Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154560 | XP_003623702.1 | 93.902 | 164 | 10 | 0 | 1 | 164 | 1 | 164 | 5.95e-100 | 312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154560 | A2Q3W2 | 93.902 | 164 | 10 | 0 | 1 | 164 | 1 | 164 | 2.84e-100 | 312 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1027390 | Msa1154560 | 0.813483 | 2.501295e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154560 | MtrunA17_Chr7g0245621 | 93.902 | 164 | 10 | 0 | 1 | 164 | 1 | 164 | 5.47e-104 | 312 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154560 | AT2G38650.3 | 40.945 | 127 | 60 | 5 | 18 | 138 | 15 | 132 | 2.00e-11 | 62.4 |
| Msa1154560 | AT2G38650.2 | 40.945 | 127 | 60 | 5 | 18 | 138 | 15 | 132 | 2.84e-11 | 62.0 |
| Msa1154560 | AT2G38650.1 | 40.945 | 127 | 60 | 5 | 18 | 138 | 15 | 132 | 2.84e-11 | 62.0 |
Find 164 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTGATTTAACCGATTTAA+AGG | 0.192975 | 7_4:-42043983 | Msa1154560:three_prime_UTR |
| CCTCAGACACATCCTCTTTA+TGG | 0.206165 | 7_4:+42048375 | None:intergenic |
| GATCTGCGTTATGATAATTT+TGG | 0.219694 | 7_4:-42044451 | Msa1154560:three_prime_UTR |
| TCATCAGCAGAACTTGTCTT+AGG | 0.221662 | 7_4:+42046411 | None:intergenic |
| GTCTTACTCAAACTTATAAA+AGG | 0.233256 | 7_4:-42044506 | Msa1154560:three_prime_UTR |
| GGTCAATTGAAAGGTTATTT+AGG | 0.241667 | 7_4:-42044609 | Msa1154560:three_prime_UTR |
| AAAATTGCCCCGGTCCAATA+TGG | 0.258905 | 7_4:-42043845 | Msa1154560:three_prime_UTR |
| TTCAATTTGCTGAATATATC+AGG | 0.273389 | 7_4:+42044747 | None:intergenic |
| TGTTTAGGATTATGAACTTT+AGG | 0.280446 | 7_4:+42046458 | None:intergenic |
| GTTCCTCTCGTCTTCCTTCT+CGG | 0.292503 | 7_4:-42049714 | Msa1154560:CDS |
| TGGTTCAAGAGGAACAATTA+TGG | 0.313905 | 7_4:-42044951 | Msa1154560:three_prime_UTR |
| TCCAATATTATTTCCATTGT+TGG | 0.316834 | 7_4:-42050076 | None:intergenic |
| AAATGTATTCCGTTCTAAAC+TGG | 0.321203 | 7_4:+42044799 | None:intergenic |
| ATTGAAGAAAGTTGTTGTTC+TGG | 0.326019 | 7_4:-42044730 | Msa1154560:three_prime_UTR |
| TCAGAACATTAAGTTTATAT+AGG | 0.327590 | 7_4:+42045318 | None:intergenic |
| TAATAATAATAATTAATAAC+TGG | 0.331335 | 7_4:+42049974 | None:intergenic |
| AATTCCTGTGCTTGGATGTC+GGG | 0.331896 | 7_4:-42044567 | Msa1154560:three_prime_UTR |
| ACATCCAAGCACAGGAATTA+TGG | 0.332444 | 7_4:+42044571 | None:intergenic |
| AACATCCATCCTCTCTGATT+TGG | 0.333242 | 7_4:+42045457 | None:intergenic |
| ACAAGTTCTGCTGATGAAAC+TGG | 0.340120 | 7_4:-42046405 | Msa1154560:CDS |
| GCTGAGTGAGGAAGTTAGTT+TGG | 0.340298 | 7_4:+42050044 | None:intergenic |
| CGAGACAGTTTGTCTTGTGC+TGG | 0.341179 | 7_4:+42046243 | None:intergenic |
| TGTTCAGTGCGACCATGTTT+AGG | 0.343385 | 7_4:+42046443 | None:intergenic |
| GACGATGAAGAGCGGTGGTT+TGG | 0.349080 | 7_4:-42049829 | Msa1154560:exon |
| AATTATCATAACGCAGATCT+AGG | 0.349343 | 7_4:+42044455 | None:intergenic |
| GGTTCAAGAGGAACAATTAT+GGG | 0.352318 | 7_4:-42044950 | Msa1154560:three_prime_UTR |
| ATTTCAGGTAAGTCGGAATC+AGG | 0.354076 | 7_4:-42045021 | Msa1154560:intron |
| ATTATTATGCAATGAAGCTT+TGG | 0.355164 | 7_4:-42044971 | Msa1154560:three_prime_UTR |
| TAGAAGTTGGAGGTGATTGC+AGG | 0.365442 | 7_4:+42046897 | None:intergenic |
| TTTAGGGTAATTTGAGGTGC+TGG | 0.377897 | 7_4:+42044069 | None:intergenic |
| GGTGATTGCAGGGCAGCATT+AGG | 0.392037 | 7_4:+42046908 | None:intergenic |
| AGCGAGACTTGTCATCCCTT+TGG | 0.392190 | 7_4:-42044689 | Msa1154560:three_prime_UTR |
| CTAGTGAGGTGGAGAGAGTT+TGG | 0.394979 | 7_4:-42044528 | Msa1154560:three_prime_UTR |
| ACGATGAAGAGCGGTGGTTT+GGG | 0.395173 | 7_4:-42049828 | Msa1154560:CDS |
| TAGTAGTAGAGGAGTCAAAT+TGG | 0.398638 | 7_4:-42044195 | Msa1154560:three_prime_UTR |
| CTGAGTGAGGAAGTTAGTTT+GGG | 0.403684 | 7_4:+42050045 | None:intergenic |
| ACGGCAATTAACTACCATTC+GGG | 0.412981 | 7_4:-42044037 | Msa1154560:three_prime_UTR |
| CCATTCGGCATCCTTTAAAT+CGG | 0.418004 | 7_4:+42043972 | None:intergenic |
| AAAGGTTATTTAGGTGAGAA+AGG | 0.419292 | 7_4:-42044600 | Msa1154560:three_prime_UTR |
| TAAATTTACTAGAATTATCA+AGG | 0.419670 | 7_4:-42043787 | Msa1154560:three_prime_UTR |
| GCATTAGGTGGCGGTGGCGG+CGG | 0.424131 | 7_4:+42046923 | None:intergenic |
| GCCAGGCAGTGAAAACTCTT+TGG | 0.424554 | 7_4:+42045290 | None:intergenic |
| CGAACATCATGTCTATTGTA+TGG | 0.424864 | 7_4:+42048398 | None:intergenic |
| AACGGCAATTAACTACCATT+CGG | 0.426161 | 7_4:-42044038 | Msa1154560:three_prime_UTR |
| CCTCTCCACCGTCGTTTCGC+CGG | 0.428269 | 7_4:+42049780 | None:intergenic |
| GGTCTCATCATTGCAGTTCT+CGG | 0.431074 | 7_4:-42049759 | Msa1154560:CDS |
| GTTGAAAGACCAACTATTTG+TGG | 0.435282 | 7_4:-42046298 | Msa1154560:three_prime_UTR |
| ATTGCTGTTCAGTAGGTGAC+TGG | 0.436938 | 7_4:-42043915 | Msa1154560:three_prime_UTR |
| ATTATTGGATATAGCAGTAC+TGG | 0.443491 | 7_4:-42044420 | Msa1154560:three_prime_UTR |
| AATGAAACACGAAACTCTTC+AGG | 0.443659 | 7_4:+42044849 | None:intergenic |
| CTCTGAAGACCAGGCTATGT+GGG | 0.450075 | 7_4:+42043816 | None:intergenic |
| AATGGTAGTTAATTGCCGTT+AGG | 0.452830 | 7_4:+42044041 | None:intergenic |
| TCAACCATAATTCCTGTGCT+TGG | 0.459068 | 7_4:-42044575 | Msa1154560:three_prime_UTR |
| CATCAGCAGAACTTGTCTTA+GGG | 0.459464 | 7_4:+42046412 | None:intergenic |
| TATATTCGTACATTAGAAGT+TGG | 0.462976 | 7_4:+42046884 | None:intergenic |
| AAATTGCCCCGGTCCAATAT+GGG | 0.466152 | 7_4:-42043844 | Msa1154560:three_prime_UTR |
| TATTAGAGAAAATAACATAA+TGG | 0.480594 | 7_4:+42045183 | None:intergenic |
| AACGGTAGTTAATTGCCATT+CGG | 0.483069 | 7_4:+42043957 | None:intergenic |
| TTATAAAAGGTTGATAAAAG+AGG | 0.486751 | 7_4:-42044493 | Msa1154560:three_prime_UTR |
| CAACAGTTAGTTTCAGTGCC+AGG | 0.487654 | 7_4:+42045273 | None:intergenic |
| CTCTCCACCGTCGTTTCGCC+GGG | 0.488637 | 7_4:+42049781 | None:intergenic |
| CCCAACAAAATGAATGTACT+AGG | 0.488924 | 7_4:-42044144 | Msa1154560:three_prime_UTR |
| GCAGCATTAGGTGGCGGTGG+CGG | 0.490926 | 7_4:+42046920 | None:intergenic |
| CAAACTCTCTCCACCTCACT+AGG | 0.492527 | 7_4:+42044529 | None:intergenic |
| TATAGCTGTGGTAGTAGTAG+AGG | 0.494972 | 7_4:-42044206 | Msa1154560:three_prime_UTR |
| TAATTCCTGTGCTTGGATGT+CGG | 0.498474 | 7_4:-42044568 | Msa1154560:three_prime_UTR |
| ATGGTAGTTAATTGCCGTTA+GGG | 0.498823 | 7_4:+42044042 | None:intergenic |
| AAAACAGAGTATACAAGAGC+TGG | 0.502955 | 7_4:-42046214 | Msa1154560:three_prime_UTR |
| GGGGCCATCCCATATTGGAC+CGG | 0.503675 | 7_4:+42043836 | None:intergenic |
| CTCCCATGTCTAGGTTCCAA+AGG | 0.505256 | 7_4:+42044673 | None:intergenic |
| TGGGATGGCCCCACATAGCC+TGG | 0.508262 | 7_4:-42043825 | Msa1154560:three_prime_UTR |
| CTGTGCAATTCTGCTCAGTA+AGG | 0.509200 | 7_4:-42044635 | Msa1154560:three_prime_UTR |
| CAGAGAACCTTGGGAAGAGT+TGG | 0.510880 | 7_4:+42047951 | None:intergenic |
| AAGCTCTAGCCACAAATAGT+TGG | 0.514605 | 7_4:+42046289 | None:intergenic |
| GGGCCATCCCATATTGGACC+GGG | 0.515183 | 7_4:+42043837 | None:intergenic |
| AGTAGTAGAGGAGTCAAATT+GGG | 0.515203 | 7_4:-42044194 | Msa1154560:three_prime_UTR |
| CAGTTATGATAATCCATCCA+TGG | 0.516556 | 7_4:-42044823 | Msa1154560:three_prime_UTR |
| AAACACCGTTCGCTGCAAAA+CGG | 0.517951 | 7_4:+42043939 | None:intergenic |
| GAAGAGCGGTGGTTTGGGCG+CGG | 0.519255 | 7_4:-42049823 | Msa1154560:CDS |
| GGCGCGGTTCAATCATCGTA+CGG | 0.521842 | 7_4:-42049807 | Msa1154560:CDS |
| GTTCTAAACTGGCCCATGGA+TGG | 0.523266 | 7_4:+42044810 | None:intergenic |
| GTTCTGAAGAATTATTCTAA+AGG | 0.524642 | 7_4:-42047092 | Msa1154560:CDS |
| TCCCATGTCTAGGTTCCAAA+GGG | 0.527041 | 7_4:+42044674 | None:intergenic |
| ATCATCACATTATGAAGAAG+AGG | 0.530449 | 7_4:-42045240 | Msa1154560:three_prime_UTR |
| GAGCAATTGCTACGTGCCTA+AGG | 0.530701 | 7_4:+42044093 | None:intergenic |
| TCAACATTGTCGCAAACCAC+GGG | 0.530704 | 7_4:+42045410 | None:intergenic |
| TCAATCATCGTACGGCGTCC+CGG | 0.531968 | 7_4:-42049799 | Msa1154560:CDS |
| TGCAGGGCAGCATTAGGTGG+CGG | 0.532715 | 7_4:+42046914 | None:intergenic |
| GTGTTTAATTGCTGTTCAGT+AGG | 0.536203 | 7_4:-42043922 | Msa1154560:three_prime_UTR |
| GAAGACGAGAGGAACGAGCA+TGG | 0.536352 | 7_4:+42049722 | None:intergenic |
| GTCTTTCAACTTCTTAACCA+TGG | 0.538036 | 7_4:+42046311 | None:intergenic |
| AGGGCAGCATTAGGTGGCGG+TGG | 0.539778 | 7_4:+42046917 | None:intergenic |
| GGGGTATTTAGGGTAATTTG+AGG | 0.539879 | 7_4:+42044063 | None:intergenic |
| CAATGAAGCTTTGGTTCAAG+AGG | 0.541078 | 7_4:-42044962 | Msa1154560:three_prime_UTR |
| TCTCTGAAGACCAGGCTATG+TGG | 0.543325 | 7_4:+42043815 | None:intergenic |
| TGAGACCAAATCAGAGAGGA+TGG | 0.545417 | 7_4:-42045462 | Msa1154560:three_prime_UTR |
| AAGTCGTGCGAGCTCACATA+CGG | 0.545885 | 7_4:-42046381 | Msa1154560:CDS |
| TTGGGCTGAGCTCAATGCAT+TGG | 0.548540 | 7_4:-42044176 | Msa1154560:three_prime_UTR |
| GTTTGAACCAACTCTTCCCA+AGG | 0.550559 | 7_4:-42047958 | Msa1154560:intron |
| ACATGATGTTCGCCATAAAG+AGG | 0.551438 | 7_4:-42048387 | Msa1154560:CDS |
| TATGTGGGGCCATCCCATAT+TGG | 0.553860 | 7_4:+42043831 | None:intergenic |
| GATTGCAGGGCAGCATTAGG+TGG | 0.556142 | 7_4:+42046911 | None:intergenic |
| CAATTCTGCTCAGTAAGGCT+AGG | 0.558632 | 7_4:-42044630 | Msa1154560:three_prime_UTR |
| TATTCTAAAGGAGACAAGAA+TGG | 0.560838 | 7_4:-42047080 | Msa1154560:CDS |
| ATTCGTACATTAGAAGTTGG+AGG | 0.563574 | 7_4:+42046887 | None:intergenic |
| TTAACTATTCTCTGAAGACC+AGG | 0.565003 | 7_4:+42043807 | None:intergenic |
| GAGACAGTTTGTCTTGTGCT+GGG | 0.565251 | 7_4:+42046244 | None:intergenic |
| ATTATCATAACGCAGATCTA+GGG | 0.565630 | 7_4:+42044456 | None:intergenic |
| TTCCGTTCTAAACTGGCCCA+TGG | 0.569222 | 7_4:+42044806 | None:intergenic |
| GCTCAATATTTCAGGTAAGT+CGG | 0.574027 | 7_4:-42045028 | Msa1154560:intron |
| ATCAACATTGTCGCAAACCA+CGG | 0.574686 | 7_4:+42045409 | None:intergenic |
| GGTGCCTGTGAGCAATTGCT+AGG | 0.575074 | 7_4:-42043893 | Msa1154560:three_prime_UTR |
| ACGGCGTCCCGGCGAAACGA+CGG | 0.577353 | 7_4:-42049788 | Msa1154560:CDS |
| TTGGGTTGATCTGCCAACAA+TGG | 0.581556 | 7_4:+42050063 | None:intergenic |
| CCGATTTAAAGGATGCCGAA+TGG | 0.586954 | 7_4:-42043972 | Msa1154560:three_prime_UTR |
| CACACCTAGCAATTGCTCAC+AGG | 0.589409 | 7_4:+42043889 | None:intergenic |
| TTGCTGTTCAGTAGGTGACT+GGG | 0.593460 | 7_4:-42043914 | Msa1154560:three_prime_UTR |
| TAATGTGCTTGCAGCATCAG+TGG | 0.593536 | 7_4:-42045162 | Msa1154560:three_prime_UTR |
| ATCCCTTTGGAACCTAGACA+TGG | 0.597008 | 7_4:-42044676 | Msa1154560:three_prime_UTR |
| ATCCATGGGCCAGTTTAGAA+CGG | 0.597269 | 7_4:-42044808 | Msa1154560:three_prime_UTR |
| CCGGCGAAACGACGGTGGAG+AGG | 0.597288 | 7_4:-42049780 | Msa1154560:CDS |
| AGTTATGATAATCCATCCAT+GGG | 0.597691 | 7_4:-42044822 | Msa1154560:three_prime_UTR |
| TGAACAGAGAAATACTCCTC+CGG | 0.598968 | 7_4:-42048557 | Msa1154560:intron |
| AGGATGAAGCTGATTTCCAC+AGG | 0.600434 | 7_4:-42045355 | Msa1154560:three_prime_UTR |
| AGATAAATCAAGTCATGTGA+AGG | 0.603002 | 7_4:-42047994 | Msa1154560:CDS |
| ATTATATCAGCTTACAGTGG+TGG | 0.603346 | 7_4:+42046153 | None:intergenic |
| AATCAATCAACCGCTGAGTG+AGG | 0.604146 | 7_4:+42050032 | None:intergenic |
| CAACCCCGACATCCAAGCAC+AGG | 0.604325 | 7_4:+42044563 | None:intergenic |
| TATATTGTTAAATATAGCTG+TGG | 0.610171 | 7_4:-42044218 | Msa1154560:intron |
| GTTCAAGAGGAACAATTATG+GGG | 0.611068 | 7_4:-42044949 | Msa1154560:three_prime_UTR |
| AGAAGTTGGAGGTGATTGCA+GGG | 0.611391 | 7_4:+42046898 | None:intergenic |
| TGAACATAATTGACCTAGTG+AGG | 0.613070 | 7_4:-42044542 | Msa1154560:three_prime_UTR |
| AGGTTGATAAAAGAGGTTAG+TGG | 0.618261 | 7_4:-42044486 | Msa1154560:three_prime_UTR |
| AACACGAAACTCTTCAGGCA+AGG | 0.619209 | 7_4:+42044854 | None:intergenic |
| AGAAGTTATGAAAGACGCCA+TGG | 0.620598 | 7_4:-42046328 | Msa1154560:exon |
| TGCCCCGGTCCAATATGGGA+TGG | 0.621817 | 7_4:-42043840 | Msa1154560:three_prime_UTR |
| GGTAGTTAATTGCCGTTAGG+GGG | 0.621837 | 7_4:+42044044 | None:intergenic |
| GTAAGGCTAGGTCAATTGAA+AGG | 0.623160 | 7_4:-42044618 | Msa1154560:three_prime_UTR |
| CCATAAAGAGGATGTGTCTG+AGG | 0.623419 | 7_4:-42048375 | Msa1154560:intron |
| TGGTAGTTAATTGCCGTTAG+GGG | 0.624621 | 7_4:+42044043 | None:intergenic |
| AAATTTACTAGAATTATCAA+GGG | 0.625338 | 7_4:-42043786 | Msa1154560:three_prime_UTR |
| ATTCCTGTGCTTGGATGTCG+GGG | 0.629527 | 7_4:-42044566 | Msa1154560:three_prime_UTR |
| GGAATGCACTCTGTTTCCTG+TGG | 0.630332 | 7_4:+42045339 | None:intergenic |
| AAATGTTGAGCATCTTGAGA+TGG | 0.630523 | 7_4:-42044907 | Msa1154560:three_prime_UTR |
| GCGTCCCGGCGAAACGACGG+TGG | 0.638563 | 7_4:-42049785 | Msa1154560:CDS |
| CAGCAGAACTTGTCTTAGGG+TGG | 0.643664 | 7_4:+42046415 | None:intergenic |
| CAATTAACTACCATTCGGGG+AGG | 0.645683 | 7_4:-42044033 | Msa1154560:three_prime_UTR |
| AACTGTTGTGGAGACCGAGA+AGG | 0.646476 | 7_4:+42049700 | None:intergenic |
| AAAGTTCATAATCCTAAACA+TGG | 0.649384 | 7_4:-42046455 | Msa1154560:CDS |
| CAGAAGTGTGAAAACTGTTG+TGG | 0.649636 | 7_4:+42049688 | None:intergenic |
| AGACCGAGAAGGAAGACGAG+AGG | 0.652406 | 7_4:+42049711 | None:intergenic |
| ACATAATTGACCTAGTGAGG+TGG | 0.653949 | 7_4:-42044539 | Msa1154560:three_prime_UTR |
| TCTGAAGACCAGGCTATGTG+GGG | 0.664423 | 7_4:+42043817 | None:intergenic |
| CATACGGTAGTTACTGTCTG+TGG | 0.666063 | 7_4:-42046365 | Msa1154560:CDS |
| AAAGCGACGATGAAGAGCGG+TGG | 0.672388 | 7_4:-42049834 | Msa1154560:exon |
| TCCCTTTGGAACCTAGACAT+GGG | 0.674373 | 7_4:-42044675 | Msa1154560:three_prime_UTR |
| AAGAAAGCGACGATGAAGAG+CGG | 0.681471 | 7_4:-42049837 | Msa1154560:exon |
| GGCCATCCCATATTGGACCG+GGG | 0.682435 | 7_4:+42043838 | None:intergenic |
| CGGCAATTAACTACCATTCG+GGG | 0.689276 | 7_4:-42044036 | Msa1154560:three_prime_UTR |
| ACAATTATATGATCTGACTG+AGG | 0.702585 | 7_4:-42045375 | Msa1154560:three_prime_UTR |
| CAGAGCTAAATCAGTCCCCG+TGG | 0.710189 | 7_4:-42045426 | Msa1154560:three_prime_UTR |
| CAACATTGTCGCAAACCACG+GGG | 0.719161 | 7_4:+42045411 | None:intergenic |
| AAACTAACTTCCTCACTCAG+CGG | 0.730121 | 7_4:-42050042 | Msa1154560:five_prime_UTR |
| GGGTTGAGACCAAATCAGAG+AGG | 0.752411 | 7_4:-42045466 | Msa1154560:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGTATTTATGTATTTTTT+TGG | - | chr7_4:42044614-42044633 | Msa1154560:three_prime_UTR | 10.0% |
| !! | AAAAAATAAGACATTATTTA+AGG | + | chr7_4:42045645-42045664 | None:intergenic | 10.0% |
| !! | AACAAAAATATCTTAAAATT+TGG | - | chr7_4:42045986-42046005 | Msa1154560:intron | 10.0% |
| !! | ACAAAAATATCTTAAAATTT+GGG | - | chr7_4:42045987-42046006 | Msa1154560:intron | 10.0% |
| !!! | AAAATTTAAAACAGAAAAAA+AGG | + | chr7_4:42046711-42046730 | None:intergenic | 10.0% |
| !! | ATATTTAACAATATAATCAA+CGG | + | chr7_4:42049455-42049474 | None:intergenic | 10.0% |
| !!! | GTTTTTATTTTTTGTTTGAT+TGG | + | chr7_4:42043739-42043758 | None:intergenic | 15.0% |
| !! | AAAAAAAACTCAATTAACAT+TGG | + | chr7_4:42044127-42044146 | None:intergenic | 15.0% |
| !!! | TTCTCTTTTTAATTTAATTC+AGG | - | chr7_4:42044235-42044254 | Msa1154560:intron | 15.0% |
| !!! | AGATTTTTTTATTTTTTTGG+TGG | - | chr7_4:42046915-42046934 | Msa1154560:CDS | 15.0% |
| !!! | GATTTTTTTATTTTTTTGGT+GGG | - | chr7_4:42046916-42046935 | Msa1154560:CDS | 15.0% |
| !! | AAACTAATTAAACTACATTA+AGG | + | chr7_4:42047762-42047781 | None:intergenic | 15.0% |
| !!! | TATTTAACTTCTATTTACTT+GGG | - | chr7_4:42047838-42047857 | Msa1154560:intron | 15.0% |
| !!! | TATTATTTTAGAACCATTTA+TGG | - | chr7_4:42047863-42047882 | Msa1154560:intron | 15.0% |
| !! | AGTTTACAAAAAAATTTACA+AGG | - | chr7_4:42048170-42048189 | Msa1154560:intron | 15.0% |
| !! | TATTAGAGAAAATAACATAA+TGG | + | chr7_4:42048498-42048517 | None:intergenic | 15.0% |
| !! | AAGTGAAATTATTAAAATAG+TGG | + | chr7_4:42048624-42048643 | None:intergenic | 15.0% |
| !!! | ATTTTGGAAAATACTATTAT+TGG | - | chr7_4:42049243-42049262 | Msa1154560:intron | 15.0% |
| !! | TATTTAACAATATAATCAAC+GGG | + | chr7_4:42049454-42049473 | None:intergenic | 15.0% |
| !! | TAAATTTACTAGAATTATCA+AGG | - | chr7_4:42049891-42049910 | Msa1154560:five_prime_UTR | 15.0% |
| !! | AAATTTACTAGAATTATCAA+GGG | - | chr7_4:42049892-42049911 | Msa1154560:five_prime_UTR | 15.0% |
| !!! | TTATGTTTTCGTAATTAAAA+AGG | - | chr7_4:42049934-42049953 | Msa1154560:five_prime_UTR | 15.0% |
| !! | CGCTAAAATGAAAATTTATA+TGG | + | chr7_4:42044097-42044116 | None:intergenic | 20.0% |
| !!! | TCTGCTAACTTTATTTATTT+AGG | - | chr7_4:42044905-42044924 | Msa1154560:three_prime_UTR | 20.0% |
| !! | TATTCTTAAAGCATAGAAAA+TGG | - | chr7_4:42045516-42045535 | Msa1154560:intron | 20.0% |
| !! | ATTCTTAAAGCATAGAAAAT+GGG | - | chr7_4:42045517-42045536 | Msa1154560:intron | 20.0% |
| !!! | AAACAATTAATCCTTTTACT+AGG | - | chr7_4:42045541-42045560 | Msa1154560:intron | 20.0% |
| !!! | TTGTAAATTGCATAGTTTTT+TGG | - | chr7_4:42045953-42045972 | Msa1154560:intron | 20.0% |
| !!! | TTACTTTGAAATACTTTCTA+CGG | + | chr7_4:42046339-42046358 | None:intergenic | 20.0% |
| !!! | AATTTGTAAGATTTAAAACC+TGG | + | chr7_4:42046453-42046472 | None:intergenic | 20.0% |
| !! | ATATATACCATTAATCTTAG+AGG | - | chr7_4:42046890-42046909 | Msa1154560:intron | 20.0% |
| !! | TATATACCATTAATCTTAGA+GGG | - | chr7_4:42046891-42046910 | Msa1154560:intron | 20.0% |
| !!! | GGCAGATTTTTTTATTTTTT+TGG | - | chr7_4:42046912-42046931 | Msa1154560:CDS | 20.0% |
| !! | GAATAAGTACTAACATAAAA+AGG | - | chr7_4:42047000-42047019 | Msa1154560:intron | 20.0% |
| !! | GAAGCTAATAAAAATAATAC+AGG | + | chr7_4:42047808-42047827 | None:intergenic | 20.0% |
| !!! | GTATTTAACTTCTATTTACT+TGG | - | chr7_4:42047837-42047856 | Msa1154560:intron | 20.0% |
| !! | GATGTAATAAAAACATTCAT+GGG | + | chr7_4:42048101-42048120 | None:intergenic | 20.0% |
| !! | AGATGTAATAAAAACATTCA+TGG | + | chr7_4:42048102-42048121 | None:intergenic | 20.0% |
| !! | GTATTCAAAATCACTTTATA+GGG | - | chr7_4:42048192-42048211 | Msa1154560:intron | 20.0% |
| !! | TCAGAACATTAAGTTTATAT+AGG | + | chr7_4:42048363-42048382 | None:intergenic | 20.0% |
| !!! | ATCTTCAAATTTTTCTGAAT+CGG | + | chr7_4:42048464-42048483 | None:intergenic | 20.0% |
| !!! | TTATAAAAGGTTGATAAAAG+AGG | - | chr7_4:42049185-42049204 | Msa1154560:intron | 20.0% |
| !! | TATATTGTTAAATATAGCTG+TGG | - | chr7_4:42049460-42049479 | Msa1154560:intron | 20.0% |
| !!! | GGTTAAATCACTTTTTAAAT+CGG | + | chr7_4:42049688-42049707 | None:intergenic | 20.0% |
| ! | ATGTGATGAAAATGAAGAAT+TGG | + | chr7_4:42044056-42044075 | None:intergenic | 25.0% |
| ! | TTTGTACGTTTGTTCAATTA+TGG | - | chr7_4:42044273-42044292 | Msa1154560:intron | 25.0% |
| !!! | ATTTTTTTGGTGTTAACCTT+TGG | - | chr7_4:42044627-42044646 | Msa1154560:three_prime_UTR | 25.0% |
| !!! | TTTTTTTGGTGTTAACCTTT+GGG | - | chr7_4:42044628-42044647 | Msa1154560:three_prime_UTR | 25.0% |
| !!! | AAAAGTACTATTTGTAACGA+TGG | - | chr7_4:42044928-42044947 | Msa1154560:three_prime_UTR | 25.0% |
| ! | TGCATAAACATAACAACAAA+TGG | + | chr7_4:42045090-42045109 | None:intergenic | 25.0% |
| !!! | ATTTGTTGTTATGTTTATGC+AGG | - | chr7_4:42045089-42045108 | Msa1154560:intron | 25.0% |
| !!! | ATAACATTTTGACTCTGATT+TGG | + | chr7_4:42045259-42045278 | None:intergenic | 25.0% |
| !! | AGGCTTATTTAAAATAGCTT+GGG | + | chr7_4:42045343-42045362 | None:intergenic | 25.0% |
| !! | AAGGCTTATTTAAAATAGCT+TGG | + | chr7_4:42045344-42045363 | None:intergenic | 25.0% |
| ! | TATACTGATAACCTAGTAAA+AGG | + | chr7_4:42045555-42045574 | None:intergenic | 25.0% |
| ! | TAAAGTTCAAACAAAACACA+TGG | - | chr7_4:42045573-42045592 | Msa1154560:intron | 25.0% |
| ! | GTGTATGAAACATTCAAAAA+CGG | - | chr7_4:42045599-42045618 | Msa1154560:intron | 25.0% |
| !! | TAAGACATTATTTAAGGCTT+TGG | + | chr7_4:42045639-42045658 | None:intergenic | 25.0% |
| !! | TTTTTGTAAATTTCTTCCAC+AGG | - | chr7_4:42045660-42045679 | Msa1154560:intron | 25.0% |
| !! | TTTTGTAAATTTCTTCCACA+GGG | - | chr7_4:42045661-42045680 | Msa1154560:intron | 25.0% |
| !! | AACTTTGAGAATTGACATTT+GGG | + | chr7_4:42046117-42046136 | None:intergenic | 25.0% |
| !! | AAACTTTGAGAATTGACATT+TGG | + | chr7_4:42046118-42046137 | None:intergenic | 25.0% |
| !!! | AATATCTGTCTCTTTGTTTT+TGG | - | chr7_4:42046294-42046313 | Msa1154560:three_prime_UTR | 25.0% |
| !!! | TACTTTGAAATACTTTCTAC+GGG | + | chr7_4:42046338-42046357 | None:intergenic | 25.0% |
| !! | TTGAGGATTTTCATCAATAA+TGG | + | chr7_4:42046369-42046388 | None:intergenic | 25.0% |
| !! | CCAATTTTTGCAATATAAAG+AGG | + | chr7_4:42046416-42046435 | None:intergenic | 25.0% |
| ! | CCTCTTTATATTGCAAAAAT+TGG | - | chr7_4:42046413-42046432 | Msa1154560:CDS | 25.0% |
| !! | CAATAATAATTTTGCATGTC+AGG | - | chr7_4:42046561-42046580 | Msa1154560:intron | 25.0% |
| !!! | GTTCTGAAGAATTATTCTAA+AGG | - | chr7_4:42046586-42046605 | Msa1154560:intron | 25.0% |
| !!! | TGATTTTCAAGAAGGTATTA+GGG | + | chr7_4:42046685-42046704 | None:intergenic | 25.0% |
| !!! | ATGATTTTCAAGAAGGTATT+AGG | + | chr7_4:42046686-42046705 | None:intergenic | 25.0% |
| !!! | AAAGGAAATGATTTTCAAGA+AGG | + | chr7_4:42046693-42046712 | None:intergenic | 25.0% |
| !!! | TAATTAATTTTCAGGTGTCA+AGG | - | chr7_4:42046730-42046749 | Msa1154560:intron | 25.0% |
| ! | TATATTCGTACATTAGAAGT+TGG | + | chr7_4:42046797-42046816 | None:intergenic | 25.0% |
| ! | AGCAATTATGTGTTCAATAA+AGG | + | chr7_4:42046827-42046846 | None:intergenic | 25.0% |
| ! | AATGTTATAGGAGATTATAC+TGG | + | chr7_4:42046973-42046992 | None:intergenic | 25.0% |
| !! | TGTTTAGGATTATGAACTTT+AGG | + | chr7_4:42047223-42047242 | None:intergenic | 25.0% |
| ! | AAAGTTCATAATCCTAAACA+TGG | - | chr7_4:42047223-42047242 | Msa1154560:intron | 25.0% |
| ! | GGTATTCAAAATCACTTTAT+AGG | - | chr7_4:42048191-42048210 | Msa1154560:intron | 25.0% |
| ! | ATTATTATGCAATGAAGCTT+TGG | - | chr7_4:42048707-42048726 | Msa1154560:intron | 25.0% |
| !! | GTTGTAATGAATTGTCTTTT+AGG | + | chr7_4:42048801-42048820 | None:intergenic | 25.0% |
| !!! | TTCAATTTGCTGAATATATC+AGG | + | chr7_4:42048934-42048953 | None:intergenic | 25.0% |
| ! | GTCTTACTCAAACTTATAAA+AGG | - | chr7_4:42049172-42049191 | Msa1154560:intron | 25.0% |
| ! | TACTGGAAGTAATATTGTTA+AGG | - | chr7_4:42049275-42049294 | Msa1154560:intron | 25.0% |
| ! | ACTGGAAGTAATATTGTTAA+GGG | - | chr7_4:42049276-42049295 | Msa1154560:intron | 25.0% |
| !! | AAAACTGAAATTTTCTCCTT+AGG | - | chr7_4:42049569-42049588 | Msa1154560:intron | 25.0% |
| !! | AAGTGATTTAACCGATTTAA+AGG | - | chr7_4:42049695-42049714 | Msa1154560:CDS | 25.0% |
| TCGACAACAATAGTGATTTA+AGG | - | chr7_4:42044473-42044492 | Msa1154560:three_prime_UTR | 30.0% | |
| TTGAATGTAATCACATGTGT+CGG | - | chr7_4:42044506-42044525 | Msa1154560:three_prime_UTR | 30.0% | |
| AAAGAAATTCAACTCAGAGA+TGG | + | chr7_4:42044869-42044888 | None:intergenic | 30.0% | |
| CATTTGAATTGAATGCTTAC+CGG | + | chr7_4:42045143-42045162 | None:intergenic | 30.0% | |
| ! | ATTATTTAAGGCTTTGGTAG+GGG | + | chr7_4:42045633-42045652 | None:intergenic | 30.0% |
| ! | CATTATTTAAGGCTTTGGTA+GGG | + | chr7_4:42045634-42045653 | None:intergenic | 30.0% |
| ! | ACATTATTTAAGGCTTTGGT+AGG | + | chr7_4:42045635-42045654 | None:intergenic | 30.0% |
| AGATAAATCAAGTCATGTGA+AGG | - | chr7_4:42045684-42045703 | Msa1154560:intron | 30.0% | |
| CTGTAATTGTCATCATTGTA+AGG | - | chr7_4:42045895-42045914 | Msa1154560:intron | 30.0% | |
| ! | TGTCATCATTGTAAGGTTTT+TGG | - | chr7_4:42045902-42045921 | Msa1154560:intron | 30.0% |
| ! | GTCATCATTGTAAGGTTTTT+GGG | - | chr7_4:42045903-42045922 | Msa1154560:intron | 30.0% |
| ACTATGCAATTTACAAAGCT+GGG | + | chr7_4:42045949-42045968 | None:intergenic | 30.0% | |
| AACTATGCAATTTACAAAGC+TGG | + | chr7_4:42045950-42045969 | None:intergenic | 30.0% | |
| TTGGGCAAAATAAAGATAAC+CGG | - | chr7_4:42046005-42046024 | Msa1154560:intron | 30.0% | |
| ! | GTTTCTTTCTTTTTCTGTTC+TGG | + | chr7_4:42046044-42046063 | None:intergenic | 30.0% |
| AAAGAAACATAAGAGAACAG+TGG | - | chr7_4:42046056-42046075 | Msa1154560:intron | 30.0% | |
| ! | TTCTCAAAGTTTGTTCGAAA+CGG | - | chr7_4:42046126-42046145 | Msa1154560:intron | 30.0% |
| ! | TATTCTAAAGGAGACAAGAA+TGG | - | chr7_4:42046598-42046617 | Msa1154560:intron | 30.0% |
| ACCAATGAAGAAAAACATAG+AGG | - | chr7_4:42046631-42046650 | Msa1154560:intron | 30.0% | |
| ! | ACCTCTATGTTTTTCTTCAT+TGG | + | chr7_4:42046635-42046654 | None:intergenic | 30.0% |
| TGGTGGGATAATAATTTAGT+AGG | - | chr7_4:42046932-42046951 | Msa1154560:CDS | 30.0% | |
| TATTCTGCTGTGAATGTTAT+AGG | + | chr7_4:42046985-42047004 | None:intergenic | 30.0% | |
| GCTCCATTCAAATAGTTAAT+CGG | - | chr7_4:42047033-42047052 | Msa1154560:intron | 30.0% | |
| CTCCATTCAAATAGTTAATC+GGG | - | chr7_4:42047034-42047053 | Msa1154560:intron | 30.0% | |
| !! | AAATAACCTTTAAAGTCTGC+TGG | + | chr7_4:42047146-42047165 | None:intergenic | 30.0% |
| !!! | CTTGTATACTCTGTTTTAGT+TGG | + | chr7_4:42047461-42047480 | None:intergenic | 30.0% |
| CAAATTATATCAGCTTACAG+TGG | + | chr7_4:42047531-42047550 | None:intergenic | 30.0% | |
| CTTTCTACTTGAGAAGTTAT+TGG | - | chr7_4:42047587-42047606 | Msa1154560:intron | 30.0% | |
| ATTGTGTATGGAACCATAAA+TGG | + | chr7_4:42047879-42047898 | None:intergenic | 30.0% | |
| !!! | TGGTTCCATACACAATTTTT+TGG | - | chr7_4:42047883-42047902 | Msa1154560:intron | 30.0% |
| !!! | GGTTCCATACACAATTTTTT+GGG | - | chr7_4:42047884-42047903 | Msa1154560:intron | 30.0% |
| TTAGCCCAAAAAATTGTGTA+TGG | + | chr7_4:42047891-42047910 | None:intergenic | 30.0% | |
| !!! | ACACAATTTTTTGGGCTAAT+AGG | - | chr7_4:42047892-42047911 | Msa1154560:intron | 30.0% |
| AAAGTTGAGATGAGAAAGAA+AGG | + | chr7_4:42047941-42047960 | None:intergenic | 30.0% | |
| ATCTCAACTTTGTTCTATCT+CGG | - | chr7_4:42047950-42047969 | Msa1154560:intron | 30.0% | |
| ! | TTTGAGGTTAATCAACAGAA+AGG | + | chr7_4:42047988-42048007 | None:intergenic | 30.0% |
| ACAATTATATGATCTGACTG+AGG | - | chr7_4:42048303-42048322 | Msa1154560:intron | 30.0% | |
| ATCATCACATTATGAAGAAG+AGG | - | chr7_4:42048438-42048457 | Msa1154560:intron | 30.0% | |
| AGTTATGATAATCCATCCAT+GGG | - | chr7_4:42048856-42048875 | Msa1154560:intron | 30.0% | |
| ! | AAATGTATTCCGTTCTAAAC+TGG | + | chr7_4:42048882-42048901 | None:intergenic | 30.0% |
| ! | ATTGAAGAAAGTTGTTGTTC+TGG | - | chr7_4:42048948-42048967 | Msa1154560:intron | 30.0% |
| GGTCAATTGAAAGGTTATTT+AGG | - | chr7_4:42049069-42049088 | Msa1154560:intron | 30.0% | |
| AAAGGTTATTTAGGTGAGAA+AGG | - | chr7_4:42049078-42049097 | Msa1154560:intron | 30.0% | |
| ATTATCATAACGCAGATCTA+GGG | + | chr7_4:42049225-42049244 | None:intergenic | 30.0% | |
| AATTATCATAACGCAGATCT+AGG | + | chr7_4:42049226-42049245 | None:intergenic | 30.0% | |
| ! | GATCTGCGTTATGATAATTT+TGG | - | chr7_4:42049227-42049246 | Msa1154560:intron | 30.0% |
| ATTATTGGATATAGCAGTAC+TGG | - | chr7_4:42049258-42049277 | Msa1154560:intron | 30.0% | |
| TTGTTAAGGGAAATGTTAAC+CGG | - | chr7_4:42049289-42049308 | Msa1154560:intron | 30.0% | |
| ! | CCTAGTACATTCATTTTGTT+GGG | + | chr7_4:42049537-42049556 | None:intergenic | 30.0% |
| !! | TTTTAAGAGGATTGCTCTTT+AGG | + | chr7_4:42049815-42049834 | None:intergenic | 30.0% |
| ! | TGCATCACTTTGAAGAAAAA+AGG | - | chr7_4:42050047-42050066 | Msa1154560:five_prime_UTR | 30.0% |
| ! | ATCACTTTGAAGAAAAAAGG+TGG | - | chr7_4:42050050-42050069 | Msa1154560:five_prime_UTR | 30.0% |
| !! | TAGAAGCATTGACACGTATA+CGG | - | chr7_4:42044427-42044446 | Msa1154560:three_prime_UTR | 35.0% |
| ! | GTTTTGTAGCATGAACACTT+CGG | + | chr7_4:42044575-42044594 | None:intergenic | 35.0% |
| ATTCATAGGTGGAACATTCT+TGG | + | chr7_4:42044710-42044729 | None:intergenic | 35.0% | |
| AGAACTTGAGTTCGATTCAT+AGG | + | chr7_4:42044724-42044743 | None:intergenic | 35.0% | |
| ! | AATTTTGCACGAAACTTGCA+TGG | - | chr7_4:42044951-42044970 | Msa1154560:three_prime_UTR | 35.0% |
| AAATGACACAAGAGAAAGTG+AGG | + | chr7_4:42045235-42045254 | None:intergenic | 35.0% | |
| CGAACATCATGTCTATTGTA+TGG | + | chr7_4:42045283-42045302 | None:intergenic | 35.0% | |
| AGAATGCTAGAAGAAAAGGA+AGG | + | chr7_4:42045363-42045382 | None:intergenic | 35.0% | |
| CAGAAGAATGCTAGAAGAAA+AGG | + | chr7_4:42045367-42045386 | None:intergenic | 35.0% | |
| TTTCTTCTAGCATTCTTCTG+CGG | - | chr7_4:42045367-42045386 | Msa1154560:three_prime_UTR | 35.0% | |
| TGACTACAACTAAAACAGTG+AGG | + | chr7_4:42045411-42045430 | None:intergenic | 35.0% | |
| TTAGCATGCACAAACATTGA+TGG | - | chr7_4:42045492-42045511 | Msa1154560:intron | 35.0% | |
| TAGCATGCACAAACATTGAT+GGG | - | chr7_4:42045493-42045512 | Msa1154560:intron | 35.0% | |
| GTTCAAACAAAACACATGGT+TGG | - | chr7_4:42045577-42045596 | Msa1154560:intron | 35.0% | |
| AGTATTATGCAGAGAACCTT+GGG | + | chr7_4:42045739-42045758 | None:intergenic | 35.0% | |
| TTCTTGCCTAACATAATCGA+AGG | - | chr7_4:42045848-42045867 | Msa1154560:intron | 35.0% | |
| TCTTGCCTAACATAATCGAA+GGG | - | chr7_4:42045849-42045868 | Msa1154560:intron | 35.0% | |
| ! | GTTTTCCCTTCGATTATGTT+AGG | + | chr7_4:42045857-42045876 | None:intergenic | 35.0% |
| TTTACAAAGCTGGGATCTTA+AGG | + | chr7_4:42045940-42045959 | None:intergenic | 35.0% | |
| ! | TCTTTCTTTTTCTGTTCTGG+AGG | + | chr7_4:42046041-42046060 | None:intergenic | 35.0% |
| TTGAGAATTGACATTTGGGA+AGG | + | chr7_4:42046113-42046132 | None:intergenic | 35.0% | |
| ! | AGCGTTTGGTTAGTTAAGAT+AGG | + | chr7_4:42046235-42046254 | None:intergenic | 35.0% |
| TGAAATACTTTCTACGGGTT+AGG | + | chr7_4:42046333-42046352 | None:intergenic | 35.0% | |
| GACGTGGAACAATTTATTTG+AGG | + | chr7_4:42046386-42046405 | None:intergenic | 35.0% | |
| TAAATTGTTCCACGTCAAAG+TGG | - | chr7_4:42046390-42046409 | Msa1154560:CDS | 35.0% | |
| !! | CAACTTGTTAATCTGGAACA+AGG | + | chr7_4:42046476-42046495 | None:intergenic | 35.0% |
| TGTTCCAGATTAACAAGTTG+TGG | - | chr7_4:42046476-42046495 | Msa1154560:intron | 35.0% | |
| GTTCCAGATTAACAAGTTGT+GGG | - | chr7_4:42046477-42046496 | Msa1154560:intron | 35.0% | |
| !! | AATCCCACAACTTGTTAATC+TGG | + | chr7_4:42046483-42046502 | None:intergenic | 35.0% |
| AGATTAACAAGTTGTGGGAT+TGG | - | chr7_4:42046482-42046501 | Msa1154560:intron | 35.0% | |
| GATTAACAAGTTGTGGGATT+GGG | - | chr7_4:42046483-42046502 | Msa1154560:intron | 35.0% | |
| ATTAACAAGTTGTGGGATTG+GGG | - | chr7_4:42046484-42046503 | Msa1154560:intron | 35.0% | |
| GGTGTAAATGCATCTTCTAT+GGG | - | chr7_4:42046505-42046524 | Msa1154560:intron | 35.0% | |
| TAGGGCATACGATATTGAAT+CGG | + | chr7_4:42046667-42046686 | None:intergenic | 35.0% | |
| ATTCGTACATTAGAAGTTGG+AGG | + | chr7_4:42046794-42046813 | None:intergenic | 35.0% | |
| !! | AATCTGCCCTCTAAGATTAA+TGG | + | chr7_4:42046900-42046919 | None:intergenic | 35.0% |
| GACCCGATTAACTATTTGAA+TGG | + | chr7_4:42047039-42047058 | None:intergenic | 35.0% | |
| TACTATCCAGCAGACTTTAA+AGG | - | chr7_4:42047137-42047156 | Msa1154560:intron | 35.0% | |
| GTCTTTCAACTTCTTAACCA+TGG | + | chr7_4:42047370-42047389 | None:intergenic | 35.0% | |
| GTTGAAAGACCAACTATTTG+TGG | - | chr7_4:42047380-42047399 | Msa1154560:intron | 35.0% | |
| AAAACAGAGTATACAAGAGC+TGG | - | chr7_4:42047464-42047483 | Msa1154560:intron | 35.0% | |
| ATTATATCAGCTTACAGTGG+TGG | + | chr7_4:42047528-42047547 | None:intergenic | 35.0% | |
| !! | TTCTTATTAGCTTGCAGATC+TGG | - | chr7_4:42047684-42047703 | Msa1154560:intron | 35.0% |
| !! | CAGGTCACTTTAGTTGTTTT+AGG | + | chr7_4:42047789-42047808 | None:intergenic | 35.0% |
| ATAGGTTATACTGCAAAGCA+TGG | - | chr7_4:42047910-42047929 | Msa1154560:intron | 35.0% | |
| TCTCAACTTTGTTCTATCTC+GGG | - | chr7_4:42047951-42047970 | Msa1154560:intron | 35.0% | |
| !! | AATCCTGAGCTTTTGATAGT+TGG | + | chr7_4:42048065-42048084 | None:intergenic | 35.0% |
| !!! | ATGAGAAAAGTGCTTTTGCA+CGG | + | chr7_4:42048138-42048157 | None:intergenic | 35.0% |
| TTCAACCTCTATGAATTCAC+TGG | + | chr7_4:42048595-42048614 | None:intergenic | 35.0% | |
| TTGTTGCTGCTCAATATTTC+AGG | - | chr7_4:42048642-42048661 | Msa1154560:intron | 35.0% | |
| ! | GCTCAATATTTCAGGTAAGT+CGG | - | chr7_4:42048650-42048669 | Msa1154560:intron | 35.0% |
| ! | GTTTTTCATGTGTTGTCTGA+TGG | - | chr7_4:42048679-42048698 | Msa1154560:intron | 35.0% |
| TGGTTCAAGAGGAACAATTA+TGG | - | chr7_4:42048727-42048746 | Msa1154560:intron | 35.0% | |
| GGTTCAAGAGGAACAATTAT+GGG | - | chr7_4:42048728-42048747 | Msa1154560:intron | 35.0% | |
| GTTCAAGAGGAACAATTATG+GGG | - | chr7_4:42048729-42048748 | Msa1154560:intron | 35.0% | |
| AAATGTTGAGCATCTTGAGA+TGG | - | chr7_4:42048771-42048790 | Msa1154560:intron | 35.0% | |
| AATGAAACACGAAACTCTTC+AGG | + | chr7_4:42048832-42048851 | None:intergenic | 35.0% | |
| CAGTTATGATAATCCATCCA+TGG | - | chr7_4:42048855-42048874 | Msa1154560:intron | 35.0% | |
| TGAACATAATTGACCTAGTG+AGG | - | chr7_4:42049136-42049155 | Msa1154560:intron | 35.0% | |
| !! | AGGTTGATAAAAGAGGTTAG+TGG | - | chr7_4:42049192-42049211 | Msa1154560:intron | 35.0% |
| TAGTAGTAGAGGAGTCAAAT+TGG | - | chr7_4:42049483-42049502 | Msa1154560:intron | 35.0% | |
| AGTAGTAGAGGAGTCAAATT+GGG | - | chr7_4:42049484-42049503 | Msa1154560:intron | 35.0% | |
| CCCAACAAAATGAATGTACT+AGG | - | chr7_4:42049534-42049553 | Msa1154560:intron | 35.0% | |
| ! | GCCTAGTACATTCATTTTGT+TGG | + | chr7_4:42049538-42049557 | None:intergenic | 35.0% |
| ATGGTAGTTAATTGCCGTTA+GGG | + | chr7_4:42049639-42049658 | None:intergenic | 35.0% | |
| AATGGTAGTTAATTGCCGTT+AGG | + | chr7_4:42049640-42049659 | None:intergenic | 35.0% | |
| AACGGCAATTAACTACCATT+CGG | - | chr7_4:42049640-42049659 | Msa1154560:intron | 35.0% | |
| !! | ATTCGGGGAGGTTTTTAATT+CGG | - | chr7_4:42049657-42049676 | Msa1154560:intron | 35.0% |
| AACGGTAGTTAATTGCCATT+CGG | + | chr7_4:42049724-42049743 | None:intergenic | 35.0% | |
| ! | GTGTTTAATTGCTGTTCAGT+AGG | - | chr7_4:42049756-42049775 | Msa1154560:CDS | 35.0% |
| ATCCTCTTAAAAAATTGCCC+CGG | - | chr7_4:42049823-42049842 | Msa1154560:CDS | 35.0% | |
| ! | TTAACTATTCTCTGAAGACC+AGG | + | chr7_4:42049874-42049893 | None:intergenic | 35.0% |
| ! | CTGAGTGAGGAAGTTAGTTT+GGG | + | chr7_4:42043636-42043655 | None:intergenic | 40.0% |
| AAACTAACTTCCTCACTCAG+CGG | - | chr7_4:42043636-42043655 | Msa1154560:three_prime_UTR | 40.0% | |
| ! | CAGAAGTGTGAAAACTGTTG+TGG | + | chr7_4:42043993-42044012 | None:intergenic | 40.0% |
| ! | CACAACAGTTTTCACACTTC+TGG | - | chr7_4:42043991-42044010 | Msa1154560:three_prime_UTR | 40.0% |
| TACTTACATCTTGGCCAAAC+TGG | + | chr7_4:42044680-42044699 | None:intergenic | 40.0% | |
| GGTCAGACTTACTTACATCT+TGG | + | chr7_4:42044689-42044708 | None:intergenic | 40.0% | |
| ACTTGAGTTCGATTCATAGG+TGG | + | chr7_4:42044721-42044740 | None:intergenic | 40.0% | |
| TCTCCTGAACAAACGTTCTT+TGG | - | chr7_4:42044741-42044760 | Msa1154560:three_prime_UTR | 40.0% | |
| CACGAAACTTGCATGGATTT+AGG | - | chr7_4:42044958-42044977 | Msa1154560:three_prime_UTR | 40.0% | |
| ! | GCATGGATTTAGGCATTGTT+TGG | - | chr7_4:42044968-42044987 | Msa1154560:three_prime_UTR | 40.0% |
| TGAACAGAGAAATACTCCTC+CGG | - | chr7_4:42045121-42045140 | Msa1154560:intron | 40.0% | |
| TTGAATTGAATGCTTACCGG+AGG | + | chr7_4:42045140-42045159 | None:intergenic | 40.0% | |
| ACATGATGTTCGCCATAAAG+AGG | - | chr7_4:42045291-42045310 | Msa1154560:three_prime_UTR | 40.0% | |
| TTCTTCTAGCATTCTTCTGC+GGG | - | chr7_4:42045368-42045387 | Msa1154560:three_prime_UTR | 40.0% | |
| TGACTTGATTTATCTCCCTG+TGG | + | chr7_4:42045679-42045698 | None:intergenic | 40.0% | |
| GAGTATTATGCAGAGAACCT+TGG | + | chr7_4:42045740-42045759 | None:intergenic | 40.0% | |
| AGGTTCTCTGCATAATACTC+TGG | - | chr7_4:42045740-42045759 | Msa1154560:intron | 40.0% | |
| TTCTCTGCATAATACTCTGG+TGG | - | chr7_4:42045743-42045762 | Msa1154560:intron | 40.0% | |
| TACCTCTCAAGTCTCAACTA+GGG | + | chr7_4:42046202-42046221 | None:intergenic | 40.0% | |
| ATACCTCTCAAGTCTCAACT+AGG | + | chr7_4:42046203-42046222 | None:intergenic | 40.0% | |
| !! | TTGAGACTTGAGAGGTATCA+AGG | - | chr7_4:42046205-42046224 | Msa1154560:three_prime_UTR | 40.0% |
| CATAAACTGCACATTGCCAA+TGG | - | chr7_4:42046266-42046285 | Msa1154560:three_prime_UTR | 40.0% | |
| ! | AGACAGATATTTTGCGCCAT+TGG | + | chr7_4:42046285-42046304 | None:intergenic | 40.0% |
| !! | TTTCTACGGGTTAGGAACAA+AGG | + | chr7_4:42046325-42046344 | None:intergenic | 40.0% |
| GGGTGTAAATGCATCTTCTA+TGG | - | chr7_4:42046504-42046523 | Msa1154560:intron | 40.0% | |
| ! | ATCTTCTATGGGTTGTGTTG+TGG | - | chr7_4:42046516-42046535 | Msa1154560:intron | 40.0% |
| CAAATAGTTAATCGGGTCGT+AGG | - | chr7_4:42047041-42047060 | Msa1154560:intron | 40.0% | |
| GAGAGACTGTGAGTTTGATT+TGG | + | chr7_4:42047088-42047107 | None:intergenic | 40.0% | |
| CATCAGCAGAACTTGTCTTA+GGG | + | chr7_4:42047269-42047288 | None:intergenic | 40.0% | |
| TCATCAGCAGAACTTGTCTT+AGG | + | chr7_4:42047270-42047289 | None:intergenic | 40.0% | |
| ACAAGTTCTGCTGATGAAAC+TGG | - | chr7_4:42047273-42047292 | Msa1154560:intron | 40.0% | |
| AGAAGTTATGAAAGACGCCA+TGG | - | chr7_4:42047350-42047369 | Msa1154560:intron | 40.0% | |
| ! | AAGCTCTAGCCACAAATAGT+TGG | + | chr7_4:42047392-42047411 | None:intergenic | 40.0% |
| AACTGAAACATCTAAGCTGG+GGG | + | chr7_4:42047566-42047585 | None:intergenic | 40.0% | |
| CAACTGAAACATCTAAGCTG+GGG | + | chr7_4:42047567-42047586 | None:intergenic | 40.0% | |
| GCAACTGAAACATCTAAGCT+GGG | + | chr7_4:42047568-42047587 | None:intergenic | 40.0% | |
| AGCAACTGAAACATCTAAGC+TGG | + | chr7_4:42047569-42047588 | None:intergenic | 40.0% | |
| CTCAACTTTGTTCTATCTCG+GGG | - | chr7_4:42047952-42047971 | Msa1154560:intron | 40.0% | |
| AGTCAAGGTTCACAGAACAA+CGG | + | chr7_4:42048018-42048037 | None:intergenic | 40.0% | |
| TTCTGTGAACCTTGACTTTC+AGG | - | chr7_4:42048021-42048040 | Msa1154560:intron | 40.0% | |
| GAACCAACTATCAAAAGCTC+AGG | - | chr7_4:42048059-42048078 | Msa1154560:intron | 40.0% | |
| !!! | TGAGAAAAGTGCTTTTGCAC+GGG | + | chr7_4:42048137-42048156 | None:intergenic | 40.0% |
| AACATCCATCCTCTCTGATT+TGG | + | chr7_4:42048224-42048243 | None:intergenic | 40.0% | |
| ATCAACATTGTCGCAAACCA+CGG | + | chr7_4:42048272-42048291 | None:intergenic | 40.0% | |
| ATGCACCAGTGAATTCATAG+AGG | - | chr7_4:42048587-42048606 | Msa1154560:intron | 40.0% | |
| ! | ATTTCAGGTAAGTCGGAATC+AGG | - | chr7_4:42048657-42048676 | Msa1154560:intron | 40.0% |
| ! | CAATGAAGCTTTGGTTCAAG+AGG | - | chr7_4:42048716-42048735 | Msa1154560:intron | 40.0% |
| !! | TGACTTTTTCTCCCATGTCT+AGG | + | chr7_4:42049017-42049036 | None:intergenic | 40.0% |
| GACATGGGAGAAAAAGTCAA+TGG | - | chr7_4:42049018-42049037 | Msa1154560:intron | 40.0% | |
| GTAAGGCTAGGTCAATTGAA+AGG | - | chr7_4:42049060-42049079 | Msa1154560:intron | 40.0% | |
| TCAACCATAATTCCTGTGCT+TGG | - | chr7_4:42049103-42049122 | Msa1154560:intron | 40.0% | |
| ACATCCAAGCACAGGAATTA+TGG | + | chr7_4:42049110-42049129 | None:intergenic | 40.0% | |
| TAATTCCTGTGCTTGGATGT+CGG | - | chr7_4:42049110-42049129 | Msa1154560:intron | 40.0% | |
| ACATAATTGACCTAGTGAGG+TGG | - | chr7_4:42049139-42049158 | Msa1154560:intron | 40.0% | |
| TATAGCTGTGGTAGTAGTAG+AGG | - | chr7_4:42049472-42049491 | Msa1154560:intron | 40.0% | |
| ! | TTTAGGGTAATTTGAGGTGC+TGG | + | chr7_4:42049612-42049631 | None:intergenic | 40.0% |
| ! | GGGGTATTTAGGGTAATTTG+AGG | + | chr7_4:42049618-42049637 | None:intergenic | 40.0% |
| TTACCCTAAATACCCCCTAA+CGG | - | chr7_4:42049622-42049641 | Msa1154560:intron | 40.0% | |
| TGGTAGTTAATTGCCGTTAG+GGG | + | chr7_4:42049638-42049657 | None:intergenic | 40.0% | |
| ACGGCAATTAACTACCATTC+GGG | - | chr7_4:42049641-42049660 | Msa1154560:intron | 40.0% | |
| GAATTAAAAACCTCCCCGAA+TGG | + | chr7_4:42049658-42049677 | None:intergenic | 40.0% | |
| CCATTCGGCATCCTTTAAAT+CGG | + | chr7_4:42049709-42049728 | None:intergenic | 40.0% | |
| GCTGAGTGAGGAAGTTAGTT+TGG | + | chr7_4:42043637-42043656 | None:intergenic | 45.0% | |
| AATCAATCAACCGCTGAGTG+AGG | + | chr7_4:42043649-42043668 | None:intergenic | 45.0% | |
| AAGAAAGCGACGATGAAGAG+CGG | - | chr7_4:42043841-42043860 | Msa1154560:three_prime_UTR | 45.0% | |
| GGTCTCATCATTGCAGTTCT+CGG | - | chr7_4:42043919-42043938 | Msa1154560:three_prime_UTR | 45.0% | |
| ATTGACACGTATACGGACAC+CGG | - | chr7_4:42044434-42044453 | Msa1154560:three_prime_UTR | 45.0% | |
| CGACGTGTTAATGTCATGTC+CGG | + | chr7_4:42044456-42044475 | None:intergenic | 45.0% | |
| TGTCAGACATGGACACATGT+TGG | - | chr7_4:42044529-42044548 | Msa1154560:three_prime_UTR | 45.0% | |
| ! | GGTGTTAACCTTTGGGTTTC+CGG | - | chr7_4:42044635-42044654 | Msa1154560:three_prime_UTR | 45.0% |
| ! | GTGTTAACCTTTGGGTTTCC+GGG | - | chr7_4:42044636-42044655 | Msa1154560:three_prime_UTR | 45.0% |
| ! | TGTTAACCTTTGGGTTTCCG+GGG | - | chr7_4:42044637-42044656 | Msa1154560:three_prime_UTR | 45.0% |
| TTGGCCAAACTGGATTACCA+GGG | + | chr7_4:42044670-42044689 | None:intergenic | 45.0% | |
| CCACCAAAGAACGTTTGTTC+AGG | + | chr7_4:42044747-42044766 | None:intergenic | 45.0% | |
| CCTGAACAAACGTTCTTTGG+TGG | - | chr7_4:42044744-42044763 | Msa1154560:three_prime_UTR | 45.0% | |
| GTGGAGCTCATAATCCACTT+GGG | - | chr7_4:42044763-42044782 | Msa1154560:three_prime_UTR | 45.0% | |
| CCTCAGACACATCCTCTTTA+TGG | + | chr7_4:42045306-42045325 | None:intergenic | 45.0% | |
| CCATAAAGAGGATGTGTCTG+AGG | - | chr7_4:42045303-42045322 | Msa1154560:three_prime_UTR | 45.0% | |
| ! | AAGAGGATGTGTCTGAGGTA+CGG | - | chr7_4:42045308-42045327 | Msa1154560:three_prime_UTR | 45.0% |
| GTTTGAACCAACTCTTCCCA+AGG | - | chr7_4:42045720-42045739 | Msa1154560:intron | 45.0% | |
| !! | TTCTGTTCTGGAGGAATCTG+TGG | + | chr7_4:42046032-42046051 | None:intergenic | 45.0% |
| TCAAGTCTCAACTAGGGGAT+GGG | + | chr7_4:42046196-42046215 | None:intergenic | 45.0% | |
| ACCTCTCAAGTCTCAACTAG+GGG | + | chr7_4:42046201-42046220 | None:intergenic | 45.0% | |
| TAACTAACCAAACGCTCCCA+AGG | - | chr7_4:42046239-42046258 | Msa1154560:three_prime_UTR | 45.0% | |
| GTGCAGTTTATGCAGTCCTT+GGG | + | chr7_4:42046258-42046277 | None:intergenic | 45.0% | |
| TGTGCAGTTTATGCAGTCCT+TGG | + | chr7_4:42046259-42046278 | None:intergenic | 45.0% | |
| ! | ATAAAGAGGCCACTTTGACG+TGG | + | chr7_4:42046402-42046421 | None:intergenic | 45.0% |
| AGAAGTTGGAGGTGATTGCA+GGG | + | chr7_4:42046783-42046802 | None:intergenic | 45.0% | |
| TAGAAGTTGGAGGTGATTGC+AGG | + | chr7_4:42046784-42046803 | None:intergenic | 45.0% | |
| AGTCTCTCAGTCTCAGTCAA+TGG | + | chr7_4:42046869-42046888 | None:intergenic | 45.0% | |
| TGTTCAGTGCGACCATGTTT+AGG | + | chr7_4:42047238-42047257 | None:intergenic | 45.0% | |
| CATACGGTAGTTACTGTCTG+TGG | - | chr7_4:42047313-42047332 | Msa1154560:intron | 45.0% | |
| GAGACAGTTTGTCTTGTGCT+GGG | + | chr7_4:42047437-42047456 | None:intergenic | 45.0% | |
| ACTGAAACATCTAAGCTGGG+GGG | + | chr7_4:42047565-42047584 | None:intergenic | 45.0% | |
| GTTCACAGAACAACGGCATT+GGG | + | chr7_4:42048011-42048030 | None:intergenic | 45.0% | |
| CATGACATGCCTGAAAGTCA+AGG | + | chr7_4:42048033-42048052 | None:intergenic | 45.0% | |
| !!! | AGAAAAGTGCTTTTGCACGG+GGG | + | chr7_4:42048135-42048154 | None:intergenic | 45.0% |
| !!! | GAGAAAAGTGCTTTTGCACG+GGG | + | chr7_4:42048136-42048155 | None:intergenic | 45.0% |
| TGAGACCAAATCAGAGAGGA+TGG | - | chr7_4:42048216-42048235 | Msa1154560:intron | 45.0% | |
| TCAACATTGTCGCAAACCAC+GGG | + | chr7_4:42048271-42048290 | None:intergenic | 45.0% | |
| ! | AGGATGAAGCTGATTTCCAC+AGG | - | chr7_4:42048323-42048342 | Msa1154560:intron | 45.0% |
| ! | CAACAGTTAGTTTCAGTGCC+AGG | + | chr7_4:42048408-42048427 | None:intergenic | 45.0% |
| TAATGTGCTTGCAGCATCAG+TGG | - | chr7_4:42048516-42048535 | Msa1154560:intron | 45.0% | |
| CTGGTGCATGATTAGAAGCA+AGG | + | chr7_4:42048576-42048595 | None:intergenic | 45.0% | |
| AACACGAAACTCTTCAGGCA+AGG | + | chr7_4:42048827-42048846 | None:intergenic | 45.0% | |
| ATCCATGGGCCAGTTTAGAA+CGG | - | chr7_4:42048870-42048889 | Msa1154560:intron | 45.0% | |
| !! | ATCCCTTTGGAACCTAGACA+TGG | - | chr7_4:42049002-42049021 | Msa1154560:intron | 45.0% |
| !! | TCCCTTTGGAACCTAGACAT+GGG | - | chr7_4:42049003-42049022 | Msa1154560:intron | 45.0% |
| TCCCATGTCTAGGTTCCAAA+GGG | + | chr7_4:42049007-42049026 | None:intergenic | 45.0% | |
| CTGTGCAATTCTGCTCAGTA+AGG | - | chr7_4:42049043-42049062 | Msa1154560:intron | 45.0% | |
| CAATTCTGCTCAGTAAGGCT+AGG | - | chr7_4:42049048-42049067 | Msa1154560:intron | 45.0% | |
| AATTCCTGTGCTTGGATGTC+GGG | - | chr7_4:42049111-42049130 | Msa1154560:intron | 45.0% | |
| AACATCCTTAATCAGTGCCC+CGG | + | chr7_4:42049319-42049338 | None:intergenic | 45.0% | |
| AATCAACGGGCATGTTACAG+TGG | + | chr7_4:42049441-42049460 | None:intergenic | 45.0% | |
| !! | TTGCCGTTAGGGGGTATTTA+GGG | + | chr7_4:42049628-42049647 | None:intergenic | 45.0% |
| !! | ATTGCCGTTAGGGGGTATTT+AGG | + | chr7_4:42049629-42049648 | None:intergenic | 45.0% |
| GGTAGTTAATTGCCGTTAGG+GGG | + | chr7_4:42049637-42049656 | None:intergenic | 45.0% | |
| CGGCAATTAACTACCATTCG+GGG | - | chr7_4:42049642-42049661 | Msa1154560:intron | 45.0% | |
| CAATTAACTACCATTCGGGG+AGG | - | chr7_4:42049645-42049664 | Msa1154560:intron | 45.0% | |
| CCGATTTAAAGGATGCCGAA+TGG | - | chr7_4:42049706-42049725 | Msa1154560:CDS | 45.0% | |
| ! | AACTACCGTTTTGCAGCGAA+CGG | - | chr7_4:42049734-42049753 | Msa1154560:CDS | 45.0% |
| AAACACCGTTCGCTGCAAAA+CGG | + | chr7_4:42049742-42049761 | None:intergenic | 45.0% | |
| ! | ATTGCTGTTCAGTAGGTGAC+TGG | - | chr7_4:42049763-42049782 | Msa1154560:CDS | 45.0% |
| ! | TTGCTGTTCAGTAGGTGACT+GGG | - | chr7_4:42049764-42049783 | Msa1154560:CDS | 45.0% |
| !!! | GACCGGGGCAATTTTTTAAG+AGG | + | chr7_4:42049828-42049847 | None:intergenic | 45.0% |
| AAAATTGCCCCGGTCCAATA+TGG | - | chr7_4:42049833-42049852 | Msa1154560:exon | 45.0% | |
| AAATTGCCCCGGTCCAATAT+GGG | - | chr7_4:42049834-42049853 | Msa1154560:exon | 45.0% | |
| !! | TAATAATAATAATTAATAAC+TGG | + | chr7_4:42043707-42043726 | None:intergenic | 5.0% |
| !! | AGAAATATTTATATAAATAA+CGG | - | chr7_4:42045801-42045820 | Msa1154560:intron | 5.0% |
| !!! | TTAAATTTTAATTAATTTTC+AGG | - | chr7_4:42046722-42046741 | Msa1154560:intron | 5.0% |
| ACGATGAAGAGCGGTGGTTT+GGG | - | chr7_4:42043850-42043869 | Msa1154560:three_prime_UTR | 50.0% | |
| GTTCCTCTCGTCTTCCTTCT+CGG | - | chr7_4:42043964-42043983 | Msa1154560:three_prime_UTR | 50.0% | |
| AACTGTTGTGGAGACCGAGA+AGG | + | chr7_4:42043981-42044000 | None:intergenic | 50.0% | |
| !! | ACATGTGTCGGTGTCAGACA+TGG | - | chr7_4:42044518-42044537 | Msa1154560:three_prime_UTR | 50.0% |
| CTTGGCCAAACTGGATTACC+AGG | + | chr7_4:42044671-42044690 | None:intergenic | 50.0% | |
| GGTGGAGCTCATAATCCACT+TGG | - | chr7_4:42044762-42044781 | Msa1154560:three_prime_UTR | 50.0% | |
| TCCACTTGGGCACAATTGCT+TGG | - | chr7_4:42044776-42044795 | Msa1154560:three_prime_UTR | 50.0% | |
| ACCAAGCAATTGTGCCCAAG+TGG | + | chr7_4:42044780-42044799 | None:intergenic | 50.0% | |
| TTCTGCGGGATACTGTGTCA+CGG | - | chr7_4:42045382-42045401 | Msa1154560:three_prime_UTR | 50.0% | |
| CAGAGAACCTTGGGAAGAGT+TGG | + | chr7_4:42045730-42045749 | None:intergenic | 50.0% | |
| ! | TTCTGGAGGAATCTGTGGTC+CGG | + | chr7_4:42046027-42046046 | None:intergenic | 50.0% |
| CTCAACTAGGGGATGGGAAT+GGG | + | chr7_4:42046190-42046209 | None:intergenic | 50.0% | |
| TCTCAACTAGGGGATGGGAA+TGG | + | chr7_4:42046191-42046210 | None:intergenic | 50.0% | |
| CTCAAGTCTCAACTAGGGGA+TGG | + | chr7_4:42046197-42046216 | None:intergenic | 50.0% | |
| TCCCCTAGTTGAGACTTGAG+AGG | - | chr7_4:42046197-42046216 | Msa1154560:three_prime_UTR | 50.0% | |
| ATCGGGTCGTAGGAAATCAG+AGG | - | chr7_4:42047051-42047070 | Msa1154560:CDS | 50.0% | |
| CAGCAGAACTTGTCTTAGGG+TGG | + | chr7_4:42047266-42047285 | None:intergenic | 50.0% | |
| AAGTCGTGCGAGCTCACATA+CGG | - | chr7_4:42047297-42047316 | Msa1154560:intron | 50.0% | |
| ! | GCTGGGAGTTTTGCAATGCT+AGG | + | chr7_4:42047420-42047439 | None:intergenic | 50.0% |
| CGAGACAGTTTGTCTTGTGC+TGG | + | chr7_4:42047438-42047457 | None:intergenic | 50.0% | |
| ! | GAACAACGGCATTGGGTTTG+AGG | + | chr7_4:42048004-42048023 | None:intergenic | 50.0% |
| GGTTCACAGAACAACGGCAT+TGG | + | chr7_4:42048012-42048031 | None:intergenic | 50.0% | |
| GGGTTGAGACCAAATCAGAG+AGG | - | chr7_4:42048212-42048231 | Msa1154560:intron | 50.0% | |
| CAACATTGTCGCAAACCACG+GGG | + | chr7_4:42048270-42048289 | None:intergenic | 50.0% | |
| GGAATGCACTCTGTTTCCTG+TGG | + | chr7_4:42048342-42048361 | None:intergenic | 50.0% | |
| ! | GCCAAAGAGTTTTCACTGCC+TGG | - | chr7_4:42048387-42048406 | Msa1154560:CDS | 50.0% |
| GCCAGGCAGTGAAAACTCTT+TGG | + | chr7_4:42048391-42048410 | None:intergenic | 50.0% | |
| ! | GTTCTAAACTGGCCCATGGA+TGG | + | chr7_4:42048871-42048890 | None:intergenic | 50.0% |
| ! | TTCCGTTCTAAACTGGCCCA+TGG | + | chr7_4:42048875-42048894 | None:intergenic | 50.0% |
| AGCGAGACTTGTCATCCCTT+TGG | - | chr7_4:42048989-42049008 | Msa1154560:intron | 50.0% | |
| CTCCCATGTCTAGGTTCCAA+AGG | + | chr7_4:42049008-42049027 | None:intergenic | 50.0% | |
| ATTCCTGTGCTTGGATGTCG+GGG | - | chr7_4:42049112-42049131 | Msa1154560:intron | 50.0% | |
| CAAACTCTCTCCACCTCACT+AGG | + | chr7_4:42049152-42049171 | None:intergenic | 50.0% | |
| CTAGTGAGGTGGAGAGAGTT+TGG | - | chr7_4:42049150-42049169 | Msa1154560:intron | 50.0% | |
| ACATCCTTAATCAGTGCCCC+GGG | + | chr7_4:42049318-42049337 | None:intergenic | 50.0% | |
| TTGGGCTGAGCTCAATGCAT+TGG | - | chr7_4:42049502-42049521 | Msa1154560:intron | 50.0% | |
| GAGCAATTGCTACGTGCCTA+AGG | + | chr7_4:42049588-42049607 | None:intergenic | 50.0% | |
| CACACCTAGCAATTGCTCAC+AGG | + | chr7_4:42049792-42049811 | None:intergenic | 50.0% | |
| TATGTGGGGCCATCCCATAT+TGG | + | chr7_4:42049850-42049869 | None:intergenic | 50.0% | |
| TCTGAAGACCAGGCTATGTG+GGG | + | chr7_4:42049864-42049883 | None:intergenic | 50.0% | |
| ! | CTCTGAAGACCAGGCTATGT+GGG | + | chr7_4:42049865-42049884 | None:intergenic | 50.0% |
| ! | TCTCTGAAGACCAGGCTATG+TGG | + | chr7_4:42049866-42049885 | None:intergenic | 50.0% |
| AAAGCGACGATGAAGAGCGG+TGG | - | chr7_4:42043844-42043863 | Msa1154560:three_prime_UTR | 55.0% | |
| GACGATGAAGAGCGGTGGTT+TGG | - | chr7_4:42043849-42043868 | Msa1154560:three_prime_UTR | 55.0% | |
| GGCGCGGTTCAATCATCGTA+CGG | - | chr7_4:42043871-42043890 | Msa1154560:three_prime_UTR | 55.0% | |
| TCAATCATCGTACGGCGTCC+CGG | - | chr7_4:42043879-42043898 | Msa1154560:three_prime_UTR | 55.0% | |
| GAAGACGAGAGGAACGAGCA+TGG | + | chr7_4:42043959-42043978 | None:intergenic | 55.0% | |
| AGACCGAGAAGGAAGACGAG+AGG | + | chr7_4:42043970-42043989 | None:intergenic | 55.0% | |
| GCATGAACACTTCGGATCGC+AGG | + | chr7_4:42044567-42044586 | None:intergenic | 55.0% | |
| ! | ACCTTTGGGTTTCCGGGGAA+AGG | - | chr7_4:42044642-42044661 | Msa1154560:three_prime_UTR | 55.0% |
| ! | CCTTTGGGTTTCCGGGGAAA+GGG | - | chr7_4:42044643-42044662 | Msa1154560:three_prime_UTR | 55.0% |
| ! | CTTTGGGTTTCCGGGGAAAG+GGG | - | chr7_4:42044644-42044663 | Msa1154560:three_prime_UTR | 55.0% |
| ! | AGGATGTGTCTGAGGTACGG+TGG | - | chr7_4:42045311-42045330 | Msa1154560:three_prime_UTR | 55.0% |
| AGGGGATGGGAATGGGTACA+TGG | + | chr7_4:42046183-42046202 | None:intergenic | 55.0% | |
| !! | ATGCAGTCCTTGGGAGCGTT+TGG | + | chr7_4:42046249-42046268 | None:intergenic | 55.0% |
| GATTGCAGGGCAGCATTAGG+TGG | + | chr7_4:42046770-42046789 | None:intergenic | 55.0% | |
| GGTGATTGCAGGGCAGCATT+AGG | + | chr7_4:42046773-42046792 | None:intergenic | 55.0% | |
| ! | CACGGGGACTGATTTAGCTC+TGG | + | chr7_4:42048254-42048273 | None:intergenic | 55.0% |
| CAGAGCTAAATCAGTCCCCG+TGG | - | chr7_4:42048252-42048271 | Msa1154560:intron | 55.0% | |
| GGAAATGTTAACCGGTGCCC+CGG | - | chr7_4:42049297-42049316 | Msa1154560:intron | 55.0% | |
| GAAATGTTAACCGGTGCCCC+GGG | - | chr7_4:42049298-42049317 | Msa1154560:intron | 55.0% | |
| AAATGTTAACCGGTGCCCCG+GGG | - | chr7_4:42049299-42049318 | Msa1154560:intron | 55.0% | |
| CATCCTTAATCAGTGCCCCG+GGG | + | chr7_4:42049317-42049336 | None:intergenic | 55.0% | |
| GGTGCCTGTGAGCAATTGCT+AGG | - | chr7_4:42049785-42049804 | Msa1154560:CDS | 55.0% | |
| CCCTTTCCCCGGAAACCCAA+AGG | + | chr7_4:42044646-42044665 | None:intergenic | 60.0% | |
| ATTACCAGGGCCCCTTTCCC+CGG | + | chr7_4:42044657-42044676 | None:intergenic | 60.0% | |
| GGGGCCCTGGTAATCCAGTT+TGG | - | chr7_4:42044663-42044682 | Msa1154560:three_prime_UTR | 60.0% | |
| TTGGCGCACTTGTCTGCACC+AGG | - | chr7_4:42046432-42046451 | Msa1154560:CDS | 60.0% | |
| TGCAGGGCAGCATTAGGTGG+CGG | + | chr7_4:42046767-42046786 | None:intergenic | 60.0% | |
| CAACCCCGACATCCAAGCAC+AGG | + | chr7_4:42049118-42049137 | None:intergenic | 60.0% | |
| CGGGCATGTTACAGTGGCAC+TGG | + | chr7_4:42049435-42049454 | None:intergenic | 60.0% | |
| TGCCCCGGTCCAATATGGGA+TGG | - | chr7_4:42049838-42049857 | Msa1154560:exon | 60.0% | |
| GGCCATCCCATATTGGACCG+GGG | + | chr7_4:42049843-42049862 | None:intergenic | 60.0% | |
| GGGCCATCCCATATTGGACC+GGG | + | chr7_4:42049844-42049863 | None:intergenic | 60.0% | |
| GGGGCCATCCCATATTGGAC+CGG | + | chr7_4:42049845-42049864 | None:intergenic | 60.0% | |
| ! | GAAGAGCGGTGGTTTGGGCG+CGG | - | chr7_4:42043855-42043874 | Msa1154560:three_prime_UTR | 65.0% |
| CTCTCCACCGTCGTTTCGCC+GGG | + | chr7_4:42043900-42043919 | None:intergenic | 65.0% | |
| CCTCTCCACCGTCGTTTCGC+CGG | + | chr7_4:42043901-42043920 | None:intergenic | 65.0% | |
| ! | GCAGCATTAGGTGGCGGTGG+CGG | + | chr7_4:42046761-42046780 | None:intergenic | 65.0% |
| ! | AGGGCAGCATTAGGTGGCGG+TGG | + | chr7_4:42046764-42046783 | None:intergenic | 65.0% |
| TAATCAGTGCCCCGGGGCAC+CGG | + | chr7_4:42049311-42049330 | None:intergenic | 65.0% | |
| !! | GTGCCCCGGGGCACTGATTA+AGG | - | chr7_4:42049311-42049330 | Msa1154560:intron | 65.0% |
| TGGGATGGCCCCACATAGCC+TGG | - | chr7_4:42049853-42049872 | Msa1154560:five_prime_UTR | 65.0% | |
| ACGGCGTCCCGGCGAAACGA+CGG | - | chr7_4:42043890-42043909 | Msa1154560:three_prime_UTR | 70.0% | |
| CCGGCGAAACGACGGTGGAG+AGG | - | chr7_4:42043898-42043917 | Msa1154560:three_prime_UTR | 70.0% | |
| GTTTCCGGGGAAAGGGGCCC+TGG | - | chr7_4:42044650-42044669 | Msa1154560:three_prime_UTR | 70.0% | |
| ! | GCATTAGGTGGCGGTGGCGG+CGG | + | chr7_4:42046758-42046777 | None:intergenic | 70.0% |
| GCGTCCCGGCGAAACGACGG+TGG | - | chr7_4:42043893-42043912 | Msa1154560:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 42043617 | 42050083 | 42043617 | ID=Msa1154560;Name=Msa1154560 |
| chr7_4 | mRNA | 42043617 | 42050083 | 42043617 | ID=Msa1154560-mRNA-1;Parent=Msa1154560;Name=Msa1154560-mRNA-1;_AED=0.08;_eAED=0.08;_QI=236|1|1|1|0.77|0.7|10|1772|195 |
| chr7_4 | exon | 42043617 | 42044233 | 42043617 | ID=Msa1154560-mRNA-1:exon:10308;Parent=Msa1154560-mRNA-1 |
| chr7_4 | exon | 42044409 | 42045036 | 42044409 | ID=Msa1154560-mRNA-1:exon:10307;Parent=Msa1154560-mRNA-1 |
| chr7_4 | exon | 42045133 | 42045487 | 42045133 | ID=Msa1154560-mRNA-1:exon:10306;Parent=Msa1154560-mRNA-1 |
| chr7_4 | exon | 42046168 | 42046483 | 42046168 | ID=Msa1154560-mRNA-1:exon:10305;Parent=Msa1154560-mRNA-1 |
| chr7_4 | exon | 42046895 | 42046956 | 42046895 | ID=Msa1154560-mRNA-1:exon:10304;Parent=Msa1154560-mRNA-1 |
| chr7_4 | exon | 42047048 | 42047117 | 42047048 | ID=Msa1154560-mRNA-1:exon:10303;Parent=Msa1154560-mRNA-1 |
| chr7_4 | exon | 42047959 | 42048018 | 42047959 | ID=Msa1154560-mRNA-1:exon:10302;Parent=Msa1154560-mRNA-1 |
| chr7_4 | exon | 42048376 | 42048435 | 42048376 | ID=Msa1154560-mRNA-1:exon:10301;Parent=Msa1154560-mRNA-1 |
| chr7_4 | exon | 42048558 | 42048589 | 42048558 | ID=Msa1154560-mRNA-1:exon:10300;Parent=Msa1154560-mRNA-1 |
| chr7_4 | exon | 42049688 | 42050083 | 42049688 | ID=Msa1154560-mRNA-1:exon:10299;Parent=Msa1154560-mRNA-1 |
| chr7_4 | five_prime_UTR | 42049848 | 42050083 | 42049848 | ID=Msa1154560-mRNA-1:five_prime_utr;Parent=Msa1154560-mRNA-1 |
| chr7_4 | CDS | 42049688 | 42049847 | 42049688 | ID=Msa1154560-mRNA-1:cds;Parent=Msa1154560-mRNA-1 |
| chr7_4 | CDS | 42048558 | 42048589 | 42048558 | ID=Msa1154560-mRNA-1:cds;Parent=Msa1154560-mRNA-1 |
| chr7_4 | CDS | 42048376 | 42048435 | 42048376 | ID=Msa1154560-mRNA-1:cds;Parent=Msa1154560-mRNA-1 |
| chr7_4 | CDS | 42047959 | 42048018 | 42047959 | ID=Msa1154560-mRNA-1:cds;Parent=Msa1154560-mRNA-1 |
| chr7_4 | CDS | 42047048 | 42047117 | 42047048 | ID=Msa1154560-mRNA-1:cds;Parent=Msa1154560-mRNA-1 |
| chr7_4 | CDS | 42046895 | 42046956 | 42046895 | ID=Msa1154560-mRNA-1:cds;Parent=Msa1154560-mRNA-1 |
| chr7_4 | CDS | 42046340 | 42046483 | 42046340 | ID=Msa1154560-mRNA-1:cds;Parent=Msa1154560-mRNA-1 |
| chr7_4 | three_prime_UTR | 42046168 | 42046339 | 42046168 | ID=Msa1154560-mRNA-1:three_prime_utr;Parent=Msa1154560-mRNA-1 |
| chr7_4 | three_prime_UTR | 42045133 | 42045487 | 42045133 | ID=Msa1154560-mRNA-1:three_prime_utr;Parent=Msa1154560-mRNA-1 |
| chr7_4 | three_prime_UTR | 42044409 | 42045036 | 42044409 | ID=Msa1154560-mRNA-1:three_prime_utr;Parent=Msa1154560-mRNA-1 |
| chr7_4 | three_prime_UTR | 42043617 | 42044233 | 42043617 | ID=Msa1154560-mRNA-1:three_prime_utr;Parent=Msa1154560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
