Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145820 | XP_003625427.1 | 96.104 | 385 | 8 | 1 | 38 | 422 | 3 | 380 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145820 | sp|P80572|ADHX_PEA | 93.229 | 384 | 19 | 1 | 39 | 422 | 1 | 377 | 0.0 | 733 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145820 | G7KYI4 | 96.104 | 385 | 8 | 1 | 38 | 422 | 3 | 380 | 0.0 | 759 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1037110 | Msa1145820 | 0.940882 | 1.088258e-100 | -8.615850e-47 |
| Msa1123150 | Msa1145820 | 0.969900 | 8.302762e-131 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145820 | MtrunA17_Chr7g0262421 | 96.104 | 385 | 8 | 1 | 38 | 422 | 3 | 380 | 0.0 | 759 |
| Msa1145820 | MtrunA17_Chr1g0183131 | 89.844 | 384 | 32 | 1 | 39 | 422 | 2 | 378 | 0.0 | 714 |
| Msa1145820 | MtrunA17_Chr3g0125911 | 58.182 | 385 | 154 | 1 | 37 | 421 | 1 | 378 | 1.31e-166 | 473 |
| Msa1145820 | MtrunA17_Chr3g0125961 | 56.883 | 385 | 159 | 1 | 37 | 421 | 1 | 378 | 4.04e-165 | 469 |
| Msa1145820 | MtrunA17_Chr3g0125941 | 56.919 | 383 | 158 | 1 | 39 | 421 | 4 | 379 | 3.82e-161 | 459 |
| Msa1145820 | MtrunA17_Chr6g0478081 | 51.979 | 379 | 171 | 3 | 43 | 421 | 8 | 375 | 3.47e-139 | 402 |
| Msa1145820 | MtrunA17_Chr7g0242291 | 51.145 | 393 | 173 | 7 | 37 | 421 | 12 | 393 | 4.23e-130 | 380 |
| Msa1145820 | MtrunA17_Chr5g0440521 | 48.285 | 379 | 187 | 3 | 43 | 419 | 16 | 387 | 9.27e-123 | 361 |
| Msa1145820 | MtrunA17_Chr3g0118441 | 45.669 | 381 | 198 | 3 | 41 | 419 | 9 | 382 | 2.56e-118 | 350 |
| Msa1145820 | MtrunA17_Chr3g0132351 | 46.494 | 385 | 193 | 5 | 42 | 421 | 13 | 389 | 2.21e-110 | 330 |
| Msa1145820 | MtrunA17_Chr4g0021211 | 38.849 | 417 | 224 | 6 | 8 | 421 | 10 | 398 | 7.61e-99 | 300 |
| Msa1145820 | MtrunA17_Chr7g0242301 | 44.658 | 365 | 158 | 5 | 61 | 421 | 1 | 325 | 1.99e-98 | 297 |
| Msa1145820 | MtrunA17_Chr5g0419681 | 42.119 | 387 | 206 | 7 | 39 | 421 | 2 | 374 | 1.77e-97 | 296 |
| Msa1145820 | MtrunA17_Chr3g0118431 | 45.324 | 278 | 143 | 3 | 137 | 412 | 19 | 289 | 1.35e-79 | 247 |
| Msa1145820 | MtrunA17_Chr8g0385221 | 30.667 | 375 | 237 | 10 | 48 | 413 | 55 | 415 | 1.82e-44 | 160 |
| Msa1145820 | MtrunA17_Chr6g0474141 | 25.479 | 365 | 222 | 12 | 59 | 412 | 27 | 352 | 8.00e-21 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145820 | AT5G43940.1 | 87.664 | 381 | 40 | 1 | 39 | 419 | 2 | 375 | 0.0 | 696 |
| Msa1145820 | AT5G43940.2 | 84.733 | 393 | 41 | 2 | 39 | 419 | 2 | 387 | 0.0 | 687 |
| Msa1145820 | AT1G77120.1 | 58.225 | 383 | 153 | 1 | 39 | 421 | 2 | 377 | 5.09e-165 | 469 |
| Msa1145820 | AT5G24760.1 | 52.493 | 381 | 170 | 3 | 41 | 421 | 10 | 379 | 6.74e-142 | 410 |
| Msa1145820 | AT1G32780.1 | 49.873 | 395 | 181 | 3 | 37 | 421 | 1 | 388 | 1.48e-137 | 399 |
| Msa1145820 | AT1G64710.1 | 49.479 | 384 | 184 | 3 | 41 | 421 | 4 | 380 | 2.00e-134 | 391 |
| Msa1145820 | AT5G24760.2 | 51.801 | 361 | 163 | 3 | 61 | 421 | 1 | 350 | 1.07e-131 | 383 |
| Msa1145820 | AT5G24760.3 | 51.801 | 361 | 163 | 3 | 61 | 421 | 1 | 350 | 1.07e-131 | 383 |
| Msa1145820 | AT1G64710.2 | 48.352 | 364 | 178 | 3 | 61 | 421 | 1 | 357 | 5.94e-124 | 363 |
| Msa1145820 | AT5G42250.1 | 46.825 | 378 | 191 | 4 | 45 | 419 | 17 | 387 | 5.81e-121 | 357 |
| Msa1145820 | AT1G22430.2 | 48.964 | 386 | 187 | 4 | 37 | 419 | 6 | 384 | 9.92e-119 | 351 |
| Msa1145820 | AT1G22430.1 | 48.964 | 386 | 187 | 4 | 37 | 419 | 6 | 384 | 9.92e-119 | 351 |
| Msa1145820 | AT4G22110.2 | 46.292 | 391 | 199 | 5 | 36 | 422 | 5 | 388 | 2.49e-112 | 335 |
| Msa1145820 | AT4G22110.1 | 46.292 | 391 | 199 | 5 | 36 | 422 | 5 | 388 | 2.49e-112 | 335 |
| Msa1145820 | AT1G22440.1 | 45.758 | 389 | 200 | 5 | 35 | 419 | 1 | 382 | 2.11e-110 | 330 |
| Msa1145820 | AT1G64710.3 | 46.645 | 313 | 158 | 2 | 111 | 421 | 6 | 311 | 3.26e-101 | 304 |
| Msa1145820 | AT5G24760.4 | 53.053 | 262 | 116 | 1 | 160 | 421 | 11 | 265 | 8.40e-95 | 286 |
| Msa1145820 | AT1G22430.3 | 51.049 | 286 | 137 | 3 | 37 | 319 | 6 | 291 | 1.30e-89 | 274 |
| Msa1145820 | AT1G22430.4 | 50.769 | 260 | 125 | 3 | 37 | 293 | 6 | 265 | 1.70e-77 | 242 |
| Msa1145820 | AT1G22430.5 | 50.769 | 260 | 125 | 3 | 37 | 293 | 6 | 265 | 1.70e-77 | 242 |
| Msa1145820 | AT4G22110.3 | 49.200 | 250 | 124 | 3 | 36 | 282 | 5 | 254 | 1.53e-74 | 234 |
| Msa1145820 | AT5G63620.2 | 28.723 | 376 | 243 | 12 | 48 | 413 | 57 | 417 | 7.38e-41 | 150 |
| Msa1145820 | AT5G63620.1 | 28.191 | 376 | 245 | 12 | 48 | 413 | 57 | 417 | 6.52e-39 | 145 |
| Msa1145820 | AT5G63620.3 | 31.276 | 243 | 156 | 5 | 48 | 282 | 57 | 296 | 1.08e-32 | 126 |
| Msa1145820 | AT5G51970.1 | 26.420 | 352 | 209 | 14 | 72 | 412 | 42 | 354 | 2.15e-19 | 89.7 |
| Msa1145820 | AT5G51970.2 | 26.420 | 352 | 209 | 14 | 72 | 412 | 42 | 354 | 2.15e-19 | 89.7 |
| Msa1145820 | AT1G72680.1 | 25.291 | 344 | 217 | 9 | 37 | 375 | 1 | 309 | 1.33e-12 | 68.9 |
Find 108 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGACAAAGTTTGTCTTCT+TGG | 0.193840 | 7_4:+22737440 | Msa1145820:CDS |
| ATTGGTTTCTCATGGTCTTT+TGG | 0.194774 | 7_4:-22738734 | None:intergenic |
| TCTCCGCTAAAGTCAAATTA+TGG | 0.217372 | 7_4:-22739251 | None:intergenic |
| AGTTCCCATAAAATGGTAAA+TGG | 0.225093 | 7_4:-22737351 | None:intergenic |
| CTCAACATCTTCAATTGTTA+AGG | 0.275629 | 7_4:-22736241 | None:intergenic |
| GCTGGTGCATCACGGATTAT+TGG | 0.295634 | 7_4:+22738233 | Msa1145820:CDS |
| TTCGTGCTGCTACTGGCGTT+GGG | 0.315089 | 7_4:+22737282 | Msa1145820:CDS |
| AAGTAGAAGTTCCCATAAAA+TGG | 0.320212 | 7_4:-22737358 | None:intergenic |
| GCCACAGAGATTTGTCTTGC+CGG | 0.334965 | 7_4:-22737255 | None:intergenic |
| TTCAATTGTTAAGGGTTTGT+TGG | 0.337800 | 7_4:-22736232 | None:intergenic |
| GTTGTGGGTGTTGCTGCGTC+AGG | 0.359777 | 7_4:+22738986 | Msa1145820:CDS |
| TCAGCTATAACCTGCTGAAT+TGG | 0.367592 | 7_4:-22738752 | None:intergenic |
| GATTCATCCAGATGCTGCTT+TGG | 0.372772 | 7_4:+22737421 | Msa1145820:CDS |
| ATTCTCGGTCACGAAGCTGC+TGG | 0.374371 | 7_4:+22736375 | Msa1145820:CDS |
| TCAATTGTTAAGGGTTTGTT+GGG | 0.377880 | 7_4:-22736231 | None:intergenic |
| CGCCCTTTCCAGTTGGTGAC+TGG | 0.378615 | 7_4:+22739025 | Msa1145820:CDS |
| GTTCGTGCTGCTACTGGCGT+TGG | 0.380505 | 7_4:+22737281 | Msa1145820:CDS |
| TGAATGAAGCTGCGGTGGCC+TGG | 0.381173 | 7_4:+22736205 | Msa1145820:intron |
| ATGCAAGGGAAAAGGCCTTC+AGG | 0.381857 | 7_4:-22736354 | None:intergenic |
| CTCTGTGATGAGATCTGCTT+TGG | 0.384012 | 7_4:+22738823 | Msa1145820:CDS |
| TCAACATCTTCAATTGTTAA+GGG | 0.384108 | 7_4:-22736240 | None:intergenic |
| GGCAAGGTTCGTGCTGCTAC+TGG | 0.388221 | 7_4:+22737275 | Msa1145820:CDS |
| GTATGGAAAGGAACAGCTTT+TGG | 0.394778 | 7_4:+22739052 | Msa1145820:CDS |
| CGGTGAAGAGGATTTGAATT+CGG | 0.405830 | 7_4:-22736290 | None:intergenic |
| TAAGGGTTTGTTGGGTTCCC+AGG | 0.410463 | 7_4:-22736223 | None:intergenic |
| TAAATAAATCTTATAATTTG+TGG | 0.412843 | 7_4:-22735943 | None:intergenic |
| CAAAGACCTTCAAATCAGAT+TGG | 0.418869 | 7_4:-22739468 | None:intergenic |
| TTCTCGGTCACGAAGCTGCT+GGG | 0.424830 | 7_4:+22736376 | Msa1145820:CDS |
| TTTAATTATTATTAGGATTG+TGG | 0.424925 | 7_4:+22737139 | Msa1145820:intron |
| ACTTTGTCCAAAGCAGCATC+TGG | 0.429710 | 7_4:-22737428 | None:intergenic |
| ATTGCATTGATGAAGTGATT+TGG | 0.430112 | 7_4:+22739329 | Msa1145820:exon |
| TTATAGGCCTCGGAGCTGTC+TGG | 0.430268 | 7_4:+22738038 | Msa1145820:intron |
| CTCCGCTAAAGTCAAATTAT+GGG | 0.432578 | 7_4:-22739250 | None:intergenic |
| GATAGCAACAAGTTTGATAC+AGG | 0.435981 | 7_4:+22738266 | Msa1145820:CDS |
| TGGTCCAACATTGATACCTT+GGG | 0.437794 | 7_4:+22739349 | Msa1145820:three_prime_UTR |
| GTTCCCATAAAATGGTAAAT+GGG | 0.438294 | 7_4:-22737350 | None:intergenic |
| CTTGGATGTGGTGTTCCAAC+CGG | 0.441210 | 7_4:+22737458 | Msa1145820:CDS |
| ATCTCAATGGCATCGATTCA+AGG | 0.454210 | 7_4:+22736070 | Msa1145820:CDS |
| GAATGAAGCTGCGGTGGCCT+GGG | 0.455751 | 7_4:+22736206 | Msa1145820:intron |
| GGTATTCCAATCTGATTTGA+AGG | 0.457669 | 7_4:+22739462 | Msa1145820:three_prime_UTR |
| CCACATTCAGCTTGGTAACA+TGG | 0.464387 | 7_4:-22737212 | None:intergenic |
| TACCCATAATTTGACTTTAG+CGG | 0.464557 | 7_4:+22739248 | Msa1145820:CDS |
| GGTGTGACTGATGTGAAGCC+TGG | 0.466044 | 7_4:+22737176 | Msa1145820:CDS |
| TTGGTCCAACATTGATACCT+TGG | 0.471108 | 7_4:+22739348 | Msa1145820:three_prime_UTR |
| GACCGAGAATGCAAGGGAAA+AGG | 0.476008 | 7_4:-22736362 | None:intergenic |
| AAAGTTTGTCTTCTTGGATG+TGG | 0.477160 | 7_4:+22737446 | Msa1145820:CDS |
| ATACACGTCCAGTCACCAAC+TGG | 0.479066 | 7_4:-22739033 | None:intergenic |
| GATTATAGCTTTGAGTGCAT+TGG | 0.483054 | 7_4:+22738794 | Msa1145820:CDS |
| ATTAGGATTGTGGAAAGTGT+TGG | 0.485003 | 7_4:+22737149 | Msa1145820:intron |
| AACACTGCAAAAGTTGAGCC+AGG | 0.490878 | 7_4:+22738061 | Msa1145820:CDS |
| TACATTCTCCACATTCAGCT+TGG | 0.499906 | 7_4:-22737220 | None:intergenic |
| AGAGCAGGTCACAAGTGCCT+TGG | 0.501613 | 7_4:+22739083 | Msa1145820:CDS |
| GTCCAGTCACCAACTGGAAA+GGG | 0.510627 | 7_4:-22739027 | None:intergenic |
| TGTTGAAAAGTACTTGAAGA+AGG | 0.512474 | 7_4:+22739108 | Msa1145820:CDS |
| CCTGCTGAATTGGTTTCTCA+TGG | 0.516766 | 7_4:-22738742 | None:intergenic |
| AGTTGGTGACTGGACGTGTA+TGG | 0.521766 | 7_4:+22739035 | Msa1145820:CDS |
| CAATCACACAACACAAGCTC+AGG | 0.522033 | 7_4:-22735976 | None:intergenic |
| GGGTGTTGCTGCGTCAGGGC+AGG | 0.523431 | 7_4:+22738991 | Msa1145820:CDS |
| GTCACACCGATGCTTATACT+TGG | 0.524051 | 7_4:+22736319 | Msa1145820:CDS |
| CGGACTTCGTTGGCTTGCGG+AGG | 0.527112 | 7_4:-22736270 | None:intergenic |
| GTTATAGCTGATCTAACTGA+TGG | 0.527317 | 7_4:+22738764 | Msa1145820:CDS |
| AATCTCATATCTCATCTCAA+TGG | 0.538846 | 7_4:+22736057 | Msa1145820:CDS |
| GCTTCGTGACCGAGAATGCA+AGG | 0.541786 | 7_4:-22736369 | None:intergenic |
| GCAGAGGGTGCAAAATCTGC+TGG | 0.545748 | 7_4:+22738215 | Msa1145820:CDS |
| CGTCCAGTCACCAACTGGAA+AGG | 0.546725 | 7_4:-22739028 | None:intergenic |
| TTGTGGGTGTTGCTGCGTCA+GGG | 0.547804 | 7_4:+22738987 | Msa1145820:CDS |
| CCATGAGAAACCAATTCAGC+AGG | 0.552655 | 7_4:+22738742 | Msa1145820:CDS |
| CATGGAATCACATGATCCCC+AGG | 0.555800 | 7_4:-22737194 | None:intergenic |
| ATTCGGACTTCGTTGGCTTG+CGG | 0.559898 | 7_4:-22736273 | None:intergenic |
| GATTTGAATTCGGACTTCGT+TGG | 0.560485 | 7_4:-22736280 | None:intergenic |
| GTGTGACTGATGTGAAGCCT+GGG | 0.566279 | 7_4:+22737177 | Msa1145820:CDS |
| GCAACCCAAGGTATCAATGT+TGG | 0.567152 | 7_4:-22739353 | None:intergenic |
| CTTAACAATTGAAGATGTTG+AGG | 0.570529 | 7_4:+22736242 | Msa1145820:CDS |
| AGATGATATGGTTTATAATG+TGG | 0.571313 | 7_4:+22739437 | Msa1145820:three_prime_UTR |
| ACTTAATAATGAAACAGCAA+TGG | 0.571420 | 7_4:-22738873 | None:intergenic |
| ATCAACTCGCCCTTTCCAGT+TGG | 0.573452 | 7_4:+22739018 | Msa1145820:CDS |
| TGCTTTGGAATGCTGCCACA+AGG | 0.577392 | 7_4:+22738838 | Msa1145820:CDS |
| GGTCAAGTCATTACATGCAA+AGG | 0.582229 | 7_4:+22736091 | Msa1145820:CDS |
| TGTGACAGAGAGCGGTGAAG+AGG | 0.584807 | 7_4:-22736302 | None:intergenic |
| TCGTGCTGCTACTGGCGTTG+GGG | 0.591817 | 7_4:+22737283 | Msa1145820:CDS |
| ATAAATCTTATAATTTGTGG+TGG | 0.595433 | 7_4:-22735940 | None:intergenic |
| TGATGAATGATCGTAAGCCT+CGG | 0.600310 | 7_4:+22737309 | Msa1145820:CDS |
| CAAAATCTGCTGGTGCATCA+CGG | 0.607340 | 7_4:+22738225 | Msa1145820:CDS |
| CAGCAAGCCCAACAGTTCCA+AGG | 0.607697 | 7_4:-22738105 | None:intergenic |
| GCCACTCCAAGTATAAGCAT+CGG | 0.609211 | 7_4:-22736325 | None:intergenic |
| AAGGCCGAAAATAGCAACAA+TGG | 0.611082 | 7_4:-22738086 | None:intergenic |
| CCATGTTACCAAGCTGAATG+TGG | 0.612881 | 7_4:+22737212 | Msa1145820:CDS |
| TATACTTGACAGGTAGCAGA+GGG | 0.616742 | 7_4:+22738200 | Msa1145820:intron |
| GATATGGTTTATAATGTGGA+CGG | 0.618954 | 7_4:+22739441 | Msa1145820:three_prime_UTR |
| CAAGACAAATCTCTGTGGCA+AGG | 0.620524 | 7_4:+22737259 | Msa1145820:CDS |
| GACTTTAGCGGAGATCAACA+AGG | 0.621716 | 7_4:+22739260 | Msa1145820:CDS |
| ACCGATGCTTATACTTGGAG+TGG | 0.624702 | 7_4:+22736324 | Msa1145820:CDS |
| AAGAAGAAAACAGCAACCCA+AGG | 0.629460 | 7_4:-22739365 | None:intergenic |
| AGCATCGGTGTGACAGAGAG+CGG | 0.630661 | 7_4:-22736310 | None:intergenic |
| ATAGCTGATCTAACTGATGG+AGG | 0.636448 | 7_4:+22738767 | Msa1145820:CDS |
| TGGAGTGGCAAAGATCCTGA+AGG | 0.647068 | 7_4:+22736339 | Msa1145820:CDS |
| ACACTGCAAAAGTTGAGCCA+GGG | 0.647796 | 7_4:+22738062 | Msa1145820:CDS |
| AAAATAGCAACAATGGACCC+TGG | 0.653155 | 7_4:-22738079 | None:intergenic |
| CTTCGTGACCGAGAATGCAA+GGG | 0.658568 | 7_4:-22736368 | None:intergenic |
| TGGAAGCAGCATTAACCTTG+TGG | 0.658972 | 7_4:-22738853 | None:intergenic |
| TTATACTTGACAGGTAGCAG+AGG | 0.660854 | 7_4:+22738199 | Msa1145820:intron |
| ATTGTGGAAAGTGTTGGAGA+AGG | 0.699217 | 7_4:+22737155 | Msa1145820:CDS |
| GTGACTGGACGTGTATGGAA+AGG | 0.712282 | 7_4:+22739040 | Msa1145820:CDS |
| CAGTGTTCCAGACAGCTCCG+AGG | 0.713764 | 7_4:-22738045 | None:intergenic |
| TTTCCCTTGATAGAAAACCG+AGG | 0.725431 | 7_4:-22737326 | None:intergenic |
| TCCGGCAAGACAAATCTCTG+TGG | 0.728628 | 7_4:+22737254 | Msa1145820:CDS |
| TTGCAGTTAAATAATCCGAG+TGG | 0.749333 | 7_4:+22739397 | Msa1145820:three_prime_UTR |
| TGTGACTGATGTGAAGCCTG+GGG | 0.752837 | 7_4:+22737178 | Msa1145820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTAATTATTATT+AGG | + | chr7_4:22737132-22737151 | Msa1145820:intron | 0.0% |
| !! | TAAATAAATCTTATAATTTG+TGG | - | chr7_4:22735946-22735965 | None:intergenic | 10.0% |
| !!! | TATTTTTATTACTTTATTAG+GGG | + | chr7_4:22736469-22736488 | Msa1145820:intron | 10.0% |
| !! | AAGAAATATAATAACTAATA+TGG | - | chr7_4:22737928-22737947 | None:intergenic | 10.0% |
| !! | AATACAACAATATATAACAA+GGG | - | chr7_4:22736870-22736889 | None:intergenic | 15.0% |
| !! | TTTAATTATTATTAGGATTG+TGG | + | chr7_4:22737139-22737158 | Msa1145820:intron | 15.0% |
| !!! | ATAAATCTTATAATTTGTGG+TGG | - | chr7_4:22735943-22735962 | None:intergenic | 20.0% |
| !! | TATAAGAGAAACTATTAACA+AGG | + | chr7_4:22736724-22736743 | Msa1145820:intron | 20.0% |
| !!! | TTAATGAGTTGATACAAATA+TGG | + | chr7_4:22736756-22736775 | Msa1145820:intron | 20.0% |
| !! | GAATACAACAATATATAACA+AGG | - | chr7_4:22736871-22736890 | None:intergenic | 20.0% |
| !! | CATTCATTATAAATGCAAAA+TGG | + | chr7_4:22736892-22736911 | Msa1145820:intron | 20.0% |
| !! | TGCATATAGTATTAATTAGA+TGG | + | chr7_4:22736936-22736955 | Msa1145820:intron | 20.0% |
| !! | TATTAATTAGATGGTACAAT+TGG | + | chr7_4:22736945-22736964 | Msa1145820:intron | 20.0% |
| !!! | CATTTTTATGATGTACTATA+CGG | - | chr7_4:22737769-22737788 | None:intergenic | 20.0% |
| !!! | TTTTTTTCCTTTCACTTTAT+AGG | + | chr7_4:22738022-22738041 | Msa1145820:intron | 20.0% |
| !! | ATTCATAATTTATACTTGAC+AGG | + | chr7_4:22738190-22738209 | Msa1145820:intron | 20.0% |
| !! | TGAGAAAAGAAAAACAATAA+GGG | - | chr7_4:22738518-22738537 | None:intergenic | 20.0% |
| !! | ATGAGAAAAGAAAAACAATA+AGG | - | chr7_4:22738519-22738538 | None:intergenic | 20.0% |
| !!! | CAAATTTTTAAATATTCCAC+TGG | + | chr7_4:22738896-22738915 | Msa1145820:intron | 20.0% |
| !!! | ATTCTTTGTTTTAAATTTCC+AGG | + | chr7_4:22738946-22738965 | Msa1145820:intron | 20.0% |
| !!! | TTCTTTGTTTTAAATTTCCA+GGG | + | chr7_4:22738947-22738966 | Msa1145820:intron | 20.0% |
| !! | ACAATCTTATATTCATACAT+TGG | - | chr7_4:22739157-22739176 | None:intergenic | 20.0% |
| !! | ATGTATGAATATAAGATTGT+TGG | + | chr7_4:22739157-22739176 | Msa1145820:intron | 20.0% |
| !!! | AATATAAGATTGTTGGTAAA+TGG | + | chr7_4:22739164-22739183 | Msa1145820:intron | 20.0% |
| ! | TCAACATCTTCAATTGTTAA+GGG | - | chr7_4:22736243-22736262 | None:intergenic | 25.0% |
| !!! | TAAATTTTCTCAAGTTGTGT+TGG | + | chr7_4:22736565-22736584 | Msa1145820:intron | 25.0% |
| ! | CAAAATGGAAGATATTGAAT+CGG | + | chr7_4:22736907-22736926 | Msa1145820:intron | 25.0% |
| ! | AAAATGGAAGATATTGAATC+GGG | + | chr7_4:22736908-22736927 | Msa1145820:intron | 25.0% |
| !! | TTAGAACTTCTTTTTGCAAA+TGG | + | chr7_4:22737015-22737034 | Msa1145820:intron | 25.0% |
| !! | TAGAACTTCTTTTTGCAAAT+GGG | + | chr7_4:22737016-22737035 | Msa1145820:intron | 25.0% |
| !! | ACATTCACTTAACTTGATTA+TGG | + | chr7_4:22737097-22737116 | Msa1145820:intron | 25.0% |
| !! | AAAACCCATTTACCATTTTA+TGG | + | chr7_4:22737346-22737365 | Msa1145820:CDS | 25.0% |
| !! | AAACCCATTTACCATTTTAT+GGG | + | chr7_4:22737347-22737366 | Msa1145820:CDS | 25.0% |
| ! | ATAAGACACTAACAGAAAAT+AGG | - | chr7_4:22737502-22737521 | None:intergenic | 25.0% |
| !! | ATTTTCTGTTAGTGTCTTAT+AGG | + | chr7_4:22737502-22737521 | Msa1145820:intron | 25.0% |
| !!! | GTTTTTTGAGTTATATGTGT+AGG | + | chr7_4:22737541-22737560 | Msa1145820:intron | 25.0% |
| ! | ACTTCAATAGCATTAAGAAA+GGG | - | chr7_4:22737818-22737837 | None:intergenic | 25.0% |
| ! | TTCACAAAAACAAGTGAATT+GGG | - | chr7_4:22737987-22738006 | None:intergenic | 25.0% |
| ! | ATTCACAAAAACAAGTGAAT+TGG | - | chr7_4:22737988-22738007 | None:intergenic | 25.0% |
| ! | ACATAACTAAGAATCGAAAA+GGG | - | chr7_4:22738362-22738381 | None:intergenic | 25.0% |
| ! | AACATAACTAAGAATCGAAA+AGG | - | chr7_4:22738363-22738382 | None:intergenic | 25.0% |
| ! | CAAATAATATGACTATCACT+CGG | + | chr7_4:22738397-22738416 | Msa1145820:intron | 25.0% |
| ! | AGACAGTTATGTATAACTAT+AGG | - | chr7_4:22738561-22738580 | None:intergenic | 25.0% |
| ! | ACTTAATAATGAAACAGCAA+TGG | - | chr7_4:22738876-22738895 | None:intergenic | 25.0% |
| ! | CTTATATTCATACATTGGAT+TGG | - | chr7_4:22739152-22739171 | None:intergenic | 25.0% |
| ! | GTTTGTAAAAACAGATGATA+TGG | + | chr7_4:22739425-22739444 | Msa1145820:three_prime_UTR | 25.0% |
| ! | AGATGATATGGTTTATAATG+TGG | + | chr7_4:22739437-22739456 | Msa1145820:three_prime_UTR | 25.0% |
| !!! | AAACATCCTTTTTTGAGTTA+TGG | + | chr7_4:22739499-22739518 | Msa1145820:three_prime_UTR | 25.0% |
| !!! | AACATCCTTTTTTGAGTTAT+GGG | + | chr7_4:22739500-22739519 | Msa1145820:three_prime_UTR | 25.0% |
| AATCTCATATCTCATCTCAA+TGG | + | chr7_4:22736057-22736076 | Msa1145820:CDS | 30.0% | |
| ! | TCAATTGTTAAGGGTTTGTT+GGG | - | chr7_4:22736234-22736253 | None:intergenic | 30.0% |
| TTCAATTGTTAAGGGTTTGT+TGG | - | chr7_4:22736235-22736254 | None:intergenic | 30.0% | |
| CTCAACATCTTCAATTGTTA+AGG | - | chr7_4:22736244-22736263 | None:intergenic | 30.0% | |
| CTTAACAATTGAAGATGTTG+AGG | + | chr7_4:22736242-22736261 | Msa1145820:CDS | 30.0% | |
| ACATGATAACATTAGAACTG+TGG | + | chr7_4:22736604-22736623 | Msa1145820:intron | 30.0% | |
| AATGTAATACTTTACTCCCT+CGG | - | chr7_4:22737062-22737081 | None:intergenic | 30.0% | |
| ! | GAATGTAAGTTTTGCAAATC+CGG | + | chr7_4:22737236-22737255 | Msa1145820:CDS | 30.0% |
| GTTCCCATAAAATGGTAAAT+GGG | - | chr7_4:22737353-22737372 | None:intergenic | 30.0% | |
| AGTTCCCATAAAATGGTAAA+TGG | - | chr7_4:22737354-22737373 | None:intergenic | 30.0% | |
| AAGTAGAAGTTCCCATAAAA+TGG | - | chr7_4:22737361-22737380 | None:intergenic | 30.0% | |
| GATAATGTTCAAGAGTTTAC+CGG | - | chr7_4:22737480-22737499 | None:intergenic | 30.0% | |
| CAATGATTTAAATGTACCCA+TGG | + | chr7_4:22737633-22737652 | Msa1145820:intron | 30.0% | |
| AAGAAAGGGAAGAAAACAAA+AGG | - | chr7_4:22737804-22737823 | None:intergenic | 30.0% | |
| GACTTCAATAGCATTAAGAA+AGG | - | chr7_4:22737819-22737838 | None:intergenic | 30.0% | |
| TAGTATTAAGTCCACACTTT+GGG | - | chr7_4:22737844-22737863 | None:intergenic | 30.0% | |
| TTAGTATTAAGTCCACACTT+TGG | - | chr7_4:22737845-22737864 | None:intergenic | 30.0% | |
| TGTGGACTTAATACTAATGT+TGG | + | chr7_4:22737848-22737867 | Msa1145820:intron | 30.0% | |
| ! | AGCTTGTTTATCTAATAACC+TGG | + | chr7_4:22738298-22738317 | Msa1145820:intron | 30.0% |
| ACATTATAAACACATTGTCC+AGG | - | chr7_4:22738319-22738338 | None:intergenic | 30.0% | |
| !! | AATGTTGTGAAGTGTTTTGT+TGG | + | chr7_4:22738334-22738353 | Msa1145820:intron | 30.0% |
| CGAGTGATAGTCATATTATT+TGG | - | chr7_4:22738399-22738418 | None:intergenic | 30.0% | |
| ATCATCGTCTTCGTTTATAT+AGG | - | chr7_4:22738434-22738453 | None:intergenic | 30.0% | |
| !!! | TTGTTTTAAATTTCCAGGGA+TGG | + | chr7_4:22738951-22738970 | Msa1145820:intron | 30.0% |
| !! | TGTTTTAAATTTCCAGGGAT+GGG | + | chr7_4:22738952-22738971 | Msa1145820:intron | 30.0% |
| !! | TGTTGAAAAGTACTTGAAGA+AGG | + | chr7_4:22739108-22739127 | Msa1145820:CDS | 30.0% |
| ! | AAAGTACTTGAAGAAGGTAA+TGG | + | chr7_4:22739114-22739133 | Msa1145820:intron | 30.0% |
| ! | TACCCATAATTTGACTTTAG+CGG | + | chr7_4:22739248-22739267 | Msa1145820:CDS | 30.0% |
| ! | CTTTTGATCTTATGCATGAA+GGG | + | chr7_4:22739283-22739302 | Msa1145820:CDS | 30.0% |
| ! | ATTGCATTGATGAAGTGATT+TGG | + | chr7_4:22739329-22739348 | Msa1145820:exon | 30.0% |
| GATATGGTTTATAATGTGGA+CGG | + | chr7_4:22739441-22739460 | Msa1145820:three_prime_UTR | 30.0% | |
| CATAACCCATAACTCAAAAA+AGG | - | chr7_4:22739508-22739527 | None:intergenic | 30.0% | |
| AGAATTGAGAATTGAGAGTG+AGG | - | chr7_4:22736022-22736041 | None:intergenic | 35.0% | |
| GGGGATATTGTTGAAATTGT+TGG | + | chr7_4:22736488-22736507 | Msa1145820:intron | 35.0% | |
| !! | TCTCAAGTTGTGTTGGATTT+TGG | + | chr7_4:22736572-22736591 | Msa1145820:intron | 35.0% |
| GATAACATTAGAACTGTGGA+TGG | + | chr7_4:22736608-22736627 | Msa1145820:intron | 35.0% | |
| ! | TGATGATGAAAACTAGACTC+AGG | + | chr7_4:22736640-22736659 | Msa1145820:intron | 35.0% |
| ! | ATTAGGATTGTGGAAAGTGT+TGG | + | chr7_4:22737149-22737168 | Msa1145820:intron | 35.0% |
| TTGGACAAAGTTTGTCTTCT+TGG | + | chr7_4:22737440-22737459 | Msa1145820:CDS | 35.0% | |
| AAAGTTTGTCTTCTTGGATG+TGG | + | chr7_4:22737446-22737465 | Msa1145820:CDS | 35.0% | |
| GTGATGATATACATCTCCAT+GGG | - | chr7_4:22737652-22737671 | None:intergenic | 35.0% | |
| AGTGATGATATACATCTCCA+TGG | - | chr7_4:22737653-22737672 | None:intergenic | 35.0% | |
| GTGTCATACACTTATCTGAT+TGG | + | chr7_4:22737679-22737698 | Msa1145820:intron | 35.0% | |
| CATTACAAAGTGCATGATCA+TGG | - | chr7_4:22737731-22737750 | None:intergenic | 35.0% | |
| CAGATAATGACAACATGTTG+AGG | - | chr7_4:22737951-22737970 | None:intergenic | 35.0% | |
| AAAACAAGTGAATTGGGTCA+AGG | - | chr7_4:22737981-22738000 | None:intergenic | 35.0% | |
| GATAGCAACAAGTTTGATAC+AGG | + | chr7_4:22738266-22738285 | Msa1145820:CDS | 35.0% | |
| ATAAACGAAGACGATGATGA+CGG | + | chr7_4:22738436-22738455 | Msa1145820:intron | 35.0% | |
| !!! | GTTTGTTGTTTTCTCAGTCT+TGG | + | chr7_4:22738599-22738618 | Msa1145820:intron | 35.0% |
| TACATTGCAGCCAAAAACTT+TGG | + | chr7_4:22738692-22738711 | Msa1145820:intron | 35.0% | |
| !! | ATTGGTTTCTCATGGTCTTT+TGG | - | chr7_4:22738737-22738756 | None:intergenic | 35.0% |
| GTTATAGCTGATCTAACTGA+TGG | + | chr7_4:22738764-22738783 | Msa1145820:CDS | 35.0% | |
| !! | GATTATAGCTTTGAGTGCAT+TGG | + | chr7_4:22738794-22738813 | Msa1145820:CDS | 35.0% |
| TTAAATATTCCACTGGTGAC+TGG | + | chr7_4:22738903-22738922 | Msa1145820:intron | 35.0% | |
| !! | GTTTTAAATTTCCAGGGATG+GGG | + | chr7_4:22738953-22738972 | Msa1145820:intron | 35.0% |
| ! | TTTTAAATTTCCAGGGATGG+GGG | + | chr7_4:22738954-22738973 | Msa1145820:intron | 35.0% |
| ! | AAGTACTTTTCAACAAGCCA+AGG | - | chr7_4:22739103-22739122 | None:intergenic | 35.0% |
| ! | TGTTGGTAAATGGTAACACA+AGG | + | chr7_4:22739174-22739193 | Msa1145820:intron | 35.0% |
| !! | AGTATACTTTCTGCTTTTGC+AGG | + | chr7_4:22739203-22739222 | Msa1145820:intron | 35.0% |
| CTCCGCTAAAGTCAAATTAT+GGG | - | chr7_4:22739253-22739272 | None:intergenic | 35.0% | |
| TCTCCGCTAAAGTCAAATTA+TGG | - | chr7_4:22739254-22739273 | None:intergenic | 35.0% | |
| ! | GCTTTTGATCTTATGCATGA+AGG | + | chr7_4:22739282-22739301 | Msa1145820:CDS | 35.0% |
| !!! | GTTGCTGTTTTCTTCTTCTA+TGG | + | chr7_4:22739371-22739390 | Msa1145820:three_prime_UTR | 35.0% |
| TTGCAGTTAAATAATCCGAG+TGG | + | chr7_4:22739397-22739416 | Msa1145820:three_prime_UTR | 35.0% | |
| ! | TTTTACAAACTACAGCCACT+CGG | - | chr7_4:22739415-22739434 | None:intergenic | 35.0% |
| ! | GGTATTCCAATCTGATTTGA+AGG | + | chr7_4:22739462-22739481 | Msa1145820:three_prime_UTR | 35.0% |
| CAAAGACCTTCAAATCAGAT+TGG | - | chr7_4:22739471-22739490 | None:intergenic | 35.0% | |
| !! | ATCTCAATGGCATCGATTCA+AGG | + | chr7_4:22736070-22736089 | Msa1145820:CDS | 40.0% |
| GGTCAAGTCATTACATGCAA+AGG | + | chr7_4:22736091-22736110 | Msa1145820:CDS | 40.0% | |
| GATTTGAATTCGGACTTCGT+TGG | - | chr7_4:22736283-22736302 | None:intergenic | 40.0% | |
| CGGTGAAGAGGATTTGAATT+CGG | - | chr7_4:22736293-22736312 | None:intergenic | 40.0% | |
| TGATGAAAACTAGACTCAGG+TGG | + | chr7_4:22736643-22736662 | Msa1145820:intron | 40.0% | |
| AAAACTAGACTCAGGTGGTT+TGG | + | chr7_4:22736648-22736667 | Msa1145820:intron | 40.0% | |
| AAACTAGACTCAGGTGGTTT+GGG | + | chr7_4:22736649-22736668 | Msa1145820:intron | 40.0% | |
| TCGGCTACATGGATAAAATG+TGG | - | chr7_4:22736788-22736807 | None:intergenic | 40.0% | |
| ! | AAGTCTTGTCCCACTAAATG+GGG | - | chr7_4:22736811-22736830 | None:intergenic | 40.0% |
| ! | CAAGTCTTGTCCCACTAAAT+GGG | - | chr7_4:22736812-22736831 | None:intergenic | 40.0% |
| ! | TGCAAATGGGTCAGTCATTT+TGG | + | chr7_4:22737029-22737048 | Msa1145820:intron | 40.0% |
| !! | GCAAATGGGTCAGTCATTTT+GGG | + | chr7_4:22737030-22737049 | Msa1145820:intron | 40.0% |
| !! | ATTGTGGAAAGTGTTGGAGA+AGG | + | chr7_4:22737155-22737174 | Msa1145820:CDS | 40.0% |
| TACATTCTCCACATTCAGCT+TGG | - | chr7_4:22737223-22737242 | None:intergenic | 40.0% | |
| TGATGAATGATCGTAAGCCT+CGG | + | chr7_4:22737309-22737328 | Msa1145820:CDS | 40.0% | |
| ! | TAAGCCTCGGTTTTCTATCA+AGG | + | chr7_4:22737322-22737341 | Msa1145820:CDS | 40.0% |
| ! | AAGCCTCGGTTTTCTATCAA+GGG | + | chr7_4:22737323-22737342 | Msa1145820:CDS | 40.0% |
| TTTCCCTTGATAGAAAACCG+AGG | - | chr7_4:22737329-22737348 | None:intergenic | 40.0% | |
| ATGTTCAAGAGTTTACCGGT+TGG | - | chr7_4:22737476-22737495 | None:intergenic | 40.0% | |
| AATTATGCGCAGAGAGGATA+AGG | - | chr7_4:22737577-22737596 | None:intergenic | 40.0% | |
| ATGAATTCACGACGTGTGTT+TGG | + | chr7_4:22737605-22737624 | Msa1145820:intron | 40.0% | |
| CATGATCATGGTTAAGCAAC+AGG | - | chr7_4:22737719-22737738 | None:intergenic | 40.0% | |
| ATTGAAGTCTTCCCAAAGTG+TGG | + | chr7_4:22737830-22737849 | Msa1145820:intron | 40.0% | |
| TCCTTTCACTTTATAGGCCT+CGG | + | chr7_4:22738028-22738047 | Msa1145820:intron | 40.0% | |
| AAAATAGCAACAATGGACCC+TGG | - | chr7_4:22738082-22738101 | None:intergenic | 40.0% | |
| !!! | GGGTCCATTGTTGCTATTTT+CGG | + | chr7_4:22738082-22738101 | Msa1145820:CDS | 40.0% |
| AAGGCCGAAAATAGCAACAA+TGG | - | chr7_4:22738089-22738108 | None:intergenic | 40.0% | |
| !!! | ATTGTTGCTATTTTCGGCCT+TGG | + | chr7_4:22738088-22738107 | Msa1145820:CDS | 40.0% |
| TCATACAGTAGCACACAAAC+AGG | - | chr7_4:22738171-22738190 | None:intergenic | 40.0% | |
| TTATACTTGACAGGTAGCAG+AGG | + | chr7_4:22738199-22738218 | Msa1145820:intron | 40.0% | |
| TATACTTGACAGGTAGCAGA+GGG | + | chr7_4:22738200-22738219 | Msa1145820:intron | 40.0% | |
| ! | TTTCTCAGTCTTGGTTCTTG+TGG | + | chr7_4:22738608-22738627 | Msa1145820:intron | 40.0% |
| ! | AAGAATCTTTTGTAGCACCC+TGG | - | chr7_4:22738636-22738655 | None:intergenic | 40.0% |
| AAAGACAAGTGAGCAAGATC+AGG | - | chr7_4:22738664-22738683 | None:intergenic | 40.0% | |
| ! | CTCAGTGACTCCAAAGTTTT+TGG | - | chr7_4:22738705-22738724 | None:intergenic | 40.0% |
| TCAGCTATAACCTGCTGAAT+TGG | - | chr7_4:22738755-22738774 | None:intergenic | 40.0% | |
| ATAGCTGATCTAACTGATGG+AGG | + | chr7_4:22738767-22738786 | Msa1145820:CDS | 40.0% | |
| ! | GTATGGAAAGGAACAGCTTT+TGG | + | chr7_4:22739052-22739071 | Msa1145820:CDS | 40.0% |
| !! | TCTGCTTTTGCAGGAAATCA+AGG | + | chr7_4:22739212-22739231 | Msa1145820:intron | 40.0% |
| TTGGTCCAACATTGATACCT+TGG | + | chr7_4:22739348-22739367 | Msa1145820:three_prime_UTR | 40.0% | |
| TGGTCCAACATTGATACCTT+GGG | + | chr7_4:22739349-22739368 | Msa1145820:three_prime_UTR | 40.0% | |
| AAGAAGAAAACAGCAACCCA+AGG | - | chr7_4:22739368-22739387 | None:intergenic | 40.0% | |
| !! | GCTGTTTTCTTCTTCTATGG+CGG | + | chr7_4:22739374-22739393 | Msa1145820:three_prime_UTR | 40.0% |
| CAATCACACAACACAAGCTC+AGG | - | chr7_4:22735979-22735998 | None:intergenic | 45.0% | |
| CTGAGCTTGTGTTGTGTGAT+TGG | + | chr7_4:22735977-22735996 | Msa1145820:intron | 45.0% | |
| ! | TGATTGGCATTTTCCGTCTG+TGG | + | chr7_4:22735993-22736012 | Msa1145820:intron | 45.0% |
| ACGACGTCGTTGTAGAGTTA+GGG | - | chr7_4:22736183-22736202 | None:intergenic | 45.0% | |
| AACGACGTCGTTGTAGAGTT+AGG | - | chr7_4:22736184-22736203 | None:intergenic | 45.0% | |
| !! | CGTCGTTTTGAATGAAGCTG+CGG | + | chr7_4:22736197-22736216 | Msa1145820:intron | 45.0% |
| GTCACACCGATGCTTATACT+TGG | + | chr7_4:22736319-22736338 | Msa1145820:CDS | 45.0% | |
| ACCGATGCTTATACTTGGAG+TGG | + | chr7_4:22736324-22736343 | Msa1145820:CDS | 45.0% | |
| GCCACTCCAAGTATAAGCAT+CGG | - | chr7_4:22736328-22736347 | None:intergenic | 45.0% | |
| ATGTAGACAGAAGACCGGAA+GGG | + | chr7_4:22736673-22736692 | Msa1145820:intron | 45.0% | |
| ! | CCAAGTCTTGTCCCACTAAA+TGG | - | chr7_4:22736813-22736832 | None:intergenic | 45.0% |
| CCATTTAGTGGGACAAGACT+TGG | + | chr7_4:22736810-22736829 | Msa1145820:intron | 45.0% | |
| !! | ATGGGTCAGTCATTTTGGGT+TGG | + | chr7_4:22737034-22737053 | Msa1145820:intron | 45.0% |
| !!! | TCATTTTGGGTTGGATCCGA+GGG | + | chr7_4:22737043-22737062 | Msa1145820:intron | 45.0% |
| ! | CCACATTCAGCTTGGTAACA+TGG | - | chr7_4:22737215-22737234 | None:intergenic | 45.0% |
| CCATGTTACCAAGCTGAATG+TGG | + | chr7_4:22737212-22737231 | Msa1145820:CDS | 45.0% | |
| CAAGACAAATCTCTGTGGCA+AGG | + | chr7_4:22737259-22737278 | Msa1145820:CDS | 45.0% | |
| ! | GATTCATCCAGATGCTGCTT+TGG | + | chr7_4:22737421-22737440 | Msa1145820:CDS | 45.0% |
| ACTTTGTCCAAAGCAGCATC+TGG | - | chr7_4:22737431-22737450 | None:intergenic | 45.0% | |
| GTGACAAATTATGCGCAGAG+AGG | - | chr7_4:22737583-22737602 | None:intergenic | 45.0% | |
| ATTCACGACGTGTGTTTGGT+TGG | + | chr7_4:22737609-22737628 | Msa1145820:intron | 45.0% | |
| TTCACGACGTGTGTTTGGTT+GGG | + | chr7_4:22737610-22737629 | Msa1145820:intron | 45.0% | |
| TCCGAGGCCTATAAAGTGAA+AGG | - | chr7_4:22738032-22738051 | None:intergenic | 45.0% | |
| AACACTGCAAAAGTTGAGCC+AGG | + | chr7_4:22738061-22738080 | Msa1145820:CDS | 45.0% | |
| ACACTGCAAAAGTTGAGCCA+GGG | + | chr7_4:22738062-22738081 | Msa1145820:CDS | 45.0% | |
| ! | ATTTTCGGCCTTGGAACTGT+TGG | + | chr7_4:22738097-22738116 | Msa1145820:CDS | 45.0% |
| ! | TTTTCGGCCTTGGAACTGTT+GGG | + | chr7_4:22738098-22738117 | Msa1145820:CDS | 45.0% |
| CAAAATCTGCTGGTGCATCA+CGG | + | chr7_4:22738225-22738244 | Msa1145820:CDS | 45.0% | |
| ATAGGTCTAGACTCTGTCAC+AGG | - | chr7_4:22738543-22738562 | None:intergenic | 45.0% | |
| ! | CCTGCTGAATTGGTTTCTCA+TGG | - | chr7_4:22738745-22738764 | None:intergenic | 45.0% |
| CCATGAGAAACCAATTCAGC+AGG | + | chr7_4:22738742-22738761 | Msa1145820:CDS | 45.0% | |
| CTCTGTGATGAGATCTGCTT+TGG | + | chr7_4:22738823-22738842 | Msa1145820:CDS | 45.0% | |
| TGGAAGCAGCATTAACCTTG+TGG | - | chr7_4:22738856-22738875 | None:intergenic | 45.0% | |
| AATATTCCACTGGTGACTGG+TGG | + | chr7_4:22738906-22738925 | Msa1145820:intron | 45.0% | |
| ! | TGGAAAGGAACAGCTTTTGG+TGG | + | chr7_4:22739055-22739074 | Msa1145820:CDS | 45.0% |
| !!! | CTTTTGGTGGCTTTAAGAGC+AGG | + | chr7_4:22739068-22739087 | Msa1145820:CDS | 45.0% |
| GACTTTAGCGGAGATCAACA+AGG | + | chr7_4:22739260-22739279 | Msa1145820:CDS | 45.0% | |
| ! | GCAACCCAAGGTATCAATGT+TGG | - | chr7_4:22739356-22739375 | None:intergenic | 45.0% |
| !!! | TTTATTTTTATTACTTTATT+AGG | + | chr7_4:22736467-22736486 | Msa1145820:intron | 5.0% |
| !!! | TTATTTTTATTACTTTATTA+GGG | + | chr7_4:22736468-22736487 | Msa1145820:intron | 5.0% |
| !! | CGTTTTGAATGAAGCTGCGG+TGG | + | chr7_4:22736200-22736219 | Msa1145820:intron | 50.0% |
| !! | TAAGGGTTTGTTGGGTTCCC+AGG | - | chr7_4:22736226-22736245 | None:intergenic | 50.0% |
| !! | ATTCGGACTTCGTTGGCTTG+CGG | - | chr7_4:22736276-22736295 | None:intergenic | 50.0% |
| TGGAGTGGCAAAGATCCTGA+AGG | + | chr7_4:22736339-22736358 | Msa1145820:CDS | 50.0% | |
| ATGCAAGGGAAAAGGCCTTC+AGG | - | chr7_4:22736357-22736376 | None:intergenic | 50.0% | |
| ! | GGCCTTTTCCCTTGCATTCT+CGG | + | chr7_4:22736360-22736379 | Msa1145820:CDS | 50.0% |
| GACCGAGAATGCAAGGGAAA+AGG | - | chr7_4:22736365-22736384 | None:intergenic | 50.0% | |
| CTTCGTGACCGAGAATGCAA+GGG | - | chr7_4:22736371-22736390 | None:intergenic | 50.0% | |
| TGGGCATGTAGACAGAAGAC+CGG | + | chr7_4:22736668-22736687 | Msa1145820:intron | 50.0% | |
| CATGTAGACAGAAGACCGGA+AGG | + | chr7_4:22736672-22736691 | Msa1145820:intron | 50.0% | |
| TGTAGACAGAAGACCGGAAG+GGG | + | chr7_4:22736674-22736693 | Msa1145820:intron | 50.0% | |
| TCGTGATTTGACTCCCCTTC+CGG | - | chr7_4:22736690-22736709 | None:intergenic | 50.0% | |
| ACTAAATGGGGTCGGCTACA+TGG | - | chr7_4:22736799-22736818 | None:intergenic | 50.0% | |
| ATGTAGCCGACCCCATTTAG+TGG | + | chr7_4:22736798-22736817 | Msa1145820:intron | 50.0% | |
| TGTAGCCGACCCCATTTAGT+GGG | + | chr7_4:22736799-22736818 | Msa1145820:intron | 50.0% | |
| CTTGTCCCACTAAATGGGGT+CGG | - | chr7_4:22736807-22736826 | None:intergenic | 50.0% | |
| !!! | GTCATTTTGGGTTGGATCCG+AGG | + | chr7_4:22737042-22737061 | Msa1145820:intron | 50.0% |
| GTGTGACTGATGTGAAGCCT+GGG | + | chr7_4:22737177-22737196 | Msa1145820:CDS | 50.0% | |
| TGTGACTGATGTGAAGCCTG+GGG | + | chr7_4:22737178-22737197 | Msa1145820:CDS | 50.0% | |
| CATGGAATCACATGATCCCC+AGG | - | chr7_4:22737197-22737216 | None:intergenic | 50.0% | |
| TCCGGCAAGACAAATCTCTG+TGG | + | chr7_4:22737254-22737273 | Msa1145820:CDS | 50.0% | |
| GCCACAGAGATTTGTCTTGC+CGG | - | chr7_4:22737258-22737277 | None:intergenic | 50.0% | |
| CTTGGATGTGGTGTTCCAAC+CGG | + | chr7_4:22737458-22737477 | Msa1145820:CDS | 50.0% | |
| ! | GCTGGTGCATCACGGATTAT+TGG | + | chr7_4:22738233-22738252 | Msa1145820:CDS | 50.0% |
| !! | AGACGATGATGACGGCAGTA+TGG | + | chr7_4:22738444-22738463 | Msa1145820:intron | 50.0% |
| !! | ATGATGACGGCAGTATGGCA+TGG | + | chr7_4:22738449-22738468 | Msa1145820:intron | 50.0% |
| ! | TCTTGGTTCTTGTGGTGCCA+GGG | + | chr7_4:22738616-22738635 | Msa1145820:intron | 50.0% |
| !! | TGCTTTGGAATGCTGCCACA+AGG | + | chr7_4:22738838-22738857 | Msa1145820:CDS | 50.0% |
| ATGGGGGACATCAGTTGTTG+TGG | + | chr7_4:22738970-22738989 | Msa1145820:CDS | 50.0% | |
| TGGGGGACATCAGTTGTTGT+GGG | + | chr7_4:22738971-22738990 | Msa1145820:CDS | 50.0% | |
| ATCAACTCGCCCTTTCCAGT+TGG | + | chr7_4:22739018-22739037 | Msa1145820:CDS | 50.0% | |
| GTCCAGTCACCAACTGGAAA+GGG | - | chr7_4:22739030-22739049 | None:intergenic | 50.0% | |
| ATACACGTCCAGTCACCAAC+TGG | - | chr7_4:22739036-22739055 | None:intergenic | 50.0% | |
| !! | AGTTGGTGACTGGACGTGTA+TGG | + | chr7_4:22739035-22739054 | Msa1145820:CDS | 50.0% |
| GTGACTGGACGTGTATGGAA+AGG | + | chr7_4:22739040-22739059 | Msa1145820:CDS | 50.0% | |
| GAGAGTGAGGAGACCACAGA+CGG | - | chr7_4:22736009-22736028 | None:intergenic | 55.0% | |
| TGTGACAGAGAGCGGTGAAG+AGG | - | chr7_4:22736305-22736324 | None:intergenic | 55.0% | |
| !! | AGCATCGGTGTGACAGAGAG+CGG | - | chr7_4:22736313-22736332 | None:intergenic | 55.0% |
| GCTTCGTGACCGAGAATGCA+AGG | - | chr7_4:22736372-22736391 | None:intergenic | 55.0% | |
| ATTCTCGGTCACGAAGCTGC+TGG | + | chr7_4:22736375-22736394 | Msa1145820:CDS | 55.0% | |
| TTCTCGGTCACGAAGCTGCT+GGG | + | chr7_4:22736376-22736395 | Msa1145820:CDS | 55.0% | |
| GGTGTGACTGATGTGAAGCC+TGG | + | chr7_4:22737176-22737195 | Msa1145820:CDS | 55.0% | |
| ! | TTCGTGCTGCTACTGGCGTT+GGG | + | chr7_4:22737282-22737301 | Msa1145820:CDS | 55.0% |
| TTATAGGCCTCGGAGCTGTC+TGG | + | chr7_4:22738038-22738057 | Msa1145820:intron | 55.0% | |
| CAGCAAGCCCAACAGTTCCA+AGG | - | chr7_4:22738108-22738127 | None:intergenic | 55.0% | |
| ! | GCAGAGGGTGCAAAATCTGC+TGG | + | chr7_4:22738215-22738234 | Msa1145820:CDS | 55.0% |
| ! | GTCTTGGTTCTTGTGGTGCC+AGG | + | chr7_4:22738615-22738634 | Msa1145820:intron | 55.0% |
| !! | TTGTGGGTGTTGCTGCGTCA+GGG | + | chr7_4:22738987-22739006 | Msa1145820:CDS | 55.0% |
| CGTCCAGTCACCAACTGGAA+AGG | - | chr7_4:22739031-22739050 | None:intergenic | 55.0% | |
| AGAGCAGGTCACAAGTGCCT+TGG | + | chr7_4:22739083-22739102 | Msa1145820:CDS | 55.0% | |
| TGAATGAAGCTGCGGTGGCC+TGG | + | chr7_4:22736205-22736224 | Msa1145820:intron | 60.0% | |
| GAATGAAGCTGCGGTGGCCT+GGG | + | chr7_4:22736206-22736225 | Msa1145820:intron | 60.0% | |
| ! | GGCAAGGTTCGTGCTGCTAC+TGG | + | chr7_4:22737275-22737294 | Msa1145820:CDS | 60.0% |
| ! | GTTCGTGCTGCTACTGGCGT+TGG | + | chr7_4:22737281-22737300 | Msa1145820:CDS | 60.0% |
| ! | TCGTGCTGCTACTGGCGTTG+GGG | + | chr7_4:22737283-22737302 | Msa1145820:CDS | 60.0% |
| CAGTGTTCCAGACAGCTCCG+AGG | - | chr7_4:22738048-22738067 | None:intergenic | 60.0% | |
| GTACAGCCACCAGTCACCAG+TGG | - | chr7_4:22738915-22738934 | None:intergenic | 60.0% | |
| CAACTGATGTCCCCCATCCC+TGG | - | chr7_4:22738967-22738986 | None:intergenic | 60.0% | |
| !! | GTTGTGGGTGTTGCTGCGTC+AGG | + | chr7_4:22738986-22739005 | Msa1145820:CDS | 60.0% |
| !! | CGCCCTTTCCAGTTGGTGAC+TGG | + | chr7_4:22739025-22739044 | Msa1145820:CDS | 60.0% |
| !! | CGGACTTCGTTGGCTTGCGG+AGG | - | chr7_4:22736273-22736292 | None:intergenic | 65.0% |
| TCGGTCACGAAGCTGCTGGG+TGG | + | chr7_4:22736379-22736398 | Msa1145820:intron | 65.0% | |
| !! | GGGTGTTGCTGCGTCAGGGC+AGG | + | chr7_4:22738991-22739010 | Msa1145820:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 22735920 | 22739635 | 22735920 | ID=Msa1145820;Name=Msa1145820 |
| chr7_4 | mRNA | 22735920 | 22739635 | 22735920 | ID=Msa1145820-mRNA-1;Parent=Msa1145820;Name=Msa1145820-mRNA-1;_AED=0.06;_eAED=0.06;_QI=5|0.87|0.88|1|0.87|0.77|9|297|422 |
| chr7_4 | exon | 22735920 | 22735994 | 22735920 | ID=Msa1145820-mRNA-1:exon:5670;Parent=Msa1145820-mRNA-1 |
| chr7_4 | exon | 22736038 | 22736112 | 22736038 | ID=Msa1145820-mRNA-1:exon:5671;Parent=Msa1145820-mRNA-1 |
| chr7_4 | exon | 22736214 | 22736397 | 22736214 | ID=Msa1145820-mRNA-1:exon:5672;Parent=Msa1145820-mRNA-1 |
| chr7_4 | exon | 22737154 | 22737479 | 22737154 | ID=Msa1145820-mRNA-1:exon:5673;Parent=Msa1145820-mRNA-1 |
| chr7_4 | exon | 22738044 | 22738126 | 22738044 | ID=Msa1145820-mRNA-1:exon:5674;Parent=Msa1145820-mRNA-1 |
| chr7_4 | exon | 22738212 | 22738287 | 22738212 | ID=Msa1145820-mRNA-1:exon:5675;Parent=Msa1145820-mRNA-1 |
| chr7_4 | exon | 22738702 | 22738880 | 22738702 | ID=Msa1145820-mRNA-1:exon:5676;Parent=Msa1145820-mRNA-1 |
| chr7_4 | exon | 22738968 | 22739129 | 22738968 | ID=Msa1145820-mRNA-1:exon:5677;Parent=Msa1145820-mRNA-1 |
| chr7_4 | exon | 22739225 | 22739635 | 22739225 | ID=Msa1145820-mRNA-1:exon:5678;Parent=Msa1145820-mRNA-1 |
| chr7_4 | five_prime_UTR | 22735920 | 22735924 | 22735920 | ID=Msa1145820-mRNA-1:five_prime_utr;Parent=Msa1145820-mRNA-1 |
| chr7_4 | CDS | 22735925 | 22735994 | 22735925 | ID=Msa1145820-mRNA-1:cds;Parent=Msa1145820-mRNA-1 |
| chr7_4 | CDS | 22736038 | 22736112 | 22736038 | ID=Msa1145820-mRNA-1:cds;Parent=Msa1145820-mRNA-1 |
| chr7_4 | CDS | 22736214 | 22736397 | 22736214 | ID=Msa1145820-mRNA-1:cds;Parent=Msa1145820-mRNA-1 |
| chr7_4 | CDS | 22737154 | 22737479 | 22737154 | ID=Msa1145820-mRNA-1:cds;Parent=Msa1145820-mRNA-1 |
| chr7_4 | CDS | 22738044 | 22738126 | 22738044 | ID=Msa1145820-mRNA-1:cds;Parent=Msa1145820-mRNA-1 |
| chr7_4 | CDS | 22738212 | 22738287 | 22738212 | ID=Msa1145820-mRNA-1:cds;Parent=Msa1145820-mRNA-1 |
| chr7_4 | CDS | 22738702 | 22738880 | 22738702 | ID=Msa1145820-mRNA-1:cds;Parent=Msa1145820-mRNA-1 |
| chr7_4 | CDS | 22738968 | 22739129 | 22738968 | ID=Msa1145820-mRNA-1:cds;Parent=Msa1145820-mRNA-1 |
| chr7_4 | CDS | 22739225 | 22739338 | 22739225 | ID=Msa1145820-mRNA-1:cds;Parent=Msa1145820-mRNA-1 |
| chr7_4 | three_prime_UTR | 22739339 | 22739635 | 22739339 | ID=Msa1145820-mRNA-1:three_prime_utr;Parent=Msa1145820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
