Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0135500 | Msa1153510 | 0.848046 | 7.864488e-60 | -8.615850e-47 |
| Msa0222760 | Msa1153510 | 0.860851 | 1.548039e-63 | -8.615850e-47 |
| Msa0309150 | Msa1153510 | 0.870703 | 1.194650e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 83 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTATTTCTAACAATT+TGG | 0.142230 | 7_4:-40328988 | Msa1153510:five_prime_UTR |
| TCATCTATGTCAATGTCTTT+TGG | 0.217326 | 7_4:-40326895 | Msa1153510:three_prime_UTR |
| GTGCAGTTTATGTGATTATT+TGG | 0.263537 | 7_4:-40330854 | Msa1153510:five_prime_UTR |
| TAACTATTTATTCATTCTTT+TGG | 0.266171 | 7_4:+40326968 | Msa1153490:intron |
| ATAGATCGACGCCGGAAAAT+TGG | 0.281594 | 7_4:+40331461 | Msa1153490:intron |
| AAACTGCACTGTCTTTATAA+AGG | 0.296210 | 7_4:+40330868 | Msa1153490:intron |
| TTGCTGAGAGTAAACTTCTT+TGG | 0.302363 | 7_4:-40329168 | Msa1153510:five_prime_UTR |
| GTTGTGGTTGTTGGTGAATC+AGG | 0.314504 | 7_4:+40329063 | Msa1153490:intron |
| ATCAGAACTGCAATTGATAT+TGG | 0.325051 | 7_4:-40330041 | Msa1153510:five_prime_UTR |
| TGAATTTGATTAAATTAAAC+AGG | 0.333150 | 7_4:-40330831 | Msa1153510:intron |
| GACATTGATTGAGATCATAT+TGG | 0.347392 | 7_4:+40327062 | Msa1153490:intron |
| AGGTCAAGGTTCTCTGCATC+TGG | 0.349914 | 7_4:+40329132 | Msa1153490:intron |
| ATAGACCCACCTTTGATTCC+TGG | 0.357837 | 7_4:+40330062 | Msa1153490:intron |
| GTTCTGTTGGTTGTGGTTGT+TGG | 0.365408 | 7_4:+40329054 | Msa1153490:intron |
| AAGTAGCAGGCCTGCACATC+TGG | 0.365591 | 7_4:-40329028 | Msa1153510:five_prime_UTR |
| GGTGAACGGCGGTGGAAAAT+TGG | 0.381098 | 7_4:+40331482 | Msa1153490:intron |
| GTAATGCTTTCTTGTGTGTC+TGG | 0.386959 | 7_4:+40327036 | Msa1153490:intron |
| CTCTCTGAATCGCGTCCAAC+TGG | 0.394223 | 7_4:-40331009 | Msa1153510:intron |
| AACTGCACTGTCTTTATAAA+GGG | 0.396836 | 7_4:+40330869 | Msa1153490:intron |
| AAAGCATTACATTGCAGGAT+TGG | 0.404999 | 7_4:-40327023 | Msa1153510:CDS |
| GGTGGTGAGTTGAAGGAGGA+AGG | 0.408998 | 7_4:+40331512 | Msa1153490:intron |
| AGAAACGCGTACAGTGGGAG+TGG | 0.410651 | 7_4:+40331537 | Msa1153490:intron |
| ACAAGAAAGCATTACATTGC+AGG | 0.412715 | 7_4:-40327028 | Msa1153510:CDS |
| ATGTGTTTAGGATGCAGATT+GGG | 0.422576 | 7_4:-40331042 | Msa1153510:intron |
| TTTACCTTTCATTTATGTAC+TGG | 0.422959 | 7_4:+40328616 | Msa1153490:intron |
| AGCAGTGACACTTGCGTGTT+TGG | 0.424113 | 7_4:-40329915 | Msa1153510:five_prime_UTR |
| TTGTGCATGTTAGAGTTGTT+TGG | 0.429724 | 7_4:-40326857 | Msa1153510:three_prime_UTR |
| ATTAACGAAAACTTACTCCT+TGG | 0.431112 | 7_4:-40326807 | Msa1153510:three_prime_UTR |
| CGTTTCCTCTCTATTCTCTC+TGG | 0.431757 | 7_4:-40331422 | Msa1153510:five_prime_UTR |
| TTATAATTATGTCATAGTCT+TGG | 0.441239 | 7_4:+40328921 | Msa1153490:intron |
| ACTTTAAGTTCTGTTGGTTG+TGG | 0.451121 | 7_4:+40329047 | Msa1153490:intron |
| GGAAAATTGGTGAACGGCGG+TGG | 0.451680 | 7_4:+40331474 | Msa1153490:intron |
| CCTGCTACTTTAAGTTCTGT+TGG | 0.454245 | 7_4:+40329041 | Msa1153490:intron |
| TGGTGAGTTGAAGGAGGAAG+GGG | 0.460435 | 7_4:+40331514 | Msa1153490:intron |
| TGAAGGCGGTGGTGAGTTGA+AGG | 0.464477 | 7_4:+40331505 | Msa1153490:intron |
| GGTGTAACATGCTGCAACTC+AGG | 0.473231 | 7_4:-40329894 | Msa1153510:intron |
| GATCAGAGATGGATCGGAGA+TGG | 0.477627 | 7_4:-40328643 | Msa1153510:CDS |
| CATGTGTTTAGGATGCAGAT+TGG | 0.480175 | 7_4:-40331043 | Msa1153510:intron |
| TAGACCCACCTTTGATTCCT+GGG | 0.486233 | 7_4:+40330063 | Msa1153490:intron |
| TGTTACAGAGGGATTTCTGA+TGG | 0.496477 | 7_4:-40330893 | Msa1153510:intron |
| TGGAAAATTGGTGAAGGCGG+TGG | 0.507133 | 7_4:+40331494 | Msa1153490:intron |
| GGCGAGGACGGCGAGATTGA+CGG | 0.509255 | 7_4:+40331354 | Msa1153490:intron |
| AACTCTAACATGCACAAAGA+TGG | 0.512557 | 7_4:+40326863 | Msa1153490:intron |
| AGTTGGTTACTAAAGTATGT+TGG | 0.513149 | 7_4:-40327109 | Msa1153510:intron |
| GGCGAGATTGACGGCGAGGA+CGG | 0.517260 | 7_4:+40331342 | Msa1153490:intron |
| CGTCCGTCGCGACCCATCTC+CGG | 0.517830 | 7_4:+40328675 | Msa1153490:intron |
| TAGTCTTGGATGATTTCAAA+AGG | 0.517943 | 7_4:+40328963 | Msa1153490:intron |
| GTGGTGAGTTGAAGGAGGAA+GGG | 0.520390 | 7_4:+40331513 | Msa1153490:intron |
| GTGTTCAACGGCGAGATTGA+CGG | 0.525496 | 7_4:+40331333 | Msa1153490:intron |
| ATCAGAGATGGATCGGAGAT+GGG | 0.543382 | 7_4:-40328642 | Msa1153510:CDS |
| CTGCAATTGATATTGGTTGT+GGG | 0.551899 | 7_4:-40330034 | Msa1153510:five_prime_UTR |
| TACAGTGGGAGTGGGAAAGA+AGG | 0.553012 | 7_4:+40331546 | Msa1153490:intron |
| TTAATGCAAGATCTGATCCC+AGG | 0.555758 | 7_4:-40330080 | Msa1153510:intron |
| ATAGCAGAGACCAGATGTGC+AGG | 0.557264 | 7_4:+40329018 | Msa1153490:intron |
| ACTGCAATTGATATTGGTTG+TGG | 0.558336 | 7_4:-40330035 | Msa1153510:five_prime_UTR |
| TGCGGAGATCAGAGATGGAT+CGG | 0.559175 | 7_4:-40328649 | Msa1153510:CDS |
| GATCTGATCCCAGGAATCAA+AGG | 0.569822 | 7_4:-40330071 | Msa1153510:five_prime_UTR |
| CCAACAGAACTTAAAGTAGC+AGG | 0.571176 | 7_4:-40329041 | Msa1153510:five_prime_UTR |
| AGGCGGTGGTGAGTTGAAGG+AGG | 0.573338 | 7_4:+40331508 | Msa1153490:intron |
| GGGTCGCGACGGACGTGCTG+CGG | 0.574083 | 7_4:-40328667 | Msa1153510:CDS |
| GACGGCGAGATTGACGGCGC+TGG | 0.574936 | 7_4:+40331360 | Msa1153490:intron |
| ATAAATGAAAGGTAAAGTGA+TGG | 0.578660 | 7_4:-40328711 | Msa1153510:five_prime_UTR |
| GGTCAAGGTTCTCTGCATCT+GGG | 0.580936 | 7_4:+40329133 | Msa1153490:intron |
| GTCTCCAGTACATAAATGAA+AGG | 0.584106 | 7_4:-40328722 | Msa1153510:intron |
| TGAAACATAAAGACACAGCT+AGG | 0.592036 | 7_4:+40326938 | Msa1153490:intron |
| CGTGCTGCGGAGATCAGAGA+TGG | 0.597433 | 7_4:-40328654 | Msa1153510:CDS |
| GTCTCCAGTACATAAATGAA+AGG | 0.600118 | 7_4:-40328620 | Msa1153510:intron |
| AGGGGAGAAACGCGTACAGT+GGG | 0.601790 | 7_4:+40331532 | Msa1153490:intron |
| CTGATCCCAGGAATCAAAGG+TGG | 0.603151 | 7_4:-40330068 | Msa1153510:five_prime_UTR |
| AAAGAAGTTTACTCTCAGCA+AGG | 0.612122 | 7_4:+40329170 | Msa1153490:intron |
| CGGTGGAAAATTGGTGAAGG+CGG | 0.617965 | 7_4:+40331491 | Msa1153490:intron |
| GAAACGCGTACAGTGGGAGT+GGG | 0.625806 | 7_4:+40331538 | Msa1153490:intron |
| TGCAATTGATATTGGTTGTG+GGG | 0.628618 | 7_4:-40330033 | Msa1153510:intron |
| AAGGGGAGAAACGCGTACAG+TGG | 0.637071 | 7_4:+40331531 | Msa1153490:intron |
| CGGCGGTGGAAAATTGGTGA+AGG | 0.637441 | 7_4:+40331488 | Msa1153490:intron |
| AGACCGGAGATGGGTCGCGA+CGG | 0.641892 | 7_4:-40328678 | Msa1153510:exon |
| GAGAGAGAATAGATCGACGC+CGG | 0.646401 | 7_4:+40331453 | Msa1153490:intron |
| GACGCCGGAAAATTGGTGAA+CGG | 0.648610 | 7_4:+40331468 | Msa1153490:intron |
| TGATCCCAGGAATCAAAGGT+GGG | 0.659793 | 7_4:-40330067 | Msa1153510:five_prime_UTR |
| GTGGAGATTAGTGTGTTCAA+CGG | 0.674151 | 7_4:+40331321 | Msa1153490:intron |
| GTGTTCCAGAGAGAATAGAG+AGG | 0.683713 | 7_4:+40331417 | Msa1153490:intron |
| CAACGGCGAGATTGACGGCG+AGG | 0.686231 | 7_4:+40331338 | Msa1153490:intron |
| GCCGGAAAATTGGTGAACGG+CGG | 0.696737 | 7_4:+40331471 | Msa1153490:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr7_4:40330049-40330068 | Msa1153510:five_prime_UTR | 0.0% |
| !!! | TTAAACATAAATATTGATTT+AGG | + | chr7_4:40329893-40329912 | Msa1153490:intron | 10.0% |
| !!! | ATTTTTTAAAAAATTATCCA+AGG | - | chr7_4:40330859-40330878 | Msa1153510:five_prime_UTR | 10.0% |
| !! | TAAATAATGAATAACTAAAT+CGG | + | chr7_4:40331149-40331168 | Msa1153490:intron | 10.0% |
| !! | ATAAAAACAAACACAAAAAA+AGG | + | chr7_4:40327030-40327049 | Msa1153490:intron | 15.0% |
| !! | TGAATTTGATTAAATTAAAC+AGG | - | chr7_4:40327446-40327465 | Msa1153510:intron | 15.0% |
| !! | CAAAAGAAAAAAAACATAAA+TGG | + | chr7_4:40327749-40327768 | Msa1153490:intron | 15.0% |
| !!! | TAGCAAAATAATTTTTGAAT+AGG | - | chr7_4:40327901-40327920 | Msa1153510:intron | 15.0% |
| !!! | AAAATAATTTTTGAATAGGA+TGG | - | chr7_4:40327905-40327924 | Msa1153510:intron | 15.0% |
| !! | AATATTCAAAAGTAAAAAGA+AGG | + | chr7_4:40328280-40328299 | Msa1153490:intron | 15.0% |
| !!! | TTTTGAATATTTAGTTTCAA+TGG | - | chr7_4:40328289-40328308 | Msa1153510:intron | 15.0% |
| !!! | TTTATTTTTAACACTTCATT+TGG | - | chr7_4:40328424-40328443 | Msa1153510:intron | 15.0% |
| !!! | TTATTTTGTAGATATTTTTC+AGG | - | chr7_4:40328647-40328666 | Msa1153510:CDS | 15.0% |
| !!! | TTGGTAATAATTTAAGAAAA+TGG | + | chr7_4:40328818-40328837 | Msa1153490:intron | 15.0% |
| !! | TAAACTTGAACATATAATAA+CGG | + | chr7_4:40328975-40328994 | Msa1153490:intron | 15.0% |
| !! | TTAAAAAAATCATATAGTCT+TGG | + | chr7_4:40329331-40329350 | Msa1153490:intron | 15.0% |
| !!! | AAGACTATATGATTTTTTTA+AGG | - | chr7_4:40329330-40329349 | Msa1153510:intron | 15.0% |
| !! | TAGGAATTAACATAATATTT+AGG | - | chr7_4:40330108-40330127 | Msa1153510:intron | 15.0% |
| !! | TATCCAAAATTATAAAAAAG+AGG | - | chr7_4:40330176-40330195 | Msa1153510:intron | 15.0% |
| !!! | TAACCTCTTTTTTATAATTT+TGG | + | chr7_4:40330182-40330201 | Msa1153490:intron | 15.0% |
| !! | TTTATATGTTATGAAGTAAA+TGG | + | chr7_4:40330332-40330351 | Msa1153490:intron | 15.0% |
| !!! | ATTTTTTTTACAAAGAAATG+TGG | - | chr7_4:40330462-40330481 | Msa1153510:intron | 15.0% |
| !!! | TATGATAATTTGAAACATTT+AGG | + | chr7_4:40331121-40331140 | Msa1153490:intron | 15.0% |
| !! | TTAGTTATTCATTATTTAGT+TGG | - | chr7_4:40331151-40331170 | Msa1153510:intron | 15.0% |
| !!! | TAACTATTTATTCATTCTTT+TGG | + | chr7_4:40331312-40331331 | Msa1153490:intron | 15.0% |
| !!! | TTTTCTCTACTTTTTTGATT+TGG | - | chr7_4:40327055-40327074 | Msa1153510:CDS | 20.0% |
| !! | TCAATACACAAAAAAAATTC+TGG | + | chr7_4:40327199-40327218 | Msa1153490:intron | 20.0% |
| !!! | TTTTTTTTGTGTATTGATGT+TGG | - | chr7_4:40327202-40327221 | Msa1153510:intron | 20.0% |
| !!! | ACTTTTTCCTGAAATAATAA+GGG | + | chr7_4:40327882-40327901 | Msa1153490:intron | 20.0% |
| !!! | TACTTTTTCCTGAAATAATA+AGG | + | chr7_4:40327883-40327902 | Msa1153490:intron | 20.0% |
| !! | TTCTAAACTCTATAAAGTAA+AGG | - | chr7_4:40328058-40328077 | Msa1153510:intron | 20.0% |
| !!! | TAATTTTGAGAAAATGCTAA+TGG | - | chr7_4:40328146-40328165 | Msa1153510:intron | 20.0% |
| !! | ATATTGTAAGAAGTCAATTA+AGG | - | chr7_4:40328522-40328541 | Msa1153510:intron | 20.0% |
| !!! | CAATTAAGGATTTTTAGAAA+AGG | - | chr7_4:40328536-40328555 | Msa1153510:intron | 20.0% |
| !!! | TATAAATAAATTTTGTCAGC+CGG | - | chr7_4:40328694-40328713 | Msa1153510:five_prime_UTR | 20.0% |
| !!! | TGCAATTATTTCTAACAATT+TGG | - | chr7_4:40329289-40329308 | Msa1153510:intron | 20.0% |
| !! | TTATAATTATGTCATAGTCT+TGG | + | chr7_4:40329359-40329378 | Msa1153490:intron | 20.0% |
| !! | GAATTTATGTTAATTCATGT+AGG | - | chr7_4:40329420-40329439 | Msa1153510:intron | 20.0% |
| !! | ACTATAATTATGAAATGACA+AGG | + | chr7_4:40329466-40329485 | Msa1153490:intron | 20.0% |
| !!! | AATTCAGAACTTTTATATAC+CGG | - | chr7_4:40329770-40329789 | Msa1153510:intron | 20.0% |
| !!! | AATTAGTCGATTATTGATTT+AGG | + | chr7_4:40329922-40329941 | Msa1153490:intron | 20.0% |
| !!! | TATGATTAGTTTATGAGATT+AGG | - | chr7_4:40330089-40330108 | Msa1153510:intron | 20.0% |
| !!! | ATATTTAGGATGAAAACAAT+TGG | - | chr7_4:40330122-40330141 | Msa1153510:intron | 20.0% |
| !! | TAGAATGATAAATTAGTAAG+AGG | + | chr7_4:40330752-40330771 | Msa1153490:intron | 20.0% |
| !!! | AGTAAGTTTTCGTTAATTAA+TGG | + | chr7_4:40331467-40331486 | Msa1153490:intron | 20.0% |
| !! | TTTTTGTTGATCTCATTTGA+TGG | - | chr7_4:40327120-40327139 | Msa1153510:intron | 25.0% |
| ! | ATATGCATTCAAACATGATT+TGG | + | chr7_4:40327149-40327168 | Msa1153490:intron | 25.0% |
| ! | AAAAAAAAAACCATACCAGT+TGG | + | chr7_4:40327286-40327305 | Msa1153490:intron | 25.0% |
| !!! | TTTTTGCTGTTGTAAATATG+AGG | - | chr7_4:40327314-40327333 | Msa1153510:intron | 25.0% |
| !!! | TATTGTGTTTTTGTTACAGA+GGG | - | chr7_4:40327373-40327392 | Msa1153510:intron | 25.0% |
| !! | CAGGTATGAAATTATAGTTT+TGG | - | chr7_4:40327465-40327484 | Msa1153510:intron | 25.0% |
| ! | ATGTATGATATGATAGAAAC+AGG | + | chr7_4:40327568-40327587 | Msa1153490:intron | 25.0% |
| !!! | GAATTGGGTTTTTTTAGTAA+TGG | - | chr7_4:40327597-40327616 | Msa1153510:intron | 25.0% |
| ! | ATGGTATCTGATGTATATTT+AGG | - | chr7_4:40327616-40327635 | Msa1153510:intron | 25.0% |
| ! | ATTTAGGAGGAAATTAATGT+TGG | - | chr7_4:40327632-40327651 | Msa1153510:intron | 25.0% |
| ! | TTTAGGAGGAAATTAATGTT+GGG | - | chr7_4:40327633-40327652 | Msa1153510:intron | 25.0% |
| !!! | TTTCATGTAGATATTGACTT+AGG | - | chr7_4:40327712-40327731 | Msa1153510:intron | 25.0% |
| !! | TTTTCTTTTGTCTGCATATA+TGG | - | chr7_4:40327759-40327778 | Msa1153510:intron | 25.0% |
| !! | TTTCTTTTGTCTGCATATAT+GGG | - | chr7_4:40327760-40327779 | Msa1153510:intron | 25.0% |
| !!! | TGAAATAATAAGGGTATCTT+AGG | + | chr7_4:40327873-40327892 | Msa1153490:intron | 25.0% |
| ! | TAAGATACCCTTATTATTTC+AGG | - | chr7_4:40327872-40327891 | Msa1153510:intron | 25.0% |
| ! | AAACTCTATAAAGTAAAGGA+CGG | - | chr7_4:40328062-40328081 | Msa1153510:intron | 25.0% |
| ! | CATATTCGATGAAAATGTAT+TGG | - | chr7_4:40328113-40328132 | Msa1153510:intron | 25.0% |
| !!! | TTTTCAGGAAAATCAAGTAT+TGG | - | chr7_4:40328662-40328681 | Msa1153510:CDS | 25.0% |
| !! | ATAAATAAATTTTGTCAGCC+GGG | - | chr7_4:40328695-40328714 | Msa1153510:five_prime_UTR | 25.0% |
| !!! | GCACTTTTAATTTTTAGTGT+CGG | + | chr7_4:40328752-40328771 | Msa1153490:intron | 25.0% |
| !! | CTAAAAATTAAAAGTGCATC+TGG | - | chr7_4:40328755-40328774 | Msa1153510:intron | 25.0% |
| ! | TGCTATGAATGATCATTATT+TGG | - | chr7_4:40329529-40329548 | Msa1153510:intron | 25.0% |
| ! | ATGAATGATCATTATTTGGT+CGG | - | chr7_4:40329533-40329552 | Msa1153510:intron | 25.0% |
| ! | TTTACCTTTCATTTATGTAC+TGG | + | chr7_4:40329562-40329581 | Msa1153490:intron | 25.0% |
| ! | ATAAATGAAAGGTAAAGTGA+TGG | - | chr7_4:40329566-40329585 | Msa1153510:intron | 25.0% |
| ! | TTTACCTTTCATTTATGTAC+TGG | + | chr7_4:40329562-40329581 | Msa1153490:intron | 25.0% |
| ! | ATAAATGAAAGGTAAAGTGA+TGG | - | chr7_4:40329566-40329585 | Msa1153510:intron | 25.0% |
| !!! | AGTTTTGGTTTTTCCAAAAA+CGG | - | chr7_4:40329714-40329733 | Msa1153510:intron | 25.0% |
| ! | GAACTAATATTAAACTGAAC+CGG | + | chr7_4:40329792-40329811 | Msa1153490:intron | 25.0% |
| ! | GGTTCAGTTTAATATTAGTT+CGG | - | chr7_4:40329791-40329810 | Msa1153510:intron | 25.0% |
| ! | AATTAGATGATGAATAGTAG+GGG | + | chr7_4:40329864-40329883 | Msa1153490:intron | 25.0% |
| ! | CAATTAGATGATGAATAGTA+GGG | + | chr7_4:40329865-40329884 | Msa1153490:intron | 25.0% |
| ! | TCAATTAGATGATGAATAGT+AGG | + | chr7_4:40329866-40329885 | Msa1153490:intron | 25.0% |
| ! | AATCATAATTCACACATCAT+TGG | + | chr7_4:40330150-40330169 | Msa1153490:intron | 25.0% |
| !!! | TTTTTGTCACCTTTTTAAGA+TGG | - | chr7_4:40330532-40330551 | Msa1153510:intron | 25.0% |
| !!! | TTTTGTCACCTTTTTAAGAT+GGG | - | chr7_4:40330533-40330552 | Msa1153510:intron | 25.0% |
| ! | TCTCATAATATTAAGACGTA+GGG | - | chr7_4:40330814-40330833 | Msa1153510:intron | 25.0% |
| ! | TAGCTTAATAGAGTTAGAAT+GGG | - | chr7_4:40330885-40330904 | Msa1153510:five_prime_UTR | 25.0% |
| ! | ATGTACAAGTAATAATCAAG+TGG | - | chr7_4:40330922-40330941 | Msa1153510:intron | 25.0% |
| !!! | GGAAATTGTCTATTGTTTTT+CGG | - | chr7_4:40330949-40330968 | Msa1153510:intron | 25.0% |
| !! | TTTTCCTGTTACCTATAAAT+GGG | + | chr7_4:40330983-40331002 | Msa1153490:intron | 25.0% |
| ! | TGCAATTCTGATTATAGTTT+AGG | + | chr7_4:40331078-40331097 | Msa1153490:intron | 25.0% |
| ! | TTGTGTATTGATGTTGGTTA+TGG | - | chr7_4:40327208-40327227 | Msa1153510:intron | 30.0% |
| !! | GTATTGTGTTTTTGTTACAG+AGG | - | chr7_4:40327372-40327391 | Msa1153510:intron | 30.0% |
| AACTGCACTGTCTTTATAAA+GGG | + | chr7_4:40327411-40327430 | Msa1153490:intron | 30.0% | |
| AAACTGCACTGTCTTTATAA+AGG | + | chr7_4:40327412-40327431 | Msa1153490:intron | 30.0% | |
| GTGCAGTTTATGTGATTATT+TGG | - | chr7_4:40327423-40327442 | Msa1153510:intron | 30.0% | |
| ! | CAAAAAAAGGTGTACATCAA+GGG | + | chr7_4:40327513-40327532 | Msa1153490:intron | 30.0% |
| ! | ACAAAAAAAGGTGTACATCA+AGG | + | chr7_4:40327514-40327533 | Msa1153490:intron | 30.0% |
| GCAGCAATATCTACAAAAAA+AGG | + | chr7_4:40327526-40327545 | Msa1153490:intron | 30.0% | |
| TCATATCATACATATGACAG+TGG | - | chr7_4:40327575-40327594 | Msa1153510:intron | 30.0% | |
| ATACATATGACAGTGGAATT+GGG | - | chr7_4:40327582-40327601 | Msa1153510:intron | 30.0% | |
| GTATCTGATGTATATTTAGG+AGG | - | chr7_4:40327619-40327638 | Msa1153510:intron | 30.0% | |
| TTAGGAGGAAATTAATGTTG+GGG | - | chr7_4:40327634-40327653 | Msa1153510:intron | 30.0% | |
| ! | TTCTTTTGTCTGCATATATG+GGG | - | chr7_4:40327761-40327780 | Msa1153510:intron | 30.0% |
| ! | ACTGTTAGTAGAGATTTTGT+CGG | - | chr7_4:40327824-40327843 | Msa1153510:intron | 30.0% |
| ! | TTTTGAATAGGATGGTGAAA+TGG | - | chr7_4:40327913-40327932 | Msa1153510:intron | 30.0% |
| AACTCTATAAAGTAAAGGAC+GGG | - | chr7_4:40328063-40328082 | Msa1153510:intron | 30.0% | |
| ATCAGAACTGCAATTGATAT+TGG | - | chr7_4:40328236-40328255 | Msa1153510:intron | 30.0% | |
| ! | ACTCTACTTTGGTGATAATT+TGG | - | chr7_4:40328487-40328506 | Msa1153510:intron | 30.0% |
| ! | TAAATAAATTTTGTCAGCCG+GGG | - | chr7_4:40328696-40328715 | Msa1153510:five_prime_UTR | 30.0% |
| GTTATGACATGTATTAGTGT+CGG | + | chr7_4:40328784-40328803 | Msa1153490:intron | 30.0% | |
| AGATTTGAGCTAAAGATAAC+TGG | - | chr7_4:40328917-40328936 | Msa1153510:five_prime_UTR | 30.0% | |
| GATTTGAGCTAAAGATAACT+GGG | - | chr7_4:40328918-40328937 | Msa1153510:five_prime_UTR | 30.0% | |
| TAGTTCTTGATTAATGAGCT+AGG | - | chr7_4:40328993-40329012 | Msa1153510:five_prime_UTR | 30.0% | |
| ! | ATTTTGTGTGACATTGAGTT+AGG | - | chr7_4:40329048-40329067 | Msa1153510:five_prime_UTR | 30.0% |
| ! | TAGTCTTGGATGATTTCAAA+AGG | + | chr7_4:40329317-40329336 | Msa1153490:intron | 30.0% |
| !!! | TGTGAGTACTCTTTTAAGTT+TGG | - | chr7_4:40329490-40329509 | Msa1153510:intron | 30.0% |
| ! | GTTATTAACTGAACCGTTTT+TGG | + | chr7_4:40329730-40329749 | Msa1153490:intron | 30.0% |
| ! | TTCAGTTTAGTTCAACAGTT+TGG | - | chr7_4:40329814-40329833 | Msa1153510:intron | 30.0% |
| AAGAAGAGATGTTAAAACGA+CGG | - | chr7_4:40330016-40330035 | Msa1153510:intron | 30.0% | |
| TTATTCAATTAGAAAGCAGC+TGG | + | chr7_4:40330384-40330403 | Msa1153490:intron | 30.0% | |
| AAAAAGGACCCATCTTAAAA+AGG | + | chr7_4:40330544-40330563 | Msa1153490:intron | 30.0% | |
| ATGATTGGAAGAAAGGAAAA+AGG | - | chr7_4:40330626-40330645 | Msa1153510:intron | 30.0% | |
| ATTGCTTTGTAGTATGTTCA+AGG | - | chr7_4:40330687-40330706 | Msa1153510:intron | 30.0% | |
| TTGCTTTGTAGTATGTTCAA+GGG | - | chr7_4:40330688-40330707 | Msa1153510:intron | 30.0% | |
| CTCTCATAATATTAAGACGT+AGG | - | chr7_4:40330813-40330832 | Msa1153510:intron | 30.0% | |
| GTAGCTTAATAGAGTTAGAA+TGG | - | chr7_4:40330884-40330903 | Msa1153510:five_prime_UTR | 30.0% | |
| AAGTAATAATCAAGTGGAAG+TGG | - | chr7_4:40330928-40330947 | Msa1153510:intron | 30.0% | |
| ! | GTTTTCCTGTTACCTATAAA+TGG | + | chr7_4:40330984-40331003 | Msa1153490:intron | 30.0% |
| CTATAATCAGAATTGCATCA+TGG | - | chr7_4:40331081-40331100 | Msa1153510:intron | 30.0% | |
| AGTTGGTTACTAAAGTATGT+TGG | - | chr7_4:40331168-40331187 | Msa1153510:intron | 30.0% | |
| ! | GACATTGATTGAGATCATAT+TGG | + | chr7_4:40331218-40331237 | Msa1153490:intron | 30.0% |
| ! | TCATCTATGTCAATGTCTTT+TGG | - | chr7_4:40331382-40331401 | Msa1153510:five_prime_UTR | 30.0% |
| ATTAACGAAAACTTACTCCT+TGG | - | chr7_4:40331470-40331489 | Msa1153510:five_prime_UTR | 30.0% | |
| !!! | ACATATTTTTCAAGCATCCA+AGG | + | chr7_4:40331490-40331509 | Msa1153490:intron | 30.0% |
| TGCTGAAAAAAGATGGAGAA+CGG | + | chr7_4:40326981-40327000 | Msa1153490:intron | 35.0% | |
| ACATGCATGCTGAAAAAAGA+TGG | + | chr7_4:40326988-40327007 | Msa1153490:intron | 35.0% | |
| !!! | TTTTTTCAGCATGCATGTCT+AGG | - | chr7_4:40326990-40327009 | Msa1153510:CDS | 35.0% |
| ! | TTCCTTTTTGATCGATTGAG+AGG | - | chr7_4:40327091-40327110 | Msa1153510:intron | 35.0% |
| ATCCTCTCAATCGATCAAAA+AGG | + | chr7_4:40327096-40327115 | Msa1153490:intron | 35.0% | |
| ! | TTTTGATCGATTGAGAGGAT+TGG | - | chr7_4:40327096-40327115 | Msa1153510:intron | 35.0% |
| TTTGATCGATTGAGAGGATT+GGG | - | chr7_4:40327097-40327116 | Msa1153510:intron | 35.0% | |
| GGTTATGGTTTCATGTGTTT+AGG | - | chr7_4:40327223-40327242 | Msa1153510:intron | 35.0% | |
| ! | ATGTGTTTAGGATGCAGATT+GGG | - | chr7_4:40327235-40327254 | Msa1153510:intron | 35.0% |
| CATACATATGACAGTGGAAT+TGG | - | chr7_4:40327581-40327600 | Msa1153510:intron | 35.0% | |
| AGGAAATTAATGTTGGGGTT+TGG | - | chr7_4:40327639-40327658 | Msa1153510:intron | 35.0% | |
| GGAAATTAATGTTGGGGTTT+GGG | - | chr7_4:40327640-40327659 | Msa1153510:intron | 35.0% | |
| !! | GTAGATATTGACTTAGGCAA+AGG | - | chr7_4:40327718-40327737 | Msa1153510:intron | 35.0% |
| ! | ATTTAAGATCCCTCGAAAGA+AGG | - | chr7_4:40327953-40327972 | Msa1153510:intron | 35.0% |
| ! | GAAAATGCTAATGGTGCTAA+TGG | - | chr7_4:40328155-40328174 | Msa1153510:intron | 35.0% |
| ! | ACTGCAATTGATATTGGTTG+TGG | - | chr7_4:40328242-40328261 | Msa1153510:intron | 35.0% |
| ! | CTGCAATTGATATTGGTTGT+GGG | - | chr7_4:40328243-40328262 | Msa1153510:intron | 35.0% |
| ! | TGCAATTGATATTGGTTGTG+GGG | - | chr7_4:40328244-40328263 | Msa1153510:intron | 35.0% |
| !! | GTTCCACTTTTACTCTACTT+TGG | - | chr7_4:40328476-40328495 | Msa1153510:intron | 35.0% |
| TCACCAAAGTAGAGTAAAAG+TGG | + | chr7_4:40328482-40328501 | Msa1153490:intron | 35.0% | |
| ATAATTGTTACGATCAACCC+CGG | + | chr7_4:40328716-40328735 | Msa1153490:intron | 35.0% | |
| AAAGAAGTTTACTCTCAGCA+AGG | + | chr7_4:40329110-40329129 | Msa1153490:intron | 35.0% | |
| TTGCTGAGAGTAAACTTCTT+TGG | - | chr7_4:40329109-40329128 | Msa1153510:five_prime_UTR | 35.0% | |
| ! | CAGTTTCACTGTACTTTTGA+AGG | + | chr7_4:40329168-40329187 | Msa1153490:intron | 35.0% |
| ! | ACTTTAAGTTCTGTTGGTTG+TGG | + | chr7_4:40329233-40329252 | Msa1153490:intron | 35.0% |
| GTCTCCAGTACATAAATGAA+AGG | - | chr7_4:40329555-40329574 | Msa1153510:intron | 35.0% | |
| GTCTCCAGTACATAAATGAA+AGG | - | chr7_4:40329555-40329574 | Msa1153510:intron | 35.0% | |
| !! | GTTTGGGTTAAGTTCAGTTT+TGG | - | chr7_4:40329699-40329718 | Msa1153510:intron | 35.0% |
| TGAATTGAACCATACCTAGA+GGG | + | chr7_4:40329756-40329775 | Msa1153490:intron | 35.0% | |
| !! | CAACAGTTTGGTTCAGTTTT+TGG | - | chr7_4:40329826-40329845 | Msa1153510:intron | 35.0% |
| AAAGTGAGTAACATGTCAAG+AGG | - | chr7_4:40330201-40330220 | Msa1153510:intron | 35.0% | |
| ATAAATTGTGTCATCACCTC+TGG | - | chr7_4:40330400-40330419 | Msa1153510:intron | 35.0% | |
| !!! | GTACTGACTTTTAAGCATCA+TGG | - | chr7_4:40330422-40330441 | Msa1153510:intron | 35.0% |
| ! | TGACTTTTAAGCATCATGGT+TGG | - | chr7_4:40330426-40330445 | Msa1153510:intron | 35.0% |
| TGTAGTCCTGTGATTCAAAA+AGG | + | chr7_4:40330560-40330579 | Msa1153490:intron | 35.0% | |
| TGATAGGATGATTGGAAGAA+AGG | - | chr7_4:40330619-40330638 | Msa1153510:intron | 35.0% | |
| ATTGGAAGAAAGGAAAAAGG+AGG | - | chr7_4:40330629-40330648 | Msa1153510:intron | 35.0% | |
| AAAGGAAAAAGGAGGCTTAT+TGG | - | chr7_4:40330637-40330656 | Msa1153510:intron | 35.0% | |
| ACTCTATTAAGCTACAACCT+TGG | + | chr7_4:40330879-40330898 | Msa1153490:intron | 35.0% | |
| !! | TCTATTGTTTTTCGGTTAGC+AGG | - | chr7_4:40330957-40330976 | Msa1153510:intron | 35.0% |
| CTAACAAAGTGCACAATGTT+TGG | - | chr7_4:40331008-40331027 | Msa1153510:intron | 35.0% | |
| !! | ACAAGAAAGCATTACATTGC+AGG | - | chr7_4:40331249-40331268 | Msa1153510:intron | 35.0% |
| ! | AAAGCATTACATTGCAGGAT+TGG | - | chr7_4:40331254-40331273 | Msa1153510:intron | 35.0% |
| TGAAACATAAAGACACAGCT+AGG | + | chr7_4:40331342-40331361 | Msa1153490:intron | 35.0% | |
| AACTCTAACATGCACAAAGA+TGG | + | chr7_4:40331417-40331436 | Msa1153490:intron | 35.0% | |
| TTGTGCATGTTAGAGTTGTT+TGG | - | chr7_4:40331420-40331439 | Msa1153510:five_prime_UTR | 35.0% | |
| GTGGAGATTAGTGTGTTCAA+CGG | + | chr7_4:40326959-40326978 | Msa1153490:intron | 40.0% | |
| TGAAAAAAGATGGAGAACGG+TGG | + | chr7_4:40326978-40326997 | Msa1153490:intron | 40.0% | |
| ! | CATGTGTTTAGGATGCAGAT+TGG | - | chr7_4:40327234-40327253 | Msa1153510:intron | 40.0% |
| TTCACTGAAAGTCCTCAAAC+TGG | + | chr7_4:40327346-40327365 | Msa1153490:intron | 40.0% | |
| TTGAGGACTTTCAGTGAACA+CGG | - | chr7_4:40327348-40327367 | Msa1153510:intron | 40.0% | |
| TGTTACAGAGGGATTTCTGA+TGG | - | chr7_4:40327384-40327403 | Msa1153510:intron | 40.0% | |
| TGTACATCAAGGGCAACAAA+AGG | + | chr7_4:40327503-40327522 | Msa1153490:intron | 40.0% | |
| ! | TGCTGCTTGCTTGAATTGTT+TGG | - | chr7_4:40327540-40327559 | Msa1153510:intron | 40.0% |
| !! | GATATTGACTTAGGCAAAGG+AGG | - | chr7_4:40327721-40327740 | Msa1153510:intron | 40.0% |
| ACATGTCCTTCACTAACAAC+AGG | + | chr7_4:40327992-40328011 | Msa1153490:intron | 40.0% | |
| TTAATGCAAGATCTGATCCC+AGG | - | chr7_4:40328197-40328216 | Msa1153510:intron | 40.0% | |
| TGACTCAAACACGTTGACAT+TGG | + | chr7_4:40328837-40328856 | Msa1153490:intron | 40.0% | |
| !! | CACTGTACTTTTGAAGGTCA+AGG | + | chr7_4:40329162-40329181 | Msa1153490:intron | 40.0% |
| !! | CCTGCTACTTTAAGTTCTGT+TGG | + | chr7_4:40329239-40329258 | Msa1153490:intron | 40.0% |
| CCAACAGAACTTAAAGTAGC+AGG | - | chr7_4:40329236-40329255 | Msa1153510:intron | 40.0% | |
| !! | AGGTAAAGTGATGGAGCTTT+TGG | - | chr7_4:40329575-40329594 | Msa1153510:intron | 40.0% |
| !! | AAGTGATGGAGCTTTTGGTT+TGG | - | chr7_4:40329682-40329701 | Msa1153510:intron | 40.0% |
| !!! | AGTGATGGAGCTTTTGGTTT+GGG | - | chr7_4:40329683-40329702 | Msa1153510:intron | 40.0% |
| GAATTGAACCATACCTAGAG+GGG | + | chr7_4:40329755-40329774 | Msa1153490:intron | 40.0% | |
| CTGAATTGAACCATACCTAG+AGG | + | chr7_4:40329757-40329776 | Msa1153490:intron | 40.0% | |
| AGATGATGAATAGTAGGGGT+GGG | + | chr7_4:40329860-40329879 | Msa1153490:intron | 40.0% | |
| TAGATGATGAATAGTAGGGG+TGG | + | chr7_4:40329861-40329880 | Msa1153490:intron | 40.0% | |
| TGCTTAAAAGTCAGTACCAG+AGG | + | chr7_4:40330419-40330438 | Msa1153490:intron | 40.0% | |
| ! | ATGGGTCCTTTTTGAATCAC+AGG | - | chr7_4:40330551-40330570 | Msa1153510:intron | 40.0% |
| TTGGTCGATGATAGGATGAT+TGG | - | chr7_4:40330611-40330630 | Msa1153510:intron | 40.0% | |
| CGATGTATCTGCTAGAAATG+AGG | - | chr7_4:40330719-40330738 | Msa1153510:intron | 40.0% | |
| AGTTAGAATGGGATAGACAC+AGG | - | chr7_4:40330896-40330915 | Msa1153510:intron | 40.0% | |
| GTAATGCTTTCTTGTGTGTC+TGG | + | chr7_4:40331244-40331263 | Msa1153490:intron | 40.0% | |
| ATAGATCGACGCCGGAAAAT+TGG | + | chr7_4:40326819-40326838 | Msa1153490:intron | 45.0% | |
| CGTTTCCTCTCTATTCTCTC+TGG | - | chr7_4:40326855-40326874 | Msa1153510:three_prime_UTR | 45.0% | |
| GTGTTCCAGAGAGAATAGAG+AGG | + | chr7_4:40326863-40326882 | Msa1153490:intron | 45.0% | |
| !! | ATGAGGTGTTGTCCAGTTTG+AGG | - | chr7_4:40327331-40327350 | Msa1153510:intron | 45.0% |
| CTAGGACCTGTTGTTAGTGA+AGG | - | chr7_4:40327983-40328002 | Msa1153510:intron | 45.0% | |
| AAAGTAAAGGACGGGTGCTT+TGG | - | chr7_4:40328071-40328090 | Msa1153510:intron | 45.0% | |
| ! | GCTAATGGTGCTAATGGTGT+TGG | - | chr7_4:40328161-40328180 | Msa1153510:intron | 45.0% |
| GATCTGATCCCAGGAATCAA+AGG | - | chr7_4:40328206-40328225 | Msa1153510:intron | 45.0% | |
| TGATCCCAGGAATCAAAGGT+GGG | - | chr7_4:40328210-40328229 | Msa1153510:intron | 45.0% | |
| TAGACCCACCTTTGATTCCT+GGG | + | chr7_4:40328217-40328236 | Msa1153490:intron | 45.0% | |
| ATAGACCCACCTTTGATTCC+TGG | + | chr7_4:40328218-40328237 | Msa1153490:intron | 45.0% | |
| ! | GTTGTGGTTGTTGGTGAATC+AGG | + | chr7_4:40329217-40329236 | Msa1153490:intron | 45.0% |
| ! | GTTCTGTTGGTTGTGGTTGT+TGG | + | chr7_4:40329226-40329245 | Msa1153490:intron | 45.0% |
| ATCAGAGATGGATCGGAGAT+GGG | - | chr7_4:40329635-40329654 | Msa1153510:intron | 45.0% | |
| CAGTTAATAACTGCCCCTCT+AGG | - | chr7_4:40329739-40329758 | Msa1153510:intron | 45.0% | |
| AATAACTGCCCCTCTAGGTA+TGG | - | chr7_4:40329744-40329763 | Msa1153510:intron | 45.0% | |
| GTAACATGTCAAGAGGCAAG+TGG | - | chr7_4:40330208-40330227 | Msa1153510:intron | 45.0% | |
| AGGCAAGTGGCACATATCTT+TGG | - | chr7_4:40330221-40330240 | Msa1153510:intron | 45.0% | |
| GTGGCACATATCTTTGGACA+TGG | - | chr7_4:40330227-40330246 | Msa1153510:intron | 45.0% | |
| ACTCCAACTTCAAGCACACT+AGG | - | chr7_4:40330580-40330599 | Msa1153510:intron | 45.0% | |
| CAGGCCCATTTATAGGTAAC+AGG | - | chr7_4:40330976-40330995 | Msa1153510:intron | 45.0% | |
| TACAGTGGGAGTGGGAAAGA+AGG | + | chr7_4:40326734-40326753 | Msa1153490:intron | 50.0% | |
| ! | TGGTGAGTTGAAGGAGGAAG+GGG | + | chr7_4:40326766-40326785 | Msa1153490:intron | 50.0% |
| ! | GTGGTGAGTTGAAGGAGGAA+GGG | + | chr7_4:40326767-40326786 | Msa1153490:intron | 50.0% |
| TGGAAAATTGGTGAAGGCGG+TGG | + | chr7_4:40326786-40326805 | Msa1153490:intron | 50.0% | |
| CGGTGGAAAATTGGTGAAGG+CGG | + | chr7_4:40326789-40326808 | Msa1153490:intron | 50.0% | |
| ! | ACCGCCGTTCACCAATTTTC+CGG | - | chr7_4:40326805-40326824 | Msa1153510:three_prime_UTR | 50.0% |
| GACGCCGGAAAATTGGTGAA+CGG | + | chr7_4:40326812-40326831 | Msa1153490:intron | 50.0% | |
| GAGAGAGAATAGATCGACGC+CGG | + | chr7_4:40326827-40326846 | Msa1153490:intron | 50.0% | |
| GTGTTCAACGGCGAGATTGA+CGG | + | chr7_4:40326947-40326966 | Msa1153490:intron | 50.0% | |
| TGAATCGCGTCCAACTGGTA+TGG | - | chr7_4:40327273-40327292 | Msa1153510:intron | 50.0% | |
| ATCCCTCGAAAGAAGGTTGC+AGG | - | chr7_4:40327960-40327979 | Msa1153510:intron | 50.0% | |
| AGCCTGCAACCTTCTTTCGA+GGG | + | chr7_4:40327965-40327984 | Msa1153490:intron | 50.0% | |
| TAGCCTGCAACCTTCTTTCG+AGG | + | chr7_4:40327966-40327985 | Msa1153490:intron | 50.0% | |
| TCGAAAGAAGGTTGCAGGCT+AGG | - | chr7_4:40327965-40327984 | Msa1153510:intron | 50.0% | |
| CTGATCCCAGGAATCAAAGG+TGG | - | chr7_4:40328209-40328228 | Msa1153510:intron | 50.0% | |
| AGCAGTGACACTTGCGTGTT+TGG | - | chr7_4:40328362-40328381 | Msa1153510:intron | 50.0% | |
| GGTGTAACATGCTGCAACTC+AGG | - | chr7_4:40328383-40328402 | Msa1153510:intron | 50.0% | |
| GGTCAAGGTTCTCTGCATCT+GGG | + | chr7_4:40329147-40329166 | Msa1153490:intron | 50.0% | |
| AGGTCAAGGTTCTCTGCATC+TGG | + | chr7_4:40329148-40329167 | Msa1153490:intron | 50.0% | |
| ATAGCAGAGACCAGATGTGC+AGG | + | chr7_4:40329262-40329281 | Msa1153490:intron | 50.0% | |
| ! | TGATGGAGCTTTTGCGAGAC+CGG | - | chr7_4:40329583-40329602 | Msa1153510:intron | 50.0% |
| TGCGGAGATCAGAGATGGAT+CGG | - | chr7_4:40329628-40329647 | Msa1153510:intron | 50.0% | |
| GATCAGAGATGGATCGGAGA+TGG | - | chr7_4:40329634-40329653 | Msa1153510:intron | 50.0% | |
| GTGCCTAGTGTGCTTGAAGT+TGG | + | chr7_4:40330586-40330605 | Msa1153490:intron | 50.0% | |
| CACTGCAGTTGGTCGATGAT+AGG | - | chr7_4:40330603-40330622 | Msa1153510:intron | 50.0% | |
| CGGTTAGCAGGCCCATTTAT+AGG | - | chr7_4:40330969-40330988 | Msa1153510:intron | 50.0% | |
| GAAACGCGTACAGTGGGAGT+GGG | + | chr7_4:40326742-40326761 | Msa1153490:intron | 55.0% | |
| AGAAACGCGTACAGTGGGAG+TGG | + | chr7_4:40326743-40326762 | Msa1153490:intron | 55.0% | |
| AGGGGAGAAACGCGTACAGT+GGG | + | chr7_4:40326748-40326767 | Msa1153490:intron | 55.0% | |
| AAGGGGAGAAACGCGTACAG+TGG | + | chr7_4:40326749-40326768 | Msa1153490:intron | 55.0% | |
| ! | GGTGGTGAGTTGAAGGAGGA+AGG | + | chr7_4:40326768-40326787 | Msa1153490:intron | 55.0% |
| ! | TGAAGGCGGTGGTGAGTTGA+AGG | + | chr7_4:40326775-40326794 | Msa1153490:intron | 55.0% |
| CGGCGGTGGAAAATTGGTGA+AGG | + | chr7_4:40326792-40326811 | Msa1153490:intron | 55.0% | |
| GGTGAACGGCGGTGGAAAAT+TGG | + | chr7_4:40326798-40326817 | Msa1153490:intron | 55.0% | |
| GGAAAATTGGTGAACGGCGG+TGG | + | chr7_4:40326806-40326825 | Msa1153490:intron | 55.0% | |
| GCCGGAAAATTGGTGAACGG+CGG | + | chr7_4:40326809-40326828 | Msa1153490:intron | 55.0% | |
| CTCTCTGAATCGCGTCCAAC+TGG | - | chr7_4:40327268-40327287 | Msa1153510:intron | 55.0% | |
| AAGTAGCAGGCCTGCACATC+TGG | - | chr7_4:40329249-40329268 | Msa1153510:intron | 55.0% | |
| ! | AGCTTTTGCGAGACCGGAGA+TGG | - | chr7_4:40329589-40329608 | Msa1153510:intron | 55.0% |
| ! | GCTTTTGCGAGACCGGAGAT+GGG | - | chr7_4:40329590-40329609 | Msa1153510:intron | 55.0% |
| ! | AGCACACTAGGCACTGCAGT+TGG | - | chr7_4:40330592-40330611 | Msa1153510:intron | 55.0% |
| ! | AGGCGGTGGTGAGTTGAAGG+AGG | + | chr7_4:40326772-40326791 | Msa1153490:intron | 60.0% |
| CGTGCTGCGGAGATCAGAGA+TGG | - | chr7_4:40329623-40329642 | Msa1153510:intron | 60.0% | |
| GGCGAGGACGGCGAGATTGA+CGG | + | chr7_4:40326926-40326945 | Msa1153490:intron | 65.0% | |
| GGCGAGATTGACGGCGAGGA+CGG | + | chr7_4:40326938-40326957 | Msa1153490:intron | 65.0% | |
| CAACGGCGAGATTGACGGCG+AGG | + | chr7_4:40326942-40326961 | Msa1153490:intron | 65.0% | |
| AGACCGGAGATGGGTCGCGA+CGG | - | chr7_4:40329599-40329618 | Msa1153510:intron | 65.0% | |
| GACGGCGAGATTGACGGCGC+TGG | + | chr7_4:40326920-40326939 | Msa1153490:intron | 70.0% | |
| CGTCCGTCGCGACCCATCTC+CGG | + | chr7_4:40329605-40329624 | Msa1153490:intron | 70.0% | |
| GGGTCGCGACGGACGTGCTG+CGG | - | chr7_4:40329610-40329629 | Msa1153510:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 40326727 | 40331572 | 40326727 | ID=Msa1153510;Name=Msa1153510 |
| chr7_4 | mRNA | 40326727 | 40331572 | 40326727 | ID=Msa1153510-mRNA-1;Parent=Msa1153510;Name=Msa1153510-mRNA-1;_AED=0.33;_eAED=0.33;_QI=846|0.75|0.88|1|0.37|0.33|9|248|64 |
| chr7_4 | exon | 40326727 | 40327091 | 40326727 | ID=Msa1153510-mRNA-1:exon:9758;Parent=Msa1153510-mRNA-1 |
| chr7_4 | exon | 40327110 | 40327116 | 40327110 | ID=Msa1153510-mRNA-1:exon:9757;Parent=Msa1153510-mRNA-1 |
| chr7_4 | exon | 40328621 | 40328736 | 40328621 | ID=Msa1153510-mRNA-1:exon:9756;Parent=Msa1153510-mRNA-1 |
| chr7_4 | exon | 40328910 | 40329204 | 40328910 | ID=Msa1153510-mRNA-1:exon:9755;Parent=Msa1153510-mRNA-1 |
| chr7_4 | exon | 40329895 | 40329935 | 40329895 | ID=Msa1153510-mRNA-1:exon:9754;Parent=Msa1153510-mRNA-1 |
| chr7_4 | exon | 40330034 | 40330092 | 40330034 | ID=Msa1153510-mRNA-1:exon:9753;Parent=Msa1153510-mRNA-1 |
| chr7_4 | exon | 40330832 | 40330907 | 40330832 | ID=Msa1153510-mRNA-1:exon:9752;Parent=Msa1153510-mRNA-1 |
| chr7_4 | exon | 40331010 | 40331054 | 40331010 | ID=Msa1153510-mRNA-1:exon:9751;Parent=Msa1153510-mRNA-1 |
| chr7_4 | exon | 40331288 | 40331572 | 40331288 | ID=Msa1153510-mRNA-1:exon:9750;Parent=Msa1153510-mRNA-1 |
| chr7_4 | five_prime_UTR | 40331288 | 40331572 | 40331288 | ID=Msa1153510-mRNA-1:five_prime_utr;Parent=Msa1153510-mRNA-1 |
| chr7_4 | five_prime_UTR | 40331010 | 40331054 | 40331010 | ID=Msa1153510-mRNA-1:five_prime_utr;Parent=Msa1153510-mRNA-1 |
| chr7_4 | five_prime_UTR | 40330832 | 40330907 | 40330832 | ID=Msa1153510-mRNA-1:five_prime_utr;Parent=Msa1153510-mRNA-1 |
| chr7_4 | five_prime_UTR | 40330034 | 40330092 | 40330034 | ID=Msa1153510-mRNA-1:five_prime_utr;Parent=Msa1153510-mRNA-1 |
| chr7_4 | five_prime_UTR | 40329895 | 40329935 | 40329895 | ID=Msa1153510-mRNA-1:five_prime_utr;Parent=Msa1153510-mRNA-1 |
| chr7_4 | five_prime_UTR | 40328910 | 40329204 | 40328910 | ID=Msa1153510-mRNA-1:five_prime_utr;Parent=Msa1153510-mRNA-1 |
| chr7_4 | five_prime_UTR | 40328692 | 40328736 | 40328692 | ID=Msa1153510-mRNA-1:five_prime_utr;Parent=Msa1153510-mRNA-1 |
| chr7_4 | CDS | 40328621 | 40328691 | 40328621 | ID=Msa1153510-mRNA-1:cds;Parent=Msa1153510-mRNA-1 |
| chr7_4 | CDS | 40327110 | 40327116 | 40327110 | ID=Msa1153510-mRNA-1:cds;Parent=Msa1153510-mRNA-1 |
| chr7_4 | CDS | 40326975 | 40327091 | 40326975 | ID=Msa1153510-mRNA-1:cds;Parent=Msa1153510-mRNA-1 |
| chr7_4 | three_prime_UTR | 40326727 | 40326974 | 40326727 | ID=Msa1153510-mRNA-1:three_prime_utr;Parent=Msa1153510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
