AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1140350


Find 271 sgRNAs with CRISPR-Local

Find 789 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr7_4 gene 11898638 11910833 11898638 ID=Msa1140350;Name=Msa1140350
chr7_4 mRNA 11898638 11910833 11898638 ID=Msa1140350-mRNA-1;Parent=Msa1140350;Name=Msa1140350-mRNA-1;_AED=0.19;_eAED=0.19;_QI=202|0.78|0.87|0.95|1|1|24|0|1063
chr7_4 exon 11898638 11898765 11898638 ID=Msa1140350-mRNA-1:exon:2868;Parent=Msa1140350-mRNA-1
chr7_4 exon 11898935 11899037 11898935 ID=Msa1140350-mRNA-1:exon:2867;Parent=Msa1140350-mRNA-1
chr7_4 exon 11899539 11899634 11899539 ID=Msa1140350-mRNA-1:exon:2866;Parent=Msa1140350-mRNA-1
chr7_4 exon 11900083 11900160 11900083 ID=Msa1140350-mRNA-1:exon:2865;Parent=Msa1140350-mRNA-1
chr7_4 exon 11900251 11900312 11900251 ID=Msa1140350-mRNA-1:exon:2864;Parent=Msa1140350-mRNA-1
chr7_4 exon 11900480 11900764 11900480 ID=Msa1140350-mRNA-1:exon:2863;Parent=Msa1140350-mRNA-1
chr7_4 exon 11900978 11901070 11900978 ID=Msa1140350-mRNA-1:exon:2862;Parent=Msa1140350-mRNA-1
chr7_4 exon 11902406 11902598 11902406 ID=Msa1140350-mRNA-1:exon:2861;Parent=Msa1140350-mRNA-1
chr7_4 exon 11902743 11902811 11902743 ID=Msa1140350-mRNA-1:exon:2860;Parent=Msa1140350-mRNA-1
chr7_4 exon 11903188 11903244 11903188 ID=Msa1140350-mRNA-1:exon:2859;Parent=Msa1140350-mRNA-1
chr7_4 exon 11903467 11903528 11903467 ID=Msa1140350-mRNA-1:exon:2858;Parent=Msa1140350-mRNA-1
chr7_4 exon 11903605 11903670 11903605 ID=Msa1140350-mRNA-1:exon:2857;Parent=Msa1140350-mRNA-1
chr7_4 exon 11903746 11903857 11903746 ID=Msa1140350-mRNA-1:exon:2856;Parent=Msa1140350-mRNA-1
chr7_4 exon 11904292 11904423 11904292 ID=Msa1140350-mRNA-1:exon:2855;Parent=Msa1140350-mRNA-1
chr7_4 exon 11904891 11905013 11904891 ID=Msa1140350-mRNA-1:exon:2854;Parent=Msa1140350-mRNA-1
chr7_4 exon 11906359 11906456 11906359 ID=Msa1140350-mRNA-1:exon:2853;Parent=Msa1140350-mRNA-1
chr7_4 exon 11906638 11906730 11906638 ID=Msa1140350-mRNA-1:exon:2852;Parent=Msa1140350-mRNA-1
chr7_4 exon 11907389 11907585 11907389 ID=Msa1140350-mRNA-1:exon:2851;Parent=Msa1140350-mRNA-1
chr7_4 exon 11907855 11907959 11907855 ID=Msa1140350-mRNA-1:exon:2850;Parent=Msa1140350-mRNA-1
chr7_4 exon 11908056 11908179 11908056 ID=Msa1140350-mRNA-1:exon:2849;Parent=Msa1140350-mRNA-1
chr7_4 exon 11908577 11908799 11908577 ID=Msa1140350-mRNA-1:exon:2848;Parent=Msa1140350-mRNA-1
chr7_4 exon 11908938 11909012 11908938 ID=Msa1140350-mRNA-1:exon:2847;Parent=Msa1140350-mRNA-1
chr7_4 exon 11909291 11909342 11909291 ID=Msa1140350-mRNA-1:exon:2846;Parent=Msa1140350-mRNA-1
chr7_4 exon 11910066 11910833 11910066 ID=Msa1140350-mRNA-1:exon:2845;Parent=Msa1140350-mRNA-1
chr7_4 five_prime_UTR 11910632 11910833 11910632 ID=Msa1140350-mRNA-1:five_prime_utr;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11910066 11910631 11910066 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11909291 11909342 11909291 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11908938 11909012 11908938 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11908577 11908799 11908577 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11908056 11908179 11908056 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11907855 11907959 11907855 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11907389 11907585 11907389 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11906638 11906730 11906638 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11906359 11906456 11906359 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11904891 11905013 11904891 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11904292 11904423 11904292 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11903746 11903857 11903746 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11903605 11903670 11903605 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11903467 11903528 11903467 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11903188 11903244 11903188 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11902743 11902811 11902743 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11902406 11902598 11902406 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11900978 11901070 11900978 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11900480 11900764 11900480 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11900251 11900312 11900251 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11900083 11900160 11900083 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11899539 11899634 11899539 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11898935 11899037 11898935 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
chr7_4 CDS 11898638 11898765 11898638 ID=Msa1140350-mRNA-1:cds;Parent=Msa1140350-mRNA-1
Gene Sequence

>Msa1140350

ATGGCGCTTCCTCCACAACCCGAATCCAACAATGGAGGAATTGTCGCCAACGCCACCGAAGAAACCGACGGAACTCCCATTCGATACCTTCCTCTCGATCATCTCTACTCCGCTACATCACCTTGTAGCGGTTCATCCAATGTCATGTCAAAAAAAGTTAAAGCACGAAAACTCACCAACAACAACAACGAAGACAACGAGATTCAGTTCAGTAATGGTGAAATCGATGATTCACCGATTGAAATTGAGAAAACCATGTCGAAGATGACGTTGTTTTCTGTGGAGGATTTTCCAAAACCGCCGCTTTTGTTTGTTTACACGCGCCGGCGACGGAAGAGAAGTTCAATTGAAGTTGATTGTGAAAGGACGGCGTTGAAGAGGAGGAGAATTGGGAGTAATGAGTTGGAGGGATTAGGGATTGATTTGAATTTGATTGGGAAAATTGATGATGGACCTGGATTGAGAAAATGTCGAAATCAAATTGGGAATTTTTCTGAGAATTGTGATTCTGTTGCTAAGAATTCAAAGTTGGTGCCTGAATCTTACACATTGAAGAGATGGGTCGCGTTGAGTTTTGATGATGCCAATCCGGAGGCTTTTGTTGGATTGAAATGCAAGGTTTACTGGCCTATGGATTTAAAATCATACACTGGCCTTGTCAAAAGTTACGACAGGGAAGCTAAGATACATCATATCGAGTATGATGATGGAGAAGAGGAAAATTTAATTCTTTCAAATGAAAATGTAAAATACCATGTTTCCCGTAACGACATGGAACGTTTAAAATTGAGTTACGCCAAAGTTCATGACAATAATGTCTCTGATTATAATGTTGAAGAGATGCTCGCATTGGCTGCAAGTATGAATGATTGTCAAGACTTTGAGCCCGGGGATATAGTATGGGCCAAGCTTACAGGTTATGCTATGTGGCCAGCAGTTGTTCTGGATGAATCACTTGCTAGCAGCTGTAAGGGTTTAAAAACTTTCGTAGGGGGGAGATCAGTTCCTGTCCAATTTTTTGGCACCCATGACTTTGCAAGAGTTCGAGTGCAACAGGTGAAATCATTTCTCAGTGGACTTCTAACAGATCTACACTCGAAGTGCAAGAAACCTAGTTTCATTGAAGGTTTAGAAGAGGCAAAAAGGTATCTAAGCGCACAGAAGCTTCCTTTGGAGATGATAGAATTGAGGAAAAGATATGACTGTAACAATGTAAGTGGAGAGGATGGAGGATGTTCAGATTCGGGTGAAGACTATGTAAGTGACAAAGGGACTTGGGCAGCACTTCAAAAGATCGACACCTTTCCTTATGAAGTGGGAGATTTGCAAATTCTAAGCCTTGGAAAGGTAGTTGGAGATTCTACAGCTTTTCGGGATGGAAGATCCATCTGGCCTGAAGGGTACACAGCAGTGAGGATGTTCACTTCAGTTACTGACCCTGAAGTATCTGTCCCTTATAAGATGGAGGTTTTGAGAGATCCAGAATCCAGATTCAGACCACTATTTAGAGTGACAGTTGATGGTGGTGAGCAGGATAAAGAATTGAAAAAGGCTGTTTCTGAAGGTTCTGTTGTTGACAGCGCGGTAGAAAGTGGCTATGAATCCGGCTCTGATATGTTTGGTTTCTCCAATCCTGATGTGGCTAAACTGATAAAGGGATTATCTAAATCCAAAGTCTCTTCGAAGAAATCAATTTGCAAGTCAGGTTCCAGATTACCTGTCGGTTATAGGCAGGTTCATATTAATTGGTTTGATCTCGATAAGTGCAATGTGTGCCATATGGATGAGGTCCATGCTAGATGCTATGGAGAACATGAACCTGTTAATGGAGTGCTATGGTTATGCAACTTATGTCGCTCGGGTGCTCCTCCCCCACCTTGTTGCTTATGTCCACTCATAGGTGGTGCAATGAAGCCTACAACGGATGGCCGATGGGCTCATTTGGCTTGTGCCATGTGGATACCTGAAACTTGCTTAGCTGATGTCAAGAGAATGGAGCCTATTGATGGTTTGAGGAGAATCAGTAAGGACCGTTGGAAGTTGTTATGCAGCATATGTGGTGTATCTTATGGTGCTTGCATCCAATGTTCAAACAATTCTTGTCGAGTAGCATATCATCCACTCTGTGCACGTGCAGCTGGTCTTTGTGTTGAGCTTGAGAACGAGGACAGGCTCTACCTACTTTCTGTAGACGACGATGAGGATCAGTGCATTCGCTTACTTTCTTTCTGCAAGAAACATAGGCAGCCATCTCATGATCATTCTGTTGCCGATGAACGTGTCCAGGTTATTGGTCAATGTTCAGACTATGAACCACCACCCAATCCATCTGGGTGTGCCCGAAGTGACAACACTGCTACTGTGTTGAGGTGTTACTGCTTCCTCGCCCCTATTGTTCATTGCTTGGGGATGGAAGGTGAATTGGAATATTGGATGGTGGAACCATATGATTACTTTGGTAGGAGAGGCCGAAAAGAACCTGAAGCACTTGCAGCTTCATCGCTGAAACGTTTATTTGTGGAGAATCAACCTTACTTAGTTGGTGGATACTGCCAACATGGATTGTTGAACGACCCAGAGCCTTCTGGCAGAGGAGTCTGCTCAAAATTCTTTTGTAGTGAACAAAGGCTGAGAACCTCTATGGTTGATGCTGCAGACAGCATACTTACTGTTGCCGAGAAATATAAGTACATGAGGGAAACTTTTCGGAAACAGTTGGCTTTTGGGAAATCAAGAATTCATGGATTTGGTATCTTTGCAAAGCATCCATATAAAGGTGGAGACATGGTGATTGAATACACTGGTGAACTTTTTAGACCTCCTATAGCTGACCGGAGAGAGCGTTTTATATACAATTCTTTGGTGGGTGCTGGAACATATATGTTTCGGATTGATGATGAACGAGTCATTGATGCCACTAGAGCAGGAAGCATTGCTCATTTAATTAATCATTCCTGTGCGCCAAATTGCTATTCAAGAGTCATTAGTGTTAACGGCGATGAGCATATTATAATATTTGCCAAGAGGGACATTAAACAATGGAAGAGCTCACATATGATTATAGATGAGCGGCTTTCTTGTTACTGTGGCTTCCCAAAATGTCGAGGTGTAGTAAATGATACTGAGGCAGAAGAGCGAGCTGGTACCCGATATGCACCACGAAGTGAATTAGTAGATTGGAAAGGAGAATGA

Protein sequence

>Msa1140350

MALPPQPESNNGGIVANATEETDGTPIRYLPLDHLYSATSPCSGSSNVMSKKVKARKLTNNNNEDNEIQFSNGEIDDSPIEIEKTMSKMTLFSVEDFPKPPLLFVYTRRRRKRSSIEVDCERTALKRRRIGSNELEGLGIDLNLIGKIDDGPGLRKCRNQIGNFSENCDSVAKNSKLVPESYTLKRWVALSFDDANPEAFVGLKCKVYWPMDLKSYTGLVKSYDREAKIHHIEYDDGEEENLILSNENVKYHVSRNDMERLKLSYAKVHDNNVSDYNVEEMLALAASMNDCQDFEPGDIVWAKLTGYAMWPAVVLDESLASSCKGLKTFVGGRSVPVQFFGTHDFARVRVQQVKSFLSGLLTDLHSKCKKPSFIEGLEEAKRYLSAQKLPLEMIELRKRYDCNNVSGEDGGCSDSGEDYVSDKGTWAALQKIDTFPYEVGDLQILSLGKVVGDSTAFRDGRSIWPEGYTAVRMFTSVTDPEVSVPYKMEVLRDPESRFRPLFRVTVDGGEQDKELKKAVSEGSVVDSAVESGYESGSDMFGFSNPDVAKLIKGLSKSKVSSKKSICKSGSRLPVGYRQVHINWFDLDKCNVCHMDEVHARCYGEHEPVNGVLWLCNLCRSGAPPPPCCLCPLIGGAMKPTTDGRWAHLACAMWIPETCLADVKRMEPIDGLRRISKDRWKLLCSICGVSYGACIQCSNNSCRVAYHPLCARAAGLCVELENEDRLYLLSVDDDEDQCIRLLSFCKKHRQPSHDHSVADERVQVIGQCSDYEPPPNPSGCARSDNTATVLRCYCFLAPIVHCLGMEGELEYWMVEPYDYFGRRGRKEPEALAASSLKRLFVENQPYLVGGYCQHGLLNDPEPSGRGVCSKFFCSEQRLRTSMVDAADSILTVAEKYKYMRETFRKQLAFGKSRIHGFGIFAKHPYKGGDMVIEYTGELFRPPIADRRERFIYNSLVGAGTYMFRIDDERVIDATRAGSIAHLINHSCAPNCYSRVISVNGDEHIIIFAKRDIKQWKSSHMIIDERLSCYCGFPKCRGVVNDTEAEERAGTRYAPRSELVDWKGE*