13 11 443 10 489 9.98e-88 276
Msa1127710 AT4G04450.1 37.292 480 197 14 31 410 28 503 1.04e-75 246
Msa1127710 AT4G04450.2 40.704 398 156 9 92 410 13 409 6.90e-74 238
Msa1127710 AT1G62300.1 50.192 261 85 7 200 420 295 550 2.99e-64 216
Msa1127710 AT4G22070.4 70.922 141 39 1 200 338 280 420 3.51e-51 181
Msa1127710 AT4G22070.3 70.922 141 39 1 200 338 280 420 3.51e-51 181
Msa1127710 AT4G22070.2 70.922 141 39 1 200 338 280 420 3.51e-51 181
Msa1127710 AT4G22070.1 70.922 141 39 1 200 338 280 420 3.51e-51 181
Msa1127710 AT1G68150.1 41.071 224 102 5 101 298 97 316 9.92e-46 163
Msa1127710 AT5G15130.2 40.909 264 95 6 201 412 169 423 4.57e-45 164
Msa1127710 AT5G15130.1 40.909 264 95 6 201 412 211 465 5.89e-45 164
Msa1127710 AT1G18860.1 56.954 151 56 2 195 338 219 367 3.35e-40 151
Msa1127710 AT1G69810.2 50.932 161 70 5 181 339 111 264 2.75e-39 144
Msa1127710 AT1G69810.1 51.572 159 68 5 183 339 171 322 4.00e-39 145
Msa1127710 AT1G80840.1 29.107 347 183 12 72 413 9 297 2.04e-28 114
Msa1127710 AT4G31800.1 35.874 223 125 6 87 295 36 254 7.71e-28 112
Msa1127710 AT2G25000.1 32.547 212 113 5 78 282 23 211 7.86e-24 100
Msa1127710 AT4G26640.5 42.609 115 60 2 178 287 161 274 1.24e-23 102
Msa1127710 AT4G26640.5 37.736 106 63 3 208 313 26 128 5.68e-12 67.4
Msa1127710 AT4G26640.6 42.609 115 60 2 178 287 161 274 1.24e-23 102
Msa1127710 AT4G26640.6 37.736 106 63 3 208 313 26 128 5.68e-12 67.4
Msa1127710 AT4G26640.4 42.609 115 60 2 178 287 161 274 1.24e-23 102
Msa1127710 AT4G26640.4 37.736 106 63 3 208 313 26 128 5.68e-12 67.4
Msa1127710 AT4G26640.3 42.609 115 60 2 178 287 161 274 1.24e-23 102
Msa1127710 AT4G26640.3 37.736 106 63 3 208 313 26 128 5.68e-12 67.4
Msa1127710 AT4G26640.1 42.609 115 60 2 178 287 265 378 2.70e-23 102
Msa1127710 AT4G26640.1 37.736 106 63 3 208 313 130 232 7.97e-12 67.4
Msa1127710 AT2G25000.3 33.508 191 98 4 99 282 22 190 3.21e-23 98.6
Msa1127710 AT4G31800.2 50.000 80 40 0 216 295 110 189 3.46e-23 98.2
Msa1127710 AT4G26640.7 42.609 115 60 2 178 287 297 410 3.52e-23 102
Msa1127710 AT4G26640.7 37.736 106 63 3 208 313 162 264 9.42e-12 67.4
Msa1127710 AT4G26640.2 42.609 115 60 2 178 287 337 450 3.77e-23 102
Msa1127710 AT4G26640.2 37.736 106 63 3 208 313 202 304 1.01e-11 67.4
Msa1127710 AT2G25000.2 33.684 190 97 4 100 282 1 168 4.40e-23 97.8
Msa1127710 AT2G25000.4 33.684 190 97 4 100 282 1 168 4.40e-23 97.8
Msa1127710 AT4G18170.1 44.348 115 48 3 178 277 118 231 4.48e-23 99.8
Msa1127710 AT2G38470.1 50.633 79 38 1 201 279 346 423 9.55e-23 101
Msa1127710 AT2G38470.1 50.000 60 28 2 218 277 185 242 1.96e-12 69.3
Msa1127710 AT1G29860.1 42.241 116 54 4 201 316 120 222 1.43e-22 97.4
Msa1127710 AT5G26170.1 52.113 71 33 1 204 274 100 169 1.89e-22 94.4
Msa1127710 AT5G49520.1 50.649 77 37 1 201 277 205 280 3.18e-22 98.6
Msa1127710 AT2G04880.2 45.882 85 45 1 203 287 269 352 7.25e-22 98.2
Msa1127710 AT2G04880.2 39.175 97 51 3 215 305 109 203 6.16e-13 70.9
Msa1127710 AT1G13960.2 55.405 74 32 1 204 277 243 315 8.09e-22 96.7
Msa1127710 AT1G13960.2 43.820 89 42 4 207 290 61 146 4.91e-13 70.5
Msa1127710 AT2G04880.1 45.882 85 45 1 203 287 293 376 9.74e-22 97.8
Msa1127710 AT2G04880.1 45.070 71 37 2 215 285 109 177 2.44e-12 68.9
Msa1127710 AT1G13960.1 55.405 74 32 1 204 277 396 468 1.07e-21 97.8
Msa1127710 AT1G13960.1 43.820 89 42 4 207 290 214 299 4.10e-13 71.6
Msa1127710 AT5G56270.1 51.250 80 38 1 200 279 470 548 1.98e-21 97.8
Msa1127710 AT2G03340.1 51.899 79 37 1 204 282 402 479 2.52e-21 96.7
Msa1127710 AT2G03340.1 50.000 60 28 2 218 277 251 308 2.91e-12 68.9
Msa1127710 AT5G07100.2 51.948 77 36 1 201 277 125 200 2.57e-21 92.4
Msa1127710 AT5G07100.4 51.948 77 36 1 201 277 125 200 2.57e-21 92.4
Msa1127710 AT5G07100.5 51.948 77 36 1 201 277 125 200 2.57e-21 92.4
Msa1127710 AT5G07100.3 51.948 77 36 1 201 277 125 200 2.57e-21 92.4
Msa1127710 AT2G46130.1 46.237 93 39 2 183 275 6 87 3.12e-21 89.0
Msa1127710 AT5G07100.1 51.948 77 36 1 201 277 218 293 4.12e-21 94.0
Msa1127710 AT2G30250.1 50.633 79 38 1 201 279 312 389 1.53e-20 93.6
Msa1127710 AT5G41570.1 52.000 75 35 1 201 275 82 155 1.53e-20 89.0
Msa1127710 AT5G46350.1 51.351 74 35 1 204 277 170 242 1.60e-20 92.4
Msa1127710 AT1G64000.1 52.778 72 33 1 204 275 101 171 1.61e-20 89.7
Msa1127710 AT5G13080.1 52.055 73 34 1 204 276 54 125 1.72e-20 87.8
Msa1127710 AT4G30935.1 50.633 79 38 1 199 277 313 390 4.69e-20 92.8
Msa1127710 AT3G01080.1 51.351 74 35 1 204 277 293 365 7.62e-20 91.7
Msa1127710 AT3G01080.1 40.659 91 49 3 218 305 168 256 5.03e-12 67.8
Msa1127710 AT3G01080.2 51.351 74 35 1 204 277 331 403 8.77e-20 92.0
Msa1127710 AT3G01080.2 40.659 91 49 3 218 305 206 294 5.19e-12 68.2
Msa1127710 AT4G26440.1 49.367 79 39 1 201 279 356 433 1.24e-19 92.0
Msa1127710 AT4G26440.1 49.180 61 29 2 218 278 179 237 1.44e-11 67.0
Msa1127710 AT2G47260.1 44.898 98 49 2 201 294 158 254 1.30e-19 90.1
Msa1127710 AT1G55600.1 46.835 79 41 1 201 279 291 368 2.79e-19 90.5
Msa1127710 AT3G62340.1 53.247 77 35 1 201 277 102 177 3.62e-19 87.8
Msa1127710 AT1G69310.4 38.835 103 53 2 172 274 111 203 3.74e-19 87.8
Msa1127710 AT1G69310.2 38.835 103 53 2 172 274 111 203 3.74e-19 87.8
Msa1127710 AT1G69310.1 38.835 103 53 2 172 274 111 203 3.74e-19 87.8
Msa1127710 AT2G23320.1 47.619 84 36 1 201 276 216 299 4.54e-19 88.2
Msa1127710 AT1G29280.1 47.500 80 41 1 198 277 56 134 9.74e-19 85.9
Msa1127710 AT5G64810.1 47.887 71 36 1 204 274 97 166 1.00e-18 84.3
Msa1127710 AT2G30590.1 47.126 87 38 1 201 279 289 375 1.00e-18 87.8
Msa1127710 AT3G01970.1 52.113 71 33 1 204 274 52 121 1.17e-18 82.8
Msa1127710 AT5G28650.1 46.341 82 36 1 201 274 238 319 2.10e-18 86.3
Msa1127710 AT3G04670.1 45.122 82 37 1 201 274 238 319 9.29e-18 84.3
Msa1127710 AT4G24240.1 50.685 73 36 0 204 276 268 340 1.12e-17 84.7
Msa1127710 AT3G58710.1 49.383 81 38 1 208 288 62 139 1.18e-17 83.2
Msa1127710 AT3G58710.2 49.383 81 38 1 208 288 61 138 1.24e-17 83.2
Msa1127710 AT4G39410.1 47.297 74 38 1 201 274 207 279 1.38e-17 83.6
Msa1127710 AT5G52830.1 52.778 72 34 0 215 286 163 234 1.53e-17 84.0
Msa1127710 AT2G34830.1 45.679 81 43 1 205 284 202 282 2.10e-17 84.3
Msa1127710 AT2G34830.2 45.679 81 43 1 205 284 211 291 2.23e-17 84.3
Msa1127710 AT2G44745.1 44.186 86 37 2 189 274 127 201 2.45e-17 81.3
Msa1127710 AT1G30650.1 45.679 81 43 1 205 284 204 284 3.53e-17 84.0
Msa1127710 AT2G24570.1 57.895 57 24 0 218 274 244 300 6.43e-17 82.0
Msa1127710 AT4G31800.3 35.165 182 100 6 87 254 36 213 9.70e-17 79.7
Msa1127710 AT4G01250.1 48.611 72 37 0 215 286 126 197 1.21e-16 80.9
Msa1127710 AT2G37260.3 49.333 75 34 2 212 283 264 337 1.39e-16 81.3
Msa1127710 AT2G37260.3 41.935 93 43 4 195 282 67 153 4.23e-13 70.9
Msa1127710 AT2G37260.2 49.333 75 34 2 212 283 262 335 1.43e-16 81.3
Msa1127710 AT2G37260.2 41.935 93 43 4 195 282 65 151 4.21e-13 70.9
Msa1127710 AT4G31550.1 56.140 57 25 0 218 274 247 303 1.88e-16 80.5
Msa1127710 AT4G31550.2 56.140 57 25 0 218 274 246 302 2.00e-16 80.5
Msa1127710 AT4G23550.1 43.210 81 46 0 212 292 135 215 2.76e-16 79.7
Msa1127710 AT2G37260.1 49.333 75 34 2 212 283 344 417 2.77e-16 80.9
Msa1127710 AT2G37260.1 41.935 93 43 4 195 282 147 233 6.63e-13 70.5
Msa1127710 AT2G46130.2 43.011 93 38 3 183 275 6 83 2.93e-16 74.7
Msa1127710 AT5G45050.1 40.000 95 55 1 217 309 1180 1274 4.55e-15 78.6
Msa1127710 AT5G45050.2 40.000 95 55 1 217 309 1152 1246 4.94e-15 78.2
Msa1127710 AT5G45050.4 40.000 95 55 1 217 309 1041 1135 4.96e-15 78.2
Msa1127710 AT1G69310.3 35.922 103 52 3 172 274 111 199 2.99e-14 73.6
Msa1127710 AT2G21900.1 33.058 121 71 3 197 317 92 202 8.85e-14 70.5
Msa1127710 AT5G43290.1 31.159 138 75 5 152 274 38 170 2.90e-13 70.5
Msa1127710 AT5G45260.1 40.860 93 49 2 202 292 1197 1285 2.46e-12 69.7
Msa1127710 AT3G01080.3 40.659 91 49 3 218 305 206 294 3.18e-12 67.8
Msa1127710 AT2G46400.1 44.000 75 40 1 201 273 88 162 3.80e-12 67.4
Msa1127710 AT2G40740.1 46.667 75 35 2 218 287 174 248 5.96e-12 66.6
Msa1127710 AT2G40740.3 46.667 75 35 2 218 287 183 257 8.45e-12 66.2
Msa1127710 AT3G56400.1 34.821 112 70 2 165 273 67 178 6.81e-11 63.5

Find 110 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTAAAACGTTACGTTAAC+AGG 0.198700 7_3:+79355119 None:intergenic
GCCAAAGCTGTAGTAAAATT+TGG 0.236789 7_3:+79350066 None:intergenic
CATATATATAGTTATCTAAT+TGG 0.308263 7_3:+79349927 None:intergenic
GGATGTCAGTGGAGGAAATA+TGG 0.326047 7_3:-79351982 Msa1127710:CDS
GAATAATAATGCATTGGTTT+CGG 0.333185 7_3:-79352412 Msa1127710:CDS
ATGCAACATCCGCAACTACT+AGG 0.336584 7_3:-79350195 Msa1127710:CDS
GAGGAACTCTGGAGAGGTTA+TGG 0.338532 7_3:+79350232 None:intergenic
TTGTAGTTGGCTATAGCTTT+TGG 0.341519 7_3:+79354743 None:intergenic
TTTATTACCTGTTTGCGAAC+TGG 0.349172 7_3:+79351892 None:intergenic
GCAACCACCACCTTCATCTA+TGG 0.378686 7_3:-79350121 Msa1127710:CDS
GCAGTTGCAGCTGGTGGGAG+TGG 0.382339 7_3:+79350429 None:intergenic
TTGCGTGGGTTCTTCTAACT+TGG 0.393374 7_3:+79352332 None:intergenic
GGAAGGGTTGAGAAGCTGAT+AGG 0.399322 7_3:+79350283 None:intergenic
GAATCTTCTGCAGGATGATC+AGG 0.403070 7_3:+79352366 None:intergenic
GCAGCGATTTCATCAATCAT+TGG 0.419822 7_3:-79350042 Msa1127710:CDS
TTATTACCTGTTTGCGAACT+GGG 0.426338 7_3:+79351893 None:intergenic
AGATCCTCCGATCAAAGAAA+TGG 0.429845 7_3:-79355249 Msa1127710:CDS
AAAATTTGGATCCGAAGAAA+TGG 0.435237 7_3:+79350080 None:intergenic
TGTTAGTGCAGCCATTTCTT+CGG 0.448790 7_3:-79350091 Msa1127710:CDS
GATGGTAATAATAATCTTGC+AGG 0.450084 7_3:-79350003 Msa1127710:CDS
ATTCACAGTGGTGGTGGTGG+TGG 0.456766 7_3:+79355318 None:intergenic
TTTGCTATGGCAGTTGCAGC+TGG 0.458465 7_3:+79350420 None:intergenic
TTATCCTTCTTAAGCTCCTC+CGG 0.460563 7_3:-79355296 Msa1127710:CDS
CGATAGTAGGCACGAGGACA+AGG 0.465488 7_3:+79351937 None:intergenic
AGCTTCTGATCTTGCACGTA+TGG 0.466004 7_3:+79352278 None:intergenic
TGCCTACTATCGTTGCACTA+TGG 0.467155 7_3:-79351926 Msa1127710:CDS
CAGAATGTGGAAGAAAATCA+TGG 0.469000 7_3:-79352459 Msa1127710:CDS
AAGAAATCCATTTCTTTGAT+CGG 0.475782 7_3:+79355242 None:intergenic
CAGTTGCAGCTGGTGGGAGT+GGG 0.476377 7_3:+79350430 None:intergenic
TCTTGAAAATTCTGAAACTG+AGG 0.483824 7_3:-79354952 Msa1127710:intron
AGGATGCCCAGTTCGCAAAC+AGG 0.487149 7_3:-79351899 Msa1127710:intron
GAGAATGTAGTGCATGATTG+AGG 0.487594 7_3:+79349952 None:intergenic
TGCAACATCCGCAACTACTA+GGG 0.489367 7_3:-79350194 Msa1127710:CDS
TGCTGATATTGTGTTTGCTA+TGG 0.490920 7_3:+79350407 None:intergenic
CTTGCAGGTGTAGTTCCTGC+AGG 0.491341 7_3:-79349988 Msa1127710:CDS
CTGGTGGGAGTGGGTGAGTG+TGG 0.492649 7_3:+79350439 None:intergenic
AACCTCATCAACACTTAGAA+AGG 0.495655 7_3:-79350358 Msa1127710:CDS
GTACTTGACATTGTTGCATA+GGG 0.502525 7_3:+79350306 None:intergenic
AAATGGTAGAGGAGGAACTC+TGG 0.503668 7_3:+79350221 None:intergenic
GGTACTTGACATTGTTGCAT+AGG 0.510259 7_3:+79350305 None:intergenic
AGGATAATTCACAGTGGTGG+TGG 0.512011 7_3:+79355312 None:intergenic
GTCGAGGGTGATTGTTGGGA+AGG 0.512231 7_3:+79350266 None:intergenic
AATAATGCATTGGTTTCGGA+TGG 0.512362 7_3:-79352408 Msa1127710:CDS
ATTGGTTTCGGATGGAAAGC+AGG 0.513871 7_3:-79352400 Msa1127710:CDS
TGCGGATGTTGCATTTGAAA+TGG 0.519053 7_3:+79350204 None:intergenic
ATACACACCTGACCATGGTC+TGG 0.520004 7_3:+79354687 None:intergenic
AAATGAATTAGATAAATATC+CGG 0.520203 7_3:+79350329 None:intergenic
TGCAAGATCAGAAGCTCCCC+TGG 0.525707 7_3:-79352271 Msa1127710:intron
GCTATGGCAGTTGCAGCTGG+TGG 0.526091 7_3:+79350423 None:intergenic
TCAAGTCGAGGGTGATTGTT+GGG 0.528867 7_3:+79350262 None:intergenic
TACCACCATTACTTCAACTA+GGG 0.533321 7_3:-79350143 Msa1127710:CDS
CTACCACCATTACTTCAACT+AGG 0.538586 7_3:-79350144 Msa1127710:CDS
CATGGCAGCATCATCAAAGA+AGG 0.547257 7_3:-79355173 Msa1127710:CDS
GAAGGGTTGAGAAGCTGATA+GGG 0.548942 7_3:+79350284 None:intergenic
TTCTAACTTGGATGAGTGTG+AGG 0.554307 7_3:+79352344 None:intergenic
GTCAAGTCGAGGGTGATTGT+TGG 0.556628 7_3:+79350261 None:intergenic
CTATGGCAGTTGCAGCTGGT+GGG 0.556898 7_3:+79350424 None:intergenic
TGTTGCATTTGAAATGGTAG+AGG 0.559296 7_3:+79350210 None:intergenic
TTCCTTTCTAAGTGTTGATG+AGG 0.560288 7_3:+79350356 None:intergenic
GTCGCCGGAGGAGCTTAAGA+AGG 0.562473 7_3:+79355292 None:intergenic
AGCCATAGTGCAACGATAGT+AGG 0.563933 7_3:+79351924 None:intergenic
GGAAGCTGAGGTGAACCTGC+AGG 0.565063 7_3:+79349973 None:intergenic
TGCACAACTGAGCTTGTAGT+TGG 0.568244 7_3:+79354730 None:intergenic
ACACTTAGAAAGGAATCAGC+CGG 0.572173 7_3:-79350348 Msa1127710:CDS
AAATCCATTTCTTTGATCGG+AGG 0.572624 7_3:+79355245 None:intergenic
TGCATTTGAAATGGTAGAGG+AGG 0.573974 7_3:+79350213 None:intergenic
GAGGATCTATACTGTTGTTG+TGG 0.574005 7_3:+79355264 None:intergenic
ACACTCTCAACCATAGATGA+AGG 0.575020 7_3:+79350111 None:intergenic
ACGAGGACAAGGGTTACCCT+TGG 0.579166 7_3:+79351948 None:intergenic
ATAATTCACAGTGGTGGTGG+TGG 0.579236 7_3:+79355315 None:intergenic
TCGAGGGTGATTGTTGGGAA+GGG 0.581698 7_3:+79350267 None:intergenic
TCTGCAGGATGATCAGGAGG+AGG 0.584649 7_3:+79352372 None:intergenic
GAAAGGAATTAGGTCTTGCG+TGG 0.585330 7_3:+79352317 None:intergenic
GAGTGTGAGGAATCTTCTGC+AGG 0.593547 7_3:+79352357 None:intergenic
GGAGCACAAAGAGGTGGTGA+TGG 0.595155 7_3:-79350021 Msa1127710:CDS
AGAATGTGGAAGAAAATCAT+GGG 0.597126 7_3:-79352458 Msa1127710:CDS
GGATTAACCCCTAGTAGTTG+CGG 0.597913 7_3:+79350186 None:intergenic
TATCGTTGCACTATGGCTGT+AGG 0.598056 7_3:-79351919 Msa1127710:CDS
GGTTGCCCTAGTTGAAGTAA+TGG 0.602040 7_3:+79350138 None:intergenic
GTTGTTGTGGAAGAAGTCGC+CGG 0.606338 7_3:+79355277 None:intergenic
AGCTTCTGTGAGAAGAACAA+TGG 0.606352 7_3:+79350165 None:intergenic
TGTGGAAGAAAATCATGGGA+TGG 0.610182 7_3:-79352454 Msa1127710:CDS
ATCATTGGAGCACAAAGAGG+TGG 0.623691 7_3:-79350027 Msa1127710:CDS
AAAGGAATTAGGTCTTGCGT+GGG 0.624304 7_3:+79352318 None:intergenic
TCTTGCACGTATGGAAACCC+TGG 0.624694 7_3:+79352287 None:intergenic
TGCTGAGTGAGGAGTAGTGT+TGG 0.633875 7_3:+79355146 None:intergenic
TCAATCATTGGAGCACAAAG+AGG 0.634714 7_3:-79350030 Msa1127710:CDS
CTGCAGGATGATCAGGAGGA+GGG 0.634928 7_3:+79352373 None:intergenic
TAACAGGATCATGCTGAGTG+AGG 0.647028 7_3:+79355135 None:intergenic
TGCTTGAAAGTGAATTGAGG+AGG 0.651482 7_3:-79354812 Msa1127710:CDS
TCTTCTGCAGGATGATCAGG+AGG 0.653590 7_3:+79352369 None:intergenic
AGAAGGATAATTCACAGTGG+TGG 0.654696 7_3:+79355309 None:intergenic
CAAACATACACACCTGACCA+TGG 0.657184 7_3:+79354682 None:intergenic
TCAACCATAGATGAAGGTGG+TGG 0.660007 7_3:+79350117 None:intergenic
GCAACATCCGCAACTACTAG+GGG 0.665695 7_3:-79350193 Msa1127710:CDS
TGCCCTAGTTGAAGTAATGG+TGG 0.667028 7_3:+79350141 None:intergenic
AGATCAGCGATGGATGTCAG+TGG 0.669830 7_3:-79351993 Msa1127710:CDS
GATAGTAGGCACGAGGACAA+GGG 0.677877 7_3:+79351938 None:intergenic
TCAGCGATGGATGTCAGTGG+AGG 0.680116 7_3:-79351990 Msa1127710:CDS
GTAGAGGAGGAACTCTGGAG+AGG 0.684882 7_3:+79350226 None:intergenic
GTATGCTTGAAAGTGAATTG+AGG 0.687225 7_3:-79354815 Msa1127710:CDS
CTCTCAACCATAGATGAAGG+TGG 0.688697 7_3:+79350114 None:intergenic
ATACTAATAACAACATACGA+AGG 0.689011 7_3:-79350465 Msa1127710:CDS
GTGCATGATTGAGGAAGCTG+AGG 0.696083 7_3:+79349961 None:intergenic
GTTGTGGAAGAAGTCGCCGG+AGG 0.700435 7_3:+79355280 None:intergenic
GCTTGAAAGTGAATTGAGGA+GGG 0.713652 7_3:-79354811 Msa1127710:CDS
GAAGATGATCAAGATCAACA+TGG 0.728705 7_3:-79355191 Msa1127710:CDS
GTGCAACGATAGTAGGCACG+AGG 0.731065 7_3:+79351931 None:intergenic
AATGATTGATGAAATCGCTG+CGG 0.740375 7_3:+79350044 None:intergenic
TTAAGAAGGATAATTCACAG+TGG 0.816305 7_3:+79355306 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTAAGAAAGTTAAATTT+TGG + chr7_3:79350364-79350383 None:intergenic 10.0%
!!! TTCAAATATATATTTTTCTT+TGG - chr7_3:79351319-79351338 Msa1127710:intron 10.0%
!!! TCAAATATATATTTTTCTTT+GGG - chr7_3:79351320-79351339 Msa1127710:intron 10.0%
!!! TATATAAGAAAATATTTTCT+TGG - chr7_3:79351382-79351401 Msa1127710:intron 10.0%
!!! ACTTTTATTTAAAAAATTGA+CGG + chr7_3:79351738-79351757 None:intergenic 10.0%
!!! CTAATTAACTTTTTTTTTTA+AGG + chr7_3:79351941-79351960 None:intergenic 10.0%
!!! TAAAAAACAATTTCTTTTTA+AGG - chr7_3:79352431-79352450 Msa1127710:CDS 10.0%
!! GTTATATTTATATATATACT+TGG - chr7_3:79353104-79353123 Msa1127710:intron 10.0%
!!! AATTTTATTGAAAAATATGA+AGG + chr7_3:79354148-79354167 None:intergenic 10.0%
!!! AATATGAATTTTTATGTTTT+TGG - chr7_3:79354240-79354259 Msa1127710:intron 10.0%
!!! AATTAAGATAATATCTTTTA+GGG + chr7_3:79354486-79354505 None:intergenic 10.0%
!! TTTACTAGTATATATATATT+AGG + chr7_3:79354736-79354755 None:intergenic 10.0%
!!! TTTGAAGAACATATATATTT+TGG - chr7_3:79350388-79350407 Msa1127710:CDS 15.0%
!! GAAAATTAATAATCAAATGT+TGG + chr7_3:79350631-79350650 None:intergenic 15.0%
!! TAGAAAGAAAAAAAAATTGA+GGG + chr7_3:79351484-79351503 None:intergenic 15.0%
!! TTAGAAAGAAAAAAAAATTG+AGG + chr7_3:79351485-79351504 None:intergenic 15.0%
!! ACTATCTTTAATAAAATGTT+GGG + chr7_3:79351552-79351571 None:intergenic 15.0%
!! TACTATCTTTAATAAAATGT+TGG + chr7_3:79351553-79351572 None:intergenic 15.0%
!!! TATTTTAAACATATTATAGG+CGG + chr7_3:79351620-79351639 None:intergenic 15.0%
!!! TATGTTTAAAATAATACAGT+CGG - chr7_3:79351627-79351646 Msa1127710:intron 15.0%
!! ATAAAACAACTAGATATATA+AGG - chr7_3:79351651-79351670 Msa1127710:intron 15.0%
!!! CTTTTATTTAAAAAATTGAC+GGG + chr7_3:79351737-79351756 None:intergenic 15.0%
!!! TAATTAAAGATCATATTTTC+AGG - chr7_3:79351792-79351811 Msa1127710:intron 15.0%
!!! TACTCGTTAATTATATATTT+TGG + chr7_3:79351821-79351840 None:intergenic 15.0%
!! ATAAAATAGAAATACTAGAA+GGG + chr7_3:79352513-79352532 None:intergenic 15.0%
!! AATAAAATAGAAATACTAGA+AGG + chr7_3:79352514-79352533 None:intergenic 15.0%
!!! TAATTAGTGTAATTTAAAGT+AGG - chr7_3:79352637-79352656 Msa1127710:intron 15.0%
!!! TTTTTTGAATAATAATGCAT+TGG - chr7_3:79352853-79352872 Msa1127710:intron 15.0%
!! TTAATTAATATATAGTACCA+GGG + chr7_3:79353020-79353039 None:intergenic 15.0%
!! ATTAATTAATATATAGTACC+AGG + chr7_3:79353021-79353040 None:intergenic 15.0%
!! ATATAAATATAACTGTACAA+TGG + chr7_3:79353097-79353116 None:intergenic 15.0%
!!! TATATTTTACTAAAATTCAG+AGG + chr7_3:79353485-79353504 None:intergenic 15.0%
!!! ATTTTACCATAAATGATATT+GGG - chr7_3:79353512-79353531 Msa1127710:intron 15.0%
!!! GGATATACATATTTTATATA+GGG + chr7_3:79353579-79353598 None:intergenic 15.0%
!!! TTTTTTTTGATGTTTTGAAA+TGG - chr7_3:79353733-79353752 Msa1127710:intron 15.0%
!!! TCTAATATAAAACTTTAAGA+TGG + chr7_3:79353924-79353943 None:intergenic 15.0%
!! TATTACTCTTTATAAAAGAT+AGG - chr7_3:79353987-79354006 Msa1127710:intron 15.0%
!! ATTACTCTTTATAAAAGATA+GGG - chr7_3:79353988-79354007 Msa1127710:intron 15.0%
!!! TAATAACATTTTCTAGAAAT+GGG + chr7_3:79354343-79354362 None:intergenic 15.0%
!!! TTAATAACATTTTCTAGAAA+TGG + chr7_3:79354344-79354363 None:intergenic 15.0%
!!! GAATTAAGATAATATCTTTT+AGG + chr7_3:79354487-79354506 None:intergenic 15.0%
!! AAATGAATTAGATAAATATC+CGG + chr7_3:79354945-79354964 None:intergenic 15.0%
!!! TCTTCTTTGTTGTTTTTATT+AGG + chr7_3:79350065-79350084 None:intergenic 20.0%
!!! AATAATGATTTGTTTGTTTC+TGG - chr7_3:79350710-79350729 Msa1127710:intron 20.0%
!! CTCACAAAAATTTCTTAAAT+GGG + chr7_3:79350980-79350999 None:intergenic 20.0%
!! TCTCACAAAAATTTCTTAAA+TGG + chr7_3:79350981-79351000 None:intergenic 20.0%
!! ATCTATTCATTTCATTTCTT+TGG - chr7_3:79351211-79351230 Msa1127710:intron 20.0%
!!! ATTTTAAACATATTATAGGC+GGG + chr7_3:79351619-79351638 None:intergenic 20.0%
!!! TTCTTATTTAGTTGTTTTGT+TGG + chr7_3:79351906-79351925 None:intergenic 20.0%
!! AAAATTAGTGAAATGTTAAC+CGG - chr7_3:79352095-79352114 Msa1127710:intron 20.0%
!! ACAACAGATAAAATATTGTA+GGG + chr7_3:79352276-79352295 None:intergenic 20.0%
!! TACAACAGATAAAATATTGT+AGG + chr7_3:79352277-79352296 None:intergenic 20.0%
!! CATTTAATAGTTATGAACAA+AGG - chr7_3:79352775-79352794 Msa1127710:intron 20.0%
!! TAATTAATATATAGTACCAG+GGG + chr7_3:79353019-79353038 None:intergenic 20.0%
!!! ATTTATATATATACTTGGTG+AGG - chr7_3:79353109-79353128 Msa1127710:intron 20.0%
!! CAATATCATTTATGGTAAAA+TGG + chr7_3:79353513-79353532 None:intergenic 20.0%
!!! CATTTTACCATAAATGATAT+TGG - chr7_3:79353511-79353530 Msa1127710:intron 20.0%
!!! GGGATATACATATTTTATAT+AGG + chr7_3:79353580-79353599 None:intergenic 20.0%
!! AAAATATGTATATCCCAATT+TGG - chr7_3:79353584-79353603 Msa1127710:intron 20.0%
!! ACTCTTAAAATTACCAAATT+GGG + chr7_3:79353600-79353619 None:intergenic 20.0%
!! AACTCTTAAAATTACCAAAT+TGG + chr7_3:79353601-79353620 None:intergenic 20.0%
!! ATCAAATGTTGGTATATTTA+GGG + chr7_3:79354032-79354051 None:intergenic 20.0%
!! AATCAAATGTTGGTATATTT+AGG + chr7_3:79354033-79354052 None:intergenic 20.0%
!!! TCATAGATAGAAAATTTTAG+AGG + chr7_3:79354090-79354109 None:intergenic 20.0%
!!! CAATAAAATTTTCCAGAAAA+AGG - chr7_3:79354158-79354177 Msa1127710:intron 20.0%
!!! TTTAGGGTTAAATATGTAAA+TGG + chr7_3:79354470-79354489 None:intergenic 20.0%
!!! TAATTCTTTTATGTGAAACT+TGG - chr7_3:79354501-79354520 Msa1127710:intron 20.0%
!! ATAAAGTGTAGAACATATAT+TGG + chr7_3:79354634-79354653 None:intergenic 20.0%
! AAGAAATCCATTTCTTTGAT+CGG + chr7_3:79350032-79350051 None:intergenic 25.0%
!! ATTTAAAACGTTACGTTAAC+AGG + chr7_3:79350155-79350174 None:intergenic 25.0%
!!! TAATTTGTTTTCATACAGAC+TGG - chr7_3:79350251-79350270 Msa1127710:CDS 25.0%
!! AGTTATTGATAGTTGATTAG+TGG - chr7_3:79350952-79350971 Msa1127710:intron 25.0%
!! GTTATTGATAGTTGATTAGT+GGG - chr7_3:79350953-79350972 Msa1127710:intron 25.0%
! AGTCATCAATAAAGAAAACA+AGG - chr7_3:79351124-79351143 Msa1127710:intron 25.0%
! GTCATCAATAAAGAAAACAA+GGG - chr7_3:79351125-79351144 Msa1127710:intron 25.0%
! TATTGTCATTCCTAGTTTAA+AGG + chr7_3:79351583-79351602 None:intergenic 25.0%
!! TTTTAAACATATTATAGGCG+GGG + chr7_3:79351618-79351637 None:intergenic 25.0%
!! TGTCTCATTTTATAGTAGTT+CGG - chr7_3:79351689-79351708 Msa1127710:intron 25.0%
! CATGATAAATTACCCTTTAA+AGG + chr7_3:79352143-79352162 None:intergenic 25.0%
! TATTCTCCATATTCTAGTAT+GGG - chr7_3:79352311-79352330 Msa1127710:CDS 25.0%
!!! AGGCGGTTTTTAATTTTAAA+AGG + chr7_3:79352563-79352582 None:intergenic 25.0%
!!! TATAGATCGTTTTGTTGAAA+AGG + chr7_3:79352606-79352625 None:intergenic 25.0%
! ATGAACAAAGGTAATATTTG+TGG - chr7_3:79352787-79352806 Msa1127710:intron 25.0%
!!! GAATAATAATGCATTGGTTT+CGG - chr7_3:79352859-79352878 Msa1127710:intron 25.0%
!!! TGGTTTTTTTGAAAGGAATT+AGG + chr7_3:79352967-79352986 None:intergenic 25.0%
! TAATTCCTTTCAAAAAAACC+AGG - chr7_3:79352966-79352985 Msa1127710:intron 25.0%
! AATTCCTTTCAAAAAAACCA+GGG - chr7_3:79352967-79352986 Msa1127710:intron 25.0%
!!! TTTGGTAATTTTAAGAGTTG+TGG - chr7_3:79353602-79353621 Msa1127710:intron 25.0%
!! TTTTCTTCAAAAGACTGAAT+AGG - chr7_3:79353656-79353675 Msa1127710:intron 25.0%
! TTTCTTCAAAAGACTGAATA+GGG - chr7_3:79353657-79353676 Msa1127710:intron 25.0%
! TTATTAATTGAGTTCTGCAA+TGG - chr7_3:79353756-79353775 Msa1127710:intron 25.0%
! GATAGGGTTAAATAAGTAAA+TGG - chr7_3:79354004-79354023 Msa1127710:intron 25.0%
! TCAAATGTTGGTATATTTAG+GGG + chr7_3:79354031-79354050 None:intergenic 25.0%
!!! AGCCTAAGAAATATTTTAGT+GGG + chr7_3:79354061-79354080 None:intergenic 25.0%
!!! AAGCCTAAGAAATATTTTAG+TGG + chr7_3:79354062-79354081 None:intergenic 25.0%
!! CATAATATTCTACCTTTTTC+TGG + chr7_3:79354173-79354192 None:intergenic 25.0%
! ACATGAATTGACTAAAAACT+AGG - chr7_3:79354380-79354399 Msa1127710:intron 25.0%
! CATGAATTGACTAAAAACTA+GGG - chr7_3:79354381-79354400 Msa1127710:intron 25.0%
!!! TCATGAATGGAAATTTTTAG+TGG - chr7_3:79354411-79354430 Msa1127710:intron 25.0%
!!! CATGAATGGAAATTTTTAGT+GGG - chr7_3:79354412-79354431 Msa1127710:intron 25.0%
!! ATTTTTATCTATTGAGCTTG+TGG - chr7_3:79354524-79354543 Msa1127710:intron 25.0%
! TATACATATATTGCAACACA+TGG - chr7_3:79354681-79354700 Msa1127710:intron 25.0%
! ATACTAATAACAACATACGA+AGG - chr7_3:79354806-79354825 Msa1127710:CDS 25.0%
TTAAGAAGGATAATTCACAG+TGG + chr7_3:79349968-79349987 None:intergenic 30.0%
!! TCTTGAAAATTCTGAAACTG+AGG - chr7_3:79350319-79350338 Msa1127710:CDS 30.0%
!! GAAAGTTAAATTTTGGTCCA+TGG + chr7_3:79350357-79350376 None:intergenic 30.0%
! AAGAAATTTTTGTGAGATGC+TGG - chr7_3:79350984-79351003 Msa1127710:intron 30.0%
! AGAAATTTTTGTGAGATGCT+GGG - chr7_3:79350985-79351004 Msa1127710:intron 30.0%
!!! CCATTTTTGGGTTCTTAAAT+GGG + chr7_3:79351081-79351100 None:intergenic 30.0%
!!! TCCATTTTTGGGTTCTTAAA+TGG + chr7_3:79351082-79351101 None:intergenic 30.0%
CAAGGTTTCTAATTTAAGTG+AGG + chr7_3:79351158-79351177 None:intergenic 30.0%
CTCACTTAAATTAGAAACCT+TGG - chr7_3:79351156-79351175 Msa1127710:intron 30.0%
! GCTTATTCAAGATTTTGTTG+CGG + chr7_3:79351884-79351903 None:intergenic 30.0%
CTATTCTCCATATTCTAGTA+TGG - chr7_3:79352310-79352329 Msa1127710:CDS 30.0%
ACATTTCCCATACTAGAATA+TGG + chr7_3:79352320-79352339 None:intergenic 30.0%
CTGGTTAAGCATAACAAAAA+AGG + chr7_3:79352466-79352485 None:intergenic 30.0%
AATATTTGTGGAACAGAATG+TGG - chr7_3:79352799-79352818 Msa1127710:intron 30.0%
AGAATGTGGAAGAAAATCAT+GGG - chr7_3:79352813-79352832 Msa1127710:intron 30.0%
!!! GTTTTTTGAAGAGCTAATTG+TGG - chr7_3:79353155-79353174 Msa1127710:intron 30.0%
GAGGAAATATGGACAAAAAA+TGG - chr7_3:79353300-79353319 Msa1127710:intron 30.0%
CTTTACAAAACCATTTCGTA+AGG - chr7_3:79353954-79353973 Msa1127710:intron 30.0%
GTCCCACTAAAATATTTCTT+AGG - chr7_3:79354056-79354075 Msa1127710:intron 30.0%
GTGGGACTAAAATAAAATGT+TGG - chr7_3:79354430-79354449 Msa1127710:intron 30.0%
! TATATCTCACGATTTTACGT+GGG + chr7_3:79354665-79354684 None:intergenic 30.0%
ATATATTGCAACACATGGAT+CGG - chr7_3:79354686-79354705 Msa1127710:intron 30.0%
AAAATTTGGATCCGAAGAAA+TGG + chr7_3:79355194-79355213 None:intergenic 30.0%
! TCCAAATTTTACTACAGCTT+TGG - chr7_3:79355204-79355223 Msa1127710:CDS 30.0%
GATGGTAATAATAATCTTGC+AGG - chr7_3:79355268-79355287 Msa1127710:CDS 30.0%
AAATCCATTTCTTTGATCGG+AGG + chr7_3:79350029-79350048 None:intergenic 35.0%
GAAGATGATCAAGATCAACA+TGG - chr7_3:79350080-79350099 Msa1127710:CDS 35.0%
GTATGCTTGAAAGTGAATTG+AGG - chr7_3:79350456-79350475 Msa1127710:CDS 35.0%
! TTGTAGTTGGCTATAGCTTT+TGG + chr7_3:79350531-79350550 None:intergenic 35.0%
TGGAAAAGATTCTCCCTAAT+GGG + chr7_3:79350837-79350856 None:intergenic 35.0%
! ATTAGGGAGAATCTTTTCCA+GGG - chr7_3:79350837-79350856 Msa1127710:intron 35.0%
GGAGAGATTGAGTTCTTATT+AGG - chr7_3:79351010-79351029 Msa1127710:intron 35.0%
AAATAAGTGATGTGTACACG+TGG - chr7_3:79351053-79351072 Msa1127710:intron 35.0%
AATAAGTGATGTGTACACGT+GGG - chr7_3:79351054-79351073 Msa1127710:intron 35.0%
CCCATTTAAGAACCCAAAAA+TGG - chr7_3:79351078-79351097 Msa1127710:intron 35.0%
!! CAATGGAGACATCCATTTTT+GGG + chr7_3:79351093-79351112 None:intergenic 35.0%
! ACAATGGAGACATCCATTTT+TGG + chr7_3:79351094-79351113 None:intergenic 35.0%
AAAAATGGATGTCTCCATTG+TGG - chr7_3:79351093-79351112 Msa1127710:intron 35.0%
ATGACTAATAGCATCCACAA+TGG + chr7_3:79351110-79351129 None:intergenic 35.0%
AGTTTGAAAAAAGACAGCCA+AGG + chr7_3:79351176-79351195 None:intergenic 35.0%
ACGTTTCTTGACTATACTAG+TGG + chr7_3:79351243-79351262 None:intergenic 35.0%
GTAAGATCCACCTTTAAACT+AGG - chr7_3:79351570-79351589 Msa1127710:intron 35.0%
TGTCATTCCTAGTTTAAAGG+TGG + chr7_3:79351580-79351599 None:intergenic 35.0%
! TATAGTAGTTCGGTTCGAAT+CGG - chr7_3:79351699-79351718 Msa1127710:intron 35.0%
ATTTGACTCATAGAGTTGAG+AGG + chr7_3:79352039-79352058 None:intergenic 35.0%
ACACTAGTTAACGCCTTTAA+AGG - chr7_3:79352127-79352146 Msa1127710:intron 35.0%
CACTAGTTAACGCCTTTAAA+GGG - chr7_3:79352128-79352147 Msa1127710:intron 35.0%
!! GAATTCTTAAAAGAGTGTCC+CGG - chr7_3:79352232-79352251 Msa1127710:intron 35.0%
!! AATTCTTAAAAGAGTGTCCC+GGG - chr7_3:79352233-79352252 Msa1127710:intron 35.0%
CTAGTATGGGAAATGTTAAC+CGG - chr7_3:79352324-79352343 Msa1127710:CDS 35.0%
CAGAATGTGGAAGAAAATCA+TGG - chr7_3:79352812-79352831 Msa1127710:intron 35.0%
!! AATAATGCATTGGTTTCGGA+TGG - chr7_3:79352863-79352882 Msa1127710:intron 35.0%
!!! GAAACCCTGGTTTTTTTGAA+AGG + chr7_3:79352974-79352993 None:intergenic 35.0%
AATATGCACCAGAATAGCTT+AGG + chr7_3:79353135-79353154 None:intergenic 35.0%
!! TTTTGAAGAGCTAATTGTGG+TGG - chr7_3:79353158-79353177 Msa1127710:intron 35.0%
AATTTCCACATTCATGCATG+TGG + chr7_3:79353205-79353224 None:intergenic 35.0%
! TGATGATTTTAGATCAGCGA+TGG - chr7_3:79353268-79353287 Msa1127710:intron 35.0%
ATATGGACAAAAAATGGCCA+AGG - chr7_3:79353306-79353325 Msa1127710:intron 35.0%
TATGGACAAAAAATGGCCAA+GGG - chr7_3:79353307-79353326 Msa1127710:intron 35.0%
TTATTACCTGTTTGCGAACT+GGG + chr7_3:79353381-79353400 None:intergenic 35.0%
TTTATTACCTGTTTGCGAAC+TGG + chr7_3:79353382-79353401 None:intergenic 35.0%
GGTAGACCCAATATCATTTA+TGG + chr7_3:79353521-79353540 None:intergenic 35.0%
AATGATATTGGGTCTACCTT+TGG - chr7_3:79353523-79353542 Msa1127710:intron 35.0%
ATCTCGTAAGAATTGTCCAA+AGG + chr7_3:79353542-79353561 None:intergenic 35.0%
!! AACATAGTGATGGATTTGAG+GGG + chr7_3:79353854-79353873 None:intergenic 35.0%
!! CAACATAGTGATGGATTTGA+GGG + chr7_3:79353855-79353874 None:intergenic 35.0%
TGTTGGTGTGTGGATATAAA+CGG - chr7_3:79353870-79353889 Msa1127710:intron 35.0%
TGTGGATATAAACGGTATGT+AGG - chr7_3:79353878-79353897 Msa1127710:intron 35.0%
GTGGGACTAAAATCAAATGT+TGG + chr7_3:79354043-79354062 None:intergenic 35.0%
TATGAAGGTTAGACATGAGT+TGG + chr7_3:79354133-79354152 None:intergenic 35.0%
CTAGGGACTAATTTCATGAA+TGG - chr7_3:79354398-79354417 Msa1127710:intron 35.0%
! GTTTAGCTCAATTAGTGAGT+CGG + chr7_3:79354612-79354631 None:intergenic 35.0%
! GTATATCTCACGATTTTACG+TGG + chr7_3:79354666-79354685 None:intergenic 35.0%
! TGCTGATATTGTGTTTGCTA+TGG + chr7_3:79354867-79354886 None:intergenic 35.0%
AACCTCATCAACACTTAGAA+AGG - chr7_3:79354913-79354932 Msa1127710:intron 35.0%
!! TTCCTTTCTAAGTGTTGATG+AGG + chr7_3:79354918-79354937 None:intergenic 35.0%
GTACTTGACATTGTTGCATA+GGG + chr7_3:79354968-79354987 None:intergenic 35.0%
! TGTTGCATTTGAAATGGTAG+AGG + chr7_3:79355064-79355083 None:intergenic 35.0%
TACCACCATTACTTCAACTA+GGG - chr7_3:79355128-79355147 Msa1127710:intron 35.0%
GCCAAAGCTGTAGTAAAATT+TGG + chr7_3:79355208-79355227 None:intergenic 35.0%
AATGATTGATGAAATCGCTG+CGG + chr7_3:79355230-79355249 None:intergenic 35.0%
AGAAGGATAATTCACAGTGG+TGG + chr7_3:79349965-79349984 None:intergenic 40.0%
TTATCCTTCTTAAGCTCCTC+CGG - chr7_3:79349975-79349994 Msa1127710:CDS 40.0%
GAGGATCTATACTGTTGTTG+TGG + chr7_3:79350010-79350029 None:intergenic 40.0%
AGATCCTCCGATCAAAGAAA+TGG - chr7_3:79350022-79350041 Msa1127710:CDS 40.0%
TGAGGTTTGTGTATGTACCA+TGG - chr7_3:79350337-79350356 Msa1127710:CDS 40.0%
TGCTTGAAAGTGAATTGAGG+AGG - chr7_3:79350459-79350478 Msa1127710:CDS 40.0%
GCTTGAAAGTGAATTGAGGA+GGG - chr7_3:79350460-79350479 Msa1127710:CDS 40.0%
CAGAAACAAAAACCAGACCA+TGG - chr7_3:79350572-79350591 Msa1127710:intron 40.0%
ACTTCTTAGACCATCTCCAA+TGG - chr7_3:79350765-79350784 Msa1127710:intron 40.0%
CTTCTTAGACCATCTCCAAT+GGG - chr7_3:79350766-79350785 Msa1127710:intron 40.0%
! GGTCTTAACCATTTAAGACC+CGG - chr7_3:79350796-79350815 Msa1127710:intron 40.0%
!! AATAGGTACCGGGTCTTAAA+TGG + chr7_3:79350807-79350826 None:intergenic 40.0%
! TTTAAGACCCGGTACCTATT+AGG - chr7_3:79350807-79350826 Msa1127710:intron 40.0%
GAAAAGATTCTCCCTAATGG+GGG + chr7_3:79350835-79350854 None:intergenic 40.0%
GGAAAAGATTCTCCCTAATG+GGG + chr7_3:79350836-79350855 None:intergenic 40.0%
CTGGAAAAGATTCTCCCTAA+TGG + chr7_3:79350838-79350857 None:intergenic 40.0%
! CATTAGGGAGAATCTTTTCC+AGG - chr7_3:79350836-79350855 Msa1127710:intron 40.0%
!! TTAAGACCCCCACTTTTAAG+CGG - chr7_3:79350883-79350902 Msa1127710:intron 40.0%
! ATTTTTGTGAGATGCTGGGT+TGG - chr7_3:79350989-79351008 Msa1127710:intron 40.0%
TAGTTCCTTAACTAGTGCTG+CGG - chr7_3:79351508-79351527 Msa1127710:intron 40.0%
AAACATATTATAGGCGGGGT+AGG + chr7_3:79351614-79351633 None:intergenic 40.0%
!! AAAGGCGTTAACTAGTGTCT+GGG + chr7_3:79352125-79352144 None:intergenic 40.0%
!! TAAAGGCGTTAACTAGTGTC+TGG + chr7_3:79352126-79352145 None:intergenic 40.0%
!! ATTCTTAAAAGAGTGTCCCG+GGG - chr7_3:79352234-79352253 Msa1127710:intron 40.0%
TAGTATGTTTAACCAGTGCC+CGG + chr7_3:79352354-79352373 None:intergenic 40.0%
TTATGCTTAACCAGTGTCCA+GGG - chr7_3:79352472-79352491 Msa1127710:intron 40.0%
CATAATTTGAGCTGTGAAGG+CGG + chr7_3:79352580-79352599 None:intergenic 40.0%
TGCCATAATTTGAGCTGTGA+AGG + chr7_3:79352583-79352602 None:intergenic 40.0%
TGTGGAAGAAAATCATGGGA+TGG - chr7_3:79352817-79352836 Msa1127710:intron 40.0%
TTCTAACTTGGATGAGTGTG+AGG + chr7_3:79352930-79352949 None:intergenic 40.0%
AAAGGAATTAGGTCTTGCGT+GGG + chr7_3:79352956-79352975 None:intergenic 40.0%
! TGGTGGATATATAGCTAGCT+AGG - chr7_3:79353175-79353194 Msa1127710:intron 40.0%
!! CCAACATAGTGATGGATTTG+AGG + chr7_3:79353856-79353875 None:intergenic 40.0%
CCTCAAATCCATCACTATGT+TGG - chr7_3:79353853-79353872 Msa1127710:intron 40.0%
AACCATTTCGTAAGGTAGTG+AGG - chr7_3:79353962-79353981 Msa1127710:intron 40.0%
TTCCTCACTACCTTACGAAA+TGG + chr7_3:79353967-79353986 None:intergenic 40.0%
GTGCACTATGTTTCTTGAAC+AGG - chr7_3:79354757-79354776 Msa1127710:CDS 40.0%
ACACTTAGAAAGGAATCAGC+CGG - chr7_3:79354923-79354942 Msa1127710:intron 40.0%
GGTACTTGACATTGTTGCAT+AGG + chr7_3:79354969-79354988 None:intergenic 40.0%
!!! ATGGTTTTGTGTCAAGTCGA+GGG + chr7_3:79355023-79355042 None:intergenic 40.0%
!!! TATGGTTTTGTGTCAAGTCG+AGG + chr7_3:79355024-79355043 None:intergenic 40.0%
! TGCATTTGAAATGGTAGAGG+AGG + chr7_3:79355061-79355080 None:intergenic 40.0%
TGCGGATGTTGCATTTGAAA+TGG + chr7_3:79355070-79355089 None:intergenic 40.0%
AGCTTCTGTGAGAAGAACAA+TGG + chr7_3:79355109-79355128 None:intergenic 40.0%
CTACCACCATTACTTCAACT+AGG - chr7_3:79355127-79355146 Msa1127710:intron 40.0%
ACACTCTCAACCATAGATGA+AGG + chr7_3:79355163-79355182 None:intergenic 40.0%
TGTTAGTGCAGCCATTTCTT+CGG - chr7_3:79355180-79355199 Msa1127710:CDS 40.0%
GCAGCGATTTCATCAATCAT+TGG - chr7_3:79355229-79355248 Msa1127710:CDS 40.0%
TCAATCATTGGAGCACAAAG+AGG - chr7_3:79355241-79355260 Msa1127710:CDS 40.0%
GAGAATGTAGTGCATGATTG+AGG + chr7_3:79355322-79355341 None:intergenic 40.0%
!! ATAATTCACAGTGGTGGTGG+TGG + chr7_3:79349959-79349978 None:intergenic 45.0%
AGGATAATTCACAGTGGTGG+TGG + chr7_3:79349962-79349981 None:intergenic 45.0%
CATGGCAGCATCATCAAAGA+AGG - chr7_3:79350098-79350117 Msa1127710:CDS 45.0%
TAACAGGATCATGCTGAGTG+AGG + chr7_3:79350139-79350158 None:intergenic 45.0%
TGCACAACTGAGCTTGTAGT+TGG + chr7_3:79350544-79350563 None:intergenic 45.0%
ACAAAAACCAGACCATGGTC+AGG - chr7_3:79350577-79350596 Msa1127710:intron 45.0%
CAAACATACACACCTGACCA+TGG + chr7_3:79350592-79350611 None:intergenic 45.0%
TTAGACCATCTCCAATGGGA+TGG - chr7_3:79350770-79350789 Msa1127710:intron 45.0%
TAGACCATCTCCAATGGGAT+GGG - chr7_3:79350771-79350790 Msa1127710:intron 45.0%
ACCTATTAGGTACCCCCATT+AGG - chr7_3:79350820-79350839 Msa1127710:intron 45.0%
CCTATTAGGTACCCCCATTA+GGG - chr7_3:79350821-79350840 Msa1127710:intron 45.0%
! TTCCAGGGTCTTATAAGACC+CGG - chr7_3:79350852-79350871 Msa1127710:intron 45.0%
!! TAAGACCCCCACTTTTAAGC+GGG - chr7_3:79350884-79350903 Msa1127710:intron 45.0%
TGAGAGACCCGCTTAAAAGT+GGG + chr7_3:79350894-79350913 None:intergenic 45.0%
AATGTTAACCAGTACCCTCG+AGG - chr7_3:79351344-79351363 Msa1127710:intron 45.0%
TTCCTTAACCAATGCCTCGA+GGG + chr7_3:79351361-79351380 None:intergenic 45.0%
ATTCCTTAACCAATGCCTCG+AGG + chr7_3:79351362-79351381 None:intergenic 45.0%
AGTTCCTTAACTAGTGCTGC+GGG - chr7_3:79351509-79351528 Msa1127710:intron 45.0%
! TAGTTCGGTTCGAATCGGTT+CGG - chr7_3:79351704-79351723 Msa1127710:intron 45.0%
! AAGGCGTTAACTAGTGTCTG+GGG + chr7_3:79352124-79352143 None:intergenic 45.0%
!! TTCTTAAAAGAGTGTCCCGG+GGG - chr7_3:79352235-79352254 Msa1127710:intron 45.0%
AGTATGTTTAACCAGTGCCC+GGG + chr7_3:79352353-79352372 None:intergenic 45.0%
GTTATGCTTAACCAGTGTCC+AGG - chr7_3:79352471-79352490 Msa1127710:intron 45.0%
ACTAGAAGGGTGATGCTAAC+CGG + chr7_3:79352500-79352519 None:intergenic 45.0%
CGCCTTCACAGCTCAAATTA+TGG - chr7_3:79352578-79352597 Msa1127710:intron 45.0%
! ATTGGTTTCGGATGGAAAGC+AGG - chr7_3:79352871-79352890 Msa1127710:intron 45.0%
GAATCTTCTGCAGGATGATC+AGG + chr7_3:79352908-79352927 None:intergenic 45.0%
TTGCGTGGGTTCTTCTAACT+TGG + chr7_3:79352942-79352961 None:intergenic 45.0%
GAAAGGAATTAGGTCTTGCG+TGG + chr7_3:79352957-79352976 None:intergenic 45.0%
AGCTTCTGATCTTGCACGTA+TGG + chr7_3:79352996-79353015 None:intergenic 45.0%
GGATATATAGCTAGCTAGGC+CGG - chr7_3:79353179-79353198 Msa1127710:intron 45.0%
GGATGTCAGTGGAGGAAATA+TGG - chr7_3:79353289-79353308 Msa1127710:intron 45.0%
TGCCTACTATCGTTGCACTA+TGG - chr7_3:79353345-79353364 Msa1127710:intron 45.0%
AGCCATAGTGCAACGATAGT+AGG + chr7_3:79353350-79353369 None:intergenic 45.0%
TATCGTTGCACTATGGCTGT+AGG - chr7_3:79353352-79353371 Msa1127710:intron 45.0%
TCCATCACTATGTTGGTGTG+TGG - chr7_3:79353860-79353879 Msa1127710:intron 45.0%
TCCACACACCAACATAGTGA+TGG + chr7_3:79353864-79353883 None:intergenic 45.0%
TGGCATCAGAGCCTATCAAT+CGG + chr7_3:79353904-79353923 None:intergenic 45.0%
GAAGGGTTGAGAAGCTGATA+GGG + chr7_3:79354990-79355009 None:intergenic 45.0%
TCAAGTCGAGGGTGATTGTT+GGG + chr7_3:79355012-79355031 None:intergenic 45.0%
AAATGGTAGAGGAGGAACTC+TGG + chr7_3:79355053-79355072 None:intergenic 45.0%
ATGCAACATCCGCAACTACT+AGG - chr7_3:79355076-79355095 Msa1127710:intron 45.0%
TGCAACATCCGCAACTACTA+GGG - chr7_3:79355077-79355096 Msa1127710:intron 45.0%
GGATTAACCCCTAGTAGTTG+CGG + chr7_3:79355088-79355107 None:intergenic 45.0%
TGCCCTAGTTGAAGTAATGG+TGG + chr7_3:79355133-79355152 None:intergenic 45.0%
GGTTGCCCTAGTTGAAGTAA+TGG + chr7_3:79355136-79355155 None:intergenic 45.0%
TCAACCATAGATGAAGGTGG+TGG + chr7_3:79355157-79355176 None:intergenic 45.0%
CTCTCAACCATAGATGAAGG+TGG + chr7_3:79355160-79355179 None:intergenic 45.0%
ATCATTGGAGCACAAAGAGG+TGG - chr7_3:79355244-79355263 Msa1127710:CDS 45.0%
!!! TACATATTTAATTTATATTT+TGG - chr7_3:79350185-79350204 Msa1127710:CDS 5.0%
!!! ACATTTTTATTAATTTTTTT+AGG - chr7_3:79351273-79351292 Msa1127710:intron 5.0%
!!! CATTTTTATTAATTTTTTTA+GGG - chr7_3:79351274-79351293 Msa1127710:intron 5.0%
!!! ATTTTTATTAATTTTTTTAG+GGG - chr7_3:79351275-79351294 Msa1127710:intron 5.0%
!!! TATTATTTTAAACATATTAT+AGG + chr7_3:79351623-79351642 None:intergenic 5.0%
!!! TATAAAATAATTTTTTCTTT+TGG - chr7_3:79352210-79352229 Msa1127710:intron 5.0%
!!! TAAAAAATTCTAATTTTTTT+TGG + chr7_3:79354296-79354315 None:intergenic 5.0%
GTTGTTGTGGAAGAAGTCGC+CGG + chr7_3:79349997-79350016 None:intergenic 50.0%
TGCTGAGTGAGGAGTAGTGT+TGG + chr7_3:79350128-79350147 None:intergenic 50.0%
ATACACACCTGACCATGGTC+TGG + chr7_3:79350587-79350606 None:intergenic 50.0%
TTAAGACCCTCCCATCCCAT+TGG + chr7_3:79350784-79350803 None:intergenic 50.0%
!! TGGGGGTACCTAATAGGTAC+CGG + chr7_3:79350818-79350837 None:intergenic 50.0%
!! CCCTAATGGGGGTACCTAAT+AGG + chr7_3:79350824-79350843 None:intergenic 50.0%
! TCCAGGGTCTTATAAGACCC+GGG - chr7_3:79350853-79350872 Msa1127710:intron 50.0%
AGAGACCCGCTTAAAAGTGG+GGG + chr7_3:79350892-79350911 None:intergenic 50.0%
GAGAGACCCGCTTAAAAGTG+GGG + chr7_3:79350893-79350912 None:intergenic 50.0%
GTGAGAGACCCGCTTAAAAG+TGG + chr7_3:79350895-79350914 None:intergenic 50.0%
!! TACCCTCGAGGCATTGGTTA+AGG - chr7_3:79351356-79351375 Msa1127710:intron 50.0%
GTTCCTTAACTAGTGCTGCG+GGG - chr7_3:79351510-79351529 Msa1127710:intron 50.0%
TAACTAGTGTCTGGGGACAC+CGG + chr7_3:79352117-79352136 None:intergenic 50.0%
GTATGTTTAACCAGTGCCCG+GGG + chr7_3:79352352-79352371 None:intergenic 50.0%
TCTTCTGCAGGATGATCAGG+AGG + chr7_3:79352905-79352924 None:intergenic 50.0%
GAGTGTGAGGAATCTTCTGC+AGG + chr7_3:79352917-79352936 None:intergenic 50.0%
TCTTGCACGTATGGAAACCC+TGG + chr7_3:79352987-79353006 None:intergenic 50.0%
TGGTGAGGCCTAAGCTATTC+TGG - chr7_3:79353124-79353143 Msa1127710:intron 50.0%
TCCACATTCATGCATGTGGC+CGG + chr7_3:79353201-79353220 None:intergenic 50.0%
AGATCAGCGATGGATGTCAG+TGG - chr7_3:79353278-79353297 Msa1127710:intron 50.0%
GATAGTAGGCACGAGGACAA+GGG + chr7_3:79353336-79353355 None:intergenic 50.0%
CGGTATGTAGGCCGATTGAT+AGG - chr7_3:79353890-79353909 Msa1127710:intron 50.0%
! TTTGCTATGGCAGTTGCAGC+TGG + chr7_3:79354854-79354873 None:intergenic 50.0%
GGAAGGGTTGAGAAGCTGAT+AGG + chr7_3:79354991-79355010 None:intergenic 50.0%
TCGAGGGTGATTGTTGGGAA+GGG + chr7_3:79355007-79355026 None:intergenic 50.0%
GTCAAGTCGAGGGTGATTGT+TGG + chr7_3:79355013-79355032 None:intergenic 50.0%
! GAGGAACTCTGGAGAGGTTA+TGG + chr7_3:79355042-79355061 None:intergenic 50.0%
GCAACATCCGCAACTACTAG+GGG - chr7_3:79355078-79355097 Msa1127710:intron 50.0%
GCAACCACCACCTTCATCTA+TGG - chr7_3:79355150-79355169 Msa1127710:CDS 50.0%
GTGCATGATTGAGGAAGCTG+AGG + chr7_3:79355313-79355332 None:intergenic 50.0%
!! ATTCACAGTGGTGGTGGTGG+TGG + chr7_3:79349956-79349975 None:intergenic 55.0%
ACCATCTCCAATGGGATGGG+AGG - chr7_3:79350774-79350793 Msa1127710:intron 55.0%
CCATCTCCAATGGGATGGGA+GGG - chr7_3:79350775-79350794 Msa1127710:intron 55.0%
!! GGGGGTACCTAATAGGTACC+GGG + chr7_3:79350817-79350836 None:intergenic 55.0%
! CCAGGGTCTTATAAGACCCG+GGG - chr7_3:79350854-79350873 Msa1127710:intron 55.0%
GGGGTCTTAAGTAAGACCCC+GGG + chr7_3:79350873-79350892 None:intergenic 55.0%
GGGGGTCTTAAGTAAGACCC+CGG + chr7_3:79350874-79350893 None:intergenic 55.0%
AACCAGTACCCTCGAGGCAT+TGG - chr7_3:79351350-79351369 Msa1127710:intron 55.0%
! AACCAATGCCTCGAGGGTAC+TGG + chr7_3:79351355-79351374 None:intergenic 55.0%
TGTCCCCGCAGCACTAGTTA+AGG + chr7_3:79351516-79351535 None:intergenic 55.0%
AACTAGTGCTGCGGGGACAT+TGG - chr7_3:79351517-79351536 Msa1127710:intron 55.0%
TCTTGTTAACGAGTGCCCCC+GGG + chr7_3:79352253-79352272 None:intergenic 55.0%
! GTCTTGTTAACGAGTGCCCC+CGG + chr7_3:79352254-79352273 None:intergenic 55.0%
GGAAATGTTAACCGGTGCCC+CGG - chr7_3:79352332-79352351 Msa1127710:CDS 55.0%
GAAATGTTAACCGGTGCCCC+GGG - chr7_3:79352333-79352352 Msa1127710:CDS 55.0%
TTAACCAGTGTCCAGGGCAC+CGG - chr7_3:79352478-79352497 Msa1127710:intron 55.0%
CTGCAGGATGATCAGGAGGA+GGG + chr7_3:79352901-79352920 None:intergenic 55.0%
TCTGCAGGATGATCAGGAGG+AGG + chr7_3:79352902-79352921 None:intergenic 55.0%
TGCAAGATCAGAAGCTCCCC+TGG - chr7_3:79353000-79353019 Msa1127710:intron 55.0%
TCAGCGATGGATGTCAGTGG+AGG - chr7_3:79353281-79353300 Msa1127710:intron 55.0%
ACGAGGACAAGGGTTACCCT+TGG + chr7_3:79353326-79353345 None:intergenic 55.0%
CGATAGTAGGCACGAGGACA+AGG + chr7_3:79353337-79353356 None:intergenic 55.0%
GTGCAACGATAGTAGGCACG+AGG + chr7_3:79353343-79353362 None:intergenic 55.0%
AGGATGCCCAGTTCGCAAAC+AGG - chr7_3:79353372-79353391 Msa1127710:intron 55.0%
CTATGGCAGTTGCAGCTGGT+GGG + chr7_3:79354850-79354869 None:intergenic 55.0%
GTCGAGGGTGATTGTTGGGA+AGG + chr7_3:79355008-79355027 None:intergenic 55.0%
! GTAGAGGAGGAACTCTGGAG+AGG + chr7_3:79355048-79355067 None:intergenic 55.0%
GGAGCACAAAGAGGTGGTGA+TGG - chr7_3:79355250-79355269 Msa1127710:CDS 55.0%
CTTGCAGGTGTAGTTCCTGC+AGG - chr7_3:79355283-79355302 Msa1127710:CDS 55.0%
GTCGCCGGAGGAGCTTAAGA+AGG + chr7_3:79349982-79350001 None:intergenic 60.0%
GTTGTGGAAGAAGTCGCCGG+AGG + chr7_3:79349994-79350013 None:intergenic 60.0%
CCCTCCCATCCCATTGGAGA+TGG + chr7_3:79350778-79350797 None:intergenic 60.0%
! CCCCGGGTCTTATAAGACCC+TGG + chr7_3:79350857-79350876 None:intergenic 60.0%
GCCGGCCACATGCATGAATG+TGG - chr7_3:79353197-79353216 Msa1127710:intron 60.0%
CAGTTGCAGCTGGTGGGAGT+GGG + chr7_3:79354844-79354863 None:intergenic 60.0%
GCTATGGCAGTTGCAGCTGG+TGG + chr7_3:79354851-79354870 None:intergenic 60.0%
GGAAGCTGAGGTGAACCTGC+AGG + chr7_3:79355301-79355320 None:intergenic 60.0%
!! CACAGTGGTGGTGGTGGTGG+TGG + chr7_3:79349953-79349972 None:intergenic 65.0%
TTAACCAGTGCCCGGGGCAC+CGG + chr7_3:79352346-79352365 None:intergenic 65.0%
CTAACCGGTGCCCTGGACAC+TGG + chr7_3:79352485-79352504 None:intergenic 65.0%
GGTGATGCTAACCGGTGCCC+TGG + chr7_3:79352492-79352511 None:intergenic 65.0%
CTGGTGGGAGTGGGTGAGTG+TGG + chr7_3:79354835-79354854 None:intergenic 65.0%
GCAGTTGCAGCTGGTGGGAG+TGG + chr7_3:79354845-79354864 None:intergenic 65.0%
TTAACCGGTGCCCCGGGCAC+TGG - chr7_3:79352339-79352358 Msa1127710:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 79349942 79355351 79349942 ID=Msa1127710;Name=Msa1127710
chr7_3 mRNA 79349942 79355351 79349942 ID=Msa1127710-mRNA-1;Parent=Msa1127710;Name=Msa1127710-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.2|0|1|1|1|6|0|443
chr7_3 exon 79355133 79355351 79355133 ID=Msa1127710-mRNA-1:exon:22448;Parent=Msa1127710-mRNA-1
chr7_3 exon 79354953 79355024 79354953 ID=Msa1127710-mRNA-1:exon:22447;Parent=Msa1127710-mRNA-1
chr7_3 exon 79354695 79354841 79354695 ID=Msa1127710-mRNA-1:exon:22446;Parent=Msa1127710-mRNA-1
chr7_3 exon 79352272 79352478 79352272 ID=Msa1127710-mRNA-1:exon:22445;Parent=Msa1127710-mRNA-1
chr7_3 exon 79351900 79352013 79351900 ID=Msa1127710-mRNA-1:exon:22444;Parent=Msa1127710-mRNA-1
chr7_3 exon 79349942 79350514 79349942 ID=Msa1127710-mRNA-1:exon:22443;Parent=Msa1127710-mRNA-1
chr7_3 CDS 79355133 79355351 79355133 ID=Msa1127710-mRNA-1:cds;Parent=Msa1127710-mRNA-1
chr7_3 CDS 79354953 79355024 79354953 ID=Msa1127710-mRNA-1:cds;Parent=Msa1127710-mRNA-1
chr7_3 CDS 79354695 79354841 79354695 ID=Msa1127710-mRNA-1:cds;Parent=Msa1127710-mRNA-1
chr7_3 CDS 79352272 79352478 79352272 ID=Msa1127710-mRNA-1:cds;Parent=Msa1127710-mRNA-1
chr7_3 CDS 79351900 79352013 79351900 ID=Msa1127710-mRNA-1:cds;Parent=Msa1127710-mRNA-1
chr7_3 CDS 79349942 79350514 79349942 ID=Msa1127710-mRNA-1:cds;Parent=Msa1127710-mRNA-1
Gene Sequence

>Msa1127710

ATGGAAAACCACCACCACCACCACCACTGTGAATTATCCTTCTTAAGCTCCTCCGGCGACTTCTTCCACAACAACAGTATAGATCCTCCGATCAAAGAAATGGATTTCTTCTCATCATCACCTAATAAAAACAACAAAGAAGATGATCAAGATCAACATGGCAGCATCATCAAAGAAGGATCACCAACACTACTCCTCACTCAGCATGATCCTGTTAACACTGGACTGAATTTAACGTGTTCAAGTGCTGCAGTTTCAAAAGAAAAAAATCTTGAAAATTCTGAAACTGAGATGAGTATGCTTGAAAGTGAATTGAGGAGGGTGCAAGAAGAGAATCATAAATTGAGAATTATGTTAGAACAAATTACCAAAAGCTATAGCCAACTACAAGCTCAGTTGTGCATCACTTTGCAGAAACAAAAACCAGACCATGGTCAGAATGTGGAAGAAAATCATGGGATGGTATCAGAACAAATTTTTTTGAATAATAATGCATTGGTTTCGGATGGAAAGCAGGCTTGCCCTCCTCCTGATCATCCTGCAGAAGATTCCTCACACTCATCCAAGTTAGAAGAACCCACGCAAGACCTAATTCCTTTCAAAAAAACCAGGGTTTCCATACGTGCAAGATCAGAAGCTCCCCTGATCAGCGATGGATGTCAGTGGAGGAAATATGGACAAAAAATGGCCAAGGGTAACCCTTGTCCTCGTGCCTACTATCGTTGCACTATGGCTGTAGGATGCCCAGTTCGCAAACAGGTTCAAAGATGTGCAGAAGACAAGACAATACTAATAACAACATACGAAGGCAACCACACTCACCCACTCCCACCAGCTGCAACTGCCATAGCAAACACAATATCAGCAGCTGCAGCAATGCTGCTATCAACTTCAACCTCATCAACACTTAGAAAGGAATCAGCCGGATATTTATCTAATTCATTTCCCTATGCAACAATGTCAAGTACCCTATCAGCTTCTCAACCCTTCCCAACAATCACCCTCGACTTGACACAAAACCATAACCTCTCCAGAGTTCCTCCTCTACCATTTCAAATGCAACATCCGCAACTACTAGGGGTTAATCCATTGTTCTTCTCACAGAAGCTACCACCATTACTTCAACTAGGGCAACCACCACCTTCATCTATGGTTGAGAGTGTTAGTGCAGCCATTTCTTCGGATCCAAATTTTACTACAGCTTTGGCCGCAGCGATTTCATCAATCATTGGAGCACAAAGAGGTGGTGATGGTAATAATAATCTTGCAGGTGTAGTTCCTGCAGGTTCACCTCAGCTTCCTCAATCATGCACTACATTCTCTACCAATTAG
Protein sequence

>Msa1127710

MENHHHHHHCELSFLSSSGDFFHNNSIDPPIKEMDFFSSSPNKNNKEDDQDQHGSIIKEGSPTLLLTQHDPVNTGLNLTCSSAAVSKEKNLENSETEMSMLESELRRVQEENHKLRIMLEQITKSYSQLQAQLCITLQKQKPDHGQNVEENHGMVSEQIFLNNNALVSDGKQACPPPDHPAEDSSHSSKLEEPTQDLIPFKKTRVSIRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGNHTHPLPPAATAIANTISAAAAMLLSTSTSSTLRKESAGYLSNSFPYATMSSTLSASQPFPTITLDLTQNHNLSRVPPLPFQMQHPQLLGVNPLFFSQKLPPLLQLGQPPPSSMVESVSAAISSDPNFTTALAAAISSIIGAQRGGDGNNNLAGVVPAGSPQLPQSCTTFSTN*