AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1154600


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1154600 MtrunA17_Chr7g0245751 98.380 432 7 0 1 432 1 432 0.0 879
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1154600 AT4G00090.1 72.454 432 111 4 1 431 1 425 0.0 651
Msa1154600 AT4G32990.1 23.592 373 207 16 80 432 12 326 6.60e-12 67.0

Find 128 sgRNAs with CRISPR-Local

Find 574 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCCTGATGGACGAAATT+TGG 0.134819 7_4:+42127613 Msa1154600:CDS
CGCATTACATCATTTAATTC+TGG 0.188880 7_4:-42133743 None:intergenic
ACTCTGCTGCATCTTTAATT+TGG 0.212818 7_4:-42125377 None:intergenic
GGGAACACCTTCAGTGTCTT+TGG 0.241043 7_4:-42132671 None:intergenic
AATCTCCGATCAAAAGAAAA+TGG 0.272323 7_4:+42125498 Msa1154600:exon
GTGATTATTTGCTCAGAGTT+TGG 0.280324 7_4:-42132229 None:intergenic
GATCGGAGATTTGATGATTA+AGG 0.287940 7_4:-42125486 None:intergenic
TTCACCTGATGGAAAGATTC+TGG 0.293517 7_4:+42132748 Msa1154600:CDS
CAGGAACGGACATCATTCTT+TGG 0.298478 7_4:+42129697 Msa1154600:intron
TGTCGAGACTGGAAAGGTTT+TGG 0.301458 7_4:+42132805 Msa1154600:CDS
AAAGCAATAATTACTATGTT+TGG 0.304101 7_4:+42128961 Msa1154600:CDS
AGGACGGTTCCTTAAGAATA+TGG 0.309668 7_4:+42132260 Msa1154600:CDS
AACTTTGGTAGAGGAAATAT+TGG 0.312902 7_4:+42133782 Msa1154600:three_prime_UTR
TTCAAATGTTATGCAGCTTA+AGG 0.316013 7_4:+42130639 Msa1154600:CDS
ATTGGGTTTGGATTCGGATT+TGG 0.333005 7_4:-42125640 None:intergenic
GGCCATGGTGATGCAGTTAC+AGG 0.333345 7_4:+42127581 Msa1154600:CDS
ATTGATATTCCATATTCTTA+AGG 0.334674 7_4:-42132269 None:intergenic
TTATCAGAGGAATGGTGTTT+AGG 0.337844 7_4:-42125703 None:intergenic
GTAGAGTCACGAAGAGGAAT+TGG 0.340083 7_4:-42132692 None:intergenic
GAAGATGGCGCGATTGGGTT+TGG 0.342594 7_4:-42125652 None:intergenic
CACATGCCCCAAACTCTTCC+CGG 0.345712 7_4:-42129730 None:intergenic
TTTGGAGCGTCCGCTACTTA+TGG 0.351553 7_4:+42128979 Msa1154600:CDS
TCACTTGCAGGCGACATTAC+AGG 0.354181 7_4:+42132951 Msa1154600:intron
GACTTATCTTCAGAAACTTT+AGG 0.358893 7_4:-42128880 None:intergenic
TTACCCATAGGAATAGCTTT+AGG 0.374814 7_4:-42132987 None:intergenic
GGCGCGATTGGGTTTGGATT+CGG 0.397988 7_4:-42125646 None:intergenic
AGAAGAGAAAACGCAACAAT+GGG 0.407562 7_4:-42125532 None:intergenic
TCAAATGTTATGCAGCTTAA+GGG 0.416385 7_4:+42130640 Msa1154600:CDS
GGACTTCGGATTGACGTTTA+CGG 0.420698 7_4:-42125597 None:intergenic
CGATGTTCCCACTTAATCTC+CGG 0.421960 7_4:-42128922 None:intergenic
CACAGAATTAATTTGCCTCC+TGG 0.426988 7_4:+42128754 Msa1154600:CDS
TATTCTTAAGGAACCGTCCT+TGG 0.428813 7_4:-42132257 None:intergenic
ACAAAAGCTGCACTGTATCA+TGG 0.428922 7_4:+42133562 Msa1154600:three_prime_UTR
TCTTGAAGTTCGCTATCATA+TGG 0.443016 7_4:+42132640 Msa1154600:intron
GATTCTTGGGCATACCATCA+TGG 0.451369 7_4:-42132844 None:intergenic
ATTCTTGGGCATACCATCAT+GGG 0.451700 7_4:-42132843 None:intergenic
GATGGACGAAATTTGGCAAC+AGG 0.460035 7_4:+42127620 Msa1154600:CDS
TATGCAGCTTAAGGGGCATA+AGG 0.464062 7_4:+42130648 Msa1154600:CDS
TGCATCACCATGGCCTTTCA+AGG 0.464432 7_4:-42127573 None:intergenic
TAAACACCATTCCTCTGATA+AGG 0.467661 7_4:+42125705 Msa1154600:CDS
GGTTGTTCATTGTACATGTA+TGG 0.468235 7_4:+42128847 Msa1154600:CDS
ACAAGCAAAGCTTCCTCTCC+CGG 0.468521 7_4:+42128903 Msa1154600:CDS
GTTGCCAAATTTCGTCCATC+AGG 0.472098 7_4:-42127617 None:intergenic
CGCCTCAGTATTTCACCTGA+TGG 0.474853 7_4:+42132737 Msa1154600:CDS
GAATAGTGTATTAGTAACTT+TGG 0.477946 7_4:+42133767 Msa1154600:three_prime_UTR
ATGAGTTGTACAAACATAGA+TGG 0.481548 7_4:+42133677 Msa1154600:three_prime_UTR
GCTACTTATGGCAGTGCTGA+TGG 0.488490 7_4:+42128991 Msa1154600:CDS
TAGAGTCACGAAGAGGAATT+GGG 0.492229 7_4:-42132691 None:intergenic
ATTTGCGATGGATCGGACTT+CGG 0.493240 7_4:-42125611 None:intergenic
GCAGCCAGAATCTTTCCATC+AGG 0.493629 7_4:-42132752 None:intergenic
ATTCCTCTTCGTGACTCTAC+TGG 0.494301 7_4:+42132695 Msa1154600:CDS
TTGGATTTGAATACCTTGAA+AGG 0.495211 7_4:+42127560 Msa1154600:CDS
TTCCTCTCCCGGAGATTAAG+TGG 0.497136 7_4:+42128914 Msa1154600:CDS
TGTATTAGTAACTTTGGTAG+AGG 0.501754 7_4:+42133773 Msa1154600:three_prime_UTR
ATTGCAGTTGGAGGACCTCC+AGG 0.502096 7_4:-42128772 None:intergenic
AGAGTCAAAGCAGCAACATA+AGG 0.502764 7_4:-42133630 None:intergenic
GGGGCCTAAAGCTATTCCTA+TGG 0.502990 7_4:+42132983 Msa1154600:CDS
GATTGAGATTTGCGATGGAT+CGG 0.507273 7_4:-42125618 None:intergenic
CAGTGGTTAAGTGTCGAGAC+TGG 0.507986 7_4:+42132794 Msa1154600:CDS
TTCAAGGTATTCAAATCCAA+TGG 0.512823 7_4:-42127557 None:intergenic
AGCGTTCACTGCAGACGTTA+AGG 0.513771 7_4:+42129818 Msa1154600:CDS
GGTGAGAGTATTCAAGTTGG+AGG 0.518079 7_4:+42128607 Msa1154600:CDS
TTGTTCAGAGTGCTGTGACT+TGG 0.519779 7_4:+42132194 Msa1154600:intron
AAGAAGAGAAAACGCAACAA+TGG 0.521671 7_4:-42125533 None:intergenic
TAGTTGTCAGCAGTAGCATA+TGG 0.525900 7_4:-42133467 None:intergenic
CGACATTACAGGCATTGCAT+GGG 0.526095 7_4:+42132962 Msa1154600:CDS
TCAGCAAATGCAATTGCAGT+TGG 0.528703 7_4:-42128784 None:intergenic
GATGTTCCCACTTAATCTCC+GGG 0.529101 7_4:-42128921 None:intergenic
ACAAACATAGATGGTGTTGT+TGG 0.531822 7_4:+42133686 Msa1154600:three_prime_UTR
GCGACATTACAGGCATTGCA+TGG 0.531987 7_4:+42132961 Msa1154600:CDS
TTGAATACCTTGAAAGGCCA+TGG 0.533959 7_4:+42127566 Msa1154600:CDS
AGTCAAGCGGCATCATCCAT+TGG 0.534347 7_4:+42127541 Msa1154600:CDS
CGGGAAGAGTTTGGGGCATG+TGG 0.534451 7_4:+42129731 Msa1154600:CDS
GTGCAAACAGCTTGTGCTGA+TGG 0.534976 7_4:+42128581 Msa1154600:intron
ACGGACATCATTCTTTGGCA+TGG 0.536612 7_4:+42129702 Msa1154600:CDS
GGGATATGTTTCTCTCCTGA+TGG 0.536826 7_4:+42127602 Msa1154600:CDS
TTAAGAATATGGAATATCAA+TGG 0.537043 7_4:+42132271 Msa1154600:CDS
TATTTACTGTACCATGGTGA+GGG 0.538063 7_4:+42133858 Msa1154600:three_prime_UTR
AGCTGCAATGAAACGTCCAT+TGG 0.543756 7_4:-42129793 None:intergenic
CAAATGTTATGCAGCTTAAG+GGG 0.548411 7_4:+42130641 Msa1154600:CDS
TAGGTGAAAATGCAAATGGC+GGG 0.551879 7_4:-42125460 None:intergenic
GCAAATGCAATTGCAGTTGG+AGG 0.553636 7_4:-42128781 None:intergenic
CTGGGAGATTGTATATTCAA+AGG 0.557654 7_4:+42130597 Msa1154600:CDS
AGTGGTGAGAGTATTCAAGT+TGG 0.558329 7_4:+42128604 Msa1154600:CDS
AAGATTCTGGCTGCAACCCA+TGG 0.558899 7_4:+42132761 Msa1154600:CDS
ATTTGGATTGAGATTTGCGA+TGG 0.561949 7_4:-42125623 None:intergenic
TTATTTACTGTACCATGGTG+AGG 0.564174 7_4:+42133857 Msa1154600:three_prime_UTR
GACATTACAGGCATTGCATG+GGG 0.566726 7_4:+42132963 Msa1154600:CDS
ACCACTGCAATGTGGAACCA+TGG 0.567269 7_4:-42132778 None:intergenic
TCCCACTTAATCTCCGGGAG+AGG 0.568667 7_4:-42128916 None:intergenic
GCTGCAATGAAACGTCCATT+GGG 0.569996 7_4:-42129792 None:intergenic
GAGATTGTATATTCAAAGGA+TGG 0.573331 7_4:+42130601 Msa1154600:CDS
TGGACGATGGAAGAAAGAGC+AGG 0.573390 7_4:-42125424 None:intergenic
GCAAATAATCACTGCATCCA+AGG 0.580008 7_4:+42132240 Msa1154600:CDS
TTAATTGCATCGTGTTCAGA+AGG 0.582676 7_4:+42129021 Msa1154600:CDS
TCCTCTCCCGGAGATTAAGT+GGG 0.590082 7_4:+42128915 Msa1154600:CDS
GGGCCTAAAGCTATTCCTAT+GGG 0.601225 7_4:+42132984 Msa1154600:CDS
CCACTGCAATGTGGAACCAT+GGG 0.607190 7_4:-42132777 None:intergenic
GCCATGGTGATGCAGTTACA+GGG 0.611622 7_4:+42127582 Msa1154600:CDS
AATGAAAATTACCTTATCAG+AGG 0.612596 7_4:-42125716 None:intergenic
GTTAAGTGTCGAGACTGGAA+AGG 0.613018 7_4:+42132799 Msa1154600:CDS
GTGACAAGAAAGTGAAATTG+TGG 0.614006 7_4:+42133417 Msa1154600:CDS
AAATTACCTTATCAGAGGAA+TGG 0.614688 7_4:-42125711 None:intergenic
AGTTCGCTATCATATGGATG+AGG 0.619477 7_4:+42132646 Msa1154600:intron
GTGTCATCACACAATCTCAC+TGG 0.620767 7_4:+42128826 Msa1154600:CDS
ATCAGCACTGCCATAAGTAG+CGG 0.630073 7_4:-42128989 None:intergenic
TGACAAGAAAGTGAAATTGT+GGG 0.631764 7_4:+42133418 Msa1154600:CDS
CCCATGGTTCCACATTGCAG+TGG 0.633715 7_4:+42132777 Msa1154600:CDS
ATGGCTACTATATCACCCAA+TGG 0.633994 7_4:+42129777 Msa1154600:CDS
ATAATCACTGCATCCAAGGA+CGG 0.635724 7_4:+42132244 Msa1154600:CDS
TTAGGTGAAAATGCAAATGG+CGG 0.636024 7_4:-42125461 None:intergenic
AACAGCTTGTGCTGATGGAG+TGG 0.638047 7_4:+42128586 Msa1154600:intron
AGAATTAATTTGCCTCCTGG+AGG 0.640059 7_4:+42128757 Msa1154600:CDS
TGAGGATCCAAAGACACTGA+AGG 0.648025 7_4:+42132664 Msa1154600:CDS
AGGTGAAAATGCAAATGGCG+GGG 0.655899 7_4:-42125459 None:intergenic
GACACTTAACCACTGCAATG+TGG 0.660431 7_4:-42132786 None:intergenic
GTACCAGTAGAGTCACGAAG+AGG 0.665126 7_4:-42132698 None:intergenic
AACATAAGGATCAAGTCAAG+CGG 0.669504 7_4:+42127528 Msa1154600:intron
TTCCATCAGGTGAAATACTG+AGG 0.672850 7_4:-42132739 None:intergenic
AAAGAGCAGGATTGTACACG+TGG 0.677460 7_4:-42125411 None:intergenic
GAAGAGAAAACGCAACAATG+GGG 0.679220 7_4:-42125531 None:intergenic
TCCCTGTAACTGCATCACCA+TGG 0.687110 7_4:-42127583 None:intergenic
AAGGAATAATGCCCTCACCA+TGG 0.691369 7_4:-42133869 None:intergenic
ACATTACAGGCATTGCATGG+GGG 0.704948 7_4:+42132964 Msa1154600:CDS
ATTGTGTGATGACACAACAA+TGG 0.716207 7_4:-42128818 None:intergenic
GCAGTTGGAGGACCTCCAGG+AGG 0.740102 7_4:-42128769 None:intergenic
GGTGCACTAGTAGTTCACGA+TGG 0.754480 7_4:-42133446 None:intergenic
GTGTGATGACACAACAATGG+AGG 0.768302 7_4:-42128815 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATCAAAATAAAAAATCTA+GGG + chr7_4:42129142-42129161 Msa1154600:intron 10.0%
!! TTATCAAAATAAAAAATCTA+GGG - chr7_4:42129142-42129161 None:intergenic 10.0%
!!! GTATAATTCTATTTAATTTA+TGG + chr7_4:42129852-42129871 Msa1154600:intron 10.0%
!! TAAATTGAGAATTAAAATAT+AGG - chr7_4:42131323-42131342 None:intergenic 10.0%
!! TTACATGAAAAATAAAAAAA+AGG - chr7_4:42133034-42133053 None:intergenic 10.0%
!! ACTTATAAGATAATTGAAAT+TGG - chr7_4:42125744-42125763 None:intergenic 15.0%
!!! ATTTTCAATTTTGTATTATG+CGG + chr7_4:42127338-42127357 Msa1154600:intron 15.0%
!!! TTTATAGTTTGATTTTTGTT+TGG + chr7_4:42127486-42127505 Msa1154600:intron 15.0%
!!! AAGGCATAAAAATAAATTTT+GGG - chr7_4:42128380-42128399 None:intergenic 15.0%
!! CTTATCAAAATAAAAAATCT+AGG + chr7_4:42129141-42129160 Msa1154600:intron 15.0%
!!! ATAATTGTTGTATACTTTTA+AGG + chr7_4:42129285-42129304 Msa1154600:intron 15.0%
!!! TAATTGTTGTATACTTTTAA+GGG + chr7_4:42129286-42129305 Msa1154600:intron 15.0%
!! CTTATCAAAATAAAAAATCT+AGG - chr7_4:42129141-42129160 None:intergenic 15.0%
!!! AGATTTTTTATTTTGATAAG+CGG + chr7_4:42129427-42129446 Msa1154600:intron 15.0%
!!! TAAATTTTAGTAATTGTATG+AGG + chr7_4:42129532-42129551 Msa1154600:intron 15.0%
!! AAATCAACTTAAAAATAACA+TGG + chr7_4:42129758-42129777 Msa1154600:CDS 15.0%
!!! CATTATATTTTCAATTATGT+GGG + chr7_4:42130783-42130802 Msa1154600:intron 15.0%
!!! TTGATTTCTTTTAAAGAAAT+CGG - chr7_4:42130946-42130965 None:intergenic 15.0%
!! ACTTGAAGAAATTTATAATA+AGG - chr7_4:42131989-42132008 None:intergenic 15.0%
!! ATAAAAAAGATTTGATTCTT+GGG - chr7_4:42132860-42132879 None:intergenic 15.0%
!! AATAAAAAAGATTTGATTCT+TGG - chr7_4:42132861-42132880 None:intergenic 15.0%
!!! TGATTTTTTTTAATTGCAAT+TGG - chr7_4:42132889-42132908 None:intergenic 15.0%
!! AACATTTAACAAAAATAGTT+GGG - chr7_4:42133066-42133085 None:intergenic 15.0%
!!! AACTATTTTTGTTAAATGTT+GGG + chr7_4:42133066-42133085 Msa1154600:intron 15.0%
!!! TTAGGATTAGATTTTTTGTT+CGG - chr7_4:42125688-42125707 None:intergenic 20.0%
!!! TTGAGTGATTTTGTTATTTT+AGG + chr7_4:42125843-42125862 Msa1154600:intron 20.0%
!!! AAGCTTGATTTTCATTTTTA+GGG + chr7_4:42125916-42125935 Msa1154600:intron 20.0%
!!! CTATTTTCATTTAAGATTTG+TGG + chr7_4:42126467-42126486 Msa1154600:intron 20.0%
!!! ATTTTGCTGTTTTATGTTTT+TGG + chr7_4:42126796-42126815 Msa1154600:intron 20.0%
!!! TTTTGCTGTTTTATGTTTTT+GGG + chr7_4:42126797-42126816 Msa1154600:intron 20.0%
!! AAATTTACCAAAATCCTAAA+AGG - chr7_4:42127009-42127028 None:intergenic 20.0%
!!! TTTTCAATTTTGTATTATGC+GGG + chr7_4:42127339-42127358 Msa1154600:intron 20.0%
!! AACATTACTAGATATATCTT+CGG - chr7_4:42127718-42127737 None:intergenic 20.0%
!!! ATATGTGATCATTTTCAAAA+AGG - chr7_4:42127770-42127789 None:intergenic 20.0%
!!! TTTTTGAAAATGATCACATA+TGG + chr7_4:42127769-42127788 Msa1154600:intron 20.0%
!! GCAATAAAATTAATCAAAGT+GGG - chr7_4:42127999-42128018 None:intergenic 20.0%
!! TGCAATAAAATTAATCAAAG+TGG - chr7_4:42128000-42128019 None:intergenic 20.0%
!!! TGATTAATTTTATTGCAAAG+TGG + chr7_4:42128003-42128022 Msa1154600:intron 20.0%
!!! TTGAACATTTTTTACAATTG+TGG - chr7_4:42128269-42128288 None:intergenic 20.0%
!!! CAAGGCATAAAAATAAATTT+TGG - chr7_4:42128381-42128400 None:intergenic 20.0%
!! AAAGCAATAATTACTATGTT+TGG + chr7_4:42128961-42128980 Msa1154600:CDS 20.0%
!!! TTTCTTTTATGTTCTAATGT+GGG - chr7_4:42129064-42129083 None:intergenic 20.0%
!!! TTTTCTTTTATGTTCTAATG+TGG - chr7_4:42129065-42129084 None:intergenic 20.0%
!! AAGTATACAACAATTATGAA+GGG - chr7_4:42129282-42129301 None:intergenic 20.0%
!! AAAGTATACAACAATTATGA+AGG - chr7_4:42129283-42129302 None:intergenic 20.0%
!!! AAAACAGAGCATTTATTTTA+GGG - chr7_4:42129569-42129588 None:intergenic 20.0%
!!! AAAAACAGAGCATTTATTTT+AGG - chr7_4:42129570-42129589 None:intergenic 20.0%
!! AAATAGATTAAAACCTAATG+TGG - chr7_4:42130243-42130262 None:intergenic 20.0%
!!! ACATTAGGTTTTAATCTATT+TGG + chr7_4:42130242-42130261 Msa1154600:intron 20.0%
!! GAATTGTAATAAATAAATGC+AGG - chr7_4:42130289-42130308 None:intergenic 20.0%
!! TGAAAATATAATGCATTTGA+TGG - chr7_4:42130776-42130795 None:intergenic 20.0%
!!! GCATTATATTTTCAATTATG+TGG + chr7_4:42130782-42130801 Msa1154600:intron 20.0%
!! ATAAATTGTAAAGTTATACC+TGG + chr7_4:42130985-42131004 Msa1154600:intron 20.0%
!!! ACTGCTAATTTTAAGAATAT+AGG - chr7_4:42131424-42131443 None:intergenic 20.0%
!! TAAATAAAAATGATCATGCT+AGG + chr7_4:42131515-42131534 Msa1154600:intron 20.0%
!! AAATAAAAATGATCATGCTA+GGG + chr7_4:42131516-42131535 Msa1154600:intron 20.0%
!!! ATTTGGAGGTTTTTAAATAA+AGG + chr7_4:42131560-42131579 Msa1154600:intron 20.0%
!! AACCTTTATTCTAATAGATA+CGG - chr7_4:42131796-42131815 None:intergenic 20.0%
!! CATAAAGTTGCAAATATTAT+AGG + chr7_4:42131817-42131836 Msa1154600:intron 20.0%
!! ATTGATATTCCATATTCTTA+AGG - chr7_4:42132272-42132291 None:intergenic 20.0%
!! TTAAGAATATGGAATATCAA+TGG + chr7_4:42132271-42132290 Msa1154600:CDS 20.0%
!!! TTTTTTTAATTGCAATTGGT+AGG - chr7_4:42132885-42132904 None:intergenic 20.0%
!! CAACATTTAACAAAAATAGT+TGG - chr7_4:42133067-42133086 None:intergenic 20.0%
!!! CAACTATTTTTGTTAAATGT+TGG + chr7_4:42133065-42133084 Msa1154600:intron 20.0%
!!! ACTATTTTTGTTAAATGTTG+GGG + chr7_4:42133067-42133086 Msa1154600:intron 20.0%
!! AAACAACCAATAAATACATA+AGG + chr7_4:42133092-42133111 Msa1154600:intron 20.0%
!! AATTGTCCTTATGTATTTAT+TGG - chr7_4:42133101-42133120 None:intergenic 20.0%
!!! AAATTTTGTTGATAACCTTA+CGG + chr7_4:42133213-42133232 Msa1154600:intron 20.0%
!! TTAAAATCATATTAACCGTA+AGG - chr7_4:42133231-42133250 None:intergenic 20.0%
!!! ATTCTTTTATTTTTTGGTAG+AGG - chr7_4:42133304-42133323 None:intergenic 20.0%
!!! CGATACATTCTTTTATTTTT+TGG - chr7_4:42133310-42133329 None:intergenic 20.0%
!!! GATTTGATGATTAAGGTTTT+AGG - chr7_4:42125482-42125501 None:intergenic 25.0%
!! TTCATCCATTTTCTTTTGAT+CGG - chr7_4:42125506-42125525 None:intergenic 25.0%
! AATGAAAATTACCTTATCAG+AGG - chr7_4:42125719-42125738 None:intergenic 25.0%
!!! AGTGATTTTGTTATTTTAGG+AGG + chr7_4:42125846-42125865 Msa1154600:intron 25.0%
!!! GTGATTTTGTTATTTTAGGA+GGG + chr7_4:42125847-42125866 Msa1154600:intron 25.0%
!!! GAAGCTTGATTTTCATTTTT+AGG + chr7_4:42125915-42125934 Msa1154600:intron 25.0%
! ATAACATTAGAGAAAGAGTT+GGG + chr7_4:42126084-42126103 Msa1154600:intron 25.0%
! AGCATTTATCATAGAAAAGA+CGG + chr7_4:42126109-42126128 Msa1154600:intron 25.0%
! GATTTGTAGATTCTGTAATA+AGG + chr7_4:42126171-42126190 Msa1154600:intron 25.0%
!! TTTGACATTTTCATTGTTTC+CGG + chr7_4:42126606-42126625 Msa1154600:intron 25.0%
! AAAAAATTGTCTTGCATTTC+CGG - chr7_4:42126628-42126647 None:intergenic 25.0%
! GTTAACAAGTTTCCAAAAAT+TGG + chr7_4:42126664-42126683 Msa1154600:intron 25.0%
!! AAGGATAAAAGACCAATTTT+TGG - chr7_4:42126679-42126698 None:intergenic 25.0%
!!! TGGGTTGTTTTTTTAGATTT+TGG + chr7_4:42126816-42126835 Msa1154600:intron 25.0%
! AAATCCTAAAAGGAAAAGTT+GGG - chr7_4:42126999-42127018 None:intergenic 25.0%
! AAAATCCTAAAAGGAAAAGT+TGG - chr7_4:42127000-42127019 None:intergenic 25.0%
!!! AACTTTTCCTTTTAGGATTT+TGG + chr7_4:42126999-42127018 Msa1154600:intron 25.0%
!! TTTTGATAGACAAATGTTAG+TGG + chr7_4:42127032-42127051 Msa1154600:intron 25.0%
!!! ATGTTAGTGGTTAATTTGTT+AGG + chr7_4:42127045-42127064 Msa1154600:intron 25.0%
!! AGTTGGTTATTGGATTTTAA+TGG + chr7_4:42127193-42127212 Msa1154600:intron 25.0%
!!! GTTAACTAGCTATTATTTTG+TGG + chr7_4:42127282-42127301 Msa1154600:intron 25.0%
!!! TAAGGATTTTAAGTTGCTAT+AGG + chr7_4:42127379-42127398 Msa1154600:intron 25.0%
! AAACGAAACACAACATTTAT+TGG + chr7_4:42127439-42127458 Msa1154600:intron 25.0%
! AAATTATACTGAAGACATCA+CGG + chr7_4:42128215-42128234 Msa1154600:intron 25.0%
! TTGTAAAAAATGTTCAAGTG+AGG + chr7_4:42128272-42128291 Msa1154600:intron 25.0%
! CGATATGTATATGTATAAAG+AGG - chr7_4:42128673-42128692 None:intergenic 25.0%
! ATTTAGTGGTCAAATATCTA+AGG + chr7_4:42129113-42129132 Msa1154600:intron 25.0%
!! AATAAAAAATCTAGGGCATA+AGG + chr7_4:42129149-42129168 Msa1154600:intron 25.0%
!! AATAAAAAATCTAGGGCATA+AGG - chr7_4:42129149-42129168 None:intergenic 25.0%
!! ACTTGCTAAGGATTTAAAAA+TGG - chr7_4:42130008-42130027 None:intergenic 25.0%
! AGCATGTCCAAATAAATAAA+GGG - chr7_4:42130056-42130075 None:intergenic 25.0%
! TAGCATGTCCAAATAAATAA+AGG - chr7_4:42130057-42130076 None:intergenic 25.0%
! TGAAAAAGAAATAAGCAACA+TGG + chr7_4:42130312-42130331 Msa1154600:intron 25.0%
! TTTGCAGCATTATCTAAATT+TGG - chr7_4:42130453-42130472 None:intergenic 25.0%
! AATTTAGATAATGCTGCAAA+AGG + chr7_4:42130453-42130472 Msa1154600:intron 25.0%
!! AATAACAGTGAATCAGTTTT+CGG - chr7_4:42130537-42130556 None:intergenic 25.0%
!!! ATTTTTTGACAAAATGTGAG+AGG + chr7_4:42130808-42130827 Msa1154600:intron 25.0%
! AAGAAATCAAGTAGAATAGA+TGG + chr7_4:42130956-42130975 Msa1154600:intron 25.0%
! TAGATCTAAATTAAGCAACT+TGG - chr7_4:42131298-42131317 None:intergenic 25.0%
!!! AATAAAGGAGCTTTTAGAAA+AGG + chr7_4:42131575-42131594 Msa1154600:intron 25.0%
!!! ATAAAGGAGCTTTTAGAAAA+GGG + chr7_4:42131576-42131595 Msa1154600:intron 25.0%
! TCAAAATACTTAGAGAATCT+AGG + chr7_4:42131641-42131660 Msa1154600:intron 25.0%
! CAAAATACTTAGAGAATCTA+GGG + chr7_4:42131642-42131661 Msa1154600:intron 25.0%
! AAAATACTTAGAGAATCTAG+GGG + chr7_4:42131643-42131662 Msa1154600:intron 25.0%
!!! CAAAGTATGAAGGTTTTTTA+GGG + chr7_4:42131674-42131693 Msa1154600:intron 25.0%
!!! AAAGTATGAAGGTTTTTTAG+GGG + chr7_4:42131675-42131694 Msa1154600:intron 25.0%
! TTCCGTATCTATTAGAATAA+AGG + chr7_4:42131791-42131810 Msa1154600:intron 25.0%
! ATAAACCATGGAAAATACAA+GGG + chr7_4:42131852-42131871 Msa1154600:intron 25.0%
!!! TTATTTTTCACTCGTCAAAT+TGG + chr7_4:42132314-42132333 Msa1154600:intron 25.0%
! AACATATGTTTCTTGAACTA+TGG - chr7_4:42132477-42132496 None:intergenic 25.0%
! GTTCAAGAAACATATGTTAA+TGG + chr7_4:42132479-42132498 Msa1154600:intron 25.0%
! AGGAAATAATCAATGAGTTA+AGG - chr7_4:42132931-42132950 None:intergenic 25.0%
! GAATAGTGTATTAGTAACTT+TGG + chr7_4:42133767-42133786 Msa1154600:three_prime_UTR 25.0%
!!! CATTTTTATTTACTGTACCA+TGG + chr7_4:42133852-42133871 Msa1154600:three_prime_UTR 25.0%
!! GTTTTAGGTGAAAATGCAAA+TGG - chr7_4:42125467-42125486 None:intergenic 30.0%
AATCTCCGATCAAAAGAAAA+TGG + chr7_4:42125498-42125517 Msa1154600:exon 30.0%
!!! TTAGATTTTTTGTTCGGAAG+TGG - chr7_4:42125682-42125701 None:intergenic 30.0%
AAATTACCTTATCAGAGGAA+TGG - chr7_4:42125714-42125733 None:intergenic 30.0%
!! TATGCATGGTTGATTTTATG+TGG + chr7_4:42125806-42125825 Msa1154600:intron 30.0%
!!! TTTCATTTTTAGGGTGTTTG+TGG + chr7_4:42125925-42125944 Msa1154600:intron 30.0%
ACTGGAAAGTAGTATAGTAT+TGG + chr7_4:42125950-42125969 Msa1154600:intron 30.0%
!!! ATTTACTGAGAGTTTTAGAG+AGG + chr7_4:42126009-42126028 Msa1154600:intron 30.0%
GATAACATTAGAGAAAGAGT+TGG + chr7_4:42126083-42126102 Msa1154600:intron 30.0%
TAACATTAGAGAAAGAGTTG+GGG + chr7_4:42126085-42126104 Msa1154600:intron 30.0%
AATAAGGAGAGTAGATTAGA+TGG + chr7_4:42126187-42126206 Msa1154600:intron 30.0%
! TGATTCAGGTTCAAAAACTT+AGG + chr7_4:42126411-42126430 Msa1154600:intron 30.0%
! GATTCAGGTTCAAAAACTTA+GGG + chr7_4:42126412-42126431 Msa1154600:intron 30.0%
! AATGTTTTCACGAAATAGAC+CGG - chr7_4:42126438-42126457 None:intergenic 30.0%
AGAAGATAAAATGCTAGCTA+TGG + chr7_4:42126548-42126567 Msa1154600:intron 30.0%
TTGGATGTTATGTCTATATG+TGG + chr7_4:42126835-42126854 Msa1154600:intron 30.0%
AATTATACCAAACTCTAGCA+AGG - chr7_4:42126892-42126911 None:intergenic 30.0%
ATCGAATGAGACTATTATGT+AGG - chr7_4:42127113-42127132 None:intergenic 30.0%
AACTTACAAGTTGTAATCTC+AGG + chr7_4:42127224-42127243 Msa1154600:intron 30.0%
!!! TTGGCTTAACCTTTTGTTTT+TGG + chr7_4:42127505-42127524 Msa1154600:intron 30.0%
CCTTATGTTCCAAAAACAAA+AGG - chr7_4:42127517-42127536 None:intergenic 30.0%
!!! CCTTTTGTTTTTGGAACATA+AGG + chr7_4:42127514-42127533 Msa1154600:intron 30.0%
! TTCAAGGTATTCAAATCCAA+TGG - chr7_4:42127560-42127579 None:intergenic 30.0%
TTGGATTTGAATACCTTGAA+AGG + chr7_4:42127560-42127579 Msa1154600:CDS 30.0%
AATAATTCTTGCAAGCCTAT+TGG - chr7_4:42127861-42127880 None:intergenic 30.0%
AACACAAACGAAGAAACTAA+TGG - chr7_4:42127946-42127965 None:intergenic 30.0%
TGCAATCTTAGATTGGAATT+TGG - chr7_4:42128119-42128138 None:intergenic 30.0%
TCTTCAGTATAATTTCTCGT+AGG - chr7_4:42128210-42128229 None:intergenic 30.0%
AATTATACTGAAGACATCAC+GGG + chr7_4:42128216-42128235 Msa1154600:intron 30.0%
!! GTGGAATAAAACTATTTCTG+TGG - chr7_4:42128250-42128269 None:intergenic 30.0%
GTAATTACTTAGTGACAACA+AGG - chr7_4:42128399-42128418 None:intergenic 30.0%
GACTTATCTTCAGAAACTTT+AGG - chr7_4:42128883-42128902 None:intergenic 30.0%
GAAACCTTTACACTATTTAG+TGG + chr7_4:42129099-42129118 Msa1154600:intron 30.0%
TTGACCACTAAATAGTGTAA+AGG - chr7_4:42129462-42129481 None:intergenic 30.0%
! TTTTACTTAGAAGTAGCTAG+AGG - chr7_4:42129251-42129270 None:intergenic 30.0%
TATACAACAATTATGAAGGG+AGG - chr7_4:42129279-42129298 None:intergenic 30.0%
!! TGTATACTTTTAAGGGAGAT+TGG + chr7_4:42129293-42129312 Msa1154600:intron 30.0%
TTGACCACTAAATAGTGTAA+AGG + chr7_4:42129462-42129481 Msa1154600:intron 30.0%
GAAACCTTTACACTATTTAG+TGG - chr7_4:42129099-42129118 None:intergenic 30.0%
!!! CTCTGTTTTTTACTTTCACT+GGG + chr7_4:42129580-42129599 Msa1154600:intron 30.0%
TCATATCGAACATTATGTTG+TGG - chr7_4:42129640-42129659 None:intergenic 30.0%
! AGCATGACCCTTTATTTATT+TGG + chr7_4:42130046-42130065 Msa1154600:intron 30.0%
ATCCAATACACCTATTCTAT+TGG + chr7_4:42130380-42130399 Msa1154600:intron 30.0%
TTCCAATAGAATAGGTGTAT+TGG - chr7_4:42130385-42130404 None:intergenic 30.0%
AGATACACGTATTTCAGTTT+CGG - chr7_4:42130408-42130427 None:intergenic 30.0%
AAAAGGTTGTAACACTATTG+AGG + chr7_4:42130470-42130489 Msa1154600:intron 30.0%
CACTATTGAGGACTATAAAT+AGG + chr7_4:42130482-42130501 Msa1154600:intron 30.0%
TTGCTTGTTTAATGTCTTTC+AGG + chr7_4:42130573-42130592 Msa1154600:intron 30.0%
GAGATTGTATATTCAAAGGA+TGG + chr7_4:42130601-42130620 Msa1154600:CDS 30.0%
TTCAAATGTTATGCAGCTTA+AGG + chr7_4:42130639-42130658 Msa1154600:CDS 30.0%
TCAAATGTTATGCAGCTTAA+GGG + chr7_4:42130640-42130659 Msa1154600:CDS 30.0%
CTATTCATCATGTCAAAATC+AGG - chr7_4:42130722-42130741 None:intergenic 30.0%
! AGCAGAGAAGAAATTTTTCT+GGG - chr7_4:42131080-42131099 None:intergenic 30.0%
! AAGCAGAGAAGAAATTTTTC+TGG - chr7_4:42131081-42131100 None:intergenic 30.0%
AAGTAGTGATGATCAATGAT+GGG + chr7_4:42131164-42131183 Msa1154600:intron 30.0%
TTAAGTAGACGGATAAATGA+AGG + chr7_4:42131229-42131248 Msa1154600:intron 30.0%
TTCTTAAAATTAGCAGTGTC+AGG + chr7_4:42131427-42131446 Msa1154600:intron 30.0%
AATGATCAAATGGTTGCATT+TGG + chr7_4:42131543-42131562 Msa1154600:intron 30.0%
!!! CTCTAAGTATTTTGAAACCT+TGG - chr7_4:42131636-42131655 None:intergenic 30.0%
CCTAAAAAACCTTCATACTT+TGG - chr7_4:42131676-42131695 None:intergenic 30.0%
!!! CCAAAGTATGAAGGTTTTTT+AGG + chr7_4:42131673-42131692 Msa1154600:intron 30.0%
AACATAAAGTTAAGCTTCGT+AGG + chr7_4:42131712-42131731 Msa1154600:intron 30.0%
CAGAATAAACTCATAAACCA+TGG + chr7_4:42131840-42131859 Msa1154600:intron 30.0%
CATAAACCATGGAAAATACA+AGG + chr7_4:42131851-42131870 Msa1154600:intron 30.0%
TAGCAATTATATTGCTTCCA+TGG - chr7_4:42131946-42131965 None:intergenic 30.0%
! CAAATTGTCTCATTTTCTAG+AGG - chr7_4:42132094-42132113 None:intergenic 30.0%
!!! TTTTCAGCTTTAAAATCGCA+TGG - chr7_4:42132412-42132431 None:intergenic 30.0%
!!! TGCGATTTTAAAGCTGAAAA+TGG + chr7_4:42132412-42132431 Msa1154600:intron 30.0%
!! TCCACAATACTTATTTTCAC+TGG + chr7_4:42132451-42132470 Msa1154600:intron 30.0%
ATATTAGCATCTTTACCCAT+AGG - chr7_4:42133002-42133021 None:intergenic 30.0%
AATAAATGTTGTGCCAAATC+TGG + chr7_4:42133146-42133165 Msa1154600:intron 30.0%
TAATACGGAAAATTACATGC+TGG - chr7_4:42133341-42133360 None:intergenic 30.0%
AAAGGCAACAGTGTTTAATA+CGG - chr7_4:42133356-42133375 None:intergenic 30.0%
!!! ACTTTTTCATTTCCTGCAAA+AGG - chr7_4:42133374-42133393 None:intergenic 30.0%
TGACAAGAAAGTGAAATTGT+GGG + chr7_4:42133418-42133437 Msa1154600:CDS 30.0%
ATGAGTTGTACAAACATAGA+TGG + chr7_4:42133677-42133696 Msa1154600:three_prime_UTR 30.0%
CGCATTACATCATTTAATTC+TGG - chr7_4:42133746-42133765 None:intergenic 30.0%
TGTATTAGTAACTTTGGTAG+AGG + chr7_4:42133773-42133792 Msa1154600:three_prime_UTR 30.0%
AACTTTGGTAGAGGAAATAT+TGG + chr7_4:42133782-42133801 Msa1154600:three_prime_UTR 30.0%
ACTCTGCTGCATCTTTAATT+TGG - chr7_4:42125380-42125399 None:intergenic 35.0%
TTAGGTGAAAATGCAAATGG+CGG - chr7_4:42125464-42125483 None:intergenic 35.0%
! GATCGGAGATTTGATGATTA+AGG - chr7_4:42125489-42125508 None:intergenic 35.0%
AGAAGAGAAAACGCAACAAT+GGG - chr7_4:42125535-42125554 None:intergenic 35.0%
AAGAAGAGAAAACGCAACAA+TGG - chr7_4:42125536-42125555 None:intergenic 35.0%
ATTTGGATTGAGATTTGCGA+TGG - chr7_4:42125626-42125645 None:intergenic 35.0%
TTATCAGAGGAATGGTGTTT+AGG - chr7_4:42125706-42125725 None:intergenic 35.0%
TAAACACCATTCCTCTGATA+AGG + chr7_4:42125705-42125724 Msa1154600:CDS 35.0%
GTGTGAGATTTGATTATGCA+TGG + chr7_4:42125792-42125811 Msa1154600:intron 35.0%
TAGAAAAGACGGTGTAAACT+TGG + chr7_4:42126120-42126139 Msa1154600:intron 35.0%
AGTTAAATCACTAGAGGAAG+AGG + chr7_4:42126215-42126234 Msa1154600:intron 35.0%
TTGTGAAGATTGTGTGATTC+AGG + chr7_4:42126397-42126416 Msa1154600:intron 35.0%
! TTTGAAGTGAGTCATTGTGA+TGG + chr7_4:42126523-42126542 Msa1154600:intron 35.0%
! TCTTTTATCCTTGCTAGCTA+TGG + chr7_4:42126687-42126706 Msa1154600:intron 35.0%
! CTTTTATCCTTGCTAGCTAT+GGG + chr7_4:42126688-42126707 Msa1154600:intron 35.0%
GTAATCACAAGTACTACAAC+CGG - chr7_4:42126722-42126741 None:intergenic 35.0%
!! CTCATAACTTACGCTGTTTT+CGG + chr7_4:42126745-42126764 Msa1154600:intron 35.0%
!! TCATAACTTACGCTGTTTTC+GGG + chr7_4:42126746-42126765 Msa1154600:intron 35.0%
ATCTCCACAAAAGTTACCAA+AGG - chr7_4:42126778-42126797 None:intergenic 35.0%
!! TGGTTAATTTGTTAGGAGAG+AGG + chr7_4:42127052-42127071 Msa1154600:intron 35.0%
!! GGTTAATTTGTTAGGAGAGA+GGG + chr7_4:42127053-42127072 Msa1154600:intron 35.0%
GAATGAGACTATTATGTAGG+AGG - chr7_4:42127110-42127129 None:intergenic 35.0%
ATGTTGCCAAAACCCTAAAA+AGG - chr7_4:42127172-42127191 None:intergenic 35.0%
TGGCAACATTAGTTGGTTAT+TGG + chr7_4:42127183-42127202 Msa1154600:intron 35.0%
! TCAATTTTGTATTATGCGGG+TGG + chr7_4:42127342-42127361 Msa1154600:intron 35.0%
! CAATTTTGTATTATGCGGGT+GGG + chr7_4:42127343-42127362 Msa1154600:intron 35.0%
ACTTTCAAATGTCATTGTGC+TGG + chr7_4:42127407-42127426 Msa1154600:intron 35.0%
AACATAAGGATCAAGTCAAG+CGG + chr7_4:42127528-42127547 Msa1154600:intron 35.0%
!! TTCGGTTGATGAAATCATGA+TGG - chr7_4:42127700-42127719 None:intergenic 35.0%
!! AAAGGTTGATGCAATCAAGA+CGG - chr7_4:42127752-42127771 None:intergenic 35.0%
CTCACAGTGAAGTAAACTTA+GGG - chr7_4:42127799-42127818 None:intergenic 35.0%
CTAAGTTTACTTCACTGTGA+GGG + chr7_4:42127798-42127817 Msa1154600:intron 35.0%
AACGAAGAAACTAATGGCAA+GGG - chr7_4:42127940-42127959 None:intergenic 35.0%
AAACGAAGAAACTAATGGCA+AGG - chr7_4:42127941-42127960 None:intergenic 35.0%
AAATTAATCAAAGTGGGCGA+GGG - chr7_4:42127993-42128012 None:intergenic 35.0%
AAAATTAATCAAAGTGGGCG+AGG - chr7_4:42127994-42128013 None:intergenic 35.0%
! TCCAATCTAAGATTGCAGTT+TGG + chr7_4:42128122-42128141 Msa1154600:intron 35.0%
TCCAAACTGCAATCTTAGAT+TGG - chr7_4:42128126-42128145 None:intergenic 35.0%
! AATCTAAGATTGCAGTTTGG+AGG + chr7_4:42128125-42128144 Msa1154600:intron 35.0%
! ATCTAAGATTGCAGTTTGGA+GGG + chr7_4:42128126-42128145 Msa1154600:intron 35.0%
AAGAAATACCACTGAAGTTG+TGG + chr7_4:42128295-42128314 Msa1154600:intron 35.0%
AGAAATACCACTGAAGTTGT+GGG + chr7_4:42128296-42128315 Msa1154600:intron 35.0%
! TGTTTGCAGCTGATTTCATT+TGG - chr7_4:42128347-42128366 None:intergenic 35.0%
! TATTTTCTCAACGACTTTGC+AGG + chr7_4:42128728-42128747 Msa1154600:intron 35.0%
ATTGTGTGATGACACAACAA+TGG - chr7_4:42128821-42128840 None:intergenic 35.0%
GGTTGTTCATTGTACATGTA+TGG + chr7_4:42128847-42128866 Msa1154600:CDS 35.0%
TTAATTGCATCGTGTTCAGA+AGG + chr7_4:42129021-42129040 Msa1154600:CDS 35.0%
! AAAATCTAGGGCATAAGGAA+AGG + chr7_4:42129154-42129173 Msa1154600:intron 35.0%
! AAATCTAGGGCATAAGGAAA+GGG + chr7_4:42129155-42129174 Msa1154600:intron 35.0%
! TTTTACTTAGAAGCAGCTAG+AGG + chr7_4:42129317-42129336 Msa1154600:intron 35.0%
! AAATCTAGGGCATAAGGAAA+GGG - chr7_4:42129155-42129174 None:intergenic 35.0%
! AAAATCTAGGGCATAAGGAA+AGG - chr7_4:42129154-42129173 None:intergenic 35.0%
!!! AGAGCATTTATTTTAGGGAG+CGG - chr7_4:42129564-42129583 None:intergenic 35.0%
!!! GCTCTGTTTTTTACTTTCAC+TGG + chr7_4:42129579-42129598 Msa1154600:intron 35.0%
! CTGAATTTGGAATCGATGAT+AGG - chr7_4:42129680-42129699 None:intergenic 35.0%
!! CTATCATCGATTCCAAATTC+AGG + chr7_4:42129678-42129697 Msa1154600:intron 35.0%
! ATCGATTCCAAATTCAGGAA+CGG + chr7_4:42129683-42129702 Msa1154600:intron 35.0%
ATTCTTTGGCATGGAAAAAC+CGG + chr7_4:42129711-42129730 Msa1154600:CDS 35.0%
! CTTTTTAACAAGTGCCCTAA+GGG - chr7_4:42129894-42129913 None:intergenic 35.0%
! AATGCAGGAGAACATTTTCA+AGG - chr7_4:42130274-42130293 None:intergenic 35.0%
AGTTTCGGTTCCAATAGAAT+AGG - chr7_4:42130393-42130412 None:intergenic 35.0%
GCAGCATTATCTAAATTTGG+TGG - chr7_4:42130450-42130469 None:intergenic 35.0%
! TGTTTAATGTCTTTCAGGTC+TGG + chr7_4:42130578-42130597 Msa1154600:intron 35.0%
! GTTTAATGTCTTTCAGGTCT+GGG + chr7_4:42130579-42130598 Msa1154600:intron 35.0%
CTGGGAGATTGTATATTCAA+AGG + chr7_4:42130597-42130616 Msa1154600:CDS 35.0%
CAAATGTTATGCAGCTTAAG+GGG + chr7_4:42130641-42130660 Msa1154600:CDS 35.0%
!!! AATTTTTCTGGGACACTTGT+CGG - chr7_4:42131069-42131088 None:intergenic 35.0%
GAAGTAGTGATGATCAATGA+TGG + chr7_4:42131163-42131182 Msa1154600:intron 35.0%
AGTAGTGATGATCAATGATG+GGG + chr7_4:42131165-42131184 Msa1154600:intron 35.0%
TAGCTCTTCAGTTAAGTAGA+CGG + chr7_4:42131218-42131237 Msa1154600:intron 35.0%
CTAGGGTTTGAATGATCAAA+TGG + chr7_4:42131533-42131552 Msa1154600:intron 35.0%
!! GAGCTTTTAGAAAAGGGTTT+TGG + chr7_4:42131582-42131601 Msa1154600:intron 35.0%
!!! TTAGAAAAGGGTTTTGGATG+AGG + chr7_4:42131588-42131607 Msa1154600:intron 35.0%
!!! TAGAAAAGGGTTTTGGATGA+GGG + chr7_4:42131589-42131608 Msa1154600:intron 35.0%
!! AGGAAGTGTTATAACATGAC+TGG + chr7_4:42131732-42131751 Msa1154600:intron 35.0%
AACATACTCCTTTCTTCATG+AGG + chr7_4:42132120-42132139 Msa1154600:intron 35.0%
AATGAAGACCTCATGAAGAA+AGG - chr7_4:42132131-42132150 None:intergenic 35.0%
GTGATTATTTGCTCAGAGTT+TGG - chr7_4:42132232-42132251 None:intergenic 35.0%
! GCCAGTGAAAATAAGTATTG+TGG - chr7_4:42132455-42132474 None:intergenic 35.0%
TCTTGAAGTTCGCTATCATA+TGG + chr7_4:42132640-42132659 Msa1154600:intron 35.0%
TGATTATTTCCTTCACTTGC+AGG + chr7_4:42132939-42132958 Msa1154600:intron 35.0%
TTACCCATAGGAATAGCTTT+AGG - chr7_4:42132990-42133009 None:intergenic 35.0%
CAAACTACATGAACCAGATT+TGG - chr7_4:42133162-42133181 None:intergenic 35.0%
TGCAGGAAATGAAAAAGTCT+TGG + chr7_4:42133376-42133395 Msa1154600:intron 35.0%
GTGACAAGAAAGTGAAATTG+TGG + chr7_4:42133417-42133436 Msa1154600:CDS 35.0%
!! ACAAACATAGATGGTGTTGT+TGG + chr7_4:42133686-42133705 Msa1154600:three_prime_UTR 35.0%
TTATTTACTGTACCATGGTG+AGG + chr7_4:42133857-42133876 Msa1154600:three_prime_UTR 35.0%
TATTTACTGTACCATGGTGA+GGG + chr7_4:42133858-42133877 Msa1154600:three_prime_UTR 35.0%
! GTTTTATATGAGGTGGACGA+TGG - chr7_4:42125440-42125459 None:intergenic 40.0%
!! AAATGGCGGGGTTTTATATG+AGG - chr7_4:42125450-42125469 None:intergenic 40.0%
TAGGTGAAAATGCAAATGGC+GGG - chr7_4:42125463-42125482 None:intergenic 40.0%
GAAGAGAAAACGCAACAATG+GGG - chr7_4:42125534-42125553 None:intergenic 40.0%
! GTTGCGTTTTCTCTTCTTCT+CGG + chr7_4:42125538-42125557 Msa1154600:CDS 40.0%
GATTGAGATTTGCGATGGAT+CGG - chr7_4:42125621-42125640 None:intergenic 40.0%
ATTGGGTTTGGATTCGGATT+TGG - chr7_4:42125643-42125662 None:intergenic 40.0%
!!! TTCGGAAGTGGTTTTGAAGA+TGG - chr7_4:42125670-42125689 None:intergenic 40.0%
! TTTAGGGTGTTTGTGGAAAC+TGG + chr7_4:42125932-42125951 Msa1154600:intron 40.0%
!!! TACTGAGAGTTTTAGAGAGG+AGG + chr7_4:42126012-42126031 Msa1154600:intron 40.0%
AAGGAGAGTAGATTAGATGG+AGG + chr7_4:42126190-42126209 Msa1154600:intron 40.0%
AGGAGAGTAGATTAGATGGA+GGG + chr7_4:42126191-42126210 Msa1154600:intron 40.0%
GAGGGTAGTTAAATCACTAG+AGG + chr7_4:42126209-42126228 Msa1154600:intron 40.0%
TTTATCCCACTAAGTGGAGT+AGG - chr7_4:42126330-42126349 None:intergenic 40.0%
AGCTATGGATCATGCATTTC+AGG + chr7_4:42126563-42126582 Msa1154600:intron 40.0%
AAGTACTACAACCGGATTTC+AGG - chr7_4:42126714-42126733 None:intergenic 40.0%
CGAAAACAGCGTAAGTTATG+AGG - chr7_4:42126747-42126766 None:intergenic 40.0%
!! TGCTCCTTTGGTAACTTTTG+TGG + chr7_4:42126771-42126790 Msa1154600:intron 40.0%
! AGAGATGGAAAAGAGGTACA+AGG - chr7_4:42126864-42126883 None:intergenic 40.0%
GTAGCTCAATTGCATAGGTT+GGG - chr7_4:42127138-42127157 None:intergenic 40.0%
AGTAGCTCAATTGCATAGGT+TGG - chr7_4:42127139-42127158 None:intergenic 40.0%
AAGGAGTAGCTCAATTGCAT+AGG - chr7_4:42127143-42127162 None:intergenic 40.0%
ATGCAATTGAGCTACTCCTT+CGG + chr7_4:42127143-42127162 Msa1154600:intron 40.0%
!! AGGGTTTTGGCAACATTAGT+TGG + chr7_4:42127176-42127195 Msa1154600:intron 40.0%
TTGAATACCTTGAAAGGCCA+TGG + chr7_4:42127566-42127585 Msa1154600:CDS 40.0%
CCTCACAGTGAAGTAAACTT+AGG - chr7_4:42127800-42127819 None:intergenic 40.0%
CCTAAGTTTACTTCACTGTG+AGG + chr7_4:42127797-42127816 Msa1154600:intron 40.0%
AGTTGTGTCTGATGTTGTGT+TGG + chr7_4:42127825-42127844 Msa1154600:intron 40.0%
CTGTAAGAGGGCAGATTAAA+GGG - chr7_4:42127902-42127921 None:intergenic 40.0%
ACTGTAAGAGGGCAGATTAA+AGG - chr7_4:42127903-42127922 None:intergenic 40.0%
GCATGAGATACACTGTAAGA+GGG - chr7_4:42127914-42127933 None:intergenic 40.0%
AGCATGAGATACACTGTAAG+AGG - chr7_4:42127915-42127934 None:intergenic 40.0%
ACGAAGAAACTAATGGCAAG+GGG - chr7_4:42127939-42127958 None:intergenic 40.0%
TGTTCCAGTTCAAGGTGAAT+CGG - chr7_4:42128091-42128110 None:intergenic 40.0%
! TCTAAGATTGCAGTTTGGAG+GGG + chr7_4:42128127-42128146 Msa1154600:intron 40.0%
GTATAATTTCTCGTAGGCAG+AGG - chr7_4:42128204-42128223 None:intergenic 40.0%
!! AGTGGTGAGAGTATTCAAGT+TGG + chr7_4:42128604-42128623 Msa1154600:CDS 40.0%
!! CACAGAATTAATTTGCCTCC+TGG + chr7_4:42128754-42128773 Msa1154600:CDS 40.0%
!! AGAATTAATTTGCCTCCTGG+AGG + chr7_4:42128757-42128776 Msa1154600:CDS 40.0%
TCAGCAAATGCAATTGCAGT+TGG - chr7_4:42128787-42128806 None:intergenic 40.0%
! GGAGAAAGAATGGCTTGTAT+TGG - chr7_4:42129230-42129249 None:intergenic 40.0%
AGTAGCTAGAGGAGAAAGAA+TGG - chr7_4:42129240-42129259 None:intergenic 40.0%
GGAGAAAGAATGGTCTGTAT+TGG + chr7_4:42129338-42129357 Msa1154600:intron 40.0%
ATGATGTCCGTTCCTGAATT+TGG - chr7_4:42129693-42129712 None:intergenic 40.0%
TTCTTTGGCATGGAAAAACC+GGG + chr7_4:42129712-42129731 Msa1154600:CDS 40.0%
ATGGCTACTATATCACCCAA+TGG + chr7_4:42129777-42129796 Msa1154600:CDS 40.0%
AAATGCTAACAAGTGCCCTT+AGG + chr7_4:42129876-42129895 Msa1154600:intron 40.0%
AATGCTAACAAGTGCCCTTA+GGG + chr7_4:42129877-42129896 Msa1154600:intron 40.0%
! GCTTTTTAACAAGTGCCCTA+AGG - chr7_4:42129895-42129914 None:intergenic 40.0%
AACCTGAGCTAGTAAAAGAC+GGG - chr7_4:42130174-42130193 None:intergenic 40.0%
CAACCTGAGCTAGTAAAAGA+CGG - chr7_4:42130175-42130194 None:intergenic 40.0%
! CAGTTTTCGGTGGCATAAAT+AGG - chr7_4:42130524-42130543 None:intergenic 40.0%
! AACAGTGAATCAGTTTTCGG+TGG - chr7_4:42130534-42130553 None:intergenic 40.0%
TCTTACCCTGTACAAAAGTG+AGG + chr7_4:42130905-42130924 Msa1154600:intron 40.0%
AAGAATATAGGACACCGACA+CGG - chr7_4:42131412-42131431 None:intergenic 40.0%
GATCAAATGGTTGCATTTGG+AGG + chr7_4:42131546-42131565 Msa1154600:intron 40.0%
! TGTCTCCCTTGTATTTTCCA+TGG - chr7_4:42131860-42131879 None:intergenic 40.0%
ATGCCAGAATCTTCTTTCCA+TGG + chr7_4:42131926-42131945 Msa1154600:intron 40.0%
CTTCCATGGAAAGAAGATTC+TGG - chr7_4:42131932-42131951 None:intergenic 40.0%
CAATGTCACTGTGTGAAGAA+AGG - chr7_4:42132063-42132082 None:intergenic 40.0%
GCAAATAATCACTGCATCCA+AGG + chr7_4:42132240-42132259 Msa1154600:CDS 40.0%
ATAATCACTGCATCCAAGGA+CGG + chr7_4:42132244-42132263 Msa1154600:CDS 40.0%
TATTCTTAAGGAACCGTCCT+TGG - chr7_4:42132260-42132279 None:intergenic 40.0%
AGGACGGTTCCTTAAGAATA+TGG + chr7_4:42132260-42132279 Msa1154600:CDS 40.0%
GAATTCTTCATTAGCACTGC+AGG - chr7_4:42132377-42132396 None:intergenic 40.0%
TAATTCATTTGTGCCACCTG+AGG + chr7_4:42132568-42132587 Msa1154600:intron 40.0%
AATTCATTTGTGCCACCTGA+GGG + chr7_4:42132569-42132588 Msa1154600:intron 40.0%
AATTAATAACCCATCCCCTC+AGG - chr7_4:42132587-42132606 None:intergenic 40.0%
AGTTCGCTATCATATGGATG+AGG + chr7_4:42132646-42132665 Msa1154600:intron 40.0%
TAGAGTCACGAAGAGGAATT+GGG - chr7_4:42132694-42132713 None:intergenic 40.0%
TTCCATCAGGTGAAATACTG+AGG - chr7_4:42132742-42132761 None:intergenic 40.0%
TTCACCTGATGGAAAGATTC+TGG + chr7_4:42132748-42132767 Msa1154600:CDS 40.0%
! CATACCATCATGGGCTTTTT+CGG - chr7_4:42132837-42132856 None:intergenic 40.0%
ATTCTTGGGCATACCATCAT+GGG - chr7_4:42132846-42132865 None:intergenic 40.0%
CAATGAGTTAAGGTCGCAAA+TGG - chr7_4:42132921-42132940 None:intergenic 40.0%
! ATAAGGACAATTTTGAGCCG+TGG + chr7_4:42133109-42133128 Msa1154600:intron 40.0%
! TAAGGACAATTTTGAGCCGT+GGG + chr7_4:42133110-42133129 Msa1154600:intron 40.0%
ATTTGAACAGATCCTACCCA+CGG - chr7_4:42133129-42133148 None:intergenic 40.0%
CATTCTAGGCATGATTGTGA+TGG - chr7_4:42133272-42133291 None:intergenic 40.0%
! TAAACACTGTTGCCTTTTGC+AGG + chr7_4:42133359-42133378 Msa1154600:intron 40.0%
TAGTTGTCAGCAGTAGCATA+TGG - chr7_4:42133470-42133489 None:intergenic 40.0%
ACAAAAGCTGCACTGTATCA+TGG + chr7_4:42133562-42133581 Msa1154600:three_prime_UTR 40.0%
AGAGTCAAAGCAGCAACATA+AGG - chr7_4:42133633-42133652 None:intergenic 40.0%
AAAGAGCAGGATTGTACACG+TGG - chr7_4:42125414-42125433 None:intergenic 45.0%
AGGTGAAAATGCAAATGGCG+GGG - chr7_4:42125462-42125481 None:intergenic 45.0%
GGACTTCGGATTGACGTTTA+CGG - chr7_4:42125600-42125619 None:intergenic 45.0%
ATTTGCGATGGATCGGACTT+CGG - chr7_4:42125614-42125633 None:intergenic 45.0%
!!! GTTTTGAAGATGGCGCGATT+GGG - chr7_4:42125660-42125679 None:intergenic 45.0%
CGTTAGATGTGTGGTAAGAC+TGG + chr7_4:42126041-42126060 Msa1154600:intron 45.0%
TAAACTTGGCGTAGGTGGTT+TGG + chr7_4:42126134-42126153 Msa1154600:intron 45.0%
AAACTTGGCGTAGGTGGTTT+GGG + chr7_4:42126135-42126154 Msa1154600:intron 45.0%
ATCACTAGAGGAAGAGGAAG+AGG + chr7_4:42126221-42126240 Msa1154600:intron 45.0%
GAAGAGGAAGAGGAAGACTA+AGG + chr7_4:42126231-42126250 Msa1154600:intron 45.0%
ACTAAGTGGAGTAGGCTACA+TGG - chr7_4:42126322-42126341 None:intergenic 45.0%
ATGTAGCCTACTCCACTTAG+TGG + chr7_4:42126321-42126340 Msa1154600:intron 45.0%
TGTAGCCTACTCCACTTAGT+GGG + chr7_4:42126322-42126341 Msa1154600:intron 45.0%
! CCAAGCTTTATCCCACTAAG+TGG - chr7_4:42126336-42126355 None:intergenic 45.0%
CCACTTAGTGGGATAAAGCT+TGG + chr7_4:42126333-42126352 Msa1154600:intron 45.0%
CAGGTTCAAAAACTTAGGGC+CGG + chr7_4:42126416-42126435 Msa1154600:intron 45.0%
!! TGTTTTCGGGATTGCTCCTT+TGG + chr7_4:42126759-42126778 Msa1154600:intron 45.0%
GGCACAAAGAGATGGAAAAG+AGG - chr7_4:42126871-42126890 None:intergenic 45.0%
TCTAGCAAGGCACAAAGAGA+TGG - chr7_4:42126879-42126898 None:intergenic 45.0%
CTTTGTGCCTTGCTAGAGTT+TGG + chr7_4:42126882-42126901 Msa1154600:intron 45.0%
! CGAGCCCAACTTTTCCTTTT+AGG + chr7_4:42126992-42127011 Msa1154600:intron 45.0%
GAGGGAATTTGTGAGTAGCA+AGG + chr7_4:42127071-42127090 Msa1154600:intron 45.0%
TGAGTAGCAAGGATCGAACT+TGG + chr7_4:42127082-42127101 Msa1154600:intron 45.0%
GAGTAGCAAGGATCGAACTT+GGG + chr7_4:42127083-42127102 Msa1154600:intron 45.0%
! ACTCCTTCGGAGACCTTTTT+AGG + chr7_4:42127156-42127175 Msa1154600:intron 45.0%
! CTCCTTCGGAGACCTTTTTA+GGG + chr7_4:42127157-42127176 Msa1154600:intron 45.0%
AACCCTAAAAAGGTCTCCGA+AGG - chr7_4:42127162-42127181 None:intergenic 45.0%
!!! CGGAGACCTTTTTAGGGTTT+TGG + chr7_4:42127163-42127182 Msa1154600:intron 45.0%
GGGATATGTTTCTCTCCTGA+TGG + chr7_4:42127602-42127621 Msa1154600:CDS 45.0%
! CTCTCCTGATGGACGAAATT+TGG + chr7_4:42127613-42127632 Msa1154600:CDS 45.0%
GTTGCCAAATTTCGTCCATC+AGG - chr7_4:42127620-42127639 None:intergenic 45.0%
GATGGACGAAATTTGGCAAC+AGG + chr7_4:42127620-42127639 Msa1154600:CDS 45.0%
CGAAGAAACTAATGGCAAGG+GGG - chr7_4:42127938-42127957 None:intergenic 45.0%
! AGGTGAATCGGCTTTGTGTA+GGG - chr7_4:42128079-42128098 None:intergenic 45.0%
! AAGGTGAATCGGCTTTGTGT+AGG - chr7_4:42128080-42128099 None:intergenic 45.0%
! AAAGCCGATTCACCTTGAAC+TGG + chr7_4:42128084-42128103 Msa1154600:intron 45.0%
TGGATGCATGTTCCAGTTCA+AGG - chr7_4:42128099-42128118 None:intergenic 45.0%
CTAAGATTGCAGTTTGGAGG+GGG + chr7_4:42128128-42128147 Msa1154600:intron 45.0%
TAAGATTGCAGTTTGGAGGG+GGG + chr7_4:42128129-42128148 Msa1154600:intron 45.0%
ACCACTGAAGTTGTGGGAAT+CGG + chr7_4:42128302-42128321 Msa1154600:intron 45.0%
GGAATCGGGAAAACCACTAA+AGG + chr7_4:42128317-42128336 Msa1154600:intron 45.0%
!! TTCATTTGGCTGGCCTTTAG+TGG - chr7_4:42128333-42128352 None:intergenic 45.0%
! TGCAGCTGATTTCATTTGGC+TGG - chr7_4:42128343-42128362 None:intergenic 45.0%
CGTGTAGACTTCTCTGAGTA+TGG + chr7_4:42128450-42128469 Msa1154600:intron 45.0%
GACTTCTCTGAGTATGGCAT+AGG + chr7_4:42128456-42128475 Msa1154600:intron 45.0%
TGAGTATGGCATAGGACTTC+TGG + chr7_4:42128464-42128483 Msa1154600:intron 45.0%
GAGTATGGCATAGGACTTCT+GGG + chr7_4:42128465-42128484 Msa1154600:intron 45.0%
!! GGTGAGAGTATTCAAGTTGG+AGG + chr7_4:42128607-42128626 Msa1154600:CDS 45.0%
GCAAATGCAATTGCAGTTGG+AGG - chr7_4:42128784-42128803 None:intergenic 45.0%
GTGTGATGACACAACAATGG+AGG - chr7_4:42128818-42128837 None:intergenic 45.0%
GTGTCATCACACAATCTCAC+TGG + chr7_4:42128826-42128845 Msa1154600:CDS 45.0%
GATGTTCCCACTTAATCTCC+GGG - chr7_4:42128924-42128943 None:intergenic 45.0%
CGATGTTCCCACTTAATCTC+CGG - chr7_4:42128925-42128944 None:intergenic 45.0%
ATCAGCACTGCCATAAGTAG+CGG - chr7_4:42128992-42129011 None:intergenic 45.0%
AGCAGCTAGAGGAGAAAGAA+TGG + chr7_4:42129328-42129347 Msa1154600:intron 45.0%
CAGGAACGGACATCATTCTT+TGG + chr7_4:42129697-42129716 Msa1154600:intron 45.0%
ACGGACATCATTCTTTGGCA+TGG + chr7_4:42129702-42129721 Msa1154600:CDS 45.0%
TGGAAAAACCGGGAAGAGTT+TGG + chr7_4:42129722-42129741 Msa1154600:CDS 45.0%
GGAAAAACCGGGAAGAGTTT+GGG + chr7_4:42129723-42129742 Msa1154600:CDS 45.0%
GAAAAACCGGGAAGAGTTTG+GGG + chr7_4:42129724-42129743 Msa1154600:CDS 45.0%
GCTGCAATGAAACGTCCATT+GGG - chr7_4:42129795-42129814 None:intergenic 45.0%
AGCTGCAATGAAACGTCCAT+TGG - chr7_4:42129796-42129815 None:intergenic 45.0%
AATCCTTAGCAAGTGCCCTT+AGG + chr7_4:42130014-42130033 Msa1154600:intron 45.0%
ATCCTTAGCAAGTGCCCTTA+GGG + chr7_4:42130015-42130034 Msa1154600:intron 45.0%
CATGCTAACAAGTGCCCTAA+GGG - chr7_4:42130032-42130051 None:intergenic 45.0%
TCATGCTAACAAGTGCCCTA+AGG - chr7_4:42130033-42130052 None:intergenic 45.0%
ATGCGCATCTGGTATGCAAT+AGG + chr7_4:42130126-42130145 Msa1154600:intron 45.0%
GCATCTGGTATGCAATAGGA+TGG + chr7_4:42130130-42130149 Msa1154600:intron 45.0%
TGCAATAGGATGGAGCCTTT+AGG + chr7_4:42130140-42130159 Msa1154600:intron 45.0%
! TATGCAGCTTAAGGGGCATA+AGG + chr7_4:42130648-42130667 Msa1154600:CDS 45.0%
TACCCTGTACAAAAGTGAGG+TGG + chr7_4:42130908-42130927 Msa1154600:intron 45.0%
ACCCTGTACAAAAGTGAGGT+GGG + chr7_4:42130909-42130928 Msa1154600:intron 45.0%
!! TCCCACCTCACTTTTGTACA+GGG - chr7_4:42130913-42130932 None:intergenic 45.0%
!! ATCCCACCTCACTTTTGTAC+AGG - chr7_4:42130914-42130933 None:intergenic 45.0%
!! GCTTCACTACCTCTGAAGTA+CGG + chr7_4:42131013-42131032 Msa1154600:intron 45.0%
ACACCTCTCGAACACTTCTA+TGG + chr7_4:42131124-42131143 Msa1154600:intron 45.0%
CACCTCTCGAACACTTCTAT+GGG + chr7_4:42131125-42131144 Msa1154600:intron 45.0%
! GATGATCAATGATGGGGATG+TGG + chr7_4:42131171-42131190 Msa1154600:intron 45.0%
CCATAACCAAGTTAGCGTGA+CGG - chr7_4:42131477-42131496 None:intergenic 45.0%
CGTCACGCTAACTTGGTTAT+GGG + chr7_4:42131475-42131494 Msa1154600:intron 45.0%
!!! TTTTGGATGAGGGTGTTTGG+AGG + chr7_4:42131599-42131618 Msa1154600:intron 45.0%
! TGGAGGCATAAAAACTGCCA+AGG + chr7_4:42131616-42131635 Msa1154600:intron 45.0%
GGCTTCTGACCAAAGTATGA+AGG + chr7_4:42131664-42131683 Msa1154600:intron 45.0%
!! TTGTTCAGAGTGCTGTGACT+TGG + chr7_4:42132194-42132213 Msa1154600:intron 45.0%
CATTAGCACTGCAGGTTACT+GGG - chr7_4:42132369-42132388 None:intergenic 45.0%
TCATTAGCACTGCAGGTTAC+TGG - chr7_4:42132370-42132389 None:intergenic 45.0%
TTAATATGTCCTCTCCCTCG+TGG + chr7_4:42132507-42132526 Msa1154600:intron 45.0%
TAATATGTCCTCTCCCTCGT+GGG + chr7_4:42132508-42132527 Msa1154600:intron 45.0%
ATTCATTTGTGCCACCTGAG+GGG + chr7_4:42132570-42132589 Msa1154600:intron 45.0%
ACAGAGACAAGTACAGTGAG+AGG - chr7_4:42132619-42132638 None:intergenic 45.0%
TGAGGATCCAAAGACACTGA+AGG + chr7_4:42132664-42132683 Msa1154600:CDS 45.0%
GTAGAGTCACGAAGAGGAAT+TGG - chr7_4:42132695-42132714 None:intergenic 45.0%
ATTCCTCTTCGTGACTCTAC+TGG + chr7_4:42132695-42132714 Msa1154600:CDS 45.0%
GACACTTAACCACTGCAATG+TGG - chr7_4:42132789-42132808 None:intergenic 45.0%
!! GTTAAGTGTCGAGACTGGAA+AGG + chr7_4:42132799-42132818 Msa1154600:CDS 45.0%
! TGTCGAGACTGGAAAGGTTT+TGG + chr7_4:42132805-42132824 Msa1154600:CDS 45.0%
GATTCTTGGGCATACCATCA+TGG - chr7_4:42132847-42132866 None:intergenic 45.0%
! CGACATTACAGGCATTGCAT+GGG + chr7_4:42132962-42132981 Msa1154600:CDS 45.0%
! GACATTACAGGCATTGCATG+GGG + chr7_4:42132963-42132982 Msa1154600:CDS 45.0%
! ACATTACAGGCATTGCATGG+GGG + chr7_4:42132964-42132983 Msa1154600:CDS 45.0%
GGGCCTAAAGCTATTCCTAT+GGG + chr7_4:42132984-42133003 Msa1154600:CDS 45.0%
! AGAGGTGTGCGATACATTCT+AGG - chr7_4:42133286-42133305 None:intergenic 45.0%
!!! TTGGTTTTAGCGACAGCTAG+TGG + chr7_4:42133395-42133414 Msa1154600:CDS 45.0%
!!! TATAATTCTATTTAATTTAT+GGG + chr7_4:42129853-42129872 Msa1154600:intron 5.0%
!! TATATTAAATATATATGTAT+TGG + chr7_4:42131381-42131400 Msa1154600:intron 5.0%
TGGACGATGGAAGAAAGAGC+AGG - chr7_4:42125427-42125446 None:intergenic 50.0%
!! TGGCGGGGTTTTATATGAGG+TGG - chr7_4:42125447-42125466 None:intergenic 50.0%
!!! GGTTTTGAAGATGGCGCGAT+TGG - chr7_4:42125661-42125680 None:intergenic 50.0%
AGGATGCTGCGTTAGATGTG+TGG + chr7_4:42126032-42126051 Msa1154600:intron 50.0%
AGACGGTGTAAACTTGGCGT+AGG + chr7_4:42126126-42126145 Msa1154600:intron 50.0%
TTTCAGGCCCATAGCTAGCA+AGG - chr7_4:42126698-42126717 None:intergenic 50.0%
CTAGCTATGGGCCTGAAATC+CGG + chr7_4:42126700-42126719 Msa1154600:intron 50.0%
TGTATTATGCGGGTGGGTGT+TGG + chr7_4:42127349-42127368 Msa1154600:intron 50.0%
!! GTGGGTGTTGGTGAAGCTTA+AGG + chr7_4:42127361-42127380 Msa1154600:intron 50.0%
AGTCAAGCGGCATCATCCAT+TGG + chr7_4:42127541-42127560 Msa1154600:CDS 50.0%
TGCATCACCATGGCCTTTCA+AGG - chr7_4:42127576-42127595 None:intergenic 50.0%
! GCCATGGTGATGCAGTTACA+GGG + chr7_4:42127582-42127601 Msa1154600:CDS 50.0%
TCCCTGTAACTGCATCACCA+TGG - chr7_4:42127586-42127605 None:intergenic 50.0%
! GTTGGTGCTTCGTAGCCAAT+AGG + chr7_4:42127843-42127862 Msa1154600:intron 50.0%
GAGGGCAGATTAAAGGGAAG+AGG - chr7_4:42127896-42127915 None:intergenic 50.0%
TAATCAAAGTGGGCGAGGGA+GGG - chr7_4:42127989-42128008 None:intergenic 50.0%
TTAATCAAAGTGGGCGAGGG+AGG - chr7_4:42127990-42128009 None:intergenic 50.0%
! TGAATCGGCTTTGTGTAGGG+GGG - chr7_4:42128076-42128095 None:intergenic 50.0%
! GTGAATCGGCTTTGTGTAGG+GGG - chr7_4:42128077-42128096 None:intergenic 50.0%
! GGTGAATCGGCTTTGTGTAG+GGG - chr7_4:42128078-42128097 None:intergenic 50.0%
CCACTGAAGTTGTGGGAATC+GGG + chr7_4:42128303-42128322 Msa1154600:intron 50.0%
GTGCAAACAGCTTGTGCTGA+TGG + chr7_4:42128581-42128600 Msa1154600:intron 50.0%
! AACAGCTTGTGCTGATGGAG+TGG + chr7_4:42128586-42128605 Msa1154600:intron 50.0%
ACAAGCAAAGCTTCCTCTCC+CGG + chr7_4:42128903-42128922 Msa1154600:CDS 50.0%
TTCCTCTCCCGGAGATTAAG+TGG + chr7_4:42128914-42128933 Msa1154600:CDS 50.0%
TCCTCTCCCGGAGATTAAGT+GGG + chr7_4:42128915-42128934 Msa1154600:CDS 50.0%
! TTTGGAGCGTCCGCTACTTA+TGG + chr7_4:42128979-42128998 Msa1154600:CDS 50.0%
! GCTACTTATGGCAGTGCTGA+TGG + chr7_4:42128991-42129010 Msa1154600:CDS 50.0%
AGCGTTCACTGCAGACGTTA+AGG + chr7_4:42129818-42129837 Msa1154600:CDS 50.0%
! CTCCCGTCTTTTACTAGCTC+AGG + chr7_4:42130169-42130188 Msa1154600:intron 50.0%
! GCATTGCTGAGTTGAAGGCA+AGG - chr7_4:42130213-42130232 None:intergenic 50.0%
! CAGTCGCATTGCTGAGTTGA+AGG - chr7_4:42130218-42130237 None:intergenic 50.0%
CAATGCGACTGTGCCACATT+AGG + chr7_4:42130227-42130246 Msa1154600:intron 50.0%
!! AAGTGTTCGAGAGGTGTCGA+AGG - chr7_4:42131121-42131140 None:intergenic 50.0%
!! CTCCCATAGAAGTGTTCGAG+AGG - chr7_4:42131130-42131149 None:intergenic 50.0%
!! ATGTATTGGTGTCGCCGTGT+CGG + chr7_4:42131395-42131414 Msa1154600:intron 50.0%
CACTAACCGTCACGCTAACT+TGG + chr7_4:42131468-42131487 Msa1154600:intron 50.0%
CCGTCACGCTAACTTGGTTA+TGG + chr7_4:42131474-42131493 Msa1154600:intron 50.0%
!!! GGGTTTTGGATGAGGGTGTT+TGG + chr7_4:42131596-42131615 Msa1154600:intron 50.0%
TAATAACCCATCCCCTCAGG+TGG - chr7_4:42132584-42132603 None:intergenic 50.0%
GGGAACACCTTCAGTGTCTT+TGG - chr7_4:42132674-42132693 None:intergenic 50.0%
GTACCAGTAGAGTCACGAAG+AGG - chr7_4:42132701-42132720 None:intergenic 50.0%
CGCCTCAGTATTTCACCTGA+TGG + chr7_4:42132737-42132756 Msa1154600:CDS 50.0%
GCAGCCAGAATCTTTCCATC+AGG - chr7_4:42132755-42132774 None:intergenic 50.0%
! AAGATTCTGGCTGCAACCCA+TGG + chr7_4:42132761-42132780 Msa1154600:CDS 50.0%
CCACTGCAATGTGGAACCAT+GGG - chr7_4:42132780-42132799 None:intergenic 50.0%
ACCACTGCAATGTGGAACCA+TGG - chr7_4:42132781-42132800 None:intergenic 50.0%
!! CAGTGGTTAAGTGTCGAGAC+TGG + chr7_4:42132794-42132813 Msa1154600:CDS 50.0%
ACAGCCGAAAAAGCCCATGA+TGG + chr7_4:42132830-42132849 Msa1154600:CDS 50.0%
GTAATGTCGCCTGCAAGTGA+AGG - chr7_4:42132951-42132970 None:intergenic 50.0%
TCACTTGCAGGCGACATTAC+AGG + chr7_4:42132951-42132970 Msa1154600:intron 50.0%
! GCGACATTACAGGCATTGCA+TGG + chr7_4:42132961-42132980 Msa1154600:CDS 50.0%
GGGGCCTAAAGCTATTCCTA+TGG + chr7_4:42132983-42133002 Msa1154600:CDS 50.0%
! GACAATTTTGAGCCGTGGGT+AGG + chr7_4:42133114-42133133 Msa1154600:intron 50.0%
GGTGCACTAGTAGTTCACGA+TGG - chr7_4:42133449-42133468 None:intergenic 50.0%
GGCGCGATTGGGTTTGGATT+CGG - chr7_4:42125649-42125668 None:intergenic 55.0%
GAAGATGGCGCGATTGGGTT+TGG - chr7_4:42125655-42125674 None:intergenic 55.0%
CGGTGTAAACTTGGCGTAGG+TGG + chr7_4:42126129-42126148 Msa1154600:intron 55.0%
! GGCCATGGTGATGCAGTTAC+AGG + chr7_4:42127581-42127600 Msa1154600:CDS 55.0%
TTTGTGTAGGGGGGGAGGAA+GGG - chr7_4:42128067-42128086 None:intergenic 55.0%
! GAATCGGCTTTGTGTAGGGG+GGG - chr7_4:42128075-42128094 None:intergenic 55.0%
CCCGATTCCCACAACTTCAG+TGG - chr7_4:42128306-42128325 None:intergenic 55.0%
ATTGCAGTTGGAGGACCTCC+AGG - chr7_4:42128775-42128794 None:intergenic 55.0%
TCCCACTTAATCTCCGGGAG+AGG - chr7_4:42128919-42128938 None:intergenic 55.0%
CACATGCCCCAAACTCTTCC+CGG - chr7_4:42129733-42129752 None:intergenic 55.0%
!! TGCCCTAAGGGCACTTGCTA+AGG - chr7_4:42130020-42130039 None:intergenic 55.0%
AGACGGGAGAGTCAGCCTAA+AGG - chr7_4:42130158-42130177 None:intergenic 55.0%
GAGGTAGTGAAGCTCTCTCC+AGG - chr7_4:42131006-42131025 None:intergenic 55.0%
!! CAGAGGTGTCCGTACTTCAG+AGG - chr7_4:42131025-42131044 None:intergenic 55.0%
!! CTCTGAAGTACGGACACCTC+TGG + chr7_4:42131023-42131042 Msa1154600:intron 55.0%
GTACGGACACCTCTGGCATT+AGG + chr7_4:42131030-42131049 Msa1154600:intron 55.0%
AGCACTGCAGGTTACTGGGT+GGG - chr7_4:42132365-42132384 None:intergenic 55.0%
TAGCACTGCAGGTTACTGGG+TGG - chr7_4:42132366-42132385 None:intergenic 55.0%
ATTTGTGCCACCTGAGGGGA+TGG + chr7_4:42132574-42132593 Msa1154600:intron 55.0%
TTTGTGCCACCTGAGGGGAT+GGG + chr7_4:42132575-42132594 Msa1154600:intron 55.0%
CCCATGGTTCCACATTGCAG+TGG + chr7_4:42132777-42132796 Msa1154600:CDS 55.0%
TTGTGTAGGGGGGGAGGAAG+GGG - chr7_4:42128066-42128085 None:intergenic 60.0%
CTTTGTGTAGGGGGGGAGGA+AGG - chr7_4:42128068-42128087 None:intergenic 60.0%
! CGGGAAGAGTTTGGGGCATG+TGG + chr7_4:42129731-42129750 Msa1154600:CDS 60.0%
CAGCTAGTCGCATGCGCATC+TGG + chr7_4:42130115-42130134 Msa1154600:intron 60.0%
CAGGACACGCCTAATGCCAG+AGG - chr7_4:42131042-42131061 None:intergenic 60.0%
CTCTGGCATTAGGCGTGTCC+TGG + chr7_4:42131040-42131059 Msa1154600:intron 60.0%
TGGGACACTTGTCGGACACC+AGG - chr7_4:42131061-42131080 None:intergenic 60.0%
GCAGGTTACTGGGTGGGCAT+GGG - chr7_4:42132359-42132378 None:intergenic 60.0%
TGCAGGTTACTGGGTGGGCA+TGG - chr7_4:42132360-42132379 None:intergenic 60.0%
TCCTCTCCCTCGTGGGATTG+AGG + chr7_4:42132515-42132534 Msa1154600:intron 60.0%
TCCCTCGTGGGATTGAGGCA+AGG + chr7_4:42132520-42132539 Msa1154600:intron 60.0%
CCCTTGCCTCAATCCCACGA+GGG - chr7_4:42132524-42132543 None:intergenic 60.0%
CCCTCGTGGGATTGAGGCAA+GGG + chr7_4:42132521-42132540 Msa1154600:intron 60.0%
ACCCTTGCCTCAATCCCACG+AGG - chr7_4:42132525-42132544 None:intergenic 60.0%
TGTGTAGGGGGGGAGGAAGG+GGG - chr7_4:42128065-42128084 None:intergenic 65.0%
! TCGGCTTTGTGTAGGGGGGG+AGG - chr7_4:42128072-42128091 None:intergenic 65.0%
GCAGTTGGAGGACCTCCAGG+AGG - chr7_4:42128772-42128791 None:intergenic 65.0%
GCCTCAATCCCACGAGGGAG+AGG - chr7_4:42132519-42132538 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 42125351 42133881 42125351 ID=Msa1154600;Name=Msa1154600
chr7_4 mRNA 42125351 42133881 42125351 ID=Msa1154600-mRNA-1;Parent=Msa1154600;Name=Msa1154600-mRNA-1;_AED=0.03;_eAED=0.03;_QI=166|1|1|1|1|1|10|427|432
chr7_4 exon 42125351 42125726 42125351 ID=Msa1154600-mRNA-1:exon:10309;Parent=Msa1154600-mRNA-1
chr7_4 exon 42127536 42127641 42127536 ID=Msa1154600-mRNA-1:exon:10310;Parent=Msa1154600-mRNA-1
chr7_4 exon 42128591 42128651 42128591 ID=Msa1154600-mRNA-1:exon:10311;Parent=Msa1154600-mRNA-1
chr7_4 exon 42128750 42129042 42128750 ID=Msa1154600-mRNA-1:exon:10312;Parent=Msa1154600-mRNA-1
chr7_4 exon 42129700 42129839 42129700 ID=Msa1154600-mRNA-1:exon:10313;Parent=Msa1154600-mRNA-1
chr7_4 exon 42130595 42130669 42130595 ID=Msa1154600-mRNA-1:exon:10314;Parent=Msa1154600-mRNA-1
chr7_4 exon 42132202 42132292 42132202 ID=Msa1154600-mRNA-1:exon:10315;Parent=Msa1154600-mRNA-1
chr7_4 exon 42132648 42132851 42132648 ID=Msa1154600-mRNA-1:exon:10316;Parent=Msa1154600-mRNA-1
chr7_4 exon 42132961 42133005 42132961 ID=Msa1154600-mRNA-1:exon:10317;Parent=Msa1154600-mRNA-1
chr7_4 exon 42133381 42133881 42133381 ID=Msa1154600-mRNA-1:exon:10318;Parent=Msa1154600-mRNA-1
chr7_4 five_prime_UTR 42125351 42125516 42125351 ID=Msa1154600-mRNA-1:five_prime_utr;Parent=Msa1154600-mRNA-1
chr7_4 CDS 42125517 42125726 42125517 ID=Msa1154600-mRNA-1:cds;Parent=Msa1154600-mRNA-1
chr7_4 CDS 42127536 42127641 42127536 ID=Msa1154600-mRNA-1:cds;Parent=Msa1154600-mRNA-1
chr7_4 CDS 42128591 42128651 42128591 ID=Msa1154600-mRNA-1:cds;Parent=Msa1154600-mRNA-1
chr7_4 CDS 42128750 42129042 42128750 ID=Msa1154600-mRNA-1:cds;Parent=Msa1154600-mRNA-1
chr7_4 CDS 42129700 42129839 42129700 ID=Msa1154600-mRNA-1:cds;Parent=Msa1154600-mRNA-1
chr7_4 CDS 42130595 42130669 42130595 ID=Msa1154600-mRNA-1:cds;Parent=Msa1154600-mRNA-1
chr7_4 CDS 42132202 42132292 42132202 ID=Msa1154600-mRNA-1:cds;Parent=Msa1154600-mRNA-1
chr7_4 CDS 42132648 42132851 42132648 ID=Msa1154600-mRNA-1:cds;Parent=Msa1154600-mRNA-1
chr7_4 CDS 42132961 42133005 42132961 ID=Msa1154600-mRNA-1:cds;Parent=Msa1154600-mRNA-1
chr7_4 CDS 42133381 42133454 42133381 ID=Msa1154600-mRNA-1:cds;Parent=Msa1154600-mRNA-1
chr7_4 three_prime_UTR 42133455 42133881 42133455 ID=Msa1154600-mRNA-1:three_prime_utr;Parent=Msa1154600-mRNA-1
Gene Sequence

>Msa1154600

ATGGATGAATTCTTCCCCATTGTTGCGTTTTCTCTTCTTCTCGGTGCTATCATTGCTCTTCTCTTCTTCAACACATATTACCGTAAACGTCAATCCGAAGTCCGATCCATCGCAAATCTCAATCCAAATCCGAATCCAAACCCAATCGCGCCATCTTCAAAACCACTTCCGAACAAAAAATCTAATCCTAAACACCATTCCTCTGATAAGGATCAAGTCAAGCGGCATCATCCATTGGATTTGAATACCTTGAAAGGCCATGGTGATGCAGTTACAGGGATATGTTTCTCTCCTGATGGACGAAATTTGGCAACAGCTTGTGCTGATGGAGTGGTGAGAGTATTCAAGTTGGAGGATGCTTCGAGTAAAAGTTTCAAGTTTCACAGAATTAATTTGCCTCCTGGAGGTCCTCCAACTGCAATTGCATTTGCTGATGATGCATCCTCCATTGTTGTGTCATCACACAATCTCACTGGTTGTTCATTGTACATGTATGGTGAAGAGAAACCTAAAGTTTCTGAAGATAAGTCACAAGCAAAGCTTCCTCTCCCGGAGATTAAGTGGGAACATCGCAAAGTTCATGATAAAAAAGCAATAATTACTATGTTTGGAGCGTCCGCTACTTATGGCAGTGCTGATGGAAGTGCATTAATTGCATCGTGTTCAGAAGGAACGGACATCATTCTTTGGCATGGAAAAACCGGGAAGAGTTTGGGGCATGTGGATACAAATCAACTTAAAAATAACATGGCTACTATATCACCCAATGGACGTTTCATTGCAGCTGCAGCGTTCACTGCAGACGTTAAGGTCTGGGAGATTGTATATTCAAAGGATGGATCTGTCAAAGAAGTTTCAAATGTTATGCAGCTTAAGGGGCATAAGAGTGCTGTGACTTGGTTATGCTTTTCTCCAAACTCTGAGCAAATAATCACTGCATCCAAGGACGGTTCCTTAAGAATATGGAATATCAATGTTCGCTATCATATGGATGAGGATCCAAAGACACTGAAGGTGTTCCCAATTCCTCTTCGTGACTCTACTGGTACTACACTGCACTATGATCGCCTCAGTATTTCACCTGATGGAAAGATTCTGGCTGCAACCCATGGTTCCACATTGCAGTGGTTAAGTGTCGAGACTGGAAAGGTTTTGGATACAGCCGAAAAAGCCCATGATGGCGACATTACAGGCATTGCATGGGGGCCTAAAGCTATTCCTATGGGAAATGAAAAAGTCTTGGTTTTAGCGACAGCTAGTGGTGACAAGAAAGTGAAATTGTGGGCAGCTCCATCGTGA

Protein sequence

>Msa1154600

MDEFFPIVAFSLLLGAIIALLFFNTYYRKRQSEVRSIANLNPNPNPNPIAPSSKPLPNKKSNPKHHSSDKDQVKRHHPLDLNTLKGHGDAVTGICFSPDGRNLATACADGVVRVFKLEDASSKSFKFHRINLPPGGPPTAIAFADDASSIVVSSHNLTGCSLYMYGEEKPKVSEDKSQAKLPLPEIKWEHRKVHDKKAIITMFGASATYGSADGSALIASCSEGTDIILWHGKTGKSLGHVDTNQLKNNMATISPNGRFIAAAAFTADVKVWEIVYSKDGSVKEVSNVMQLKGHKSAVTWLCFSPNSEQIITASKDGSLRIWNINVRYHMDEDPKTLKVFPIPLRDSTGTTLHYDRLSISPDGKILAATHGSTLQWLSVETGKVLDTAEKAHDGDITGIAWGPKAIPMGNEKVLVLATASGDKKVKLWAAPS*