Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1139820 | XP_013447726.1 | 99.301 | 715 | 5 | 0 | 1 | 715 | 1 | 715 | 0.0 | 1444 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1139820 | sp|Q9M1H3|AB4F_ARATH | 78.817 | 727 | 138 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1139820 | A0A072TXB0 | 99.301 | 715 | 5 | 0 | 1 | 715 | 1 | 715 | 0.0 | 1444 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0826510 | Msa1139820 | 0.803178 | 3.945403e-49 | -8.615850e-47 |
| Msa0865620 | Msa1139820 | 0.802288 | 6.023916e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1139820 | MtrunA17_Chr7g0220881 | 99.301 | 715 | 5 | 0 | 1 | 715 | 1 | 715 | 0.0 | 1444 |
| Msa1139820 | MtrunA17_Chr8g0371361 | 98.322 | 715 | 10 | 1 | 1 | 715 | 1 | 713 | 0.0 | 1429 |
| Msa1139820 | MtrunA17_Chr1g0181461 | 91.800 | 561 | 44 | 2 | 156 | 715 | 2 | 561 | 0.0 | 1060 |
| Msa1139820 | MtrunA17_Chr3g0119921 | 40.416 | 673 | 351 | 16 | 41 | 702 | 74 | 707 | 2.80e-156 | 469 |
| Msa1139820 | MtrunA17_Chr2g0327291 | 41.561 | 551 | 289 | 7 | 152 | 702 | 62 | 579 | 6.86e-151 | 451 |
| Msa1139820 | MtrunA17_Chr4g0028471 | 41.155 | 554 | 293 | 6 | 152 | 705 | 62 | 582 | 8.81e-147 | 441 |
| Msa1139820 | MtrunA17_Chr3g0129301 | 29.392 | 592 | 367 | 14 | 144 | 715 | 96 | 656 | 1.39e-62 | 222 |
| Msa1139820 | MtrunA17_Chr7g0264631 | 28.814 | 236 | 127 | 8 | 482 | 691 | 420 | 640 | 1.13e-13 | 75.1 |
| Msa1139820 | MtrunA17_Chr1g0180601 | 30.332 | 211 | 112 | 7 | 482 | 666 | 393 | 594 | 1.29e-13 | 75.1 |
| Msa1139820 | MtrunA17_Chr4g0069411 | 29.237 | 236 | 105 | 9 | 493 | 691 | 1055 | 1265 | 1.59e-13 | 74.7 |
| Msa1139820 | MtrunA17_Chr5g0410921 | 27.632 | 228 | 128 | 9 | 488 | 691 | 989 | 1203 | 1.09e-12 | 72.0 |
| Msa1139820 | MtrunA17_Chr8g0344651 | 27.232 | 224 | 134 | 7 | 488 | 691 | 598 | 812 | 1.18e-12 | 72.0 |
| Msa1139820 | MtrunA17_Chr6g0453051 | 31.441 | 229 | 118 | 10 | 488 | 691 | 1008 | 1222 | 1.49e-12 | 71.6 |
| Msa1139820 | MtrunA17_Chr7g0249091 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 3.45e-11 | 65.5 |
| Msa1139820 | MtrunA17_Chr7g0227391 | 33.714 | 175 | 98 | 7 | 488 | 646 | 425 | 597 | 9.33e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1139820 | AT3G54540.2 | 78.817 | 727 | 138 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1142 |
| Msa1139820 | AT3G54540.1 | 78.817 | 727 | 138 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1142 |
| Msa1139820 | AT1G64550.1 | 39.611 | 669 | 343 | 14 | 52 | 702 | 83 | 708 | 2.88e-155 | 467 |
| Msa1139820 | AT5G60790.1 | 41.622 | 555 | 289 | 7 | 152 | 705 | 67 | 587 | 7.44e-148 | 444 |
| Msa1139820 | AT5G64840.1 | 29.649 | 570 | 358 | 11 | 145 | 701 | 89 | 628 | 6.01e-66 | 231 |
| Msa1139820 | AT5G09930.1 | 30.648 | 571 | 353 | 14 | 144 | 701 | 74 | 614 | 6.05e-63 | 223 |
| Msa1139820 | AT3G28390.1 | 31.718 | 227 | 112 | 10 | 493 | 691 | 985 | 1196 | 1.15e-13 | 75.5 |
| Msa1139820 | AT3G28345.1 | 30.734 | 218 | 125 | 8 | 481 | 676 | 988 | 1201 | 3.23e-13 | 73.9 |
| Msa1139820 | AT2G36910.1 | 30.097 | 206 | 109 | 7 | 487 | 666 | 367 | 563 | 4.76e-13 | 73.6 |
| Msa1139820 | AT2G47000.6 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 5.43e-12 | 70.1 |
| Msa1139820 | AT2G47000.5 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 5.43e-12 | 70.1 |
| Msa1139820 | AT2G47000.1 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 5.43e-12 | 70.1 |
| Msa1139820 | AT1G67940.1 | 31.754 | 211 | 102 | 9 | 165 | 366 | 41 | 218 | 1.33e-11 | 66.2 |
| Msa1139820 | AT3G28860.1 | 31.222 | 221 | 121 | 9 | 492 | 691 | 1014 | 1224 | 2.09e-11 | 68.2 |
| Msa1139820 | AT3G28860.1 | 28.390 | 236 | 108 | 9 | 492 | 691 | 369 | 579 | 4.04e-11 | 67.4 |
| Msa1139820 | AT3G62150.3 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 2.17e-11 | 68.2 |
| Msa1139820 | AT3G62150.2 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 2.17e-11 | 68.2 |
| Msa1139820 | AT3G62150.1 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 2.17e-11 | 68.2 |
| Msa1139820 | AT1G70610.2 | 30.337 | 178 | 100 | 5 | 488 | 646 | 274 | 446 | 2.20e-11 | 67.4 |
| Msa1139820 | AT1G70610.1 | 31.792 | 173 | 104 | 4 | 488 | 646 | 455 | 627 | 2.31e-11 | 67.8 |
| Msa1139820 | AT4G01830.2 | 28.444 | 225 | 132 | 8 | 488 | 691 | 751 | 967 | 2.49e-11 | 67.8 |
| Msa1139820 | AT1G10680.1 | 26.754 | 228 | 130 | 9 | 488 | 691 | 982 | 1196 | 2.96e-11 | 67.8 |
| Msa1139820 | AT4G25960.1 | 28.431 | 204 | 113 | 8 | 488 | 666 | 1030 | 1225 | 3.57e-11 | 67.4 |
| Msa1139820 | AT1G65410.1 | 28.182 | 220 | 114 | 6 | 150 | 354 | 79 | 269 | 3.95e-11 | 65.9 |
| Msa1139820 | AT4G01830.1 | 28.444 | 225 | 132 | 8 | 488 | 691 | 985 | 1201 | 4.23e-11 | 67.0 |
| Msa1139820 | AT3G28380.1 | 28.571 | 217 | 117 | 8 | 488 | 676 | 995 | 1201 | 4.28e-11 | 67.0 |
| Msa1139820 | AT4G18050.1 | 28.070 | 228 | 118 | 8 | 493 | 691 | 998 | 1208 | 7.07e-11 | 66.6 |
| Msa1139820 | AT4G18050.2 | 28.070 | 228 | 118 | 8 | 493 | 691 | 1008 | 1218 | 8.20e-11 | 66.2 |
Find 167 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGCAAAACTTGGTAAATA+TGG | 0.195660 | 7_4:-10536398 | Msa1139820:CDS |
| CAGTGTATGCAGAAGCTTTC+GGG | 0.222983 | 7_4:+10538001 | None:intergenic |
| TAGCAAAGATGTTTCTAAAA+AGG | 0.272069 | 7_4:-10538118 | Msa1139820:CDS |
| TGTTGATGTTGGTATTGATA+TGG | 0.277196 | 7_4:-10536651 | Msa1139820:CDS |
| AGGCAAAGAAAGAAGCTCTT+AGG | 0.283965 | 7_4:-10537822 | Msa1139820:CDS |
| ATGAAGAACGGAGTCAAATA+TGG | 0.285206 | 7_4:-10536142 | Msa1139820:CDS |
| CTCTGCCATGTTGGCAGGTA+TGG | 0.307869 | 7_4:-10538082 | Msa1139820:CDS |
| AAAAGCTGATAAGCCTAAAA+AGG | 0.327285 | 7_4:-10538055 | Msa1139820:CDS |
| ACTTGTGTGGTACCTCTACT+TGG | 0.330518 | 7_4:+10536792 | None:intergenic |
| AGCTGCCCATGTGGCTGAAC+AGG | 0.335346 | 7_4:-10537842 | Msa1139820:CDS |
| TAAGAATATTGATGTCCTTC+TGG | 0.338734 | 7_4:-10537551 | Msa1139820:CDS |
| GTCTAAAATCCTCTCGGTTT+GGG | 0.344431 | 7_4:+10536681 | None:intergenic |
| GGAAAACGGTATGGTTTGAT+TGG | 0.355040 | 7_4:-10537637 | Msa1139820:CDS |
| ATCTTGTTGAGCCTTGTTCC+CGG | 0.359673 | 7_4:+10536901 | None:intergenic |
| GTTGCCATTGTTGGGCCTAA+TGG | 0.366354 | 7_4:-10536620 | Msa1139820:CDS |
| GTTGATGTTGGTATTGATAT+GGG | 0.367817 | 7_4:-10536650 | Msa1139820:CDS |
| GAATCTTCTAGCTGGTGATT+TGG | 0.379502 | 7_4:-10536576 | Msa1139820:CDS |
| TTGTAATCCTCAAATGTTCC+AGG | 0.380069 | 7_4:+10536089 | None:intergenic |
| TTGAAAGCAGCTAGAAGAAC+CGG | 0.393435 | 7_4:-10536920 | Msa1139820:CDS |
| GGGACTCGTGTTGCCATTGT+TGG | 0.395294 | 7_4:-10536629 | Msa1139820:CDS |
| TGCATATCCAAATGATTTGT+GGG | 0.395419 | 7_4:+10536260 | None:intergenic |
| AGATGAACCCACAAATCATT+TGG | 0.396989 | 7_4:-10536267 | Msa1139820:CDS |
| TCAGTGTATGCAGAAGCTTT+CGG | 0.398636 | 7_4:+10538000 | None:intergenic |
| GAGGGCTGTTCTGTGGTTAG+AGG | 0.402715 | 7_4:-10537140 | Msa1139820:CDS |
| CACTATTGAAGCTTCTTGCT+TGG | 0.403215 | 7_4:-10537591 | Msa1139820:CDS |
| CACCTCAAGTGGCTTCAAAT+CGG | 0.406400 | 7_4:+10537912 | None:intergenic |
| TCTGTCTCTGCCATGTTGGC+AGG | 0.407416 | 7_4:-10538087 | Msa1139820:CDS |
| GATCTACAAAATGCAGCTTC+TGG | 0.417738 | 7_4:-10537436 | Msa1139820:CDS |
| CCTGGTTTAACCTTTGTAGA+TGG | 0.419296 | 7_4:+10538141 | None:intergenic |
| CTTCGAACTTCACCTTCACT+TGG | 0.420634 | 7_4:+10536551 | None:intergenic |
| TTACTAAGCCCCTCCTGGTC+TGG | 0.421538 | 7_4:+10536434 | None:intergenic |
| TCTTTGCCTGTTCAGCCACA+TGG | 0.423166 | 7_4:+10537836 | None:intergenic |
| ACCTCAAGTGGCTTCAAATC+GGG | 0.424766 | 7_4:+10537913 | None:intergenic |
| AGTCTAAAATCCTCTCGGTT+TGG | 0.427353 | 7_4:+10536680 | None:intergenic |
| GAGATATTCCCAACACTTTG+TGG | 0.436079 | 7_4:-10536507 | Msa1139820:CDS |
| GAAGTCAGAAGTTGAGGATA+GGG | 0.442070 | 7_4:-10536529 | Msa1139820:CDS |
| TTGCATATCCAAATGATTTG+TGG | 0.442799 | 7_4:+10536259 | None:intergenic |
| AGCTAAGTTTGCAGCAGCTA+AGG | 0.445509 | 7_4:-10536864 | Msa1139820:CDS |
| CCTCCTGATAGTTTGACAAT+GGG | 0.445696 | 7_4:+10536350 | None:intergenic |
| GTGTTTCATCCATTGTTAGT+AGG | 0.453766 | 7_4:+10536483 | None:intergenic |
| AGAAGGACATCAATATTCTT+AGG | 0.458676 | 7_4:+10537553 | None:intergenic |
| CTTGCTTACTAAGCCCCTCC+TGG | 0.460120 | 7_4:+10536429 | None:intergenic |
| TGATGTCCTTCTGGTTGAGC+AGG | 0.464580 | 7_4:-10537542 | Msa1139820:CDS |
| GGTGTAAGTTCAGTAGGTTC+AGG | 0.465377 | 7_4:+10536740 | None:intergenic |
| AGTCGAGCTTCGGTGCTTGA+TGG | 0.465390 | 7_4:-10537766 | Msa1139820:CDS |
| AAATTTCCCTGGAACATTTG+AGG | 0.467370 | 7_4:-10536096 | Msa1139820:CDS |
| TTGATTGGGCCGAATGGAAT+GGG | 0.471197 | 7_4:-10537622 | Msa1139820:CDS |
| GTGCAAAACTTGGTAAATAT+GGG | 0.472556 | 7_4:-10536397 | Msa1139820:CDS |
| CAAAATCCTTTAGTGGCGGC+TGG | 0.473137 | 7_4:-10537246 | Msa1139820:CDS |
| GAAAACGGTATGGTTTGATT+GGG | 0.473363 | 7_4:-10537636 | Msa1139820:CDS |
| GTTGACTTGCCCATTCCATT+CGG | 0.473986 | 7_4:+10537613 | None:intergenic |
| CATCCTCCAGCCGCCACTAA+AGG | 0.476753 | 7_4:+10537240 | None:intergenic |
| TAGTAGGTCCACAAAGTGTT+GGG | 0.476791 | 7_4:+10536499 | None:intergenic |
| TATCAGGAGGGCAGAAAGCT+CGG | 0.480167 | 7_4:-10536337 | Msa1139820:CDS |
| CAAATATGGGTTGTTGAAGA+TGG | 0.482826 | 7_4:-10536128 | Msa1139820:CDS |
| GTTCAGTAGGTTCAGGAAAG+TGG | 0.490159 | 7_4:+10536747 | None:intergenic |
| CCCTCCTGATAGTTTGACAA+TGG | 0.490991 | 7_4:+10536349 | None:intergenic |
| ATCAGGAGGGCAGAAAGCTC+GGG | 0.492201 | 7_4:-10536336 | Msa1139820:CDS |
| TGATGCATTGGCTGATGCGC+TGG | 0.493126 | 7_4:-10536231 | Msa1139820:CDS |
| AGACTCTCGGATGTTGATGT+TGG | 0.493998 | 7_4:-10536662 | Msa1139820:CDS |
| CCTCAGGTCAAGATGATTAG+TGG | 0.497140 | 7_4:+10537159 | None:intergenic |
| AAAAGCAAAAGCAAGGGAAA+GGG | 0.497237 | 7_4:-10536836 | Msa1139820:CDS |
| TAAAGATATCTCATGGAAAA+CGG | 0.497247 | 7_4:-10537651 | Msa1139820:CDS |
| TGTCATTGGAAGTCGAGCTT+CGG | 0.497618 | 7_4:-10537776 | Msa1139820:CDS |
| GGCAAAGAAAGAAGCTCTTA+GGG | 0.499292 | 7_4:-10537821 | Msa1139820:CDS |
| GGACTCGTGTTGCCATTGTT+GGG | 0.501610 | 7_4:-10536628 | Msa1139820:CDS |
| CTGGTTGAGCAGGAGGTAGT+TGG | 0.501745 | 7_4:-10537532 | Msa1139820:CDS |
| CGTCCTACAAAATCCTTTAG+TGG | 0.502520 | 7_4:-10537253 | Msa1139820:CDS |
| TTGAAACTTCATTTCTATCG+TGG | 0.502609 | 7_4:-10537022 | Msa1139820:CDS |
| TATTGAAGCTTCTTGCTTGG+AGG | 0.502846 | 7_4:-10537588 | Msa1139820:CDS |
| TTCGAAGAAGTCAGAAGTTG+AGG | 0.502896 | 7_4:-10536535 | Msa1139820:CDS |
| AATGCAGCTTCTGGTGAAGA+AGG | 0.504187 | 7_4:-10537427 | Msa1139820:CDS |
| GAGGCTGTTCGTGCAAAACT+TGG | 0.509140 | 7_4:-10536407 | Msa1139820:CDS |
| AGAAGTCAGAAGTTGAGGAT+AGG | 0.509662 | 7_4:-10536530 | Msa1139820:CDS |
| CTTTGCCTGTTCAGCCACAT+GGG | 0.510208 | 7_4:+10537837 | None:intergenic |
| TTAGTAGGTCCACAAAGTGT+TGG | 0.510313 | 7_4:+10536498 | None:intergenic |
| TCTTGCTTGGAGGAAGATAC+CGG | 0.512342 | 7_4:-10537578 | Msa1139820:CDS |
| TAGAGGAGTACTTGTGTCGT+TGG | 0.513249 | 7_4:-10537123 | Msa1139820:CDS |
| AGTGGAGGTGTAAGTTCAGT+AGG | 0.514390 | 7_4:+10536734 | None:intergenic |
| TTTGATTGGGCCGAATGGAA+TGG | 0.517459 | 7_4:-10537623 | Msa1139820:CDS |
| GAAAAGCAAAAGCAAGGGAA+AGG | 0.518492 | 7_4:-10536837 | Msa1139820:CDS |
| TATGAACAATTACAACTGAT+GGG | 0.518809 | 7_4:-10537346 | Msa1139820:CDS |
| GTATGAACAATTACAACTGA+TGG | 0.520659 | 7_4:-10537347 | Msa1139820:CDS |
| AAATGATACTAACGAGGAAG+AGG | 0.525034 | 7_4:-10537395 | Msa1139820:CDS |
| GATGCGCTGGATGAATTCAC+TGG | 0.525230 | 7_4:-10536218 | Msa1139820:CDS |
| TGTCCTTCTGGTTGAGCAGG+AGG | 0.526914 | 7_4:-10537539 | Msa1139820:CDS |
| TAAGCCCCTCCTGGTCTGGA+TGG | 0.527473 | 7_4:+10536438 | None:intergenic |
| ATTGTTGGGCCTAATGGTGC+TGG | 0.529640 | 7_4:-10536614 | Msa1139820:CDS |
| AGACGAAGAAGGTACTGAAC+AGG | 0.533085 | 7_4:+10536461 | None:intergenic |
| TTAGAAACATCTTTGCTACC+TGG | 0.537424 | 7_4:+10538123 | None:intergenic |
| TGGAACATTTGAGGATTACA+AGG | 0.538781 | 7_4:-10536087 | Msa1139820:CDS |
| TATGCAAAGTATTGATGCAT+TGG | 0.543005 | 7_4:-10536243 | Msa1139820:CDS |
| ACTAACGAGGAAGAGGATGC+AGG | 0.546607 | 7_4:-10537388 | Msa1139820:CDS |
| ACTTCAGTAAAGATATCTCA+TGG | 0.548568 | 7_4:-10537658 | Msa1139820:CDS |
| GAACAAGGCTCAACAAGATA+AGG | 0.549422 | 7_4:-10536897 | Msa1139820:CDS |
| AGCTAGAAGAACCGGGAACA+AGG | 0.549535 | 7_4:-10536912 | Msa1139820:CDS |
| TGAAGAACGGAGTCAAATAT+GGG | 0.551908 | 7_4:-10536141 | Msa1139820:CDS |
| ATATCTCATGGAAAACGGTA+TGG | 0.553869 | 7_4:-10537646 | Msa1139820:CDS |
| GGCACTGTCAGAAATTTCCC+TGG | 0.559821 | 7_4:-10536107 | Msa1139820:CDS |
| CGTCTCCATCCAGACCAGGA+GGG | 0.561023 | 7_4:-10536443 | Msa1139820:CDS |
| TGAGTCTGAAGAGGAGCAAG+AGG | 0.562122 | 7_4:-10537947 | Msa1139820:CDS |
| GTCTCCATCCAGACCAGGAG+GGG | 0.564083 | 7_4:-10536442 | Msa1139820:CDS |
| CACTAATCATCTTGACCTGA+GGG | 0.565689 | 7_4:-10537158 | Msa1139820:CDS |
| TTCATCCATACCTGCCAACA+TGG | 0.566109 | 7_4:+10538077 | None:intergenic |
| CTTTGTGGACCTACTAACAA+TGG | 0.566897 | 7_4:-10536492 | Msa1139820:CDS |
| TCTTCGTCTCCATCCAGACC+AGG | 0.570272 | 7_4:-10536447 | Msa1139820:CDS |
| ACTTCAATAAGCTGCAGAAG+TGG | 0.570862 | 7_4:+10536716 | None:intergenic |
| GGAATCGAAAAGCAAAAGCA+AGG | 0.571756 | 7_4:-10536843 | Msa1139820:CDS |
| TATGGTTTGATTGGGCCGAA+TGG | 0.572136 | 7_4:-10537628 | Msa1139820:CDS |
| TTGACCTGAGGGCTGTTCTG+TGG | 0.577822 | 7_4:-10537147 | Msa1139820:CDS |
| ACATCAATATTCTTAGGCAC+CGG | 0.584768 | 7_4:+10537559 | None:intergenic |
| ACACTGCTGAATCTTCTAGC+TGG | 0.589769 | 7_4:-10536584 | Msa1139820:CDS |
| TTCAGACTCATCATCATCAG+AGG | 0.591473 | 7_4:+10537960 | None:intergenic |
| TGATGATGATGAGTCTGAAG+AGG | 0.592511 | 7_4:-10537956 | Msa1139820:CDS |
| TAGAGGTACCACACAAGTGG+AGG | 0.593380 | 7_4:-10536787 | Msa1139820:CDS |
| GCCCGATTTGAAGCCACTTG+AGG | 0.595553 | 7_4:-10537914 | Msa1139820:CDS |
| GAATCGAAAAGCAAAAGCAA+GGG | 0.597247 | 7_4:-10536842 | Msa1139820:CDS |
| CTTGTGTGGTACCTCTACTT+GGG | 0.597963 | 7_4:+10536793 | None:intergenic |
| CTCAGGTCAAGATGATTAGT+GGG | 0.599587 | 7_4:+10537160 | None:intergenic |
| GGGAAAGGGAAAGGTTGATG+AGG | 0.600456 | 7_4:-10536822 | Msa1139820:CDS |
| CCGAGAGTCTAAAATCCTCT+CGG | 0.603865 | 7_4:+10536675 | None:intergenic |
| CTAACCACAGAACAGCCCTC+AGG | 0.604974 | 7_4:+10537143 | None:intergenic |
| CTGTAGTCCCTCCACTTGTG+TGG | 0.605482 | 7_4:+10536779 | None:intergenic |
| TTGATGTTGGTATTGATATG+GGG | 0.606166 | 7_4:-10536649 | Msa1139820:CDS |
| AAGTAGAGGTACCACACAAG+TGG | 0.606298 | 7_4:-10536790 | Msa1139820:CDS |
| CAAAAGCAAGGGAAAGGGAA+AGG | 0.608390 | 7_4:-10536831 | Msa1139820:CDS |
| TCATCGAGCAATAATAGAGT+GGG | 0.608704 | 7_4:+10537184 | None:intergenic |
| TCAATAAGCTGCAGAAGTGG+AGG | 0.610264 | 7_4:+10536719 | None:intergenic |
| GGTGATTTGGTTCCAAGTGA+AGG | 0.610276 | 7_4:-10536563 | Msa1139820:CDS |
| CCATCTACAAAGGTTAAACC+AGG | 0.612504 | 7_4:-10538141 | Msa1139820:CDS |
| AGGAGCAAGAGGAAAAGCAT+AGG | 0.613429 | 7_4:-10537936 | Msa1139820:CDS |
| TCAGACTCATCATCATCAGA+GGG | 0.613503 | 7_4:+10537961 | None:intergenic |
| TGTAATCCTCAAATGTTCCA+GGG | 0.613886 | 7_4:+10536090 | None:intergenic |
| TTCATCGAGCAATAATAGAG+TGG | 0.615022 | 7_4:+10537183 | None:intergenic |
| GGAGGGGCTTAGTAAGCAAG+AGG | 0.616783 | 7_4:-10536426 | Msa1139820:CDS |
| CCCATTGTCAAACTATCAGG+AGG | 0.619312 | 7_4:-10536350 | Msa1139820:CDS |
| TCAGCAATAGACACCTCAAG+TGG | 0.621486 | 7_4:+10537901 | None:intergenic |
| TCGGTGCTTGATGGAGATGA+TGG | 0.624032 | 7_4:-10537757 | Msa1139820:CDS |
| TCATCTAACAATAAAATGTG+AGG | 0.624906 | 7_4:+10536284 | None:intergenic |
| CTCCTGATAGTTTGACAATG+GGG | 0.626825 | 7_4:+10536351 | None:intergenic |
| CCACTAATCATCTTGACCTG+AGG | 0.627165 | 7_4:-10537159 | Msa1139820:CDS |
| GGGGTAAGATGATTATGACT+AGG | 0.630245 | 7_4:+10536371 | None:intergenic |
| CTACCTCCTGCTCAACCAGA+AGG | 0.630434 | 7_4:+10537536 | None:intergenic |
| AATCCTTTAGTGGCGGCTGG+AGG | 0.632477 | 7_4:-10537243 | Msa1139820:CDS |
| AGTGTATGCAGAAGCTTTCG+GGG | 0.635811 | 7_4:+10538002 | None:intergenic |
| TGAAAGCAGCTAGAAGAACC+GGG | 0.637063 | 7_4:-10536919 | Msa1139820:CDS |
| AGCACCATTAGGCCCAACAA+TGG | 0.640352 | 7_4:+10536616 | None:intergenic |
| GGTCTGGATGGAGACGAAGA+AGG | 0.643717 | 7_4:+10536450 | None:intergenic |
| GGCTCAACAAGATAAGGTGA+AGG | 0.644665 | 7_4:-10536891 | Msa1139820:CDS |
| TCGTCTCCATCCAGACCAGG+AGG | 0.645629 | 7_4:-10536444 | Msa1139820:CDS |
| TAAAATGTGAGGTCTTGACA+TGG | 0.645742 | 7_4:+10536295 | None:intergenic |
| TCCTGATAGTTTGACAATGG+GGG | 0.650226 | 7_4:+10536352 | None:intergenic |
| TGAGGATGAGACCCAAGTAG+AGG | 0.652669 | 7_4:-10536804 | Msa1139820:CDS |
| AGAGGTACCACACAAGTGGA+GGG | 0.653345 | 7_4:-10536786 | Msa1139820:CDS |
| GACTCATCATCATCAGAGGG+AGG | 0.655723 | 7_4:+10537964 | None:intergenic |
| AGGAGGGCAGAAAGCTCGGG+TGG | 0.658600 | 7_4:-10536333 | Msa1139820:CDS |
| CCTACAAAATCCTTTAGTGG+CGG | 0.660892 | 7_4:-10537250 | Msa1139820:CDS |
| ATGAACAATTACAACTGATG+GGG | 0.661536 | 7_4:-10537345 | Msa1139820:CDS |
| AGCTTCTGGTGAAGAAGGTG+TGG | 0.667605 | 7_4:-10537422 | Msa1139820:CDS |
| GCGCTGGATGAATTCACTGG+TGG | 0.669802 | 7_4:-10536215 | Msa1139820:CDS |
| CCATTGTCAAACTATCAGGA+GGG | 0.684004 | 7_4:-10536349 | Msa1139820:CDS |
| GGATGCAGGACCATCTACAA+AGG | 0.692101 | 7_4:-10538151 | Msa1139820:CDS |
| AGCTCGACTTCCAATGACAA+CGG | 0.700778 | 7_4:+10537780 | None:intergenic |
| CAAGTGGAGGGACTACAGCG+TGG | 0.701926 | 7_4:-10536774 | Msa1139820:CDS |
| CTTCAGTTACCCAAACCGAG+AGG | 0.710739 | 7_4:-10536690 | Msa1139820:CDS |
| GTGTATGCAGAAGCTTTCGG+GGG | 0.711834 | 7_4:+10538003 | None:intergenic |
| GTGTCTGTGATGATGAAGAA+CGG | 0.713477 | 7_4:-10536154 | Msa1139820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGCAAAGATGTTTCTAAAA+AGG | - | chr7_4:10536099-10536118 | Msa1139820:CDS | 25.0% |
| ! | TAAAGATATCTCATGGAAAA+CGG | - | chr7_4:10536566-10536585 | Msa1139820:CDS | 25.0% |
| ! | TATGAACAATTACAACTGAT+GGG | - | chr7_4:10536871-10536890 | Msa1139820:CDS | 25.0% |
| ! | TCATCTAACAATAAAATGTG+AGG | + | chr7_4:10537936-10537955 | None:intergenic | 25.0% |
| !! | TAGCAAAGATGTTTCTAAAA+AGG | - | chr7_4:10536099-10536118 | Msa1139820:CDS | 25.0% |
| ! | TAAAGATATCTCATGGAAAA+CGG | - | chr7_4:10536566-10536585 | Msa1139820:CDS | 25.0% |
| ! | TATGAACAATTACAACTGAT+GGG | - | chr7_4:10536871-10536890 | Msa1139820:CDS | 25.0% |
| ! | TCATCTAACAATAAAATGTG+AGG | + | chr7_4:10537936-10537955 | None:intergenic | 25.0% |
| AAAAGCTGATAAGCCTAAAA+AGG | - | chr7_4:10536162-10536181 | Msa1139820:CDS | 30.0% | |
| ! | TTATTCGAAGATGCCTTTTT+AGG | + | chr7_4:10536178-10536197 | None:intergenic | 30.0% |
| !! | TAAAAAGGCATCTTCGAATA+AGG | - | chr7_4:10536177-10536196 | Msa1139820:CDS | 30.0% |
| ! | AAAATTTTTCTGTGTCTGCA+CGG | - | chr7_4:10536515-10536534 | Msa1139820:CDS | 30.0% |
| ACTTCAGTAAAGATATCTCA+TGG | - | chr7_4:10536559-10536578 | Msa1139820:CDS | 30.0% | |
| AGAAGGACATCAATATTCTT+AGG | + | chr7_4:10536667-10536686 | None:intergenic | 30.0% | |
| TAAGAATATTGATGTCCTTC+TGG | - | chr7_4:10536666-10536685 | Msa1139820:CDS | 30.0% | |
| GGATAAAAATGATACTAACG+AGG | - | chr7_4:10536816-10536835 | Msa1139820:CDS | 30.0% | |
| GTATGAACAATTACAACTGA+TGG | - | chr7_4:10536870-10536889 | Msa1139820:CDS | 30.0% | |
| ATGAACAATTACAACTGATG+GGG | - | chr7_4:10536872-10536891 | Msa1139820:CDS | 30.0% | |
| TTGAAACTTCATTTCTATCG+TGG | - | chr7_4:10537195-10537214 | Msa1139820:CDS | 30.0% | |
| !! | AATTTTGATGCTTTTGAGAG+TGG | - | chr7_4:10537219-10537238 | Msa1139820:CDS | 30.0% |
| !! | ATTTTGATGCTTTTGAGAGT+GGG | - | chr7_4:10537220-10537239 | Msa1139820:CDS | 30.0% |
| !! | TGTTGATGTTGGTATTGATA+TGG | - | chr7_4:10537566-10537585 | Msa1139820:CDS | 30.0% |
| !! | GTTGATGTTGGTATTGATAT+GGG | - | chr7_4:10537567-10537586 | Msa1139820:CDS | 30.0% |
| !! | TTGATGTTGGTATTGATATG+GGG | - | chr7_4:10537568-10537587 | Msa1139820:CDS | 30.0% |
| GTGCAAAACTTGGTAAATAT+GGG | - | chr7_4:10537820-10537839 | Msa1139820:CDS | 30.0% | |
| ! | TGCATATCCAAATGATTTGT+GGG | + | chr7_4:10537960-10537979 | None:intergenic | 30.0% |
| TTGCATATCCAAATGATTTG+TGG | + | chr7_4:10537961-10537980 | None:intergenic | 30.0% | |
| !! | TATGCAAAGTATTGATGCAT+TGG | - | chr7_4:10537974-10537993 | Msa1139820:CDS | 30.0% |
| AAAAGCTGATAAGCCTAAAA+AGG | - | chr7_4:10536162-10536181 | Msa1139820:CDS | 30.0% | |
| ! | TTATTCGAAGATGCCTTTTT+AGG | + | chr7_4:10536178-10536197 | None:intergenic | 30.0% |
| !! | TAAAAAGGCATCTTCGAATA+AGG | - | chr7_4:10536177-10536196 | Msa1139820:CDS | 30.0% |
| ! | AAAATTTTTCTGTGTCTGCA+CGG | - | chr7_4:10536515-10536534 | Msa1139820:CDS | 30.0% |
| ACTTCAGTAAAGATATCTCA+TGG | - | chr7_4:10536559-10536578 | Msa1139820:CDS | 30.0% | |
| AGAAGGACATCAATATTCTT+AGG | + | chr7_4:10536667-10536686 | None:intergenic | 30.0% | |
| TAAGAATATTGATGTCCTTC+TGG | - | chr7_4:10536666-10536685 | Msa1139820:CDS | 30.0% | |
| GGATAAAAATGATACTAACG+AGG | - | chr7_4:10536816-10536835 | Msa1139820:CDS | 30.0% | |
| GTATGAACAATTACAACTGA+TGG | - | chr7_4:10536870-10536889 | Msa1139820:CDS | 30.0% | |
| ATGAACAATTACAACTGATG+GGG | - | chr7_4:10536872-10536891 | Msa1139820:CDS | 30.0% | |
| TTGAAACTTCATTTCTATCG+TGG | - | chr7_4:10537195-10537214 | Msa1139820:CDS | 30.0% | |
| !! | AATTTTGATGCTTTTGAGAG+TGG | - | chr7_4:10537219-10537238 | Msa1139820:CDS | 30.0% |
| !! | ATTTTGATGCTTTTGAGAGT+GGG | - | chr7_4:10537220-10537239 | Msa1139820:CDS | 30.0% |
| !! | TGTTGATGTTGGTATTGATA+TGG | - | chr7_4:10537566-10537585 | Msa1139820:CDS | 30.0% |
| !! | GTTGATGTTGGTATTGATAT+GGG | - | chr7_4:10537567-10537586 | Msa1139820:CDS | 30.0% |
| !! | TTGATGTTGGTATTGATATG+GGG | - | chr7_4:10537568-10537587 | Msa1139820:CDS | 30.0% |
| GTGCAAAACTTGGTAAATAT+GGG | - | chr7_4:10537820-10537839 | Msa1139820:CDS | 30.0% | |
| ! | TGCATATCCAAATGATTTGT+GGG | + | chr7_4:10537960-10537979 | None:intergenic | 30.0% |
| TTGCATATCCAAATGATTTG+TGG | + | chr7_4:10537961-10537980 | None:intergenic | 30.0% | |
| !! | TATGCAAAGTATTGATGCAT+TGG | - | chr7_4:10537974-10537993 | Msa1139820:CDS | 30.0% |
| TTAGAAACATCTTTGCTACC+TGG | + | chr7_4:10536097-10536116 | None:intergenic | 35.0% | |
| ! | AAATTTTTCTGTGTCTGCAC+GGG | - | chr7_4:10536516-10536535 | Msa1139820:CDS | 35.0% |
| ATATCTCATGGAAAACGGTA+TGG | - | chr7_4:10536571-10536590 | Msa1139820:CDS | 35.0% | |
| GAAAACGGTATGGTTTGATT+GGG | - | chr7_4:10536581-10536600 | Msa1139820:CDS | 35.0% | |
| ACATCAATATTCTTAGGCAC+CGG | + | chr7_4:10536661-10536680 | None:intergenic | 35.0% | |
| AAATGATACTAACGAGGAAG+AGG | - | chr7_4:10536822-10536841 | Msa1139820:CDS | 35.0% | |
| !!! | TCAAAGATTTTAGCTGGTCT+GGG | - | chr7_4:10536919-10536938 | Msa1139820:CDS | 35.0% |
| ! | CACTAAAGGATTTTGTAGGA+CGG | + | chr7_4:10536966-10536985 | None:intergenic | 35.0% |
| TCATCGAGCAATAATAGAGT+GGG | + | chr7_4:10537036-10537055 | None:intergenic | 35.0% | |
| TTCATCGAGCAATAATAGAG+TGG | + | chr7_4:10537037-10537056 | None:intergenic | 35.0% | |
| ! | GTGTCGTTGGAAAAAAACTT+TGG | - | chr7_4:10537107-10537126 | Msa1139820:CDS | 35.0% |
| TCGTTGGAAAAAAACTTTGG+TGG | - | chr7_4:10537110-10537129 | Msa1139820:CDS | 35.0% | |
| GAATCGAAAAGCAAAAGCAA+GGG | - | chr7_4:10537375-10537394 | Msa1139820:CDS | 35.0% | |
| AAAAGCAAAAGCAAGGGAAA+GGG | - | chr7_4:10537381-10537400 | Msa1139820:CDS | 35.0% | |
| GTGTTTCATCCATTGTTAGT+AGG | + | chr7_4:10537737-10537756 | None:intergenic | 35.0% | |
| CGTGCAAAACTTGGTAAATA+TGG | - | chr7_4:10537819-10537838 | Msa1139820:CDS | 35.0% | |
| TAAAATGTGAGGTCTTGACA+TGG | + | chr7_4:10537925-10537944 | None:intergenic | 35.0% | |
| AGATGAACCCACAAATCATT+TGG | - | chr7_4:10537950-10537969 | Msa1139820:CDS | 35.0% | |
| ATGAAGAACGGAGTCAAATA+TGG | - | chr7_4:10538075-10538094 | Msa1139820:CDS | 35.0% | |
| TGAAGAACGGAGTCAAATAT+GGG | - | chr7_4:10538076-10538095 | Msa1139820:CDS | 35.0% | |
| ! | CAAATATGGGTTGTTGAAGA+TGG | - | chr7_4:10538089-10538108 | Msa1139820:CDS | 35.0% |
| AAATTTCCCTGGAACATTTG+AGG | - | chr7_4:10538121-10538140 | Msa1139820:CDS | 35.0% | |
| TGTAATCCTCAAATGTTCCA+GGG | + | chr7_4:10538130-10538149 | None:intergenic | 35.0% | |
| TTGTAATCCTCAAATGTTCC+AGG | + | chr7_4:10538131-10538150 | None:intergenic | 35.0% | |
| TGGAACATTTGAGGATTACA+AGG | - | chr7_4:10538130-10538149 | Msa1139820:CDS | 35.0% | |
| TTAGAAACATCTTTGCTACC+TGG | + | chr7_4:10536097-10536116 | None:intergenic | 35.0% | |
| ! | AAATTTTTCTGTGTCTGCAC+GGG | - | chr7_4:10536516-10536535 | Msa1139820:CDS | 35.0% |
| ATATCTCATGGAAAACGGTA+TGG | - | chr7_4:10536571-10536590 | Msa1139820:CDS | 35.0% | |
| GAAAACGGTATGGTTTGATT+GGG | - | chr7_4:10536581-10536600 | Msa1139820:CDS | 35.0% | |
| ACATCAATATTCTTAGGCAC+CGG | + | chr7_4:10536661-10536680 | None:intergenic | 35.0% | |
| AAATGATACTAACGAGGAAG+AGG | - | chr7_4:10536822-10536841 | Msa1139820:CDS | 35.0% | |
| !!! | TCAAAGATTTTAGCTGGTCT+GGG | - | chr7_4:10536919-10536938 | Msa1139820:CDS | 35.0% |
| ! | CACTAAAGGATTTTGTAGGA+CGG | + | chr7_4:10536966-10536985 | None:intergenic | 35.0% |
| TCATCGAGCAATAATAGAGT+GGG | + | chr7_4:10537036-10537055 | None:intergenic | 35.0% | |
| TTCATCGAGCAATAATAGAG+TGG | + | chr7_4:10537037-10537056 | None:intergenic | 35.0% | |
| ! | GTGTCGTTGGAAAAAAACTT+TGG | - | chr7_4:10537107-10537126 | Msa1139820:CDS | 35.0% |
| TCGTTGGAAAAAAACTTTGG+TGG | - | chr7_4:10537110-10537129 | Msa1139820:CDS | 35.0% | |
| GAATCGAAAAGCAAAAGCAA+GGG | - | chr7_4:10537375-10537394 | Msa1139820:CDS | 35.0% | |
| AAAAGCAAAAGCAAGGGAAA+GGG | - | chr7_4:10537381-10537400 | Msa1139820:CDS | 35.0% | |
| GTGTTTCATCCATTGTTAGT+AGG | + | chr7_4:10537737-10537756 | None:intergenic | 35.0% | |
| CGTGCAAAACTTGGTAAATA+TGG | - | chr7_4:10537819-10537838 | Msa1139820:CDS | 35.0% | |
| TAAAATGTGAGGTCTTGACA+TGG | + | chr7_4:10537925-10537944 | None:intergenic | 35.0% | |
| AGATGAACCCACAAATCATT+TGG | - | chr7_4:10537950-10537969 | Msa1139820:CDS | 35.0% | |
| ATGAAGAACGGAGTCAAATA+TGG | - | chr7_4:10538075-10538094 | Msa1139820:CDS | 35.0% | |
| TGAAGAACGGAGTCAAATAT+GGG | - | chr7_4:10538076-10538095 | Msa1139820:CDS | 35.0% | |
| ! | CAAATATGGGTTGTTGAAGA+TGG | - | chr7_4:10538089-10538108 | Msa1139820:CDS | 35.0% |
| AAATTTCCCTGGAACATTTG+AGG | - | chr7_4:10538121-10538140 | Msa1139820:CDS | 35.0% | |
| TGTAATCCTCAAATGTTCCA+GGG | + | chr7_4:10538130-10538149 | None:intergenic | 35.0% | |
| TTGTAATCCTCAAATGTTCC+AGG | + | chr7_4:10538131-10538150 | None:intergenic | 35.0% | |
| TGGAACATTTGAGGATTACA+AGG | - | chr7_4:10538130-10538149 | Msa1139820:CDS | 35.0% | |
| AAGAAAAAGTCAGAGGATGC+AGG | - | chr7_4:10536052-10536071 | Msa1139820:CDS | 40.0% | |
| CCTGGTTTAACCTTTGTAGA+TGG | + | chr7_4:10536079-10536098 | None:intergenic | 40.0% | |
| CCATCTACAAAGGTTAAACC+AGG | - | chr7_4:10536076-10536095 | Msa1139820:CDS | 40.0% | |
| ! | ATTTTCTGTCTCTGCCATGT+TGG | - | chr7_4:10536126-10536145 | Msa1139820:CDS | 40.0% |
| TCAGTGTATGCAGAAGCTTT+CGG | + | chr7_4:10536220-10536239 | None:intergenic | 40.0% | |
| TCAGACTCATCATCATCAGA+GGG | + | chr7_4:10536259-10536278 | None:intergenic | 40.0% | |
| TTCAGACTCATCATCATCAG+AGG | + | chr7_4:10536260-10536279 | None:intergenic | 40.0% | |
| ! | TGATGATGATGAGTCTGAAG+AGG | - | chr7_4:10536261-10536280 | Msa1139820:CDS | 40.0% |
| !!! | AGATATTTTAGCTGCCCATG+TGG | - | chr7_4:10536366-10536385 | Msa1139820:CDS | 40.0% |
| AGGCAAAGAAAGAAGCTCTT+AGG | - | chr7_4:10536395-10536414 | Msa1139820:CDS | 40.0% | |
| GGCAAAGAAAGAAGCTCTTA+GGG | - | chr7_4:10536396-10536415 | Msa1139820:CDS | 40.0% | |
| ! | GATGCTTTTACCGTTGTCAT+TGG | - | chr7_4:10536427-10536446 | Msa1139820:CDS | 40.0% |
| ! | AATTTTTCTGTGTCTGCACG+GGG | - | chr7_4:10536517-10536536 | Msa1139820:CDS | 40.0% |
| GGAAAACGGTATGGTTTGAT+TGG | - | chr7_4:10536580-10536599 | Msa1139820:CDS | 40.0% | |
| CACTATTGAAGCTTCTTGCT+TGG | - | chr7_4:10536626-10536645 | Msa1139820:CDS | 40.0% | |
| TATTGAAGCTTCTTGCTTGG+AGG | - | chr7_4:10536629-10536648 | Msa1139820:CDS | 40.0% | |
| GATCTACAAAATGCAGCTTC+TGG | - | chr7_4:10536781-10536800 | Msa1139820:CDS | 40.0% | |
| !! | CAAGCGTCAAAGATTTTAGC+TGG | - | chr7_4:10536913-10536932 | Msa1139820:CDS | 40.0% |
| !!! | GTCAAAGATTTTAGCTGGTC+TGG | - | chr7_4:10536918-10536937 | Msa1139820:CDS | 40.0% |
| ! | GGTTTTACAAAGGACATGCA+GGG | - | chr7_4:10536940-10536959 | Msa1139820:CDS | 40.0% |
| CGTCCTACAAAATCCTTTAG+TGG | - | chr7_4:10536964-10536983 | Msa1139820:CDS | 40.0% | |
| CCTACAAAATCCTTTAGTGG+CGG | - | chr7_4:10536967-10536986 | Msa1139820:CDS | 40.0% | |
| CTCAGGTCAAGATGATTAGT+GGG | + | chr7_4:10537060-10537079 | None:intergenic | 40.0% | |
| CACTAATCATCTTGACCTGA+GGG | - | chr7_4:10537059-10537078 | Msa1139820:CDS | 40.0% | |
| TTGAAAGCAGCTAGAAGAAC+CGG | - | chr7_4:10537297-10537316 | Msa1139820:CDS | 40.0% | |
| GAACAAGGCTCAACAAGATA+AGG | - | chr7_4:10537320-10537339 | Msa1139820:CDS | 40.0% | |
| GGAATCGAAAAGCAAAAGCA+AGG | - | chr7_4:10537374-10537393 | Msa1139820:CDS | 40.0% | |
| GAAAAGCAAAAGCAAGGGAA+AGG | - | chr7_4:10537380-10537399 | Msa1139820:CDS | 40.0% | |
| ACTTCAATAAGCTGCAGAAG+TGG | + | chr7_4:10537504-10537523 | None:intergenic | 40.0% | |
| ! | GTCTAAAATCCTCTCGGTTT+GGG | + | chr7_4:10537539-10537558 | None:intergenic | 40.0% |
| ! | AGTCTAAAATCCTCTCGGTT+TGG | + | chr7_4:10537540-10537559 | None:intergenic | 40.0% |
| ! | GTAGATTTTCCAGCACCATT+AGG | + | chr7_4:10537615-10537634 | None:intergenic | 40.0% |
| ! | GAATCTTCTAGCTGGTGATT+TGG | - | chr7_4:10537641-10537660 | Msa1139820:CDS | 40.0% |
| TTCGAAGAAGTCAGAAGTTG+AGG | - | chr7_4:10537682-10537701 | Msa1139820:CDS | 40.0% | |
| AGAAGTCAGAAGTTGAGGAT+AGG | - | chr7_4:10537687-10537706 | Msa1139820:CDS | 40.0% | |
| GAAGTCAGAAGTTGAGGATA+GGG | - | chr7_4:10537688-10537707 | Msa1139820:CDS | 40.0% | |
| GAGATATTCCCAACACTTTG+TGG | - | chr7_4:10537710-10537729 | Msa1139820:CDS | 40.0% | |
| ! | TAGTAGGTCCACAAAGTGTT+GGG | + | chr7_4:10537721-10537740 | None:intergenic | 40.0% |
| TTAGTAGGTCCACAAAGTGT+TGG | + | chr7_4:10537722-10537741 | None:intergenic | 40.0% | |
| CTTTGTGGACCTACTAACAA+TGG | - | chr7_4:10537725-10537744 | Msa1139820:CDS | 40.0% | |
| GGGGTAAGATGATTATGACT+AGG | + | chr7_4:10537849-10537868 | None:intergenic | 40.0% | |
| TCCTGATAGTTTGACAATGG+GGG | + | chr7_4:10537868-10537887 | None:intergenic | 40.0% | |
| CTCCTGATAGTTTGACAATG+GGG | + | chr7_4:10537869-10537888 | None:intergenic | 40.0% | |
| CCTCCTGATAGTTTGACAAT+GGG | + | chr7_4:10537870-10537889 | None:intergenic | 40.0% | |
| CCATTGTCAAACTATCAGGA+GGG | - | chr7_4:10537868-10537887 | Msa1139820:CDS | 40.0% | |
| ! | GTGTCTGTGATGATGAAGAA+CGG | - | chr7_4:10538063-10538082 | Msa1139820:CDS | 40.0% |
| AAGAAAAAGTCAGAGGATGC+AGG | - | chr7_4:10536052-10536071 | Msa1139820:CDS | 40.0% | |
| CCTGGTTTAACCTTTGTAGA+TGG | + | chr7_4:10536079-10536098 | None:intergenic | 40.0% | |
| CCATCTACAAAGGTTAAACC+AGG | - | chr7_4:10536076-10536095 | Msa1139820:CDS | 40.0% | |
| ! | ATTTTCTGTCTCTGCCATGT+TGG | - | chr7_4:10536126-10536145 | Msa1139820:CDS | 40.0% |
| TCAGTGTATGCAGAAGCTTT+CGG | + | chr7_4:10536220-10536239 | None:intergenic | 40.0% | |
| TCAGACTCATCATCATCAGA+GGG | + | chr7_4:10536259-10536278 | None:intergenic | 40.0% | |
| TTCAGACTCATCATCATCAG+AGG | + | chr7_4:10536260-10536279 | None:intergenic | 40.0% | |
| ! | TGATGATGATGAGTCTGAAG+AGG | - | chr7_4:10536261-10536280 | Msa1139820:CDS | 40.0% |
| !!! | AGATATTTTAGCTGCCCATG+TGG | - | chr7_4:10536366-10536385 | Msa1139820:CDS | 40.0% |
| AGGCAAAGAAAGAAGCTCTT+AGG | - | chr7_4:10536395-10536414 | Msa1139820:CDS | 40.0% | |
| GGCAAAGAAAGAAGCTCTTA+GGG | - | chr7_4:10536396-10536415 | Msa1139820:CDS | 40.0% | |
| ! | GATGCTTTTACCGTTGTCAT+TGG | - | chr7_4:10536427-10536446 | Msa1139820:CDS | 40.0% |
| ! | AATTTTTCTGTGTCTGCACG+GGG | - | chr7_4:10536517-10536536 | Msa1139820:CDS | 40.0% |
| GGAAAACGGTATGGTTTGAT+TGG | - | chr7_4:10536580-10536599 | Msa1139820:CDS | 40.0% | |
| CACTATTGAAGCTTCTTGCT+TGG | - | chr7_4:10536626-10536645 | Msa1139820:CDS | 40.0% | |
| TATTGAAGCTTCTTGCTTGG+AGG | - | chr7_4:10536629-10536648 | Msa1139820:CDS | 40.0% | |
| GATCTACAAAATGCAGCTTC+TGG | - | chr7_4:10536781-10536800 | Msa1139820:CDS | 40.0% | |
| !! | CAAGCGTCAAAGATTTTAGC+TGG | - | chr7_4:10536913-10536932 | Msa1139820:CDS | 40.0% |
| !!! | GTCAAAGATTTTAGCTGGTC+TGG | - | chr7_4:10536918-10536937 | Msa1139820:CDS | 40.0% |
| ! | GGTTTTACAAAGGACATGCA+GGG | - | chr7_4:10536940-10536959 | Msa1139820:CDS | 40.0% |
| CGTCCTACAAAATCCTTTAG+TGG | - | chr7_4:10536964-10536983 | Msa1139820:CDS | 40.0% | |
| CCTACAAAATCCTTTAGTGG+CGG | - | chr7_4:10536967-10536986 | Msa1139820:CDS | 40.0% | |
| CTCAGGTCAAGATGATTAGT+GGG | + | chr7_4:10537060-10537079 | None:intergenic | 40.0% | |
| CACTAATCATCTTGACCTGA+GGG | - | chr7_4:10537059-10537078 | Msa1139820:CDS | 40.0% | |
| TTGAAAGCAGCTAGAAGAAC+CGG | - | chr7_4:10537297-10537316 | Msa1139820:CDS | 40.0% | |
| GAACAAGGCTCAACAAGATA+AGG | - | chr7_4:10537320-10537339 | Msa1139820:CDS | 40.0% | |
| GGAATCGAAAAGCAAAAGCA+AGG | - | chr7_4:10537374-10537393 | Msa1139820:CDS | 40.0% | |
| GAAAAGCAAAAGCAAGGGAA+AGG | - | chr7_4:10537380-10537399 | Msa1139820:CDS | 40.0% | |
| ACTTCAATAAGCTGCAGAAG+TGG | + | chr7_4:10537504-10537523 | None:intergenic | 40.0% | |
| ! | GTCTAAAATCCTCTCGGTTT+GGG | + | chr7_4:10537539-10537558 | None:intergenic | 40.0% |
| ! | AGTCTAAAATCCTCTCGGTT+TGG | + | chr7_4:10537540-10537559 | None:intergenic | 40.0% |
| ! | GTAGATTTTCCAGCACCATT+AGG | + | chr7_4:10537615-10537634 | None:intergenic | 40.0% |
| ! | GAATCTTCTAGCTGGTGATT+TGG | - | chr7_4:10537641-10537660 | Msa1139820:CDS | 40.0% |
| TTCGAAGAAGTCAGAAGTTG+AGG | - | chr7_4:10537682-10537701 | Msa1139820:CDS | 40.0% | |
| AGAAGTCAGAAGTTGAGGAT+AGG | - | chr7_4:10537687-10537706 | Msa1139820:CDS | 40.0% | |
| GAAGTCAGAAGTTGAGGATA+GGG | - | chr7_4:10537688-10537707 | Msa1139820:CDS | 40.0% | |
| GAGATATTCCCAACACTTTG+TGG | - | chr7_4:10537710-10537729 | Msa1139820:CDS | 40.0% | |
| ! | TAGTAGGTCCACAAAGTGTT+GGG | + | chr7_4:10537721-10537740 | None:intergenic | 40.0% |
| TTAGTAGGTCCACAAAGTGT+TGG | + | chr7_4:10537722-10537741 | None:intergenic | 40.0% | |
| CTTTGTGGACCTACTAACAA+TGG | - | chr7_4:10537725-10537744 | Msa1139820:CDS | 40.0% | |
| GGGGTAAGATGATTATGACT+AGG | + | chr7_4:10537849-10537868 | None:intergenic | 40.0% | |
| TCCTGATAGTTTGACAATGG+GGG | + | chr7_4:10537868-10537887 | None:intergenic | 40.0% | |
| CTCCTGATAGTTTGACAATG+GGG | + | chr7_4:10537869-10537888 | None:intergenic | 40.0% | |
| CCTCCTGATAGTTTGACAAT+GGG | + | chr7_4:10537870-10537889 | None:intergenic | 40.0% | |
| CCATTGTCAAACTATCAGGA+GGG | - | chr7_4:10537868-10537887 | Msa1139820:CDS | 40.0% | |
| ! | GTGTCTGTGATGATGAAGAA+CGG | - | chr7_4:10538063-10538082 | Msa1139820:CDS | 40.0% |
| TTCATCCATACCTGCCAACA+TGG | + | chr7_4:10536143-10536162 | None:intergenic | 45.0% | |
| AGTGTATGCAGAAGCTTTCG+GGG | + | chr7_4:10536218-10536237 | None:intergenic | 45.0% | |
| CAGTGTATGCAGAAGCTTTC+GGG | + | chr7_4:10536219-10536238 | None:intergenic | 45.0% | |
| ! | AGGAGCAAGAGGAAAAGCAT+AGG | - | chr7_4:10536281-10536300 | Msa1139820:CDS | 45.0% |
| ACCTCAAGTGGCTTCAAATC+GGG | + | chr7_4:10536307-10536326 | None:intergenic | 45.0% | |
| CACCTCAAGTGGCTTCAAAT+CGG | + | chr7_4:10536308-10536327 | None:intergenic | 45.0% | |
| TCAGCAATAGACACCTCAAG+TGG | + | chr7_4:10536319-10536338 | None:intergenic | 45.0% | |
| AGCTCGACTTCCAATGACAA+CGG | + | chr7_4:10536440-10536459 | None:intergenic | 45.0% | |
| TGTCATTGGAAGTCGAGCTT+CGG | - | chr7_4:10536441-10536460 | Msa1139820:CDS | 45.0% | |
| TATGGTTTGATTGGGCCGAA+TGG | - | chr7_4:10536589-10536608 | Msa1139820:CDS | 45.0% | |
| TTTGATTGGGCCGAATGGAA+TGG | - | chr7_4:10536594-10536613 | Msa1139820:CDS | 45.0% | |
| TTGATTGGGCCGAATGGAAT+GGG | - | chr7_4:10536595-10536614 | Msa1139820:CDS | 45.0% | |
| !! | GTTGACTTGCCCATTCCATT+CGG | + | chr7_4:10536607-10536626 | None:intergenic | 45.0% |
| TCTTGCTTGGAGGAAGATAC+CGG | - | chr7_4:10536639-10536658 | Msa1139820:CDS | 45.0% | |
| AATGCAGCTTCTGGTGAAGA+AGG | - | chr7_4:10536790-10536809 | Msa1139820:CDS | 45.0% | |
| !! | AGCTGGTCTGGGTTTTACAA+AGG | - | chr7_4:10536930-10536949 | Msa1139820:CDS | 45.0% |
| ! | GGGTTTTACAAAGGACATGC+AGG | - | chr7_4:10536939-10536958 | Msa1139820:CDS | 45.0% |
| ! | CCGCCACTAAAGGATTTTGT+AGG | + | chr7_4:10536970-10536989 | None:intergenic | 45.0% |
| CCTCAGGTCAAGATGATTAG+TGG | + | chr7_4:10537061-10537080 | None:intergenic | 45.0% | |
| CCACTAATCATCTTGACCTG+AGG | - | chr7_4:10537058-10537077 | Msa1139820:CDS | 45.0% | |
| !! | TAGAGGAGTACTTGTGTCGT+TGG | - | chr7_4:10537094-10537113 | Msa1139820:CDS | 45.0% |
| TGAAAGCAGCTAGAAGAACC+GGG | - | chr7_4:10537298-10537317 | Msa1139820:CDS | 45.0% | |
| !! | ATCTTGTTGAGCCTTGTTCC+CGG | + | chr7_4:10537319-10537338 | None:intergenic | 45.0% |
| GGCTCAACAAGATAAGGTGA+AGG | - | chr7_4:10537326-10537345 | Msa1139820:CDS | 45.0% | |
| AGCTAAGTTTGCAGCAGCTA+AGG | - | chr7_4:10537353-10537372 | Msa1139820:CDS | 45.0% | |
| CAAAAGCAAGGGAAAGGGAA+AGG | - | chr7_4:10537386-10537405 | Msa1139820:CDS | 45.0% | |
| CTTGTGTGGTACCTCTACTT+GGG | + | chr7_4:10537427-10537446 | None:intergenic | 45.0% | |
| ACTTGTGTGGTACCTCTACT+TGG | + | chr7_4:10537428-10537447 | None:intergenic | 45.0% | |
| !! | AAGTAGAGGTACCACACAAG+TGG | - | chr7_4:10537427-10537446 | Msa1139820:CDS | 45.0% |
| GTTCAGTAGGTTCAGGAAAG+TGG | + | chr7_4:10537473-10537492 | None:intergenic | 45.0% | |
| GGTGTAAGTTCAGTAGGTTC+AGG | + | chr7_4:10537480-10537499 | None:intergenic | 45.0% | |
| ! | AGTGGAGGTGTAAGTTCAGT+AGG | + | chr7_4:10537486-10537505 | None:intergenic | 45.0% |
| TCAATAAGCTGCAGAAGTGG+AGG | + | chr7_4:10537501-10537520 | None:intergenic | 45.0% | |
| ! | CCGAGAGTCTAAAATCCTCT+CGG | + | chr7_4:10537545-10537564 | None:intergenic | 45.0% |
| ! | CCGAGAGGATTTTAGACTCT+CGG | - | chr7_4:10537542-10537561 | Msa1139820:CDS | 45.0% |
| AGACTCTCGGATGTTGATGT+TGG | - | chr7_4:10537555-10537574 | Msa1139820:CDS | 45.0% | |
| ACACTGCTGAATCTTCTAGC+TGG | - | chr7_4:10537633-10537652 | Msa1139820:CDS | 45.0% | |
| !! | GGTGATTTGGTTCCAAGTGA+AGG | - | chr7_4:10537654-10537673 | Msa1139820:CDS | 45.0% |
| CTTCGAACTTCACCTTCACT+TGG | + | chr7_4:10537669-10537688 | None:intergenic | 45.0% | |
| !! | AGACGAAGAAGGTACTGAAC+AGG | + | chr7_4:10537759-10537778 | None:intergenic | 45.0% |
| ACCCCCATTGTCAAACTATC+AGG | - | chr7_4:10537864-10537883 | Msa1139820:CDS | 45.0% | |
| CCCATTGTCAAACTATCAGG+AGG | - | chr7_4:10537867-10537886 | Msa1139820:CDS | 45.0% | |
| CCCTCCTGATAGTTTGACAA+TGG | + | chr7_4:10537871-10537890 | None:intergenic | 45.0% | |
| TTCATCCATACCTGCCAACA+TGG | + | chr7_4:10536143-10536162 | None:intergenic | 45.0% | |
| AGTGTATGCAGAAGCTTTCG+GGG | + | chr7_4:10536218-10536237 | None:intergenic | 45.0% | |
| CAGTGTATGCAGAAGCTTTC+GGG | + | chr7_4:10536219-10536238 | None:intergenic | 45.0% | |
| ! | AGGAGCAAGAGGAAAAGCAT+AGG | - | chr7_4:10536281-10536300 | Msa1139820:CDS | 45.0% |
| ACCTCAAGTGGCTTCAAATC+GGG | + | chr7_4:10536307-10536326 | None:intergenic | 45.0% | |
| CACCTCAAGTGGCTTCAAAT+CGG | + | chr7_4:10536308-10536327 | None:intergenic | 45.0% | |
| TCAGCAATAGACACCTCAAG+TGG | + | chr7_4:10536319-10536338 | None:intergenic | 45.0% | |
| AGCTCGACTTCCAATGACAA+CGG | + | chr7_4:10536440-10536459 | None:intergenic | 45.0% | |
| TGTCATTGGAAGTCGAGCTT+CGG | - | chr7_4:10536441-10536460 | Msa1139820:CDS | 45.0% | |
| TATGGTTTGATTGGGCCGAA+TGG | - | chr7_4:10536589-10536608 | Msa1139820:CDS | 45.0% | |
| TTTGATTGGGCCGAATGGAA+TGG | - | chr7_4:10536594-10536613 | Msa1139820:CDS | 45.0% | |
| TTGATTGGGCCGAATGGAAT+GGG | - | chr7_4:10536595-10536614 | Msa1139820:CDS | 45.0% | |
| !! | GTTGACTTGCCCATTCCATT+CGG | + | chr7_4:10536607-10536626 | None:intergenic | 45.0% |
| TCTTGCTTGGAGGAAGATAC+CGG | - | chr7_4:10536639-10536658 | Msa1139820:CDS | 45.0% | |
| AATGCAGCTTCTGGTGAAGA+AGG | - | chr7_4:10536790-10536809 | Msa1139820:CDS | 45.0% | |
| !! | AGCTGGTCTGGGTTTTACAA+AGG | - | chr7_4:10536930-10536949 | Msa1139820:CDS | 45.0% |
| ! | GGGTTTTACAAAGGACATGC+AGG | - | chr7_4:10536939-10536958 | Msa1139820:CDS | 45.0% |
| ! | CCGCCACTAAAGGATTTTGT+AGG | + | chr7_4:10536970-10536989 | None:intergenic | 45.0% |
| CCTCAGGTCAAGATGATTAG+TGG | + | chr7_4:10537061-10537080 | None:intergenic | 45.0% | |
| CCACTAATCATCTTGACCTG+AGG | - | chr7_4:10537058-10537077 | Msa1139820:CDS | 45.0% | |
| !! | TAGAGGAGTACTTGTGTCGT+TGG | - | chr7_4:10537094-10537113 | Msa1139820:CDS | 45.0% |
| TGAAAGCAGCTAGAAGAACC+GGG | - | chr7_4:10537298-10537317 | Msa1139820:CDS | 45.0% | |
| !! | ATCTTGTTGAGCCTTGTTCC+CGG | + | chr7_4:10537319-10537338 | None:intergenic | 45.0% |
| GGCTCAACAAGATAAGGTGA+AGG | - | chr7_4:10537326-10537345 | Msa1139820:CDS | 45.0% | |
| AGCTAAGTTTGCAGCAGCTA+AGG | - | chr7_4:10537353-10537372 | Msa1139820:CDS | 45.0% | |
| CAAAAGCAAGGGAAAGGGAA+AGG | - | chr7_4:10537386-10537405 | Msa1139820:CDS | 45.0% | |
| CTTGTGTGGTACCTCTACTT+GGG | + | chr7_4:10537427-10537446 | None:intergenic | 45.0% | |
| ACTTGTGTGGTACCTCTACT+TGG | + | chr7_4:10537428-10537447 | None:intergenic | 45.0% | |
| !! | AAGTAGAGGTACCACACAAG+TGG | - | chr7_4:10537427-10537446 | Msa1139820:CDS | 45.0% |
| GTTCAGTAGGTTCAGGAAAG+TGG | + | chr7_4:10537473-10537492 | None:intergenic | 45.0% | |
| GGTGTAAGTTCAGTAGGTTC+AGG | + | chr7_4:10537480-10537499 | None:intergenic | 45.0% | |
| ! | AGTGGAGGTGTAAGTTCAGT+AGG | + | chr7_4:10537486-10537505 | None:intergenic | 45.0% |
| TCAATAAGCTGCAGAAGTGG+AGG | + | chr7_4:10537501-10537520 | None:intergenic | 45.0% | |
| ! | CCGAGAGTCTAAAATCCTCT+CGG | + | chr7_4:10537545-10537564 | None:intergenic | 45.0% |
| ! | CCGAGAGGATTTTAGACTCT+CGG | - | chr7_4:10537542-10537561 | Msa1139820:CDS | 45.0% |
| AGACTCTCGGATGTTGATGT+TGG | - | chr7_4:10537555-10537574 | Msa1139820:CDS | 45.0% | |
| ACACTGCTGAATCTTCTAGC+TGG | - | chr7_4:10537633-10537652 | Msa1139820:CDS | 45.0% | |
| !! | GGTGATTTGGTTCCAAGTGA+AGG | - | chr7_4:10537654-10537673 | Msa1139820:CDS | 45.0% |
| CTTCGAACTTCACCTTCACT+TGG | + | chr7_4:10537669-10537688 | None:intergenic | 45.0% | |
| !! | AGACGAAGAAGGTACTGAAC+AGG | + | chr7_4:10537759-10537778 | None:intergenic | 45.0% |
| ACCCCCATTGTCAAACTATC+AGG | - | chr7_4:10537864-10537883 | Msa1139820:CDS | 45.0% | |
| CCCATTGTCAAACTATCAGG+AGG | - | chr7_4:10537867-10537886 | Msa1139820:CDS | 45.0% | |
| CCCTCCTGATAGTTTGACAA+TGG | + | chr7_4:10537871-10537890 | None:intergenic | 45.0% | |
| GGATGCAGGACCATCTACAA+AGG | - | chr7_4:10536066-10536085 | Msa1139820:CDS | 50.0% | |
| GTGTATGCAGAAGCTTTCGG+GGG | + | chr7_4:10536217-10536236 | None:intergenic | 50.0% | |
| GACTCATCATCATCAGAGGG+AGG | + | chr7_4:10536256-10536275 | None:intergenic | 50.0% | |
| TGAGTCTGAAGAGGAGCAAG+AGG | - | chr7_4:10536270-10536289 | Msa1139820:CDS | 50.0% | |
| CTTTGCCTGTTCAGCCACAT+GGG | + | chr7_4:10536383-10536402 | None:intergenic | 50.0% | |
| TCTTTGCCTGTTCAGCCACA+TGG | + | chr7_4:10536384-10536403 | None:intergenic | 50.0% | |
| ! | TCGGTGCTTGATGGAGATGA+TGG | - | chr7_4:10536460-10536479 | Msa1139820:CDS | 50.0% |
| ! | TGATGTCCTTCTGGTTGAGC+AGG | - | chr7_4:10536675-10536694 | Msa1139820:CDS | 50.0% |
| AGCTTCTGGTGAAGAAGGTG+TGG | - | chr7_4:10536795-10536814 | Msa1139820:CDS | 50.0% | |
| ACTAACGAGGAAGAGGATGC+AGG | - | chr7_4:10536829-10536848 | Msa1139820:CDS | 50.0% | |
| CAAAATCCTTTAGTGGCGGC+TGG | - | chr7_4:10536971-10536990 | Msa1139820:CDS | 50.0% | |
| AGCTAGAAGAACCGGGAACA+AGG | - | chr7_4:10537305-10537324 | Msa1139820:CDS | 50.0% | |
| !! | GGGAAAGGGAAAGGTTGATG+AGG | - | chr7_4:10537395-10537414 | Msa1139820:CDS | 50.0% |
| TGAGGATGAGACCCAAGTAG+AGG | - | chr7_4:10537413-10537432 | Msa1139820:CDS | 50.0% | |
| !! | TAGAGGTACCACACAAGTGG+AGG | - | chr7_4:10537430-10537449 | Msa1139820:CDS | 50.0% |
| !! | AGAGGTACCACACAAGTGGA+GGG | - | chr7_4:10537431-10537450 | Msa1139820:CDS | 50.0% |
| CTTCAGTTACCCAAACCGAG+AGG | - | chr7_4:10537527-10537546 | Msa1139820:CDS | 50.0% | |
| GGACTCGTGTTGCCATTGTT+GGG | - | chr7_4:10537589-10537608 | Msa1139820:CDS | 50.0% | |
| GTTGCCATTGTTGGGCCTAA+TGG | - | chr7_4:10537597-10537616 | Msa1139820:CDS | 50.0% | |
| AGCACCATTAGGCCCAACAA+TGG | + | chr7_4:10537604-10537623 | None:intergenic | 50.0% | |
| ATTGTTGGGCCTAATGGTGC+TGG | - | chr7_4:10537603-10537622 | Msa1139820:CDS | 50.0% | |
| GAGGCTGTTCGTGCAAAACT+TGG | - | chr7_4:10537810-10537829 | Msa1139820:CDS | 50.0% | |
| TATCAGGAGGGCAGAAAGCT+CGG | - | chr7_4:10537880-10537899 | Msa1139820:CDS | 50.0% | |
| GATGCGCTGGATGAATTCAC+TGG | - | chr7_4:10537999-10538018 | Msa1139820:CDS | 50.0% | |
| GGCACTGTCAGAAATTTCCC+TGG | - | chr7_4:10538110-10538129 | Msa1139820:CDS | 50.0% | |
| GGATGCAGGACCATCTACAA+AGG | - | chr7_4:10536066-10536085 | Msa1139820:CDS | 50.0% | |
| GTGTATGCAGAAGCTTTCGG+GGG | + | chr7_4:10536217-10536236 | None:intergenic | 50.0% | |
| GACTCATCATCATCAGAGGG+AGG | + | chr7_4:10536256-10536275 | None:intergenic | 50.0% | |
| TGAGTCTGAAGAGGAGCAAG+AGG | - | chr7_4:10536270-10536289 | Msa1139820:CDS | 50.0% | |
| CTTTGCCTGTTCAGCCACAT+GGG | + | chr7_4:10536383-10536402 | None:intergenic | 50.0% | |
| TCTTTGCCTGTTCAGCCACA+TGG | + | chr7_4:10536384-10536403 | None:intergenic | 50.0% | |
| ! | TCGGTGCTTGATGGAGATGA+TGG | - | chr7_4:10536460-10536479 | Msa1139820:CDS | 50.0% |
| ! | TGATGTCCTTCTGGTTGAGC+AGG | - | chr7_4:10536675-10536694 | Msa1139820:CDS | 50.0% |
| AGCTTCTGGTGAAGAAGGTG+TGG | - | chr7_4:10536795-10536814 | Msa1139820:CDS | 50.0% | |
| ACTAACGAGGAAGAGGATGC+AGG | - | chr7_4:10536829-10536848 | Msa1139820:CDS | 50.0% | |
| CAAAATCCTTTAGTGGCGGC+TGG | - | chr7_4:10536971-10536990 | Msa1139820:CDS | 50.0% | |
| AGCTAGAAGAACCGGGAACA+AGG | - | chr7_4:10537305-10537324 | Msa1139820:CDS | 50.0% | |
| !! | GGGAAAGGGAAAGGTTGATG+AGG | - | chr7_4:10537395-10537414 | Msa1139820:CDS | 50.0% |
| TGAGGATGAGACCCAAGTAG+AGG | - | chr7_4:10537413-10537432 | Msa1139820:CDS | 50.0% | |
| !! | TAGAGGTACCACACAAGTGG+AGG | - | chr7_4:10537430-10537449 | Msa1139820:CDS | 50.0% |
| !! | AGAGGTACCACACAAGTGGA+GGG | - | chr7_4:10537431-10537450 | Msa1139820:CDS | 50.0% |
| CTTCAGTTACCCAAACCGAG+AGG | - | chr7_4:10537527-10537546 | Msa1139820:CDS | 50.0% | |
| GGACTCGTGTTGCCATTGTT+GGG | - | chr7_4:10537589-10537608 | Msa1139820:CDS | 50.0% | |
| GTTGCCATTGTTGGGCCTAA+TGG | - | chr7_4:10537597-10537616 | Msa1139820:CDS | 50.0% | |
| AGCACCATTAGGCCCAACAA+TGG | + | chr7_4:10537604-10537623 | None:intergenic | 50.0% | |
| ATTGTTGGGCCTAATGGTGC+TGG | - | chr7_4:10537603-10537622 | Msa1139820:CDS | 50.0% | |
| GAGGCTGTTCGTGCAAAACT+TGG | - | chr7_4:10537810-10537829 | Msa1139820:CDS | 50.0% | |
| TATCAGGAGGGCAGAAAGCT+CGG | - | chr7_4:10537880-10537899 | Msa1139820:CDS | 50.0% | |
| GATGCGCTGGATGAATTCAC+TGG | - | chr7_4:10537999-10538018 | Msa1139820:CDS | 50.0% | |
| GGCACTGTCAGAAATTTCCC+TGG | - | chr7_4:10538110-10538129 | Msa1139820:CDS | 50.0% | |
| TCTGTCTCTGCCATGTTGGC+AGG | - | chr7_4:10536130-10536149 | Msa1139820:CDS | 55.0% | |
| CTCTGCCATGTTGGCAGGTA+TGG | - | chr7_4:10536135-10536154 | Msa1139820:CDS | 55.0% | |
| ! | GAAGCTTTCGGGGGAGGTTT+TGG | + | chr7_4:10536208-10536227 | None:intergenic | 55.0% |
| TATGCAGAAGCTTTCGGGGG+AGG | + | chr7_4:10536214-10536233 | None:intergenic | 55.0% | |
| ! | GCCCGATTTGAAGCCACTTG+AGG | - | chr7_4:10536303-10536322 | Msa1139820:CDS | 55.0% |
| !! | AGTCGAGCTTCGGTGCTTGA+TGG | - | chr7_4:10536451-10536470 | Msa1139820:CDS | 55.0% |
| ! | TGTCCTTCTGGTTGAGCAGG+AGG | - | chr7_4:10536678-10536697 | Msa1139820:CDS | 55.0% |
| CTACCTCCTGCTCAACCAGA+AGG | + | chr7_4:10536684-10536703 | None:intergenic | 55.0% | |
| CTGGTTGAGCAGGAGGTAGT+TGG | - | chr7_4:10536685-10536704 | Msa1139820:CDS | 55.0% | |
| AATCCTTTAGTGGCGGCTGG+AGG | - | chr7_4:10536974-10536993 | Msa1139820:CDS | 55.0% | |
| TTGACCTGAGGGCTGTTCTG+TGG | - | chr7_4:10537070-10537089 | Msa1139820:CDS | 55.0% | |
| CTAACCACAGAACAGCCCTC+AGG | + | chr7_4:10537077-10537096 | None:intergenic | 55.0% | |
| GAGGGCTGTTCTGTGGTTAG+AGG | - | chr7_4:10537077-10537096 | Msa1139820:CDS | 55.0% | |
| CTGTAGTCCCTCCACTTGTG+TGG | + | chr7_4:10537441-10537460 | None:intergenic | 55.0% | |
| GGGACTCGTGTTGCCATTGT+TGG | - | chr7_4:10537588-10537607 | Msa1139820:CDS | 55.0% | |
| GGTCTGGATGGAGACGAAGA+AGG | + | chr7_4:10537770-10537789 | None:intergenic | 55.0% | |
| TCTTCGTCTCCATCCAGACC+AGG | - | chr7_4:10537770-10537789 | Msa1139820:CDS | 55.0% | |
| TTACTAAGCCCCTCCTGGTC+TGG | + | chr7_4:10537786-10537805 | None:intergenic | 55.0% | |
| CTTGCTTACTAAGCCCCTCC+TGG | + | chr7_4:10537791-10537810 | None:intergenic | 55.0% | |
| GGAGGGGCTTAGTAAGCAAG+AGG | - | chr7_4:10537791-10537810 | Msa1139820:CDS | 55.0% | |
| ATCAGGAGGGCAGAAAGCTC+GGG | - | chr7_4:10537881-10537900 | Msa1139820:CDS | 55.0% | |
| !! | TGATGCATTGGCTGATGCGC+TGG | - | chr7_4:10537986-10538005 | Msa1139820:CDS | 55.0% |
| GCGCTGGATGAATTCACTGG+TGG | - | chr7_4:10538002-10538021 | Msa1139820:CDS | 55.0% | |
| TCTGTCTCTGCCATGTTGGC+AGG | - | chr7_4:10536130-10536149 | Msa1139820:CDS | 55.0% | |
| CTCTGCCATGTTGGCAGGTA+TGG | - | chr7_4:10536135-10536154 | Msa1139820:CDS | 55.0% | |
| ! | GAAGCTTTCGGGGGAGGTTT+TGG | + | chr7_4:10536208-10536227 | None:intergenic | 55.0% |
| TATGCAGAAGCTTTCGGGGG+AGG | + | chr7_4:10536214-10536233 | None:intergenic | 55.0% | |
| ! | GCCCGATTTGAAGCCACTTG+AGG | - | chr7_4:10536303-10536322 | Msa1139820:CDS | 55.0% |
| !! | AGTCGAGCTTCGGTGCTTGA+TGG | - | chr7_4:10536451-10536470 | Msa1139820:CDS | 55.0% |
| ! | TGTCCTTCTGGTTGAGCAGG+AGG | - | chr7_4:10536678-10536697 | Msa1139820:CDS | 55.0% |
| CTACCTCCTGCTCAACCAGA+AGG | + | chr7_4:10536684-10536703 | None:intergenic | 55.0% | |
| CTGGTTGAGCAGGAGGTAGT+TGG | - | chr7_4:10536685-10536704 | Msa1139820:CDS | 55.0% | |
| AATCCTTTAGTGGCGGCTGG+AGG | - | chr7_4:10536974-10536993 | Msa1139820:CDS | 55.0% | |
| TTGACCTGAGGGCTGTTCTG+TGG | - | chr7_4:10537070-10537089 | Msa1139820:CDS | 55.0% | |
| CTAACCACAGAACAGCCCTC+AGG | + | chr7_4:10537077-10537096 | None:intergenic | 55.0% | |
| GAGGGCTGTTCTGTGGTTAG+AGG | - | chr7_4:10537077-10537096 | Msa1139820:CDS | 55.0% | |
| CTGTAGTCCCTCCACTTGTG+TGG | + | chr7_4:10537441-10537460 | None:intergenic | 55.0% | |
| GGGACTCGTGTTGCCATTGT+TGG | - | chr7_4:10537588-10537607 | Msa1139820:CDS | 55.0% | |
| GGTCTGGATGGAGACGAAGA+AGG | + | chr7_4:10537770-10537789 | None:intergenic | 55.0% | |
| TCTTCGTCTCCATCCAGACC+AGG | - | chr7_4:10537770-10537789 | Msa1139820:CDS | 55.0% | |
| TTACTAAGCCCCTCCTGGTC+TGG | + | chr7_4:10537786-10537805 | None:intergenic | 55.0% | |
| CTTGCTTACTAAGCCCCTCC+TGG | + | chr7_4:10537791-10537810 | None:intergenic | 55.0% | |
| GGAGGGGCTTAGTAAGCAAG+AGG | - | chr7_4:10537791-10537810 | Msa1139820:CDS | 55.0% | |
| ATCAGGAGGGCAGAAAGCTC+GGG | - | chr7_4:10537881-10537900 | Msa1139820:CDS | 55.0% | |
| !! | TGATGCATTGGCTGATGCGC+TGG | - | chr7_4:10537986-10538005 | Msa1139820:CDS | 55.0% |
| GCGCTGGATGAATTCACTGG+TGG | - | chr7_4:10538002-10538021 | Msa1139820:CDS | 55.0% | |
| AGCTGCCCATGTGGCTGAAC+AGG | - | chr7_4:10536375-10536394 | Msa1139820:CDS | 60.0% | |
| CATCCTCCAGCCGCCACTAA+AGG | + | chr7_4:10536980-10536999 | None:intergenic | 60.0% | |
| CAAGTGGAGGGACTACAGCG+TGG | - | chr7_4:10537443-10537462 | Msa1139820:CDS | 60.0% | |
| TCGTCTCCATCCAGACCAGG+AGG | - | chr7_4:10537773-10537792 | Msa1139820:CDS | 60.0% | |
| CGTCTCCATCCAGACCAGGA+GGG | - | chr7_4:10537774-10537793 | Msa1139820:CDS | 60.0% | |
| GTCTCCATCCAGACCAGGAG+GGG | - | chr7_4:10537775-10537794 | Msa1139820:CDS | 60.0% | |
| TAAGCCCCTCCTGGTCTGGA+TGG | + | chr7_4:10537782-10537801 | None:intergenic | 60.0% | |
| AGCTGCCCATGTGGCTGAAC+AGG | - | chr7_4:10536375-10536394 | Msa1139820:CDS | 60.0% | |
| CATCCTCCAGCCGCCACTAA+AGG | + | chr7_4:10536980-10536999 | None:intergenic | 60.0% | |
| CAAGTGGAGGGACTACAGCG+TGG | - | chr7_4:10537443-10537462 | Msa1139820:CDS | 60.0% | |
| TCGTCTCCATCCAGACCAGG+AGG | - | chr7_4:10537773-10537792 | Msa1139820:CDS | 60.0% | |
| CGTCTCCATCCAGACCAGGA+GGG | - | chr7_4:10537774-10537793 | Msa1139820:CDS | 60.0% | |
| GTCTCCATCCAGACCAGGAG+GGG | - | chr7_4:10537775-10537794 | Msa1139820:CDS | 60.0% | |
| TAAGCCCCTCCTGGTCTGGA+TGG | + | chr7_4:10537782-10537801 | None:intergenic | 60.0% | |
| AGGAGGGCAGAAAGCTCGGG+TGG | - | chr7_4:10537884-10537903 | Msa1139820:CDS | 65.0% | |
| AGGAGGGCAGAAAGCTCGGG+TGG | - | chr7_4:10537884-10537903 | Msa1139820:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 10536046 | 10538193 | 10536046 | ID=Msa1139820;Name=Msa1139820 |
| chr7_4 | mRNA | 10536046 | 10538193 | 10536046 | ID=Msa1139820-mRNA-1;Parent=Msa1139820;Name=Msa1139820-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|-1|0|1|-1|1|1|0|715 |
| chr7_4 | exon | 10536046 | 10538193 | 10536046 | ID=Msa1139820-mRNA-1:exon:2590;Parent=Msa1139820-mRNA-1 |
| chr7_4 | CDS | 10536046 | 10538193 | 10536046 | ID=Msa1139820-mRNA-1:cds;Parent=Msa1139820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
