AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1151630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1151630 MtrunA17_Chr7g0241481 62.121 66 16 2 1 59 3 66 2.08e-18 79.3
Msa1151630 MtrunA17_Chr7g0241441 58.333 60 19 3 1 59 1 55 6.91e-15 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 246 sgRNAs with CRISPR-Local

Find 440 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCACTTGCAATTGAAATT+TGG 0.097977 7_4:+36215831 None:intergenic
CGGACACACATTTAATTTAA+TGG 0.119807 7_4:-36219598 Msa1151630:CDS
CTCACTAATAATCAATTTAT+TGG 0.143898 7_4:-36216033 Msa1151630:three_prime_UTR
TGACCCTTCAAAATGATTAT+TGG 0.158313 7_4:+36215098 None:intergenic
GAAAATTGTGTGAACGAAAT+AGG 0.160475 7_4:+36215937 None:intergenic
TTTCCGTGGTTTAAGTAATT+TGG 0.178996 7_4:-36216438 Msa1151630:three_prime_UTR
TAAGATCAATGGAGATTAAT+TGG 0.197558 7_4:+36219552 None:intergenic
TCCAGCTACATTCTCCAATT+TGG 0.199506 7_4:-36214419 Msa1151630:three_prime_UTR
CTTAAGCTCCTTAGAGGTTT+TGG 0.208558 7_4:-36215355 Msa1151630:three_prime_UTR
TTCTGTACATCAATCCTTAT+TGG 0.208685 7_4:-36214045 Msa1151630:three_prime_UTR
CCATCTCCAGGTAAGTTATT+TGG 0.208909 7_4:+36215300 None:intergenic
CATTGGTGAATAAGAAAATT+TGG 0.220195 7_4:+36215769 None:intergenic
CACTTAGTTGATGAGGAATT+TGG 0.221854 7_4:+36214353 None:intergenic
TTAGATTTCAATATGATAAA+TGG 0.229182 7_4:-36217251 Msa1151630:three_prime_UTR
TTGAAAGGAAACGAGTTTAA+AGG 0.231142 7_4:-36217176 Msa1151630:three_prime_UTR
CTAAATTGTCCTTTCCATTC+AGG 0.232820 7_4:+36214274 None:intergenic
CTTCAGAATTGTTCCTTTGT+AGG 0.249539 7_4:-36215652 Msa1151630:three_prime_UTR
CTTCATCAATATGCCTTTAC+TGG 0.249931 7_4:-36219245 Msa1151630:three_prime_UTR
ATGTTTAGATGAACCAAATT+AGG 0.255966 7_4:+36215423 None:intergenic
ATCCCCACTGAATGTGCTTT+TGG 0.269119 7_4:+36214936 None:intergenic
ACTCTCTACTTGTACCAAAT+TGG 0.284169 7_4:+36214405 None:intergenic
TTATCACATAATAAGTTAAA+TGG 0.285779 7_4:-36214520 Msa1151630:three_prime_UTR
ACGAAATAGGGAATTCAAAT+TGG 0.288298 7_4:+36215950 None:intergenic
GGAGAGATATATCACAGATT+TGG 0.289445 7_4:-36214625 Msa1151630:three_prime_UTR
TGGGGAAATACCTAGATGTT+TGG 0.303667 7_4:-36214710 Msa1151630:three_prime_UTR
ATATATCTCTCCACCATATA+AGG 0.305278 7_4:+36214636 None:intergenic
CCTTCCTCGTTCAAGGCATT+TGG 0.305409 7_4:+36214154 None:intergenic
TCACTGAAACTTGTTCTATC+TGG 0.310265 7_4:+36214661 None:intergenic
TATGGGCTTTCCCATCTATT+AGG 0.312998 7_4:-36217208 Msa1151630:three_prime_UTR
AGCACTTGCAATTGAAATTT+GGG 0.313566 7_4:+36215832 None:intergenic
TCGAACCTTAAGTTCATCTA+TGG 0.320398 7_4:-36215907 Msa1151630:three_prime_UTR
GAACTTAAGGTTCGAATGAT+TGG 0.326555 7_4:+36215915 None:intergenic
AATCAATTTATTGGTAATAT+AGG 0.327758 7_4:-36216024 Msa1151630:three_prime_UTR
TTGTGCAGGGTTGAACAATT+TGG 0.329213 7_4:-36219052 Msa1151630:intron
GCAATCTACATGAGTGGTTA+TGG 0.329368 7_4:-36217226 Msa1151630:three_prime_UTR
AGTTTCAGTGAATCCTTATA+TGG 0.332386 7_4:-36214649 Msa1151630:three_prime_UTR
GACAGAACGCCGATAGCATT+TGG 0.335410 7_4:+36219000 None:intergenic
TATATCAAAACTGAGGTCTT+TGG 0.336096 7_4:-36218278 Msa1151630:three_prime_UTR
TAAGAGGAGAGTTTCCAAAT+TGG 0.338162 7_4:-36215711 Msa1151630:three_prime_UTR
AAAGTAAGACTCCTAATAGA+TGG 0.339753 7_4:+36217197 None:intergenic
AACCATGCCTGCCGCCAATA+AGG 0.348466 7_4:+36214031 None:intergenic
AAGCCACTTAAGCTCCTTAG+AGG 0.350702 7_4:-36215361 Msa1151630:three_prime_UTR
TTCATGAGTTCTTGTACAAT+TGG 0.355572 7_4:+36219145 None:intergenic
TTTGAGTTTGGTGACTCTTC+CGG 0.355694 7_4:+36219268 None:intergenic
GAGAGATATATCACAGATTT+GGG 0.359153 7_4:-36214624 Msa1151630:three_prime_UTR
TTTCCCGATAAGAAAATTGT+TGG 0.365042 7_4:+36214444 None:intergenic
TTAAATTGTTGTTACTCAAA+TGG 0.372198 7_4:+36214968 None:intergenic
TCTAGATGTAGCAACTTTGA+TGG 0.374008 7_4:+36218747 None:intergenic
AAAATTGTGTGAACGAAATA+GGG 0.375805 7_4:+36215938 None:intergenic
CATTACCATAGATGAACTTA+AGG 0.376066 7_4:+36215902 None:intergenic
AGAAATATGAAGAGCTTAGT+AGG 0.379201 7_4:-36219513 Msa1151630:three_prime_UTR
AGAAATATGAAGAGCTTAGT+AGG 0.379201 7_4:-36221698 None:intergenic
GATATGTGTAATATATAATA+TGG 0.382735 7_4:-36213900 Msa1151630:three_prime_UTR
CATTTGACATATTTGTTGTT+GGG 0.385515 7_4:-36215264 Msa1151630:three_prime_UTR
ATATTTATAGCTTCTCAAAC+TGG 0.386541 7_4:+36219398 None:intergenic
ATATTTATAGCTTCTCAAAC+TGG 0.386541 7_4:+36221583 None:intergenic
TGAAAGGAAACGAGTTTAAA+GGG 0.391825 7_4:-36217175 Msa1151630:three_prime_UTR
AGTGTTATTGAAGTTGTTGT+TGG 0.392949 7_4:+36218491 None:intergenic
CTTAAGTTCATCTATGGTAA+TGG 0.394457 7_4:-36215901 Msa1151630:three_prime_UTR
GGGGAAATACCTAGATGTTT+GGG 0.397501 7_4:-36214709 Msa1151630:three_prime_UTR
ATGGCACACAACAATTTATC+AGG 0.398193 7_4:-36214304 Msa1151630:three_prime_UTR
TCATTTGACATATTTGTTGT+TGG 0.400056 7_4:-36215265 Msa1151630:three_prime_UTR
GCTTAAGCAGTTGGAAGAGT+TGG 0.402849 7_4:-36216130 Msa1151630:three_prime_UTR
AAGGCATTTGGCAATGTAGA+AGG 0.403159 7_4:+36214166 None:intergenic
GGTAGCATCCCATCTGAGTT+AGG 0.403957 7_4:-36214499 Msa1151630:three_prime_UTR
AGCAATTCGGTTTCATTTCA+CGG 0.404003 7_4:-36218928 Msa1151630:intron
TTTAAGTAAAACAGGTTACT+TGG 0.404694 7_4:+36215216 None:intergenic
ATCATCTCCTTCCTCGTTCA+AGG 0.404768 7_4:+36214147 None:intergenic
TACTTGGGATGCTACCAAAA+AGG 0.405410 7_4:+36215232 None:intergenic
CTTTCACAAAACAATTTGTC+AGG 0.405897 7_4:-36215030 Msa1151630:three_prime_UTR
TTAAGTTCATCTATGGTAAT+GGG 0.406927 7_4:-36215900 Msa1151630:three_prime_UTR
GTATCTGACAATGCAATAAC+AGG 0.409481 7_4:-36215480 Msa1151630:three_prime_UTR
TGGAAGGACTTTCTTCTCTC+AGG 0.409592 7_4:-36218972 Msa1151630:three_prime_UTR
AAACAGGTCCAAAACCTCTA+AGG 0.415757 7_4:+36215347 None:intergenic
CTCTCCTCTTAGTTTACAAC+CGG 0.416742 7_4:+36215723 None:intergenic
TTAAAAGAATTACCTCCAAT+TGG 0.417565 7_4:+36216299 None:intergenic
ATTCATTCCTTTGATCAGTA+AGG 0.420028 7_4:+36219659 None:intergenic
AATATTCTTATGTACATGTC+TGG 0.420497 7_4:-36214550 Msa1151630:three_prime_UTR
CGCACTTATTGCTATGTCAA+TGG 0.422256 7_4:-36219351 Msa1151630:three_prime_UTR
ATTAGCTGCTATCAGCAATT+CGG 0.422901 7_4:-36218941 Msa1151630:three_prime_UTR
GTCGATTTAGTTGTTCCTAA+AGG 0.423319 7_4:-36217583 Msa1151630:intron
TTAAGTTCTGCAACCTCTGA+TGG 0.424565 7_4:+36215072 None:intergenic
TGAAGTAATTACCTTTCATA+AGG 0.425157 7_4:+36214806 None:intergenic
CATGGGATTCAAATCTTTGA+AGG 0.430754 7_4:-36218673 Msa1151630:three_prime_UTR
AAGATCAATGGAGATTAATT+GGG 0.433659 7_4:+36219553 None:intergenic
AAGCTATAAATATTATACTT+TGG 0.434161 7_4:-36219388 Msa1151630:three_prime_UTR
GAGGGTAATCAATTTCTTTG+TGG 0.434740 7_4:-36214229 Msa1151630:three_prime_UTR
CAATCTACATGAGTGGTTAT+GGG 0.436417 7_4:-36217225 Msa1151630:three_prime_UTR
CCAATGCAATTTGACTTATG+TGG 0.447968 7_4:-36215752 Msa1151630:three_prime_UTR
ATGAAAGGTAATTACTTCAC+AGG 0.449740 7_4:-36214802 Msa1151630:three_prime_UTR
TGATGCTTATCTGAAATTTG+AGG 0.451377 7_4:+36219631 None:intergenic
CTCCCTTGAAGTATTCAGTA+TGG 0.451383 7_4:-36214323 Msa1151630:three_prime_UTR
ATATTGATGAAGTTTGAGTT+TGG 0.452458 7_4:+36219256 None:intergenic
GAAGTAAAACTTGCAAGGTT+AGG 0.453004 7_4:+36216000 None:intergenic
AGGAAGGAGATGATGATAGT+TGG 0.453032 7_4:-36214138 Msa1151630:three_prime_UTR
GGAAGGAGATGATGATAGTT+GGG 0.456861 7_4:-36214137 Msa1151630:three_prime_UTR
TTAAGTCGCACCAACTTGAA+TGG 0.456974 7_4:-36218034 Msa1151630:three_prime_UTR
ATTAGGAGTCTTACTTTGAA+AGG 0.457044 7_4:-36217191 Msa1151630:three_prime_UTR
CTGTTTGGTAATGAATTGTC+TGG 0.458797 7_4:-36215330 Msa1151630:three_prime_UTR
TGGATATTCCAGACGCTGAT+AGG 0.460777 7_4:+36219165 None:intergenic
CAGACAATTCATTACCAAAC+AGG 0.461217 7_4:+36215331 None:intergenic
ACAGAACGCCGATAGCATTT+GGG 0.462573 7_4:+36219001 None:intergenic
TTTAAAGGGACAATCCTTGA+TGG 0.464962 7_4:-36217161 Msa1151630:three_prime_UTR
CAATAAAATTATTGTAAGAA+AGG 0.465581 7_4:+36214731 None:intergenic
GCATTTGAATGACATTGGAT+TGG 0.466809 7_4:-36218646 Msa1151630:three_prime_UTR
TGCAATTATTACCTCCATCA+AGG 0.468497 7_4:+36217147 None:intergenic
AGCAACAATGAAATATCAAA+TGG 0.468803 7_4:-36214877 Msa1151630:three_prime_UTR
TTCATCAATATGCCTTTACT+GGG 0.470294 7_4:-36219244 Msa1151630:three_prime_UTR
GTCAAGTTTCCTAACTCAGA+TGG 0.476350 7_4:+36214490 None:intergenic
CACACTCAACTTTGAAAACA+CGG 0.477238 7_4:-36215858 Msa1151630:three_prime_UTR
TTGAAATTTCTCCTTATGAA+AGG 0.479702 7_4:-36214817 Msa1151630:three_prime_UTR
CCAAATAACTTACCTGGAGA+TGG 0.480291 7_4:-36215300 Msa1151630:three_prime_UTR
ATAAGTGATACCCTTCCAAT+TGG 0.480828 7_4:-36216314 Msa1151630:three_prime_UTR
ACTGATATTGCATCTGCTCT+TGG 0.482950 7_4:-36218471 Msa1151630:three_prime_UTR
ACCAAATTGGAGAATGTAGC+TGG 0.483892 7_4:+36214418 None:intergenic
GAACTGCATTTGAATGACAT+TGG 0.487894 7_4:-36218651 Msa1151630:three_prime_UTR
ATCCTTATTGGCGGCAGGCA+TGG 0.490006 7_4:-36214033 Msa1151630:three_prime_UTR
TGATGTGTTGTGAAGGGTGT+TGG 0.490527 7_4:-36219455 Msa1151630:three_prime_UTR
TGATGTGTTGTGAAGGGTGT+TGG 0.490527 7_4:-36221640 Msa1151630:CDS
GCAGAAGTGTTTACAAATGA+AGG 0.491894 7_4:+36215000 None:intergenic
GTGCCATACTGAATACTTCA+AGG 0.492652 7_4:+36214320 None:intergenic
GGCGTTCTGTCTTGTGTGGA+AGG 0.492994 7_4:-36218988 Msa1151630:three_prime_UTR
TTGTTAACATGACATCACTT+AGG 0.494316 7_4:-36216065 Msa1151630:three_prime_UTR
TTGGTCTAAGCTTAAGCAGT+TGG 0.496536 7_4:-36216139 Msa1151630:three_prime_UTR
GTAGAAGGTTCTTCTCCACT+TGG 0.497051 7_4:+36214181 None:intergenic
TAATTTGGAATACTTAGCAT+TGG 0.498057 7_4:-36216423 Msa1151630:three_prime_UTR
ATAAGTAATAATAATTTCAC+TGG 0.498228 7_4:-36215174 Msa1151630:three_prime_UTR
TCTAGAGTCAGTAGGGGAGA+AGG 0.499076 7_4:+36214904 None:intergenic
TGAATAAGAAAATTTGGAAG+TGG 0.499666 7_4:+36215775 None:intergenic
GATATTGCATCTGCTCTTGG+TGG 0.501903 7_4:-36218468 Msa1151630:three_prime_UTR
AAGAATTACCTCCAATTGGA+AGG 0.502800 7_4:+36216303 None:intergenic
CAAGTTCTTTCGTACCTAAG+TGG 0.505350 7_4:-36218082 Msa1151630:three_prime_UTR
AATCTCGACCTATCAGCGTC+TGG 0.506293 7_4:-36219173 Msa1151630:three_prime_UTR
ATGTCTAGAAATGCAATTCA+CGG 0.506516 7_4:-36215402 Msa1151630:three_prime_UTR
TCAAAGTTGAGTGTGAATCA+AGG 0.508201 7_4:+36215866 None:intergenic
AATGACATTGGATTGGACTC+AGG 0.509881 7_4:-36218639 Msa1151630:three_prime_UTR
GCACTTATTGCTATGTCAAT+GGG 0.510828 7_4:-36219350 Msa1151630:three_prime_UTR
AATGGATCGCTAGATATTAG+TGG 0.511574 7_4:-36218016 Msa1151630:intron
GAAATTTCAAGCTGGTATAA+CGG 0.511816 7_4:+36214830 None:intergenic
GGCATTCTACCCAAACATCT+AGG 0.511876 7_4:+36214700 None:intergenic
TTGACTTATGTGGATTTCAC+CGG 0.514837 7_4:-36215742 Msa1151630:three_prime_UTR
GTTGTTACTCAAATGGATAC+TGG 0.516091 7_4:+36214975 None:intergenic
TATCAGGTGCAACACCTGAA+TGG 0.517489 7_4:-36214288 Msa1151630:three_prime_UTR
TTTGGTGACTCTTCCGGTGG+TGG 0.518965 7_4:+36219274 None:intergenic
CATCAATCCTTATTGGCGGC+AGG 0.519529 7_4:-36214038 Msa1151630:three_prime_UTR
TTAAGTAAAACAGGTTACTT+GGG 0.520047 7_4:+36215217 None:intergenic
AAACCTCTAAGGAGCTTAAG+TGG 0.520413 7_4:+36215358 None:intergenic
GTAAGGTGGCATAATTGCTT+CGG 0.521811 7_4:+36214772 None:intergenic
ATTGTTGCCAATTTGAGAAG+AGG 0.521863 7_4:+36215507 None:intergenic
GCTAATGTCTAGAGTCAGTA+GGG 0.524343 7_4:+36214897 None:intergenic
TCTGGATCCAGATTCTCAAA+AGG 0.529803 7_4:+36214679 None:intergenic
TCAAGTTTCCTAACTCAGAT+GGG 0.531222 7_4:+36214491 None:intergenic
GGATTGATGTACAGAACAGT+TGG 0.531369 7_4:+36214052 None:intergenic
CCACATAAGTCAAATTGCAT+TGG 0.533282 7_4:+36215752 None:intergenic
TTTCCGTGTTAGCTTTATTG+TGG 0.533414 7_4:-36214101 Msa1151630:three_prime_UTR
CAAATTCCTCATCAACTAAG+TGG 0.534722 7_4:-36214352 Msa1151630:three_prime_UTR
ATTTGGAAGTGGAATAGACT+TGG 0.536333 7_4:+36215786 None:intergenic
TTTCCCCATAAAATCGTTGT+GGG 0.537564 7_4:+36216101 None:intergenic
ATTTGATGAAAGCAGCTATG+AGG 0.540118 7_4:-36214248 Msa1151630:three_prime_UTR
TGAAATCCTACCATCAGTCA+TGG 0.540328 7_4:-36218691 Msa1151630:three_prime_UTR
AATTGTTCTCAGACAAGTCA+AGG 0.540784 7_4:+36218251 None:intergenic
TTCACCGGTTGTAAACTAAG+AGG 0.541421 7_4:-36215727 Msa1151630:three_prime_UTR
CAGAGAATCATAGATTTGTA+CGG 0.541475 7_4:-36218117 Msa1151630:three_prime_UTR
AAATGTATTACATGTGAGGC+TGG 0.542174 7_4:-36213932 Msa1151630:three_prime_UTR
CATAAGGAGAAATTTCAAGC+TGG 0.542547 7_4:+36214822 None:intergenic
CATCTAGAGGTCCTTGACAT+AGG 0.543115 7_4:-36218732 Msa1151630:three_prime_UTR
CTTAATGTGATGTGTTGTGA+AGG 0.543901 7_4:-36219462 Msa1151630:three_prime_UTR
CTTAATGTGATGTGTTGTGA+AGG 0.543901 7_4:-36221647 Msa1151630:CDS
TTTGATGAAAGCAGCTATGA+GGG 0.545511 7_4:-36214247 Msa1151630:three_prime_UTR
CCAAATGCCTTGAACGAGGA+AGG 0.546583 7_4:-36214154 Msa1151630:three_prime_UTR
GAAATACCAAATAACTTACC+TGG 0.547241 7_4:-36215306 Msa1151630:three_prime_UTR
TGTACATCAATCCTTATTGG+CGG 0.547970 7_4:-36214042 Msa1151630:three_prime_UTR
AGTGATACCCTTCCAATTGG+AGG 0.549670 7_4:-36216311 Msa1151630:intron
AATTTGAACTTATTGCCTCT+AGG 0.551150 7_4:-36218232 Msa1151630:intron
TAACACTGATTGTTGTGAAT+GGG 0.551738 7_4:-36219315 Msa1151630:three_prime_UTR
ATTCTATCCTTACTGATCAA+AGG 0.553245 7_4:-36219666 Msa1151630:CDS
AAGTAAGACTCCTAATAGAT+GGG 0.554029 7_4:+36217198 None:intergenic
TTCAAAATGATTATTGGACA+TGG 0.554295 7_4:+36215104 None:intergenic
GGCATACACATCAATAGTGT+TGG 0.556702 7_4:-36214080 Msa1151630:three_prime_UTR
GTCATGTTAACAAAAGATGA+GGG 0.557024 7_4:+36216075 None:intergenic
TATCCAAAAGCACATTCAGT+GGG 0.558909 7_4:-36214939 Msa1151630:three_prime_UTR
CTTAAGTGGCTTAGCTCATG+AGG 0.559213 7_4:+36215372 None:intergenic
GTAACACTGATTGTTGTGAA+TGG 0.559967 7_4:-36219316 Msa1151630:three_prime_UTR
ATTCCAAATTACTTAAACCA+CGG 0.561230 7_4:+36216435 None:intergenic
ATGAGTTGACTCCCATCTCC+AGG 0.562169 7_4:+36215288 None:intergenic
TGAAGGGTCAATTCCATCAG+AGG 0.564633 7_4:-36215085 Msa1151630:three_prime_UTR
GAAAGAACTTGTAAGCTGAA+TGG 0.565296 7_4:+36218094 None:intergenic
ATCAAAGTTGCTACATCTAG+AGG 0.566240 7_4:-36218745 Msa1151630:three_prime_UTR
CAAGTGAAGTAAAACTTGCA+AGG 0.567733 7_4:+36215995 None:intergenic
AAGTCAAGAGATGTGAGAAG+TGG 0.567988 7_4:+36218055 None:intergenic
ATCTAGCGATCCATTCAAGT+TGG 0.568162 7_4:+36218024 None:intergenic
TTCAGTGAATCCTTATATGG+TGG 0.568239 7_4:-36214646 Msa1151630:three_prime_UTR
CAAATAACTTACCTGGAGAT+GGG 0.569316 7_4:-36215299 Msa1151630:three_prime_UTR
ATAGCGCTGATTGTTGTGAA+TGG 0.570023 7_4:-36221544 Msa1151630:CDS
TTGACATATTTGTTGTTGGG+TGG 0.570406 7_4:-36215261 Msa1151630:three_prime_UTR
CTTTCTTTCAACATGTTGAG+TGG 0.573854 7_4:-36214376 Msa1151630:three_prime_UTR
AATTGTTGTTACCTATGTCA+AGG 0.574832 7_4:+36218721 None:intergenic
TAGCGCTGATTGTTGTGAAT+GGG 0.581926 7_4:-36221543 Msa1151630:CDS
GAATTGCTACTACTTCATTG+AGG 0.582073 7_4:-36213984 Msa1151630:three_prime_UTR
CTAGTATATCTAAATCAGTA+AGG 0.582624 7_4:+36214755 None:intergenic
GATTTGAATCCCATGACTGA+TGG 0.583414 7_4:+36218681 None:intergenic
TGAATCCCATGACTGATGGT+AGG 0.586465 7_4:+36218685 None:intergenic
AGAATTACCTCCAATTGGAA+GGG 0.587383 7_4:+36216304 None:intergenic
TGTCATGTTAACAAAAGATG+AGG 0.589971 7_4:+36216074 None:intergenic
GTCAACCCACTTAGTTGATG+AGG 0.590185 7_4:+36214346 None:intergenic
ATTCAGTTCCCAAATGCTAT+CGG 0.591126 7_4:-36219009 Msa1151630:three_prime_UTR
ACACTCAACTTTGAAAACAC+GGG 0.591526 7_4:-36215857 Msa1151630:three_prime_UTR
GGTTCAGCAAAAGCAACGGA+TGG 0.595175 7_4:-36219754 Msa1151630:intron
GTTTCCCCATAAAATCGTTG+TGG 0.595742 7_4:+36216100 None:intergenic
AATGACTTGACTTGAAGACT+TGG 0.602181 7_4:+36219686 None:intergenic
TTTGAATGTAACACCACCAC+CGG 0.606495 7_4:-36219287 Msa1151630:three_prime_UTR
GAAATCCTACCATCAGTCAT+GGG 0.607956 7_4:-36218690 Msa1151630:three_prime_UTR
AGTTGTTGTTGGAGATGTCA+AGG 0.608673 7_4:+36218502 None:intergenic
AATTGTACAAGAACTCATGA+AGG 0.609681 7_4:-36219143 Msa1151630:intron
TGAAAGGTAATTACTTCACA+GGG 0.615837 7_4:-36214801 Msa1151630:three_prime_UTR
TGCTAATGTCTAGAGTCAGT+AGG 0.616979 7_4:+36214896 None:intergenic
TTATTGCTATGTCAATGGGA+AGG 0.618720 7_4:-36219346 Msa1151630:three_prime_UTR
CATCAATATGCCTTTACTGG+GGG 0.618867 7_4:-36219242 Msa1151630:three_prime_UTR
TTATCCAAAAGCACATTCAG+TGG 0.621900 7_4:-36214940 Msa1151630:three_prime_UTR
TGCCATACTGAATACTTCAA+GGG 0.622420 7_4:+36214321 None:intergenic
AAATTCCTCATCAACTAAGT+GGG 0.622435 7_4:-36214351 Msa1151630:three_prime_UTR
AGGAGATGATGATAGTTGGG+TGG 0.625815 7_4:-36214134 Msa1151630:three_prime_UTR
AAAGGGACAATCCTTGATGG+AGG 0.627581 7_4:-36217158 Msa1151630:intron
TTGGAAATGTATTACATGTG+AGG 0.628389 7_4:-36213936 Msa1151630:three_prime_UTR
TGAGAAGTGGAAGACCACTT+AGG 0.628902 7_4:+36218068 None:intergenic
ATTTGGTTCAGCAAAAGCAA+CGG 0.636565 7_4:-36219758 Msa1151630:intron
TTAATGTGATGTGTTGTGAA+GGG 0.637542 7_4:-36219461 Msa1151630:three_prime_UTR
TTAATGTGATGTGTTGTGAA+GGG 0.637542 7_4:-36221646 Msa1151630:CDS
ATGGAAGCAATCTACATGAG+TGG 0.643451 7_4:-36217232 Msa1151630:three_prime_UTR
TATCGGCGTTCTGTCTTGTG+TGG 0.648748 7_4:-36218992 Msa1151630:three_prime_UTR
GGTGCAACACCTGAATGGAA+AGG 0.655352 7_4:-36214283 Msa1151630:three_prime_UTR
GTATATCTAAATCAGTAAGG+TGG 0.657969 7_4:+36214758 None:intergenic
TCATCAATATGCCTTTACTG+GGG 0.659591 7_4:-36219243 Msa1151630:three_prime_UTR
ATGCCACAATAAAGCTAACA+CGG 0.661352 7_4:+36214098 None:intergenic
GAGTTTGGTGACTCTTCCGG+TGG 0.671087 7_4:+36219271 None:intergenic
TCATGTTAACAAAAGATGAG+GGG 0.676899 7_4:+36216076 None:intergenic
ACTGATTGTTGTGAATGGGA+AGG 0.686379 7_4:-36219311 Msa1151630:three_prime_UTR
TGCTAGATATATCAAAACTG+AGG 0.686622 7_4:-36218285 Msa1151630:intron
ATTGCCAAATGCCTTGAACG+AGG 0.690157 7_4:-36214158 Msa1151630:three_prime_UTR
ATTTCAAGCTGGTATAACGG+AGG 0.702643 7_4:+36214833 None:intergenic
ATCCAAAAGCACATTCAGTG+GGG 0.703696 7_4:-36214938 Msa1151630:three_prime_UTR
CTAATGTCTAGAGTCAGTAG+GGG 0.704903 7_4:+36214898 None:intergenic
CATACTGAATACTTCAAGGG+AGG 0.706637 7_4:+36214324 None:intergenic
GCTGATTGTTGTGAATGGGA+CGG 0.716754 7_4:-36221539 Msa1151630:CDS
GTTACTCAAATGGATACTGG+TGG 0.757243 7_4:+36214978 None:intergenic
ACGGATGGAAGTCTTCAACA+CGG 0.783961 7_4:-36219739 Msa1151630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATAATAAATCTTATTC+TGG - chr7_4:36214501-36214520 Msa1151630:three_prime_UTR 10.0%
!!! TTAAATATTTAACTTTTCAA+AGG + chr7_4:36215501-36215520 None:intergenic 10.0%
!! TAATATGTAAATGAAAATTA+TGG + chr7_4:36216463-36216482 None:intergenic 10.0%
!!! TAAAATATCCTTTTTTTTTA+TGG + chr7_4:36217788-36217807 None:intergenic 10.0%
!!! TTTCTTACAATAATTTTATT+GGG - chr7_4:36220806-36220825 Msa1151630:intron 10.0%
!! AACATTCTTAATGAAAATTA+TGG + chr7_4:36214228-36214247 None:intergenic 15.0%
!!! GATAAACTAATTAAAGTTTT+TGG + chr7_4:36214298-36214317 None:intergenic 15.0%
!! ATTTATCTTAACCATTATTT+AGG + chr7_4:36214452-36214471 None:intergenic 15.0%
!! AAGCTATAAATATTATACTT+TGG - chr7_4:36213962-36213981 Msa1151630:three_prime_UTR 15.0%
!!! GTATAAAATTAAACTTTTGA+GGG + chr7_4:36217101-36217120 None:intergenic 15.0%
!! TTAGATTTCAATATGATAAA+TGG - chr7_4:36218284-36218303 Msa1151630:intron 15.0%
!!! ATTTTGCTTATATTTTGAAA+CGG + chr7_4:36218537-36218556 None:intergenic 15.0%
!!! ATAAGCAAAATTCATTTTTT+AGG + chr7_4:36218528-36218547 None:intergenic 15.0%
!!! ATTTTGCTTATATTTTGAAA+CGG - chr7_4:36218537-36218556 Msa1151630:intron 15.0%
!! CTATTACATTATCAATAATT+TGG + chr7_4:36218960-36218979 None:intergenic 15.0%
!! AAAAGGAAATTAAAAATCTT+AGG + chr7_4:36219304-36219323 None:intergenic 15.0%
!!! AATCAATTTATTGGTAATAT+AGG - chr7_4:36219511-36219530 Msa1151630:three_prime_UTR 15.0%
!! ATAAGTAATAATAATTTCAC+TGG - chr7_4:36220361-36220380 Msa1151630:intron 15.0%
!!! GATTGAACTATTTTTTATTT+GGG + chr7_4:36220398-36220417 None:intergenic 15.0%
!!! AGATTGAACTATTTTTTATT+TGG + chr7_4:36220399-36220418 None:intergenic 15.0%
!! CAATAAAATTATTGTAAGAA+AGG + chr7_4:36220807-36220826 None:intergenic 15.0%
!!! CTTTCTTACAATAATTTTAT+TGG - chr7_4:36220805-36220824 Msa1151630:intron 15.0%
!!! TTCTTACAATAATTTTATTG+GGG - chr7_4:36220807-36220826 Msa1151630:intron 15.0%
!! TTATCACATAATAAGTTAAA+TGG - chr7_4:36221015-36221034 Msa1151630:intron 15.0%
!!! TGTGTAAGTTTTTTTAATTT+TGG - chr7_4:36221580-36221599 Msa1151630:CDS 15.0%
!! GATATGTGTAATATATAATA+TGG - chr7_4:36221635-36221654 Msa1151630:CDS 15.0%
!! AACAAAAAGTAACAAAAACA+CGG + chr7_4:36213865-36213884 None:intergenic 20.0%
!!! AAAGTTTTTGGTAAAATTAG+TGG + chr7_4:36214286-36214305 None:intergenic 20.0%
!! TAACCATTATTTAGGAATAT+TGG + chr7_4:36214444-36214463 None:intergenic 20.0%
!! TCTAAAAGAATTCAAAAATC+AGG + chr7_4:36214594-36214613 None:intergenic 20.0%
!!! AATTTATATTTTGTTGTCGA+AGG + chr7_4:36214673-36214692 None:intergenic 20.0%
!! ATTCCAAAATGCATAAAAAT+AGG - chr7_4:36214700-36214719 Msa1151630:three_prime_UTR 20.0%
!! TAATGAGAGTTATAAGAATT+TGG - chr7_4:36215017-36215036 Msa1151630:three_prime_UTR 20.0%
!! AACAAAAAGTAACAAAAACA+CGG + chr7_4:36213865-36213884 None:intergenic 20.0%
!! TTAAGAAAGAAAACTAAAAC+TGG + chr7_4:36216643-36216662 None:intergenic 20.0%
!! AATATATTAATTGAACGTGT+AGG - chr7_4:36216992-36217011 Msa1151630:intron 20.0%
!!! CGTATAAAATTAAACTTTTG+AGG + chr7_4:36217102-36217121 None:intergenic 20.0%
!!! GTTTTTGTTTGAAAATCATA+TGG - chr7_4:36217199-36217218 Msa1151630:three_prime_UTR 20.0%
!! TAATTTATAGCTACTTAGAT+TGG - chr7_4:36217548-36217567 Msa1151630:intron 20.0%
!!! TTTTTTACTCTATTCTGTAA+AGG - chr7_4:36217681-36217700 Msa1151630:intron 20.0%
!!! TTTTTACTCTATTCTGTAAA+GGG - chr7_4:36217682-36217701 Msa1151630:intron 20.0%
!! TTTAAATTGAATTACAACTC+TGG - chr7_4:36218000-36218019 Msa1151630:intron 20.0%
!! GTCATGAATTAAAACATATT+TGG + chr7_4:36218111-36218130 None:intergenic 20.0%
!!! AATTTTATCCGATAAACAAT+TGG - chr7_4:36218212-36218231 Msa1151630:intron 20.0%
!! CATTCATTTAATGATTTATG+TGG - chr7_4:36218464-36218483 Msa1151630:three_prime_UTR 20.0%
!! CATTTATTTAATGATGTATG+TGG + chr7_4:36218503-36218522 None:intergenic 20.0%
!! TCAAATAATTACTCTATTTC+TGG - chr7_4:36219022-36219041 Msa1151630:three_prime_UTR 20.0%
!!! AATGAGTTTTTCAAAAGTAT+TGG - chr7_4:36219155-36219174 Msa1151630:three_prime_UTR 20.0%
!!! TTTGAACAACTTTTACATTA+CGG - chr7_4:36219271-36219290 Msa1151630:three_prime_UTR 20.0%
!! TAGATTTCAACAAATAGAAA+AGG + chr7_4:36219321-36219340 None:intergenic 20.0%
!!! CAAACTTTTATTTTTCAGAT+TGG - chr7_4:36219377-36219396 Msa1151630:three_prime_UTR 20.0%
!! CTCACTAATAATCAATTTAT+TGG - chr7_4:36219502-36219521 Msa1151630:three_prime_UTR 20.0%
!!! CTTGAATATCTTAATTTTGA+AGG - chr7_4:36219559-36219578 Msa1151630:three_prime_UTR 20.0%
!!! TTGTTTTCTAATAACCAATT+TGG + chr7_4:36219841-36219860 None:intergenic 20.0%
!! ATTAGAAAACAACACAAAAA+TGG - chr7_4:36219849-36219868 Msa1151630:intron 20.0%
!!! TGATGTTTTTTAAGTAAAAC+AGG + chr7_4:36220330-36220349 None:intergenic 20.0%
!! CTTAAAAAACATCAATTGTT+TGG - chr7_4:36220336-36220355 Msa1151630:intron 20.0%
!!! TTAAATTGTTGTTACTCAAA+TGG + chr7_4:36220570-36220589 None:intergenic 20.0%
!!! ATTATTTTCAATGCAGTATT+TGG + chr7_4:36221672-36221691 None:intergenic 20.0%
! ATATTTATAGCTTCTCAAAC+TGG + chr7_4:36213955-36213974 None:intergenic 25.0%
! ATAGTTAAGTGATCTAGTAT+TGG + chr7_4:36214075-36214094 None:intergenic 25.0%
! TACTAGATCACTTAACTATT+CGG - chr7_4:36214076-36214095 Msa1151630:three_prime_UTR 25.0%
! CAACCAATATTCCTAAATAA+TGG - chr7_4:36214438-36214457 Msa1151630:three_prime_UTR 25.0%
!! TATTATTAAAGCATCCTTGA+AGG + chr7_4:36214491-36214510 None:intergenic 25.0%
! GTATGAAACAACAATACAAT+TGG + chr7_4:36215194-36215213 None:intergenic 25.0%
!! AAGTCGTACAAAATTCATTT+TGG - chr7_4:36215235-36215254 Msa1151630:three_prime_UTR 25.0%
! TTAGATAGACAAAATGATGA+TGG + chr7_4:36215299-36215318 None:intergenic 25.0%
!! CTTCTTTTCTATTAAGCTTT+TGG - chr7_4:36215591-36215610 Msa1151630:intron 25.0%
!!! CTATTAAGCTTTTGGAAATT+AGG - chr7_4:36215599-36215618 Msa1151630:intron 25.0%
! AATTACCTAAGAAGTAAGTT+GGG + chr7_4:36215760-36215779 None:intergenic 25.0%
! AAATTACCTAAGAAGTAAGT+TGG + chr7_4:36215761-36215780 None:intergenic 25.0%
! AACTTACTTCTTAGGTAATT+TGG - chr7_4:36215760-36215779 Msa1151630:three_prime_UTR 25.0%
! AAGATCAATGGAGATTAATT+GGG + chr7_4:36215985-36216004 None:intergenic 25.0%
! TAAGATCAATGGAGATTAAT+TGG + chr7_4:36215986-36216005 None:intergenic 25.0%
! ATATTTATAGCTTCTCAAAC+TGG + chr7_4:36213955-36213974 None:intergenic 25.0%
!! ATATTGATGAAGTTTGAGTT+TGG + chr7_4:36216282-36216301 None:intergenic 25.0%
! TCATTTACATATTATTGTGC+AGG - chr7_4:36216469-36216488 Msa1151630:intron 25.0%
! CATTTACATATTATTGTGCA+GGG - chr7_4:36216470-36216489 Msa1151630:intron 25.0%
!! AACACTTTCCATTTTATAAC+CGG - chr7_4:36216956-36216975 Msa1151630:intron 25.0%
! ATAAAGATGTACATGATTAG+TGG + chr7_4:36217226-36217245 None:intergenic 25.0%
!!! ATATCCTTTTTTTTTATGGC+CGG + chr7_4:36217784-36217803 None:intergenic 25.0%
! AACGTAATCCAATTGTTTAT+CGG + chr7_4:36218223-36218242 None:intergenic 25.0%
! GTCAAAAAATTTAAGCAGAT+TGG - chr7_4:36218250-36218269 Msa1151630:three_prime_UTR 25.0%
! ATGTATGTGGTTCATAATAT+GGG + chr7_4:36218490-36218509 None:intergenic 25.0%
! TTAAAGACAGATTACATTGT+CGG + chr7_4:36218599-36218618 None:intergenic 25.0%
!!! GATGACTGTGTAATTTTAAT+TGG + chr7_4:36218630-36218649 None:intergenic 25.0%
! ATTCCAAATTACTTAAACCA+CGG + chr7_4:36219103-36219122 None:intergenic 25.0%
!! TAATTTGGAATACTTAGCAT+TGG - chr7_4:36219112-36219131 Msa1151630:intron 25.0%
!!! ACAGACAAAACTTTTAAAGA+AGG + chr7_4:36219188-36219207 None:intergenic 25.0%
! TTAAAAGAATTACCTCCAAT+TGG + chr7_4:36219239-36219258 None:intergenic 25.0%
!! TGAGAAAATTGTCACTTAAA+AGG + chr7_4:36219359-36219378 None:intergenic 25.0%
! AAAATTGTGTGAACGAAATA+GGG + chr7_4:36219600-36219619 None:intergenic 25.0%
! TTAAGTTCATCTATGGTAAT+GGG - chr7_4:36219635-36219654 Msa1151630:CDS 25.0%
! TGAATAAGAAAATTTGGAAG+TGG + chr7_4:36219763-36219782 None:intergenic 25.0%
! CATTGGTGAATAAGAAAATT+TGG + chr7_4:36219769-36219788 None:intergenic 25.0%
!! CAGTTCAATTTTTCCTAATT+TGG - chr7_4:36220099-36220118 Msa1151630:intron 25.0%
! ATGTTTAGATGAACCAAATT+AGG + chr7_4:36220115-36220134 None:intergenic 25.0%
!!! TCATTTGACATATTTGTTGT+TGG - chr7_4:36220270-36220289 Msa1151630:intron 25.0%
!!! CATTTGACATATTTGTTGTT+GGG - chr7_4:36220271-36220290 Msa1151630:intron 25.0%
! TTAAGTAAAACAGGTTACTT+GGG + chr7_4:36220321-36220340 None:intergenic 25.0%
! TTTAAGTAAAACAGGTTACT+TGG + chr7_4:36220322-36220341 None:intergenic 25.0%
!!! GAACTATTTTTTATTTGGGT+TGG + chr7_4:36220394-36220413 None:intergenic 25.0%
! TTCAAAATGATTATTGGACA+TGG + chr7_4:36220434-36220453 None:intergenic 25.0%
!! ATGTCCAATAATCATTTTGA+AGG - chr7_4:36220433-36220452 Msa1151630:intron 25.0%
!! TGTCCAATAATCATTTTGAA+GGG - chr7_4:36220434-36220453 Msa1151630:intron 25.0%
! AGCAACAATGAAATATCAAA+TGG - chr7_4:36220658-36220677 Msa1151630:intron 25.0%
! TTGAAATTTCTCCTTATGAA+AGG - chr7_4:36220718-36220737 Msa1151630:intron 25.0%
! TGAAGTAATTACCTTTCATA+AGG + chr7_4:36220732-36220751 None:intergenic 25.0%
! CTAGTATATCTAAATCAGTA+AGG + chr7_4:36220783-36220802 None:intergenic 25.0%
! AATATTCTTATGTACATGTC+TGG - chr7_4:36220985-36221004 Msa1151630:intron 25.0%
!! TTGTCCAACAATTTTCTTAT+CGG - chr7_4:36221087-36221106 Msa1151630:intron 25.0%
TTAATGTGATGTGTTGTGAA+GGG - chr7_4:36213889-36213908 Msa1151630:three_prime_UTR 30.0%
TTGATGAGTTCTTGTACAAT+TGG + chr7_4:36214156-36214175 None:intergenic 30.0%
AATTGTACAAGAACTCATCA+AGG - chr7_4:36214155-36214174 Msa1151630:three_prime_UTR 30.0%
!! GCTTATAGTTGATAGCTTAT+AGG + chr7_4:36214336-36214355 None:intergenic 30.0%
GATAGTTTATTGCTGATGAA+TGG + chr7_4:36214361-36214380 None:intergenic 30.0%
!! GCTCTTTTTGGTAAAAATAG+CGG + chr7_4:36214390-36214409 None:intergenic 30.0%
TCTTGAATAACCAACAACTT+AGG + chr7_4:36214412-36214431 None:intergenic 30.0%
ATTATTTGAGCAAACCTTCA+AGG - chr7_4:36214474-36214493 Msa1151630:three_prime_UTR 30.0%
!! ATCGACGTTGATGAAAATTT+TGG + chr7_4:36214535-36214554 None:intergenic 30.0%
! AAATTTTGAGCAATCCTTCT+AGG - chr7_4:36214565-36214584 Msa1151630:three_prime_UTR 30.0%
!!! CAGCCTATTTTTATGCATTT+TGG + chr7_4:36214706-36214725 None:intergenic 30.0%
ATAGGCTGTGTTAAAGTAAA+AGG - chr7_4:36214718-36214737 Msa1151630:three_prime_UTR 30.0%
AATGATTACATGCAATCGAA+GGG - chr7_4:36214976-36214995 Msa1151630:three_prime_UTR 30.0%
GGGTGACAATATAAAATTAG+TGG + chr7_4:36215061-36215080 None:intergenic 30.0%
!! TTCCACACAACAAGTTTTAT+TGG - chr7_4:36215111-36215130 Msa1151630:three_prime_UTR 30.0%
ATTACCTAAGAAGTAAGTTG+GGG + chr7_4:36215759-36215778 None:intergenic 30.0%
ATTCTATCCTTACTGATCAA+AGG - chr7_4:36215869-36215888 Msa1151630:three_prime_UTR 30.0%
ATTCATTCCTTTGATCAGTA+AGG + chr7_4:36215879-36215898 None:intergenic 30.0%
! TGATGCTTATCTGAAATTTG+AGG + chr7_4:36215907-36215926 None:intergenic 30.0%
!! TCAGATAAGCATCACTTTTA+TGG - chr7_4:36215913-36215932 Msa1151630:three_prime_UTR 30.0%
!! ATAAGCATCACTTTTATGGA+CGG - chr7_4:36215917-36215936 Msa1151630:three_prime_UTR 30.0%
! CGGACACACATTTAATTTAA+TGG - chr7_4:36215937-36215956 Msa1151630:three_prime_UTR 30.0%
!! ACGTTTTGTTGTAAGATCAA+TGG + chr7_4:36215997-36216016 None:intergenic 30.0%
AGAAATATGAAGAGCTTAGT+AGG - chr7_4:36216022-36216041 Msa1151630:three_prime_UTR 30.0%
TTAATGTGATGTGTTGTGAA+GGG - chr7_4:36213889-36213908 Msa1151630:three_prime_UTR 30.0%
! TAACACTGATTGTTGTGAAT+GGG - chr7_4:36216220-36216239 Msa1151630:intron 30.0%
TTCATCAATATGCCTTTACT+GGG - chr7_4:36216291-36216310 Msa1151630:intron 30.0%
TTCATGAGTTCTTGTACAAT+TGG + chr7_4:36216393-36216412 None:intergenic 30.0%
AATTGTACAAGAACTCATGA+AGG - chr7_4:36216392-36216411 Msa1151630:three_prime_UTR 30.0%
CAAAAGAGTCTGAAAATCTA+TGG + chr7_4:36216759-36216778 None:intergenic 30.0%
! CATAGATTTTCAGACTCTTT+TGG - chr7_4:36216757-36216776 Msa1151630:intron 30.0%
! AATTGTTGTTACCTATGTCA+AGG + chr7_4:36216817-36216836 None:intergenic 30.0%
! AGTGTTATTGAAGTTGTTGT+TGG + chr7_4:36217047-36217066 None:intergenic 30.0%
!! TTAAACTTTTGAGGGAAGAA+AGG + chr7_4:36217093-36217112 None:intergenic 30.0%
TGCTAGATATATCAAAACTG+AGG - chr7_4:36217250-36217269 Msa1151630:three_prime_UTR 30.0%
TATATCAAAACTGAGGTCTT+TGG - chr7_4:36217257-36217276 Msa1151630:three_prime_UTR 30.0%
AATTTGAACTTATTGCCTCT+AGG - chr7_4:36217303-36217322 Msa1151630:intron 30.0%
CAGAGAATCATAGATTTGTA+CGG - chr7_4:36217418-36217437 Msa1151630:intron 30.0%
GACAATACATAGTATATGCA+AGG - chr7_4:36217743-36217762 Msa1151630:intron 30.0%
ACAACGGATAAATAGAAGAA+TGG + chr7_4:36217877-36217896 None:intergenic 30.0%
TTCTTCTATTTATCCGTTGT+AGG - chr7_4:36217877-36217896 Msa1151630:intron 30.0%
TCTTCTATTTATCCGTTGTA+GGG - chr7_4:36217878-36217897 Msa1151630:intron 30.0%
!! AGTTGTTCCTAAAGGTATTT+AGG - chr7_4:36217960-36217979 Msa1151630:intron 30.0%
TTGAATGCCTAAATACCTTT+AGG + chr7_4:36217970-36217989 None:intergenic 30.0%
! TGGCACCTTTGAATTTTATT+GGG - chr7_4:36218020-36218039 Msa1151630:three_prime_UTR 30.0%
CAGTACCCAATAAAATTCAA+AGG + chr7_4:36218028-36218047 None:intergenic 30.0%
! CATTATTTCTTAAACACTCC+AGG + chr7_4:36218055-36218074 None:intergenic 30.0%
! CTGGAGTGTTTAAGAAATAA+TGG - chr7_4:36218053-36218072 Msa1151630:three_prime_UTR 30.0%
AAGTAAGACTCCTAATAGAT+GGG + chr7_4:36218340-36218359 None:intergenic 30.0%
AAAGTAAGACTCCTAATAGA+TGG + chr7_4:36218341-36218360 None:intergenic 30.0%
ATTAGGAGTCTTACTTTGAA+AGG - chr7_4:36218344-36218363 Msa1151630:intron 30.0%
TTGAAAGGAAACGAGTTTAA+AGG - chr7_4:36218359-36218378 Msa1151630:intron 30.0%
TGAAAGGAAACGAGTTTAAA+GGG - chr7_4:36218360-36218379 Msa1151630:intron 30.0%
!!! TGCTTATATTTTGAAACGGA+GGG + chr7_4:36218541-36218560 None:intergenic 30.0%
!!! TTGCTTATATTTTGAAACGG+AGG + chr7_4:36218540-36218559 None:intergenic 30.0%
GATGTATGTGGTTCATAATA+TGG + chr7_4:36218491-36218510 None:intergenic 30.0%
!!! TGCTTATATTTTGAAACGGA+TGG - chr7_4:36218541-36218560 Msa1151630:intron 30.0%
CTACACACAAAACAAAAGAT+GGG + chr7_4:36219076-36219095 None:intergenic 30.0%
TTTCCGTGGTTTAAGTAATT+TGG - chr7_4:36219097-36219116 Msa1151630:intron 30.0%
! TTTATCCCACAACGATTTTA+TGG - chr7_4:36219429-36219448 Msa1151630:three_prime_UTR 30.0%
! TTATCCCACAACGATTTTAT+GGG - chr7_4:36219430-36219449 Msa1151630:three_prime_UTR 30.0%
TCATGTTAACAAAAGATGAG+GGG + chr7_4:36219462-36219481 None:intergenic 30.0%
GTCATGTTAACAAAAGATGA+GGG + chr7_4:36219463-36219482 None:intergenic 30.0%
TGTCATGTTAACAAAAGATG+AGG + chr7_4:36219464-36219483 None:intergenic 30.0%
TTGTTAACATGACATCACTT+AGG - chr7_4:36219470-36219489 Msa1151630:three_prime_UTR 30.0%
ACGAAATAGGGAATTCAAAT+TGG + chr7_4:36219588-36219607 None:intergenic 30.0%
GAAAATTGTGTGAACGAAAT+AGG + chr7_4:36219601-36219620 None:intergenic 30.0%
CATTACCATAGATGAACTTA+AGG + chr7_4:36219636-36219655 None:intergenic 30.0%
CTTAAGTTCATCTATGGTAA+TGG - chr7_4:36219634-36219653 Msa1151630:CDS 30.0%
AGCACTTGCAATTGAAATTT+GGG + chr7_4:36219706-36219725 None:intergenic 30.0%
AAGCACTTGCAATTGAAATT+TGG + chr7_4:36219707-36219726 None:intergenic 30.0%
AAACTGGAAATTTCCTACAA+AGG + chr7_4:36219899-36219918 None:intergenic 30.0%
ATGTCTAGAAATGCAATTCA+CGG - chr7_4:36220133-36220152 Msa1151630:intron 30.0%
GAAATACCAAATAACTTACC+TGG - chr7_4:36220229-36220248 Msa1151630:intron 30.0%
TGACCCTTCAAAATGATTAT+TGG + chr7_4:36220440-36220459 None:intergenic 30.0%
CTTTCACAAAACAATTTGTC+AGG - chr7_4:36220505-36220524 Msa1151630:intron 30.0%
GAAATTTCAAGCTGGTATAA+CGG + chr7_4:36220708-36220727 None:intergenic 30.0%
ATGAAAGGTAATTACTTCAC+AGG - chr7_4:36220733-36220752 Msa1151630:intron 30.0%
TGAAAGGTAATTACTTCACA+GGG - chr7_4:36220734-36220753 Msa1151630:intron 30.0%
GTATATCTAAATCAGTAAGG+TGG + chr7_4:36220780-36220799 None:intergenic 30.0%
AGTTTCAGTGAATCCTTATA+TGG - chr7_4:36220886-36220905 Msa1151630:intron 30.0%
ATATATCTCTCCACCATATA+AGG + chr7_4:36220902-36220921 None:intergenic 30.0%
GAGAGATATATCACAGATTT+GGG - chr7_4:36220911-36220930 Msa1151630:intron 30.0%
! TGTCCAACAATTTTCTTATC+GGG - chr7_4:36221088-36221107 Msa1151630:intron 30.0%
TTTCCCGATAAGAAAATTGT+TGG + chr7_4:36221094-36221113 None:intergenic 30.0%
AAATTCCTCATCAACTAAGT+GGG - chr7_4:36221184-36221203 Msa1151630:intron 30.0%
TTCTGTACATCAATCCTTAT+TGG - chr7_4:36221490-36221509 Msa1151630:intron 30.0%
!! ATGGTTTTACTATATAGGAC+TGG - chr7_4:36221521-36221540 Msa1151630:intron 30.0%
!! TTTTACTATATAGGACTGGT+GGG - chr7_4:36221525-36221544 Msa1151630:intron 30.0%
TTGGAAATGTATTACATGTG+AGG - chr7_4:36221599-36221618 Msa1151630:CDS 30.0%
CTTAATGTGATGTGTTGTGA+AGG - chr7_4:36213888-36213907 Msa1151630:three_prime_UTR 35.0%
TGGATATTTCAGACCTTGAT+AGG + chr7_4:36214136-36214155 None:intergenic 35.0%
ATCAACCAGGAAAAAAGAGA+TGG + chr7_4:36214768-36214787 None:intergenic 35.0%
TGAGAAGAAGAAGAAGAAGA+TGG - chr7_4:36214934-36214953 Msa1151630:three_prime_UTR 35.0%
GAATGATTACATGCAATCGA+AGG - chr7_4:36214975-36214994 Msa1151630:three_prime_UTR 35.0%
ACCAAGCAATCAAATCAAGT+GGG + chr7_4:36215081-36215100 None:intergenic 35.0%
AACCAAGCAATCAAATCAAG+TGG + chr7_4:36215082-36215101 None:intergenic 35.0%
!! CACCAATAAAACTTGTTGTG+TGG + chr7_4:36215116-36215135 None:intergenic 35.0%
!! GACAAAATGATGATGGTCAT+TGG + chr7_4:36215292-36215311 None:intergenic 35.0%
!! TTATCGAGTTTGTTAACGTG+TGG - chr7_4:36215392-36215411 Msa1151630:three_prime_UTR 35.0%
! CGATGCTTGTCTAAAATTTG+AGG - chr7_4:36215467-36215486 Msa1151630:three_prime_UTR 35.0%
! TTACCTAAGAAGTAAGTTGG+GGG + chr7_4:36215758-36215777 None:intergenic 35.0%
! ATTTGGTTCAGCAAAAGCAA+CGG - chr7_4:36215777-36215796 Msa1151630:three_prime_UTR 35.0%
! AATGACTTGACTTGAAGACT+TGG + chr7_4:36215852-36215871 None:intergenic 35.0%
CTTAATGTGATGTGTTGTGA+AGG - chr7_4:36213888-36213907 Msa1151630:three_prime_UTR 35.0%
GCACTTATTGCTATGTCAAT+GGG - chr7_4:36216185-36216204 Msa1151630:intron 35.0%
TTATTGCTATGTCAATGGGA+AGG - chr7_4:36216189-36216208 Msa1151630:intron 35.0%
! GTAACACTGATTGTTGTGAA+TGG - chr7_4:36216219-36216238 Msa1151630:intron 35.0%
CTTCATCAATATGCCTTTAC+TGG - chr7_4:36216290-36216309 Msa1151630:intron 35.0%
TCATCAATATGCCTTTACTG+GGG - chr7_4:36216292-36216311 Msa1151630:intron 35.0%
ATTCAGTTCCCAAATGCTAT+CGG - chr7_4:36216526-36216545 Msa1151630:intron 35.0%
ATTAGCTGCTATCAGCAATT+CGG - chr7_4:36216594-36216613 Msa1151630:intron 35.0%
AGCAATTCGGTTTCATTTCA+CGG - chr7_4:36216607-36216626 Msa1151630:intron 35.0%
AAAGAAAACTAAAACTGGCC+TGG + chr7_4:36216638-36216657 None:intergenic 35.0%
TCTAGATGTAGCAACTTTGA+TGG + chr7_4:36216791-36216810 None:intergenic 35.0%
ATCAAAGTTGCTACATCTAG+AGG - chr7_4:36216790-36216809 Msa1151630:intron 35.0%
CATGGGATTCAAATCTTTGA+AGG - chr7_4:36216862-36216881 Msa1151630:intron 35.0%
GAACTGCATTTGAATGACAT+TGG - chr7_4:36216884-36216903 Msa1151630:intron 35.0%
GCATTTGAATGACATTGGAT+TGG - chr7_4:36216889-36216908 Msa1151630:intron 35.0%
! TATATTGTGTTACTGCACAC+CGG + chr7_4:36216978-36216997 None:intergenic 35.0%
AATTGTTCTCAGACAAGTCA+AGG + chr7_4:36217287-36217306 None:intergenic 35.0%
AATGATGACAACAAACCTAG+AGG + chr7_4:36217321-36217340 None:intergenic 35.0%
GAAAGAACTTGTAAGCTGAA+TGG + chr7_4:36217444-36217463 None:intergenic 35.0%
AATGGATCGCTAGATATTAG+TGG - chr7_4:36217519-36217538 Msa1151630:intron 35.0%
AACTCCGGCCATAAAAAAAA+AGG - chr7_4:36217777-36217796 Msa1151630:intron 35.0%
! GTCGATTTAGTTGTTCCTAA+AGG - chr7_4:36217952-36217971 Msa1151630:intron 35.0%
! CTGGCACCTTTGAATTTTAT+TGG - chr7_4:36218019-36218038 Msa1151630:three_prime_UTR 35.0%
! ACAATTGGATTACGTTTTCC+AGG - chr7_4:36218227-36218246 Msa1151630:intron 35.0%
! CAATTGGATTACGTTTTCCA+GGG - chr7_4:36218228-36218247 Msa1151630:intron 35.0%
!!! CTGCTTAAATTTTTTGACCC+TGG + chr7_4:36218248-36218267 None:intergenic 35.0%
CAATCTACATGAGTGGTTAT+GGG - chr7_4:36218310-36218329 Msa1151630:intron 35.0%
TTTAAAGGGACAATCCTTGA+TGG - chr7_4:36218374-36218393 Msa1151630:intron 35.0%
TGCAATTATTACCTCCATCA+AGG + chr7_4:36218391-36218410 None:intergenic 35.0%
CCTACACACAAAACAAAAGA+TGG + chr7_4:36219077-36219096 None:intergenic 35.0%
!!! CCATCTTTTGTTTTGTGTGT+AGG - chr7_4:36219074-36219093 Msa1151630:intron 35.0%
! TTTTGTCTGTGTTGAGATGT+GGG - chr7_4:36219198-36219217 Msa1151630:three_prime_UTR 35.0%
ATAAGTGATACCCTTCCAAT+TGG - chr7_4:36219221-36219240 Msa1151630:three_prime_UTR 35.0%
AGAATTACCTCCAATTGGAA+GGG + chr7_4:36219234-36219253 None:intergenic 35.0%
AAGAATTACCTCCAATTGGA+AGG + chr7_4:36219235-36219254 None:intergenic 35.0%
CACTTAAAAGGACATGTTGA+TGG + chr7_4:36219347-36219366 None:intergenic 35.0%
! TATCCCACAACGATTTTATG+GGG - chr7_4:36219431-36219450 Msa1151630:three_prime_UTR 35.0%
TTTCCCCATAAAATCGTTGT+GGG + chr7_4:36219437-36219456 None:intergenic 35.0%
GAAGTAAAACTTGCAAGGTT+AGG + chr7_4:36219538-36219557 None:intergenic 35.0%
CAAGTGAAGTAAAACTTGCA+AGG + chr7_4:36219543-36219562 None:intergenic 35.0%
GAACTTAAGGTTCGAATGAT+TGG + chr7_4:36219623-36219642 None:intergenic 35.0%
TCGAACCTTAAGTTCATCTA+TGG - chr7_4:36219628-36219647 Msa1151630:CDS 35.0%
TCAAAGTTGAGTGTGAATCA+AGG + chr7_4:36219672-36219691 None:intergenic 35.0%
! CACACTCAACTTTGAAAACA+CGG - chr7_4:36219677-36219696 Msa1151630:CDS 35.0%
! ACACTCAACTTTGAAAACAC+GGG - chr7_4:36219678-36219697 Msa1151630:CDS 35.0%
ATTTGGAAGTGGAATAGACT+TGG + chr7_4:36219752-36219771 None:intergenic 35.0%
CCACATAAGTCAAATTGCAT+TGG + chr7_4:36219786-36219805 None:intergenic 35.0%
! CCAATGCAATTTGACTTATG+TGG - chr7_4:36219783-36219802 Msa1151630:intron 35.0%
TTGACTTATGTGGATTTCAC+CGG - chr7_4:36219793-36219812 Msa1151630:intron 35.0%
TAAGAGGAGAGTTTCCAAAT+TGG - chr7_4:36219824-36219843 Msa1151630:intron 35.0%
CTTCAGAATTGTTCCTTTGT+AGG - chr7_4:36219883-36219902 Msa1151630:intron 35.0%
ATTGTTGCCAATTTGAGAAG+AGG + chr7_4:36220031-36220050 None:intergenic 35.0%
GTATCTGACAATGCAATAAC+AGG - chr7_4:36220055-36220074 Msa1151630:intron 35.0%
CAGACAATTCATTACCAAAC+AGG + chr7_4:36220207-36220226 None:intergenic 35.0%
!! CTGTTTGGTAATGAATTGTC+TGG - chr7_4:36220205-36220224 Msa1151630:intron 35.0%
CAAATAACTTACCTGGAGAT+GGG - chr7_4:36220236-36220255 Msa1151630:intron 35.0%
!! TTGACATATTTGTTGTTGGG+TGG - chr7_4:36220274-36220293 Msa1151630:intron 35.0%
!! GCAGAAGTGTTTACAAATGA+AGG + chr7_4:36220538-36220557 None:intergenic 35.0%
GTTGTTACTCAAATGGATAC+TGG + chr7_4:36220563-36220582 None:intergenic 35.0%
! TTATCCAAAAGCACATTCAG+TGG - chr7_4:36220595-36220614 Msa1151630:intron 35.0%
! TATCCAAAAGCACATTCAGT+GGG - chr7_4:36220596-36220615 Msa1151630:intron 35.0%
CATAAGGAGAAATTTCAAGC+TGG + chr7_4:36220716-36220735 None:intergenic 35.0%
!! TAGAATGCCTTTTGAGAATC+TGG - chr7_4:36220849-36220868 Msa1151630:intron 35.0%
! TCACTGAAACTTGTTCTATC+TGG + chr7_4:36220877-36220896 None:intergenic 35.0%
TTCAGTGAATCCTTATATGG+TGG - chr7_4:36220889-36220908 Msa1151630:intron 35.0%
GGAGAGATATATCACAGATT+TGG - chr7_4:36220910-36220929 Msa1151630:intron 35.0%
TCAAGTTTCCTAACTCAGAT+GGG + chr7_4:36221047-36221066 None:intergenic 35.0%
ACTCTCTACTTGTACCAAAT+TGG + chr7_4:36221133-36221152 None:intergenic 35.0%
CTTTCTTTCAACATGTTGAG+TGG - chr7_4:36221159-36221178 Msa1151630:intron 35.0%
!! CACTTAGTTGATGAGGAATT+TGG + chr7_4:36221185-36221204 None:intergenic 35.0%
CAAATTCCTCATCAACTAAG+TGG - chr7_4:36221183-36221202 Msa1151630:intron 35.0%
TGCCATACTGAATACTTCAA+GGG + chr7_4:36221217-36221236 None:intergenic 35.0%
ATGGCACACAACAATTTATC+AGG - chr7_4:36221231-36221250 Msa1151630:intron 35.0%
CTAAATTGTCCTTTCCATTC+AGG + chr7_4:36221264-36221283 None:intergenic 35.0%
ATTTGATGAAAGCAGCTATG+AGG - chr7_4:36221287-36221306 Msa1151630:intron 35.0%
TTTGATGAAAGCAGCTATGA+GGG - chr7_4:36221288-36221307 Msa1151630:intron 35.0%
GAGGGTAATCAATTTCTTTG+TGG - chr7_4:36221306-36221325 Msa1151630:intron 35.0%
!! TTTCCGTGTTAGCTTTATTG+TGG - chr7_4:36221434-36221453 Msa1151630:intron 35.0%
ATGCCACAATAAAGCTAACA+CGG + chr7_4:36221440-36221459 None:intergenic 35.0%
TGTACATCAATCCTTATTGG+CGG - chr7_4:36221493-36221512 Msa1151630:intron 35.0%
!! CAGGCATGGTTTTACTATAT+AGG - chr7_4:36221516-36221535 Msa1151630:intron 35.0%
! GTTTTACTATATAGGACTGG+TGG - chr7_4:36221524-36221543 Msa1151630:intron 35.0%
GAATTGCTACTACTTCATTG+AGG - chr7_4:36221551-36221570 Msa1151630:CDS 35.0%
AAATGTATTACATGTGAGGC+TGG - chr7_4:36221603-36221622 Msa1151630:CDS 35.0%
!! ATAGCGCTGATTGTTGTGAA+TGG - chr7_4:36213991-36214010 Msa1151630:three_prime_UTR 40.0%
!! TAGCGCTGATTGTTGTGAAT+GGG - chr7_4:36213992-36214011 Msa1151630:three_prime_UTR 40.0%
GGAAGATTGAAGTGTGAGTT+TGG + chr7_4:36214054-36214073 None:intergenic 40.0%
! CCAACAACTTAGGCTCTTTT+TGG + chr7_4:36214402-36214421 None:intergenic 40.0%
CCAAAAAGAGCCTAAGTTGT+TGG - chr7_4:36214399-36214418 Msa1151630:three_prime_UTR 40.0%
CAAAAATCAGGCATCCTAGA+AGG + chr7_4:36214582-36214601 None:intergenic 40.0%
!!! AAGCACCATCTCTTTTTTCC+TGG - chr7_4:36214760-36214779 Msa1151630:three_prime_UTR 40.0%
CATGATTCATGCAATCAACC+AGG + chr7_4:36214781-36214800 None:intergenic 40.0%
TGCATGAATCATGCGATTGA+AGG - chr7_4:36214788-36214807 Msa1151630:three_prime_UTR 40.0%
! ACCCACTTGATTTGATTGCT+TGG - chr7_4:36215077-36215096 Msa1151630:three_prime_UTR 40.0%
!! TGATGATGGTCATTGGTCAT+TGG + chr7_4:36215285-36215304 None:intergenic 40.0%
! TTGGAAATTAGGAGCGTGTT+TGG - chr7_4:36215610-36215629 Msa1151630:intron 40.0%
AAACCCCCAACTTACTTCTT+AGG - chr7_4:36215752-36215771 Msa1151630:three_prime_UTR 40.0%
CGCACTTATTGCTATGTCAA+TGG - chr7_4:36216184-36216203 Msa1151630:intron 40.0%
ACTGATTGTTGTGAATGGGA+AGG - chr7_4:36216224-36216243 Msa1151630:intron 40.0%
TTTGAATGTAACACCACCAC+CGG - chr7_4:36216248-36216267 Msa1151630:intron 40.0%
! TTTGAGTTTGGTGACTCTTC+CGG + chr7_4:36216270-36216289 None:intergenic 40.0%
CATCAATATGCCTTTACTGG+GGG - chr7_4:36216293-36216312 Msa1151630:intron 40.0%
TTGTGCAGGGTTGAACAATT+TGG - chr7_4:36216483-36216502 Msa1151630:intron 40.0%
TGAAATCCTACCATCAGTCA+TGG - chr7_4:36216844-36216863 Msa1151630:intron 40.0%
GAAATCCTACCATCAGTCAT+GGG - chr7_4:36216845-36216864 Msa1151630:intron 40.0%
GATTTGAATCCCATGACTGA+TGG + chr7_4:36216857-36216876 None:intergenic 40.0%
! AATGACATTGGATTGGACTC+AGG - chr7_4:36216896-36216915 Msa1151630:intron 40.0%
! GACTCAGGTCTTCATTTTCA+AGG - chr7_4:36216911-36216930 Msa1151630:intron 40.0%
! ACTGCACACCGGTTATAAAA+TGG + chr7_4:36216967-36216986 None:intergenic 40.0%
! AGTTGTTGTTGGAGATGTCA+AGG + chr7_4:36217036-36217055 None:intergenic 40.0%
ACTGATATTGCATCTGCTCT+TGG - chr7_4:36217064-36217083 Msa1151630:intron 40.0%
CAAGTTCTTTCGTACCTAAG+TGG - chr7_4:36217453-36217472 Msa1151630:intron 40.0%
AAGTCAAGAGATGTGAGAAG+TGG + chr7_4:36217483-36217502 None:intergenic 40.0%
TTAAGTCGCACCAACTTGAA+TGG - chr7_4:36217501-36217520 Msa1151630:intron 40.0%
ATCTAGCGATCCATTCAAGT+TGG + chr7_4:36217514-36217533 None:intergenic 40.0%
TAGCAACTGAACTAAGCTAC+GGG + chr7_4:36217721-36217740 None:intergenic 40.0%
CTAGCAACTGAACTAAGCTA+CGG + chr7_4:36217722-36217741 None:intergenic 40.0%
GTAGCTTAGTTCAGTTGCTA+GGG - chr7_4:36217721-36217740 Msa1151630:intron 40.0%
! AAGGTCTGAGATTCAAACTC+CGG - chr7_4:36217762-36217781 Msa1151630:intron 40.0%
TAAAGTCGACAACCCTACAA+CGG + chr7_4:36217893-36217912 None:intergenic 40.0%
!! TTTATTGGGTACTGAAAGCC+TGG - chr7_4:36218034-36218053 Msa1151630:three_prime_UTR 40.0%
ATGGAAGCAATCTACATGAG+TGG - chr7_4:36218303-36218322 Msa1151630:intron 40.0%
GCAATCTACATGAGTGGTTA+TGG - chr7_4:36218309-36218328 Msa1151630:intron 40.0%
TATGGGCTTTCCCATCTATT+AGG - chr7_4:36218327-36218346 Msa1151630:intron 40.0%
TTTGTTAACAACTGCAGTCG+AGG - chr7_4:36218680-36218699 Msa1151630:three_prime_UTR 40.0%
! GTTTTGTCTGTGTTGAGATG+TGG - chr7_4:36219197-36219216 Msa1151630:three_prime_UTR 40.0%
TTGGTCTAAGCTTAAGCAGT+TGG - chr7_4:36219396-36219415 Msa1151630:three_prime_UTR 40.0%
GTTTCCCCATAAAATCGTTG+TGG + chr7_4:36219438-36219457 None:intergenic 40.0%
! TTCACCGGTTGTAAACTAAG+AGG - chr7_4:36219808-36219827 Msa1151630:intron 40.0%
CTCTCCTCTTAGTTTACAAC+CGG + chr7_4:36219815-36219834 None:intergenic 40.0%
AATTTGAGAAGAGGACGAGA+TGG + chr7_4:36220022-36220041 None:intergenic 40.0%
ATCTCGTCCTCTTCTCAAAT+TGG - chr7_4:36220021-36220040 Msa1151630:intron 40.0%
! AAACCTCTAAGGAGCTTAAG+TGG + chr7_4:36220180-36220199 None:intergenic 40.0%
! CTTAAGCTCCTTAGAGGTTT+TGG - chr7_4:36220180-36220199 Msa1151630:intron 40.0%
AAACAGGTCCAAAACCTCTA+AGG + chr7_4:36220191-36220210 None:intergenic 40.0%
!!! TTAGAGGTTTTGGACCTGTT+TGG - chr7_4:36220190-36220209 Msa1151630:intron 40.0%
CCATCTCCAGGTAAGTTATT+TGG + chr7_4:36220238-36220257 None:intergenic 40.0%
CCAAATAACTTACCTGGAGA+TGG - chr7_4:36220235-36220254 Msa1151630:intron 40.0%
! TTGGGTGGAAATAGCCTTTT+TGG - chr7_4:36220289-36220308 Msa1151630:intron 40.0%
TACTTGGGATGCTACCAAAA+AGG + chr7_4:36220306-36220325 None:intergenic 40.0%
TTAAGTTCTGCAACCTCTGA+TGG + chr7_4:36220466-36220485 None:intergenic 40.0%
GTTACTCAAATGGATACTGG+TGG + chr7_4:36220560-36220579 None:intergenic 40.0%
! ATCCAAAAGCACATTCAGTG+GGG - chr7_4:36220597-36220616 Msa1151630:intron 40.0%
! CTAATGTCTAGAGTCAGTAG+GGG + chr7_4:36220640-36220659 None:intergenic 40.0%
! GCTAATGTCTAGAGTCAGTA+GGG + chr7_4:36220641-36220660 None:intergenic 40.0%
! TGCTAATGTCTAGAGTCAGT+AGG + chr7_4:36220642-36220661 None:intergenic 40.0%
ATTTCAAGCTGGTATAACGG+AGG + chr7_4:36220705-36220724 None:intergenic 40.0%
GTAAGGTGGCATAATTGCTT+CGG + chr7_4:36220766-36220785 None:intergenic 40.0%
TGGGGAAATACCTAGATGTT+TGG - chr7_4:36220825-36220844 Msa1151630:intron 40.0%
GGGGAAATACCTAGATGTTT+GGG - chr7_4:36220826-36220845 Msa1151630:intron 40.0%
TCTGGATCCAGATTCTCAAA+AGG + chr7_4:36220859-36220878 None:intergenic 40.0%
GTCAAGTTTCCTAACTCAGA+TGG + chr7_4:36221048-36221067 None:intergenic 40.0%
TCCAGCTACATTCTCCAATT+TGG - chr7_4:36221116-36221135 Msa1151630:intron 40.0%
ACCAAATTGGAGAATGTAGC+TGG + chr7_4:36221120-36221139 None:intergenic 40.0%
CATACTGAATACTTCAAGGG+AGG + chr7_4:36221214-36221233 None:intergenic 40.0%
! CTCCCTTGAAGTATTCAGTA+TGG - chr7_4:36221212-36221231 Msa1151630:intron 40.0%
GTGCCATACTGAATACTTCA+AGG + chr7_4:36221218-36221237 None:intergenic 40.0%
! CCACTTGGATTGCAACTTTT+TGG + chr7_4:36221342-36221361 None:intergenic 40.0%
CCAAAAAGTTGCAATCCAAG+TGG - chr7_4:36221339-36221358 Msa1151630:intron 40.0%
! AAGGCATTTGGCAATGTAGA+AGG + chr7_4:36221372-36221391 None:intergenic 40.0%
AGGAAGGAGATGATGATAGT+TGG - chr7_4:36221397-36221416 Msa1151630:intron 40.0%
GGAAGGAGATGATGATAGTT+GGG - chr7_4:36221398-36221417 Msa1151630:intron 40.0%
GGCATACACATCAATAGTGT+TGG - chr7_4:36221455-36221474 Msa1151630:intron 40.0%
GGATTGATGTACAGAACAGT+TGG + chr7_4:36221486-36221505 None:intergenic 40.0%
! TGATGTGTTGTGAAGGGTGT+TGG - chr7_4:36213895-36213914 Msa1151630:three_prime_UTR 45.0%
GCTGATTGTTGTGAATGGGA+CGG - chr7_4:36213996-36214015 Msa1151630:three_prime_UTR 45.0%
! TGTGAGTTTGGTGACTCTTC+CGG + chr7_4:36214042-36214061 None:intergenic 45.0%
TGACAACTCTCGACCTATCA+AGG - chr7_4:36214120-36214139 Msa1151630:three_prime_UTR 45.0%
!! GAGTTTGTTAACGTGTGGCA+CGG - chr7_4:36215397-36215416 Msa1151630:three_prime_UTR 45.0%
ACGGATGGAAGTCTTCAACA+CGG - chr7_4:36215796-36215815 Msa1151630:three_prime_UTR 45.0%
! TGATGTGTTGTGAAGGGTGT+TGG - chr7_4:36213895-36213914 Msa1151630:three_prime_UTR 45.0%
TGGATATTCCAGACGCTGAT+AGG + chr7_4:36216373-36216392 None:intergenic 45.0%
ACAGAACGCCGATAGCATTT+GGG + chr7_4:36216537-36216556 None:intergenic 45.0%
TGGAAGGACTTTCTTCTCTC+AGG - chr7_4:36216563-36216582 Msa1151630:intron 45.0%
TTCGGTTTCATTTCACGGTG+AGG - chr7_4:36216612-36216631 Msa1151630:intron 45.0%
CATCTAGAGGTCCTTGACAT+AGG - chr7_4:36216803-36216822 Msa1151630:intron 45.0%
TGAATCCCATGACTGATGGT+AGG + chr7_4:36216853-36216872 None:intergenic 45.0%
GATATTGCATCTGCTCTTGG+TGG - chr7_4:36217067-36217086 Msa1151630:intron 45.0%
TGAGAAGTGGAAGACCACTT+AGG + chr7_4:36217470-36217489 None:intergenic 45.0%
AGCAACTGAACTAAGCTACG+GGG + chr7_4:36217720-36217739 None:intergenic 45.0%
CGTAGCTTAGTTCAGTTGCT+AGG - chr7_4:36217720-36217739 Msa1151630:intron 45.0%
AAAGGGACAATCCTTGATGG+AGG - chr7_4:36218377-36218396 Msa1151630:intron 45.0%
! GTTTTGTGTGTAGGTTTCCG+TGG - chr7_4:36219083-36219102 Msa1151630:intron 45.0%
AGTGATACCCTTCCAATTGG+AGG - chr7_4:36219224-36219243 Msa1151630:three_prime_UTR 45.0%
GCTTAAGCAGTTGGAAGAGT+TGG - chr7_4:36219405-36219424 Msa1151630:three_prime_UTR 45.0%
CTTAAGTGGCTTAGCTCATG+AGG + chr7_4:36220166-36220185 None:intergenic 45.0%
AAGCCACTTAAGCTCCTTAG+AGG - chr7_4:36220174-36220193 Msa1151630:intron 45.0%
TGAAGGGTCAATTCCATCAG+AGG - chr7_4:36220450-36220469 Msa1151630:intron 45.0%
! ATCCCCACTGAATGTGCTTT+TGG + chr7_4:36220602-36220621 None:intergenic 45.0%
GGCATTCTACCCAAACATCT+AGG + chr7_4:36220838-36220857 None:intergenic 45.0%
! GTCAACCCACTTAGTTGATG+AGG + chr7_4:36221192-36221211 None:intergenic 45.0%
TATCAGGTGCAACACCTGAA+TGG - chr7_4:36221247-36221266 Msa1151630:intron 45.0%
!! TTGCAACTTTTTGGCAGTGG+AGG + chr7_4:36221333-36221352 None:intergenic 45.0%
!! GGATTGCAACTTTTTGGCAG+TGG + chr7_4:36221336-36221355 None:intergenic 45.0%
GTAGAAGGTTCTTCTCCACT+TGG + chr7_4:36221357-36221376 None:intergenic 45.0%
ATTGCCAAATGCCTTGAACG+AGG - chr7_4:36221377-36221396 Msa1151630:intron 45.0%
ATCATCTCCTTCCTCGTTCA+AGG + chr7_4:36221391-36221410 None:intergenic 45.0%
AGGAGATGATGATAGTTGGG+TGG - chr7_4:36221401-36221420 Msa1151630:intron 45.0%
!! AGTTAAATATTTAATAAATT+AGG - chr7_4:36215507-36215526 Msa1151630:three_prime_UTR 5.0%
!!! ATTTTTTTTTTTTTTTGATA+AGG + chr7_4:36217579-36217598 None:intergenic 5.0%
!! TATCAAAAAAAAAAAAAAAT+TGG - chr7_4:36217579-36217598 Msa1151630:intron 5.0%
!! TTATCATAAATTAAAATAAT+CGG + chr7_4:36218167-36218186 None:intergenic 5.0%
GTTGAATGCAACACCACCAC+CGG - chr7_4:36214020-36214039 Msa1151630:three_prime_UTR 50.0%
!! GAGCGTGTTTGGTGCTCATT+AGG - chr7_4:36215621-36215640 Msa1151630:intron 50.0%
GGTTCAGCAAAAGCAACGGA+TGG - chr7_4:36215781-36215800 Msa1151630:three_prime_UTR 50.0%
CAATATGCCTTTACTGGGGG+TGG - chr7_4:36216296-36216315 Msa1151630:intron 50.0%
AAGTGATCCACCCCCAGTAA+AGG + chr7_4:36216306-36216325 None:intergenic 50.0%
AATCTCGACCTATCAGCGTC+TGG - chr7_4:36216362-36216381 Msa1151630:three_prime_UTR 50.0%
GACAGAACGCCGATAGCATT+TGG + chr7_4:36216538-36216557 None:intergenic 50.0%
TATCGGCGTTCTGTCTTGTG+TGG - chr7_4:36216543-36216562 Msa1151630:intron 50.0%
TTTCATTTCACGGTGAGGCC+AGG - chr7_4:36216617-36216636 Msa1151630:intron 50.0%
! ATGAGTTGACTCCCATCTCC+AGG + chr7_4:36220250-36220269 None:intergenic 50.0%
! TCTAGAGTCAGTAGGGGAGA+AGG + chr7_4:36220634-36220653 None:intergenic 50.0%
GGTAGCATCCCATCTGAGTT+AGG - chr7_4:36221036-36221055 Msa1151630:intron 50.0%
GGTGCAACACCTGAATGGAA+AGG - chr7_4:36221252-36221271 Msa1151630:intron 50.0%
! CCTTCCTCGTTCAAGGCATT+TGG + chr7_4:36221384-36221403 None:intergenic 50.0%
CCAAATGCCTTGAACGAGGA+AGG - chr7_4:36221381-36221400 Msa1151630:intron 50.0%
CATCAATCCTTATTGGCGGC+AGG - chr7_4:36221497-36221516 Msa1151630:intron 50.0%
! TTTGGTGACTCTTCCGGTGG+TGG + chr7_4:36214036-36214055 None:intergenic 55.0%
! GAGTTTGGTGACTCTTCCGG+TGG + chr7_4:36214039-36214058 None:intergenic 55.0%
! TTTGGTGACTCTTCCGGTGG+TGG + chr7_4:36214036-36214055 None:intergenic 55.0%
! GAGTTTGGTGACTCTTCCGG+TGG + chr7_4:36214039-36214058 None:intergenic 55.0%
GGCGTTCTGTCTTGTGTGGA+AGG - chr7_4:36216547-36216566 Msa1151630:intron 55.0%
ATCCTTATTGGCGGCAGGCA+TGG - chr7_4:36221502-36221521 Msa1151630:intron 55.0%
AACCATGCCTGCCGCCAATA+AGG + chr7_4:36221507-36221526 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 36213843 36221714 36213843 ID=Msa1151630;Name=Msa1151630
chr7_4 mRNA 36213843 36221714 36213843 ID=Msa1151630-mRNA-1;Parent=Msa1151630;Name=Msa1151630-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0.90|0.91|1|0.81|0.66|12|3680|117
chr7_4 exon 36213843 36215538 36213843 ID=Msa1151630-mRNA-1:exon:8526;Parent=Msa1151630-mRNA-1
chr7_4 exon 36215639 36216162 36215639 ID=Msa1151630-mRNA-1:exon:8525;Parent=Msa1151630-mRNA-1
chr7_4 exon 36216312 36216461 36216312 ID=Msa1151630-mRNA-1:exon:8524;Parent=Msa1151630-mRNA-1
chr7_4 exon 36217159 36217308 36217159 ID=Msa1151630-mRNA-1:exon:8523;Parent=Msa1151630-mRNA-1
chr7_4 exon 36217584 36217658 36217584 ID=Msa1151630-mRNA-1:exon:8522;Parent=Msa1151630-mRNA-1
chr7_4 exon 36218017 36218136 36218017 ID=Msa1151630-mRNA-1:exon:8521;Parent=Msa1151630-mRNA-1
chr7_4 exon 36218233 36218301 36218233 ID=Msa1151630-mRNA-1:exon:8520;Parent=Msa1151630-mRNA-1
chr7_4 exon 36218406 36218543 36218406 ID=Msa1151630-mRNA-1:exon:8519;Parent=Msa1151630-mRNA-1
chr7_4 exon 36218625 36218795 36218625 ID=Msa1151630-mRNA-1:exon:8518;Parent=Msa1151630-mRNA-1
chr7_4 exon 36218929 36219066 36218929 ID=Msa1151630-mRNA-1:exon:8517;Parent=Msa1151630-mRNA-1
chr7_4 exon 36219144 36219769 36219144 ID=Msa1151630-mRNA-1:exon:8516;Parent=Msa1151630-mRNA-1
chr7_4 exon 36221538 36221714 36221538 ID=Msa1151630-mRNA-1:exon:8515;Parent=Msa1151630-mRNA-1
chr7_4 CDS 36221538 36221714 36221538 ID=Msa1151630-mRNA-1:cds;Parent=Msa1151630-mRNA-1
chr7_4 CDS 36219593 36219769 36219593 ID=Msa1151630-mRNA-1:cds;Parent=Msa1151630-mRNA-1
chr7_4 three_prime_UTR 36219144 36219592 36219144 ID=Msa1151630-mRNA-1:three_prime_utr;Parent=Msa1151630-mRNA-1
chr7_4 three_prime_UTR 36218929 36219066 36218929 ID=Msa1151630-mRNA-1:three_prime_utr;Parent=Msa1151630-mRNA-1
chr7_4 three_prime_UTR 36218625 36218795 36218625 ID=Msa1151630-mRNA-1:three_prime_utr;Parent=Msa1151630-mRNA-1
chr7_4 three_prime_UTR 36218406 36218543 36218406 ID=Msa1151630-mRNA-1:three_prime_utr;Parent=Msa1151630-mRNA-1
chr7_4 three_prime_UTR 36218233 36218301 36218233 ID=Msa1151630-mRNA-1:three_prime_utr;Parent=Msa1151630-mRNA-1
chr7_4 three_prime_UTR 36218017 36218136 36218017 ID=Msa1151630-mRNA-1:three_prime_utr;Parent=Msa1151630-mRNA-1
chr7_4 three_prime_UTR 36217584 36217658 36217584 ID=Msa1151630-mRNA-1:three_prime_utr;Parent=Msa1151630-mRNA-1
chr7_4 three_prime_UTR 36217159 36217308 36217159 ID=Msa1151630-mRNA-1:three_prime_utr;Parent=Msa1151630-mRNA-1
chr7_4 three_prime_UTR 36216312 36216461 36216312 ID=Msa1151630-mRNA-1:three_prime_utr;Parent=Msa1151630-mRNA-1
chr7_4 three_prime_UTR 36215639 36216162 36215639 ID=Msa1151630-mRNA-1:three_prime_utr;Parent=Msa1151630-mRNA-1
chr7_4 three_prime_UTR 36213843 36215538 36213843 ID=Msa1151630-mRNA-1:three_prime_utr;Parent=Msa1151630-mRNA-1
Gene Sequence

>Msa1151630

ATGAAGAGCTTAGTAGGTGCCGTGTTTTTGTTACTTTTTGTTTTACTTAATGTGATGTGTTGTGAAGGGTGTTGGAAGCAAGAGAGAGAAGCTCTTATTGCTATGAAGTCCAGTTTGAGAAGCTATAAATATTATACTTTTGCTACAGATAGCGCTGATTGTTGTGAATGGGACGGACAAAAGCAACGGATGGAAGTCTTCAACACGGCGCGTACAATAGAAACAACTGAGTTGACTGCCAAGTCTTCAAGTCAAGTCATTCTATCCTTACTGATCAAAGGAATGAATTATATCCTCAAATTTCAGATAAGCATCACTTTTATGGACGGACACACATTTAATTTAATGGAATGA

Protein sequence

>Msa1151630

MKSLVGAVFLLLFVLLNVMCCEGCWKQEREALIAMKSSLRSYKYYTFATDSADCCEWDGQKQRMEVFNTARTIETTELTAKSSSQVILSLLIKGMNYILKFQISITFMDGHTFNLME*