Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160090 | XP_003625060.1 | 91.875 | 320 | 26 | 0 | 1 | 320 | 1 | 320 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160090 | sp|Q9ZTA3|AOP1C_ARATH | 40.000 | 320 | 176 | 7 | 5 | 315 | 9 | 321 | 1.73e-69 | 222 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160090 | Q2HRI0 | 91.875 | 320 | 26 | 0 | 1 | 320 | 1 | 320 | 0.0 | 622 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1033840 | Msa1160090 | 0.853582 | 2.172879e-61 | -8.615850e-47 |
| Msa1073680 | Msa1160090 | 0.801438 | 9.006019e-49 | -8.615850e-47 |
| Msa1073730 | Msa1160090 | 0.874235 | 7.910357e-68 | -8.615850e-47 |
| Msa1114150 | Msa1160090 | 0.915456 | 5.760469e-85 | -8.615850e-47 |
| Msa1114170 | Msa1160090 | 0.832335 | 1.002393e-55 | -8.615850e-47 |
| Msa1160090 | Msa1160120 | 0.822419 | 2.393092e-53 | -8.615850e-47 |
| Msa1160090 | Msa1456600 | 0.822718 | 2.038966e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160090 | MtrunA17_Chr7g0256741 | 91.875 | 320 | 26 | 0 | 1 | 320 | 1 | 320 | 0.0 | 622 |
| Msa1160090 | MtrunA17_Chr4g0004071 | 39.937 | 318 | 185 | 5 | 1 | 316 | 1 | 314 | 5.82e-79 | 243 |
| Msa1160090 | MtrunA17_Chr4g0004061 | 38.871 | 319 | 188 | 6 | 1 | 316 | 1 | 315 | 1.27e-78 | 242 |
| Msa1160090 | MtrunA17_Chr1g0148781 | 34.043 | 329 | 199 | 12 | 1 | 316 | 1 | 324 | 2.46e-54 | 180 |
| Msa1160090 | MtrunA17_Chr4g0009541 | 32.026 | 306 | 193 | 9 | 1 | 297 | 1 | 300 | 9.36e-49 | 165 |
| Msa1160090 | MtrunA17_Chr4g0009561 | 31.761 | 318 | 200 | 10 | 10 | 316 | 7 | 318 | 3.03e-48 | 164 |
| Msa1160090 | MtrunA17_Chr3g0138351 | 29.841 | 315 | 209 | 8 | 10 | 316 | 7 | 317 | 1.46e-46 | 159 |
| Msa1160090 | MtrunA17_Chr7g0239101 | 30.868 | 311 | 188 | 13 | 6 | 304 | 51 | 346 | 1.04e-29 | 116 |
| Msa1160090 | MtrunA17_Chr8g0348951 | 26.910 | 301 | 192 | 9 | 10 | 297 | 10 | 295 | 3.65e-29 | 114 |
| Msa1160090 | MtrunA17_Chr7g0247741 | 27.551 | 294 | 198 | 7 | 10 | 297 | 11 | 295 | 8.71e-29 | 113 |
| Msa1160090 | MtrunA17_Chr8g0375701 | 30.744 | 309 | 200 | 8 | 8 | 310 | 53 | 353 | 2.28e-27 | 109 |
| Msa1160090 | MtrunA17_Chr6g0455481 | 30.690 | 290 | 178 | 10 | 7 | 286 | 39 | 315 | 9.59e-26 | 105 |
| Msa1160090 | MtrunA17_Chr7g0239111 | 30.794 | 315 | 189 | 14 | 3 | 304 | 48 | 346 | 3.67e-25 | 103 |
| Msa1160090 | MtrunA17_Chr7g0220011 | 31.126 | 302 | 175 | 12 | 10 | 297 | 39 | 321 | 1.06e-24 | 102 |
| Msa1160090 | MtrunA17_Chr2g0314401 | 29.221 | 308 | 193 | 9 | 10 | 309 | 51 | 341 | 1.80e-24 | 101 |
| Msa1160090 | MtrunA17_Chr1g0162361 | 25.743 | 303 | 199 | 8 | 3 | 287 | 18 | 312 | 2.96e-24 | 100 |
| Msa1160090 | MtrunA17_Chr4g0045411 | 27.986 | 293 | 197 | 7 | 6 | 285 | 26 | 317 | 5.29e-24 | 100 |
| Msa1160090 | MtrunA17_Chr5g0423201 | 28.159 | 277 | 180 | 7 | 39 | 304 | 71 | 339 | 7.39e-24 | 100 |
| Msa1160090 | MtrunA17_Chr5g0421041 | 28.037 | 321 | 176 | 13 | 10 | 304 | 45 | 336 | 1.69e-23 | 99.0 |
| Msa1160090 | MtrunA17_Chr1g0204181 | 28.082 | 292 | 195 | 9 | 33 | 313 | 81 | 368 | 2.02e-23 | 99.4 |
| Msa1160090 | MtrunA17_Chr5g0423191 | 29.180 | 305 | 191 | 10 | 8 | 300 | 45 | 336 | 5.17e-23 | 97.8 |
| Msa1160090 | MtrunA17_Chr5g0420941 | 29.492 | 295 | 152 | 13 | 39 | 304 | 69 | 336 | 8.13e-23 | 97.1 |
| Msa1160090 | MtrunA17_Chr8g0351101 | 28.269 | 283 | 190 | 9 | 29 | 301 | 72 | 351 | 2.94e-22 | 95.9 |
| Msa1160090 | MtrunA17_Chr2g0314391 | 31.724 | 290 | 172 | 11 | 10 | 286 | 70 | 346 | 4.20e-22 | 95.5 |
| Msa1160090 | MtrunA17_Chr3g0130391 | 27.564 | 312 | 189 | 12 | 11 | 300 | 67 | 363 | 5.80e-22 | 95.1 |
| Msa1160090 | MtrunA17_Chr5g0421011 | 28.205 | 312 | 187 | 13 | 10 | 304 | 47 | 338 | 6.25e-22 | 94.7 |
| Msa1160090 | MtrunA17_Chr7g0239121 | 28.254 | 315 | 198 | 14 | 3 | 304 | 44 | 343 | 7.54e-22 | 94.7 |
| Msa1160090 | MtrunA17_Chr2g0314381 | 28.421 | 285 | 188 | 8 | 10 | 286 | 77 | 353 | 7.70e-22 | 94.7 |
| Msa1160090 | MtrunA17_Chr5g0423251 | 28.125 | 320 | 177 | 13 | 5 | 298 | 42 | 334 | 1.42e-21 | 93.6 |
| Msa1160090 | MtrunA17_Chr1g0162321 | 31.694 | 183 | 117 | 4 | 118 | 297 | 194 | 371 | 1.56e-21 | 94.0 |
| Msa1160090 | MtrunA17_Chr5g0407781 | 23.794 | 311 | 209 | 6 | 6 | 307 | 1 | 292 | 1.73e-21 | 92.8 |
| Msa1160090 | MtrunA17_Chr8g0370711 | 26.752 | 314 | 198 | 11 | 10 | 307 | 52 | 349 | 1.85e-21 | 93.6 |
| Msa1160090 | MtrunA17_Chr1g0148771 | 25.391 | 256 | 178 | 4 | 10 | 263 | 63 | 307 | 4.64e-21 | 92.4 |
| Msa1160090 | MtrunA17_Chr6g0474391 | 27.483 | 302 | 204 | 10 | 10 | 300 | 64 | 361 | 1.01e-20 | 91.7 |
| Msa1160090 | MtrunA17_Chr7g0232161 | 31.179 | 263 | 151 | 13 | 10 | 261 | 60 | 303 | 1.23e-20 | 90.5 |
| Msa1160090 | MtrunA17_Chr1g0162351 | 30.636 | 173 | 116 | 3 | 118 | 287 | 194 | 365 | 2.09e-20 | 90.9 |
| Msa1160090 | MtrunA17_Chr5g0420721 | 32.979 | 188 | 97 | 6 | 148 | 310 | 65 | 248 | 2.87e-20 | 88.6 |
| Msa1160090 | MtrunA17_Chr7g0220001 | 29.389 | 262 | 167 | 8 | 8 | 263 | 39 | 288 | 3.51e-20 | 89.7 |
| Msa1160090 | MtrunA17_Chr8g0375681 | 30.924 | 249 | 149 | 8 | 51 | 286 | 20 | 258 | 3.63e-20 | 89.0 |
| Msa1160090 | MtrunA17_Chr8g0345831 | 25.939 | 293 | 193 | 8 | 5 | 286 | 37 | 316 | 4.70e-20 | 89.4 |
| Msa1160090 | MtrunA17_Chr2g0296371 | 27.393 | 303 | 206 | 10 | 10 | 304 | 50 | 346 | 4.79e-20 | 89.7 |
| Msa1160090 | MtrunA17_Chr5g0423211 | 27.554 | 323 | 175 | 13 | 10 | 303 | 47 | 339 | 4.88e-20 | 89.4 |
| Msa1160090 | MtrunA17_Chr8g0384461 | 26.019 | 319 | 197 | 14 | 10 | 306 | 47 | 348 | 4.88e-20 | 89.4 |
| Msa1160090 | MtrunA17_Chr5g0420981 | 28.571 | 266 | 169 | 7 | 10 | 266 | 53 | 306 | 4.89e-20 | 89.4 |
| Msa1160090 | MtrunA17_Chr5g0412671 | 25.743 | 303 | 195 | 10 | 10 | 297 | 38 | 325 | 6.27e-20 | 89.0 |
| Msa1160090 | MtrunA17_Chr5g0423221 | 28.674 | 279 | 172 | 11 | 40 | 303 | 96 | 362 | 6.28e-20 | 89.4 |
| Msa1160090 | MtrunA17_Chr4g0045471 | 30.851 | 188 | 121 | 5 | 119 | 302 | 150 | 332 | 6.29e-20 | 89.0 |
| Msa1160090 | MtrunA17_Chr4g0045441 | 29.412 | 187 | 124 | 4 | 119 | 302 | 150 | 331 | 7.71e-20 | 89.0 |
| Msa1160090 | MtrunA17_Chr3g0145171 | 27.619 | 315 | 194 | 12 | 10 | 307 | 52 | 349 | 9.85e-20 | 88.6 |
| Msa1160090 | MtrunA17_Chr5g0420901 | 27.211 | 294 | 160 | 12 | 39 | 304 | 70 | 337 | 1.02e-19 | 88.6 |
| Msa1160090 | MtrunA17_Chr8g0375671 | 29.693 | 293 | 178 | 11 | 10 | 287 | 52 | 331 | 1.55e-19 | 88.2 |
| Msa1160090 | MtrunA17_Chr4g0064781 | 27.652 | 264 | 173 | 6 | 34 | 286 | 67 | 323 | 1.83e-19 | 87.8 |
| Msa1160090 | MtrunA17_Chr4g0068891 | 27.653 | 311 | 186 | 12 | 9 | 300 | 19 | 309 | 2.25e-19 | 87.0 |
| Msa1160090 | MtrunA17_Chr2g0332191 | 25.000 | 300 | 200 | 11 | 5 | 292 | 47 | 333 | 2.48e-19 | 87.4 |
| Msa1160090 | MtrunA17_Chr5g0407731 | 24.841 | 314 | 190 | 8 | 6 | 301 | 29 | 314 | 5.61e-19 | 86.3 |
| Msa1160090 | MtrunA17_Chr2g0293931 | 31.551 | 187 | 114 | 7 | 127 | 300 | 8 | 193 | 6.93e-19 | 83.6 |
| Msa1160090 | MtrunA17_Chr8g0370721 | 26.846 | 298 | 185 | 10 | 10 | 290 | 52 | 333 | 8.25e-19 | 85.9 |
| Msa1160090 | MtrunA17_Chr1g0184121 | 30.000 | 180 | 118 | 4 | 117 | 294 | 143 | 316 | 8.43e-19 | 85.9 |
| Msa1160090 | MtrunA17_Chr5g0421091 | 26.994 | 326 | 184 | 13 | 5 | 304 | 40 | 337 | 9.10e-19 | 85.9 |
| Msa1160090 | MtrunA17_Chr5g0412651 | 25.413 | 303 | 196 | 10 | 10 | 297 | 38 | 325 | 1.15e-18 | 85.5 |
| Msa1160090 | MtrunA17_Chr4g0045431 | 28.877 | 187 | 125 | 4 | 119 | 302 | 150 | 331 | 1.17e-18 | 85.5 |
| Msa1160090 | MtrunA17_Chr8g0365241 | 30.769 | 260 | 159 | 8 | 39 | 286 | 82 | 332 | 1.27e-18 | 85.5 |
| Msa1160090 | MtrunA17_Chr5g0412681 | 24.922 | 321 | 177 | 13 | 5 | 297 | 28 | 312 | 1.92e-18 | 84.7 |
| Msa1160090 | MtrunA17_Chr1g0184111 | 30.055 | 183 | 120 | 4 | 117 | 297 | 143 | 319 | 2.91e-18 | 84.3 |
| Msa1160090 | MtrunA17_Chr7g0239821 | 25.296 | 253 | 169 | 10 | 63 | 304 | 112 | 355 | 2.98e-18 | 84.3 |
| Msa1160090 | MtrunA17_Chr7g0250511 | 26.490 | 302 | 202 | 10 | 5 | 297 | 44 | 334 | 3.20e-18 | 84.3 |
| Msa1160090 | MtrunA17_Chr5g0421101 | 29.779 | 272 | 159 | 12 | 41 | 295 | 73 | 329 | 4.65e-18 | 83.6 |
| Msa1160090 | MtrunA17_Chr1g0184161 | 26.263 | 297 | 197 | 10 | 10 | 298 | 38 | 320 | 5.52e-18 | 83.6 |
| Msa1160090 | MtrunA17_Chr3g0093761 | 27.597 | 308 | 202 | 11 | 8 | 307 | 54 | 348 | 6.09e-18 | 83.6 |
| Msa1160090 | MtrunA17_Chr8g0375601 | 28.374 | 289 | 184 | 9 | 10 | 286 | 48 | 325 | 6.52e-18 | 83.6 |
| Msa1160090 | MtrunA17_Chr3g0128001 | 27.376 | 263 | 167 | 6 | 10 | 263 | 38 | 285 | 9.30e-18 | 82.8 |
| Msa1160090 | MtrunA17_Chr5g0424201 | 26.948 | 308 | 187 | 16 | 10 | 298 | 44 | 332 | 1.47e-17 | 82.0 |
| Msa1160090 | MtrunA17_Chr3g0093751 | 28.247 | 308 | 201 | 10 | 8 | 307 | 54 | 349 | 1.67e-17 | 82.0 |
| Msa1160090 | MtrunA17_Chr4g0053251 | 26.374 | 273 | 180 | 7 | 10 | 263 | 8 | 278 | 1.71e-17 | 81.6 |
| Msa1160090 | MtrunA17_Chr5g0420881 | 35.338 | 133 | 82 | 3 | 174 | 304 | 4 | 134 | 2.48e-17 | 77.8 |
| Msa1160090 | MtrunA17_Chr7g0225881 | 26.552 | 290 | 193 | 9 | 9 | 288 | 66 | 345 | 3.11e-17 | 81.6 |
| Msa1160090 | MtrunA17_Chr3g0125201 | 26.667 | 315 | 202 | 8 | 10 | 309 | 3 | 303 | 3.68e-17 | 80.5 |
| Msa1160090 | MtrunA17_Chr1g0162191 | 29.225 | 284 | 187 | 9 | 10 | 286 | 47 | 323 | 4.98e-17 | 80.9 |
| Msa1160090 | MtrunA17_Chr3g0113641 | 27.090 | 299 | 191 | 9 | 10 | 292 | 50 | 337 | 5.07e-17 | 80.9 |
| Msa1160090 | MtrunA17_Chr5g0394071 | 29.710 | 138 | 95 | 2 | 126 | 263 | 2 | 137 | 5.96e-17 | 77.8 |
| Msa1160090 | MtrunA17_Chr5g0420951 | 25.817 | 306 | 172 | 13 | 7 | 285 | 50 | 327 | 7.94e-17 | 80.1 |
| Msa1160090 | MtrunA17_Chr1g0184151 | 28.736 | 174 | 117 | 5 | 117 | 287 | 144 | 313 | 8.90e-17 | 80.1 |
| Msa1160090 | MtrunA17_Chr3g0093741 | 26.948 | 308 | 205 | 10 | 8 | 307 | 54 | 349 | 1.22e-16 | 79.7 |
| Msa1160090 | MtrunA17_Chr3g0125421 | 26.403 | 303 | 200 | 12 | 11 | 298 | 37 | 331 | 1.52e-16 | 79.3 |
| Msa1160090 | MtrunA17_Chr4g0050031 | 25.796 | 314 | 205 | 11 | 4 | 303 | 56 | 355 | 1.80e-16 | 79.3 |
| Msa1160090 | MtrunA17_Chr7g0239071 | 29.329 | 283 | 174 | 14 | 38 | 304 | 19 | 291 | 3.59e-16 | 77.8 |
| Msa1160090 | MtrunA17_Chr3g0087031 | 28.571 | 273 | 177 | 10 | 7 | 272 | 57 | 318 | 3.80e-16 | 78.2 |
| Msa1160090 | MtrunA17_Chr7g0265221 | 26.230 | 305 | 182 | 9 | 9 | 288 | 69 | 355 | 4.11e-16 | 78.2 |
| Msa1160090 | MtrunA17_Chr8g0375571 | 24.916 | 297 | 195 | 10 | 5 | 286 | 40 | 323 | 4.57e-16 | 78.2 |
| Msa1160090 | MtrunA17_Chr4g0045451 | 26.351 | 296 | 199 | 9 | 10 | 287 | 26 | 320 | 6.31e-16 | 77.4 |
| Msa1160090 | MtrunA17_Chr1g0194321 | 34.677 | 124 | 77 | 3 | 180 | 300 | 199 | 321 | 6.96e-16 | 77.4 |
| Msa1160090 | MtrunA17_Chr7g0242551 | 25.597 | 293 | 204 | 9 | 10 | 292 | 54 | 342 | 9.16e-16 | 77.0 |
| Msa1160090 | MtrunA17_Chr4g0006371 | 26.087 | 299 | 204 | 10 | 10 | 296 | 62 | 355 | 1.79e-15 | 76.3 |
| Msa1160090 | MtrunA17_Chr1g0191201 | 26.296 | 270 | 171 | 8 | 11 | 263 | 54 | 312 | 1.81e-15 | 76.3 |
| Msa1160090 | MtrunA17_Chr8g0336761 | 26.087 | 299 | 190 | 12 | 6 | 288 | 56 | 339 | 2.89e-15 | 75.9 |
| Msa1160090 | MtrunA17_Chr2g0313111 | 26.910 | 301 | 174 | 9 | 1 | 280 | 19 | 294 | 3.85e-15 | 75.1 |
| Msa1160090 | MtrunA17_Chr2g0285931 | 36.792 | 106 | 63 | 2 | 181 | 283 | 200 | 304 | 6.65e-15 | 74.3 |
| Msa1160090 | MtrunA17_Chr3g0121141 | 25.610 | 328 | 203 | 13 | 11 | 320 | 5 | 309 | 7.77e-15 | 73.9 |
| Msa1160090 | MtrunA17_Chr7g0233661 | 35.354 | 99 | 62 | 2 | 165 | 263 | 15 | 111 | 8.47e-15 | 70.9 |
| Msa1160090 | MtrunA17_Chr3g0109041 | 26.174 | 298 | 191 | 10 | 7 | 286 | 39 | 325 | 1.16e-14 | 73.9 |
| Msa1160090 | MtrunA17_Chr8g0384481 | 24.211 | 285 | 203 | 8 | 10 | 285 | 59 | 339 | 1.86e-14 | 73.6 |
| Msa1160090 | MtrunA17_Chr1g0184101 | 29.255 | 188 | 114 | 6 | 117 | 297 | 144 | 319 | 1.87e-14 | 73.2 |
| Msa1160090 | MtrunA17_Chr2g0311631 | 29.352 | 293 | 169 | 14 | 3 | 274 | 48 | 323 | 2.00e-14 | 73.2 |
| Msa1160090 | MtrunA17_Chr8g0336751 | 25.839 | 298 | 206 | 11 | 9 | 299 | 93 | 382 | 2.74e-14 | 73.2 |
| Msa1160090 | MtrunA17_Chr5g0424211 | 25.773 | 291 | 181 | 12 | 10 | 282 | 42 | 315 | 2.99e-14 | 72.4 |
| Msa1160090 | MtrunA17_Chr8g0358941 | 40.860 | 93 | 51 | 2 | 184 | 273 | 203 | 294 | 3.30e-14 | 72.4 |
| Msa1160090 | MtrunA17_Chr8g0389941 | 24.260 | 338 | 217 | 13 | 1 | 313 | 23 | 346 | 3.71e-14 | 72.4 |
| Msa1160090 | MtrunA17_Chr1g0179801 | 25.166 | 302 | 184 | 12 | 10 | 288 | 66 | 348 | 4.35e-14 | 72.4 |
| Msa1160090 | MtrunA17_Chr2g0289341 | 24.762 | 315 | 206 | 10 | 11 | 312 | 5 | 301 | 4.40e-14 | 72.0 |
| Msa1160090 | MtrunA17_Chr8g0336781 | 25.084 | 299 | 194 | 11 | 6 | 288 | 91 | 375 | 7.95e-14 | 71.6 |
| Msa1160090 | MtrunA17_Chr5g0437181 | 27.607 | 326 | 168 | 18 | 3 | 292 | 43 | 336 | 8.10e-14 | 71.2 |
| Msa1160090 | MtrunA17_Chr4g0037611 | 30.469 | 128 | 84 | 4 | 138 | 263 | 3 | 127 | 9.16e-14 | 68.6 |
| Msa1160090 | MtrunA17_Chr3g0102041 | 26.014 | 296 | 199 | 10 | 7 | 289 | 36 | 324 | 1.00e-13 | 71.2 |
| Msa1160090 | MtrunA17_Chr7g0239091 | 32.331 | 133 | 86 | 3 | 174 | 304 | 311 | 441 | 1.14e-13 | 71.2 |
| Msa1160090 | MtrunA17_Chr4g0066121 | 24.415 | 299 | 192 | 10 | 8 | 288 | 58 | 340 | 2.06e-13 | 70.1 |
| Msa1160090 | MtrunA17_Chr4g0045461 | 31.915 | 141 | 92 | 3 | 150 | 287 | 180 | 319 | 2.64e-13 | 70.1 |
| Msa1160090 | MtrunA17_Chr4g0052251 | 32.000 | 125 | 80 | 3 | 182 | 303 | 200 | 322 | 4.34e-13 | 68.9 |
| Msa1160090 | MtrunA17_Chr5g0398291 | 25.723 | 311 | 203 | 13 | 10 | 302 | 47 | 347 | 5.26e-13 | 68.9 |
| Msa1160090 | MtrunA17_Chr5g0439011 | 34.694 | 147 | 85 | 5 | 185 | 323 | 174 | 317 | 5.75e-13 | 68.6 |
| Msa1160090 | MtrunA17_Chr2g0311831 | 24.916 | 297 | 204 | 10 | 6 | 292 | 64 | 351 | 2.45e-12 | 67.0 |
| Msa1160090 | MtrunA17_Chr6g0472861 | 24.739 | 287 | 196 | 10 | 10 | 286 | 70 | 346 | 3.43e-12 | 66.6 |
| Msa1160090 | MtrunA17_Chr8g0336631 | 23.490 | 298 | 200 | 10 | 6 | 288 | 56 | 340 | 5.14e-12 | 66.2 |
| Msa1160090 | MtrunA17_Chr8g0336851 | 23.588 | 301 | 193 | 11 | 7 | 288 | 57 | 339 | 6.09e-12 | 65.9 |
| Msa1160090 | MtrunA17_Chr2g0311861 | 26.460 | 291 | 174 | 12 | 8 | 288 | 62 | 322 | 6.20e-12 | 65.9 |
| Msa1160090 | MtrunA17_Chr2g0319491 | 23.183 | 289 | 200 | 10 | 10 | 292 | 33 | 305 | 6.23e-12 | 65.5 |
| Msa1160090 | MtrunA17_Chr8g0336861 | 24.159 | 327 | 209 | 14 | 7 | 313 | 57 | 364 | 1.09e-11 | 65.1 |
| Msa1160090 | MtrunA17_Chr3g0126761 | 35.075 | 134 | 81 | 5 | 174 | 305 | 94 | 223 | 1.32e-11 | 63.5 |
| Msa1160090 | MtrunA17_Chr3g0126741 | 25.552 | 317 | 195 | 14 | 4 | 302 | 53 | 346 | 7.36e-11 | 62.4 |
| Msa1160090 | MtrunA17_Chr2g0314371 | 25.000 | 224 | 139 | 6 | 39 | 236 | 78 | 298 | 8.22e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160090 | AT1G52800.1 | 45.130 | 308 | 165 | 4 | 10 | 316 | 10 | 314 | 1.68e-94 | 283 |
| Msa1160090 | AT1G52820.1 | 42.812 | 320 | 176 | 5 | 1 | 316 | 1 | 317 | 3.54e-86 | 262 |
| Msa1160090 | AT1G80320.1 | 38.801 | 317 | 181 | 6 | 8 | 316 | 7 | 318 | 8.70e-78 | 241 |
| Msa1160090 | AT1G52790.1 | 38.658 | 313 | 187 | 5 | 6 | 316 | 1 | 310 | 9.99e-78 | 240 |
| Msa1160090 | AT4G03070.1 | 40.000 | 320 | 176 | 7 | 5 | 315 | 9 | 321 | 1.76e-70 | 222 |
| Msa1160090 | AT1G52820.2 | 41.176 | 238 | 136 | 3 | 1 | 236 | 1 | 236 | 3.80e-60 | 193 |
| Msa1160090 | AT1G15540.2 | 36.943 | 314 | 188 | 7 | 10 | 316 | 12 | 322 | 2.07e-59 | 193 |
| Msa1160090 | AT1G15540.1 | 36.943 | 314 | 188 | 7 | 10 | 316 | 9 | 319 | 2.10e-59 | 193 |
| Msa1160090 | AT1G15540.4 | 36.943 | 314 | 188 | 7 | 10 | 316 | 9 | 319 | 2.10e-59 | 193 |
| Msa1160090 | AT1G15540.3 | 36.943 | 314 | 188 | 7 | 10 | 316 | 16 | 326 | 2.44e-59 | 193 |
| Msa1160090 | AT1G52810.1 | 33.754 | 317 | 171 | 7 | 5 | 316 | 7 | 289 | 9.49e-54 | 178 |
| Msa1160090 | AT1G28030.1 | 33.841 | 328 | 199 | 10 | 1 | 316 | 1 | 322 | 7.18e-52 | 174 |
| Msa1160090 | AT4G03050.2 | 35.979 | 189 | 117 | 2 | 3 | 191 | 1 | 185 | 7.80e-33 | 126 |
| Msa1160090 | AT4G03050.2 | 38.571 | 140 | 81 | 4 | 181 | 317 | 271 | 408 | 6.01e-25 | 104 |
| Msa1160090 | AT4G03050.1 | 35.979 | 189 | 117 | 2 | 3 | 191 | 1 | 185 | 7.80e-33 | 126 |
| Msa1160090 | AT4G03050.1 | 38.571 | 140 | 81 | 4 | 181 | 317 | 271 | 408 | 6.01e-25 | 104 |
| Msa1160090 | AT5G51810.1 | 27.393 | 303 | 198 | 9 | 10 | 300 | 63 | 355 | 2.17e-25 | 105 |
| Msa1160090 | AT3G21420.1 | 30.033 | 303 | 199 | 10 | 10 | 304 | 55 | 352 | 2.22e-23 | 99.4 |
| Msa1160090 | AT1G80330.1 | 27.941 | 272 | 168 | 10 | 1 | 259 | 40 | 296 | 3.95e-23 | 98.6 |
| Msa1160090 | AT4G25420.1 | 26.087 | 322 | 221 | 10 | 10 | 320 | 61 | 376 | 5.97e-23 | 98.2 |
| Msa1160090 | AT4G21690.1 | 25.338 | 296 | 197 | 5 | 4 | 286 | 41 | 325 | 1.23e-22 | 97.1 |
| Msa1160090 | AT5G07200.1 | 27.208 | 283 | 187 | 11 | 10 | 278 | 58 | 335 | 3.48e-22 | 96.3 |
| Msa1160090 | AT3G19010.1 | 27.119 | 295 | 191 | 9 | 10 | 286 | 28 | 316 | 5.60e-22 | 95.1 |
| Msa1160090 | AT3G19010.4 | 27.119 | 295 | 191 | 9 | 10 | 286 | 28 | 316 | 5.60e-22 | 95.1 |
| Msa1160090 | AT1G17020.1 | 28.328 | 293 | 180 | 12 | 10 | 286 | 53 | 331 | 1.68e-21 | 94.0 |
| Msa1160090 | AT1G78550.1 | 27.946 | 297 | 184 | 11 | 5 | 286 | 48 | 329 | 7.25e-21 | 92.0 |
| Msa1160090 | AT4G25310.1 | 34.762 | 210 | 121 | 9 | 63 | 263 | 99 | 301 | 8.38e-21 | 92.0 |
| Msa1160090 | AT4G23340.1 | 25.574 | 305 | 190 | 10 | 10 | 297 | 10 | 294 | 8.47e-21 | 91.7 |
| Msa1160090 | AT5G07480.1 | 26.791 | 321 | 202 | 10 | 4 | 305 | 38 | 344 | 1.13e-20 | 91.7 |
| Msa1160090 | AT1G17010.1 | 27.425 | 299 | 191 | 11 | 10 | 295 | 54 | 339 | 6.62e-20 | 89.4 |
| Msa1160090 | AT4G25300.1 | 29.588 | 267 | 161 | 11 | 10 | 263 | 52 | 304 | 2.03e-19 | 88.2 |
| Msa1160090 | AT2G38240.1 | 28.716 | 296 | 192 | 10 | 10 | 295 | 48 | 334 | 3.17e-19 | 87.4 |
| Msa1160090 | AT1G78550.2 | 30.962 | 239 | 138 | 10 | 63 | 286 | 25 | 251 | 4.35e-19 | 85.9 |
| Msa1160090 | AT1G30040.1 | 28.322 | 286 | 166 | 9 | 7 | 273 | 28 | 293 | 5.77e-19 | 86.7 |
| Msa1160090 | AT1G14120.2 | 25.828 | 302 | 187 | 8 | 3 | 290 | 1 | 279 | 1.42e-18 | 85.1 |
| Msa1160090 | AT1G14120.1 | 25.828 | 302 | 187 | 8 | 3 | 290 | 1 | 279 | 1.42e-18 | 85.1 |
| Msa1160090 | AT1G14120.3 | 25.828 | 302 | 187 | 8 | 3 | 290 | 1 | 279 | 1.42e-18 | 85.1 |
| Msa1160090 | AT2G36690.2 | 34.302 | 172 | 106 | 6 | 118 | 285 | 167 | 335 | 2.35e-18 | 85.1 |
| Msa1160090 | AT2G36690.1 | 34.302 | 172 | 106 | 6 | 118 | 285 | 167 | 335 | 2.35e-18 | 85.1 |
| Msa1160090 | AT1G06620.1 | 27.778 | 288 | 190 | 9 | 10 | 288 | 62 | 340 | 2.35e-18 | 85.1 |
| Msa1160090 | AT1G14130.1 | 25.000 | 296 | 179 | 8 | 9 | 287 | 8 | 277 | 2.40e-18 | 84.3 |
| Msa1160090 | AT3G19010.3 | 26.441 | 295 | 163 | 11 | 10 | 286 | 28 | 286 | 4.08e-18 | 84.0 |
| Msa1160090 | AT4G23340.2 | 31.875 | 160 | 98 | 5 | 140 | 297 | 26 | 176 | 8.83e-18 | 80.9 |
| Msa1160090 | AT5G05600.1 | 28.866 | 291 | 196 | 9 | 10 | 292 | 62 | 349 | 1.07e-17 | 83.2 |
| Msa1160090 | AT5G51810.2 | 27.083 | 240 | 156 | 7 | 10 | 239 | 63 | 293 | 1.31e-17 | 82.0 |
| Msa1160090 | AT5G24530.1 | 25.484 | 310 | 204 | 8 | 3 | 300 | 29 | 323 | 1.43e-17 | 82.8 |
| Msa1160090 | AT3G50210.4 | 26.978 | 278 | 178 | 8 | 10 | 263 | 8 | 284 | 2.70e-17 | 81.6 |
| Msa1160090 | AT3G50210.1 | 26.978 | 278 | 178 | 8 | 10 | 263 | 8 | 284 | 2.70e-17 | 81.6 |
| Msa1160090 | AT3G50210.3 | 26.978 | 278 | 178 | 8 | 10 | 263 | 8 | 284 | 2.70e-17 | 81.6 |
| Msa1160090 | AT3G13610.1 | 27.517 | 298 | 187 | 14 | 8 | 292 | 60 | 341 | 2.81e-17 | 82.0 |
| Msa1160090 | AT1G78440.1 | 27.599 | 279 | 173 | 9 | 8 | 272 | 16 | 279 | 3.28e-17 | 81.3 |
| Msa1160090 | AT1G15550.1 | 27.119 | 295 | 189 | 11 | 10 | 292 | 57 | 337 | 4.15e-17 | 81.6 |
| Msa1160090 | AT1G44090.1 | 37.681 | 138 | 82 | 3 | 154 | 289 | 214 | 349 | 5.19e-17 | 81.3 |
| Msa1160090 | AT5G07480.2 | 30.457 | 197 | 126 | 6 | 117 | 305 | 42 | 235 | 1.43e-16 | 78.2 |
| Msa1160090 | AT5G08640.2 | 25.817 | 306 | 193 | 9 | 10 | 298 | 43 | 331 | 3.35e-16 | 78.6 |
| Msa1160090 | AT5G08640.1 | 25.817 | 306 | 193 | 9 | 10 | 298 | 43 | 331 | 3.35e-16 | 78.6 |
| Msa1160090 | AT3G49620.1 | 24.916 | 297 | 200 | 9 | 9 | 284 | 33 | 327 | 6.52e-16 | 77.8 |
| Msa1160090 | AT4G25300.2 | 38.400 | 125 | 74 | 3 | 172 | 294 | 119 | 242 | 7.00e-16 | 76.6 |
| Msa1160090 | AT3G49630.1 | 24.662 | 296 | 198 | 6 | 9 | 282 | 8 | 300 | 7.08e-16 | 77.8 |
| Msa1160090 | AT4G25310.2 | 31.731 | 208 | 102 | 9 | 63 | 263 | 99 | 273 | 1.22e-15 | 77.0 |
| Msa1160090 | AT5G20400.1 | 25.949 | 316 | 199 | 12 | 10 | 307 | 45 | 343 | 1.82e-15 | 76.6 |
| Msa1160090 | AT1G02400.1 | 36.885 | 122 | 70 | 5 | 184 | 300 | 198 | 317 | 3.50e-15 | 75.5 |
| Msa1160090 | AT5G59530.1 | 26.829 | 287 | 197 | 7 | 10 | 288 | 58 | 339 | 4.87e-15 | 75.5 |
| Msa1160090 | AT3G49630.3 | 25.347 | 288 | 193 | 7 | 12 | 282 | 14 | 296 | 5.42e-15 | 75.1 |
| Msa1160090 | AT5G63590.1 | 26.230 | 305 | 186 | 13 | 10 | 294 | 14 | 299 | 6.66e-15 | 74.7 |
| Msa1160090 | AT1G55290.1 | 26.296 | 270 | 173 | 11 | 4 | 263 | 56 | 309 | 7.37e-15 | 75.1 |
| Msa1160090 | AT2G34555.1 | 27.341 | 267 | 167 | 9 | 9 | 264 | 26 | 276 | 1.22e-14 | 73.9 |
| Msa1160090 | AT4G25420.2 | 25.847 | 236 | 162 | 7 | 10 | 236 | 61 | 292 | 3.19e-14 | 72.4 |
| Msa1160090 | AT5G63600.1 | 26.190 | 294 | 193 | 9 | 10 | 295 | 33 | 310 | 5.30e-14 | 72.0 |
| Msa1160090 | AT4G22880.1 | 26.174 | 298 | 198 | 13 | 10 | 292 | 47 | 337 | 5.64e-14 | 72.4 |
| Msa1160090 | AT4G22880.2 | 26.174 | 298 | 198 | 13 | 10 | 292 | 47 | 337 | 5.64e-14 | 72.4 |
| Msa1160090 | AT4G22880.3 | 26.174 | 298 | 198 | 13 | 10 | 292 | 47 | 337 | 5.64e-14 | 72.4 |
| Msa1160090 | AT3G19000.1 | 29.508 | 183 | 121 | 4 | 118 | 297 | 151 | 328 | 6.34e-14 | 72.0 |
| Msa1160090 | AT3G49630.2 | 28.571 | 168 | 115 | 2 | 118 | 282 | 62 | 227 | 8.21e-14 | 70.9 |
| Msa1160090 | AT5G20550.1 | 25.753 | 299 | 199 | 10 | 10 | 295 | 45 | 333 | 1.01e-13 | 71.6 |
| Msa1160090 | AT1G06650.2 | 24.567 | 289 | 204 | 9 | 8 | 288 | 62 | 344 | 2.09e-13 | 70.5 |
| Msa1160090 | AT4G10500.1 | 25.743 | 303 | 201 | 9 | 3 | 294 | 37 | 326 | 2.10e-13 | 70.5 |
| Msa1160090 | AT3G11180.2 | 27.839 | 273 | 175 | 10 | 34 | 292 | 114 | 378 | 3.12e-13 | 70.5 |
| Msa1160090 | AT3G50210.2 | 29.139 | 151 | 102 | 2 | 118 | 263 | 52 | 202 | 3.40e-13 | 68.9 |
| Msa1160090 | AT3G11180.1 | 28.727 | 275 | 170 | 11 | 34 | 292 | 114 | 378 | 3.65e-13 | 70.1 |
| Msa1160090 | AT3G55970.1 | 24.422 | 303 | 196 | 10 | 10 | 292 | 52 | 341 | 4.11e-13 | 69.7 |
| Msa1160090 | AT4G21200.1 | 34.343 | 99 | 63 | 2 | 165 | 263 | 191 | 287 | 5.67e-13 | 69.3 |
| Msa1160090 | AT3G12900.1 | 34.906 | 106 | 64 | 3 | 184 | 286 | 226 | 329 | 8.23e-13 | 68.9 |
| Msa1160090 | AT4G16330.2 | 26.007 | 273 | 178 | 8 | 10 | 272 | 67 | 325 | 8.67e-13 | 68.9 |
| Msa1160090 | AT4G10490.1 | 25.862 | 290 | 189 | 9 | 3 | 280 | 35 | 310 | 8.95e-13 | 68.6 |
| Msa1160090 | AT4G16330.1 | 29.114 | 158 | 104 | 4 | 118 | 272 | 67 | 219 | 9.39e-13 | 67.8 |
| Msa1160090 | AT5G63595.1 | 27.027 | 259 | 154 | 10 | 7 | 260 | 22 | 250 | 9.62e-13 | 67.8 |
| Msa1160090 | AT1G80340.1 | 26.174 | 298 | 192 | 12 | 8 | 292 | 48 | 330 | 1.28e-12 | 68.2 |
| Msa1160090 | AT5G54000.2 | 25.424 | 295 | 181 | 11 | 34 | 303 | 68 | 348 | 1.72e-12 | 67.8 |
| Msa1160090 | AT5G54000.1 | 26.619 | 278 | 165 | 11 | 51 | 303 | 5 | 268 | 2.14e-12 | 66.6 |
| Msa1160090 | AT2G30830.1 | 23.248 | 314 | 206 | 10 | 2 | 288 | 28 | 333 | 3.81e-12 | 67.0 |
| Msa1160090 | AT1G03410.2 | 24.390 | 287 | 199 | 8 | 10 | 286 | 57 | 335 | 1.02e-11 | 65.5 |
| Msa1160090 | AT1G03410.1 | 24.390 | 287 | 199 | 8 | 10 | 286 | 94 | 372 | 1.27e-11 | 65.5 |
| Msa1160090 | AT1G06640.1 | 24.746 | 295 | 196 | 11 | 8 | 288 | 62 | 344 | 1.38e-11 | 65.1 |
| Msa1160090 | AT3G61400.1 | 28.409 | 176 | 104 | 6 | 127 | 288 | 179 | 346 | 1.39e-11 | 65.1 |
| Msa1160090 | AT1G50960.1 | 21.673 | 263 | 197 | 7 | 3 | 263 | 33 | 288 | 1.64e-11 | 64.7 |
| Msa1160090 | AT5G43935.1 | 26.821 | 302 | 182 | 14 | 6 | 297 | 15 | 287 | 1.80e-11 | 64.3 |
| Msa1160090 | AT1G49390.2 | 29.121 | 182 | 105 | 6 | 118 | 286 | 74 | 244 | 2.20e-11 | 63.9 |
| Msa1160090 | AT1G77330.1 | 32.800 | 125 | 80 | 3 | 185 | 306 | 176 | 299 | 2.30e-11 | 64.3 |
| Msa1160090 | AT1G49390.1 | 29.121 | 182 | 105 | 6 | 118 | 286 | 153 | 323 | 4.44e-11 | 63.5 |
Find 64 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTACCAGGTTTCATGTTT+TGG | 0.196129 | 7_4:-49861370 | None:intergenic |
| GTCTAATTCTCCAAACAATT+TGG | 0.198154 | 7_4:-49861987 | None:intergenic |
| TCCTTGAGGCCATATGATTT+TGG | 0.205239 | 7_4:-49861660 | None:intergenic |
| CTCAAGGAAATGATCGTTTC+TGG | 0.227781 | 7_4:+49861675 | Msa1160090:CDS |
| CTTTGTGACAATGTTATCTT+TGG | 0.236841 | 7_4:+49861482 | Msa1160090:CDS |
| TGACATCCAAGCATAGTTAA+TGG | 0.255056 | 7_4:-49861629 | None:intergenic |
| GATGAGAATGATTTGGGATT+AGG | 0.286101 | 7_4:+49862127 | Msa1160090:CDS |
| CTTGAAATTAATTCCACAAT+AGG | 0.286246 | 7_4:-49862680 | None:intergenic |
| CATCAGCTAAATAATGTAAA+TGG | 0.302145 | 7_4:+49862184 | Msa1160090:CDS |
| TCCTCATTCACAAGCTCTTC+TGG | 0.302834 | 7_4:-49862562 | None:intergenic |
| TAGGCTTCCATGCGTGAAAT+AGG | 0.309671 | 7_4:-49862661 | None:intergenic |
| GATATCGAAAGATTCATATA+AGG | 0.313050 | 7_4:-49861600 | None:intergenic |
| ACACCATCCTCTTGGCTATA+TGG | 0.326111 | 7_4:-49862009 | None:intergenic |
| AGAGATGGATGAGAATGATT+TGG | 0.332780 | 7_4:+49862120 | Msa1160090:CDS |
| AAGGAGTACTCCAAATTGTT+TGG | 0.335368 | 7_4:+49861977 | Msa1160090:CDS |
| TCCTCCTTTGTTGTCTTAGC+AGG | 0.355615 | 7_4:+49862259 | Msa1160090:CDS |
| GAGATGGATGAGAATGATTT+GGG | 0.356471 | 7_4:+49862121 | Msa1160090:CDS |
| TTATCTTCGTTTCTCTCTAA+AGG | 0.363836 | 7_4:+49862624 | Msa1160090:CDS |
| CAAGCATAGTTAATGGATCT+TGG | 0.392821 | 7_4:-49861622 | None:intergenic |
| AGAATTCTTCAAGCTCCCTT+TGG | 0.396656 | 7_4:+49861511 | Msa1160090:CDS |
| TGATTCATTCATATTGTTGA+AGG | 0.421437 | 7_4:-49862703 | None:intergenic |
| CTGATGTAATACAGATATAA+TGG | 0.431837 | 7_4:-49862167 | None:intergenic |
| TGATTACAGCGAAAGCTTCA+AGG | 0.440544 | 7_4:+49861958 | Msa1160090:intron |
| CAAGATCCATTAACTATGCT+TGG | 0.444301 | 7_4:+49861623 | Msa1160090:CDS |
| ATATCGAAAGATTCATATAA+GGG | 0.457116 | 7_4:-49861599 | None:intergenic |
| AAATATTCACCAAAATCATA+TGG | 0.463691 | 7_4:+49861651 | Msa1160090:CDS |
| TCAAACAATTATCTCATTCG+AGG | 0.465490 | 7_4:+49862079 | Msa1160090:CDS |
| TAATCGTAATTGTCGAATGT+TGG | 0.466395 | 7_4:-49862604 | None:intergenic |
| GAGACCCATGTGTCAGTACC+AGG | 0.471825 | 7_4:-49861383 | None:intergenic |
| TCATTCTCATCCATCTCTCT+TGG | 0.489033 | 7_4:-49862115 | None:intergenic |
| CTTAGCAGGTGACGCATTCA+CGG | 0.492976 | 7_4:+49862273 | Msa1160090:CDS |
| ACCAGAAGAGCTTGTGAATG+AGG | 0.501087 | 7_4:+49862561 | Msa1160090:CDS |
| AAGACTTCACTGGAAGACTA+TGG | 0.505484 | 7_4:+49861422 | Msa1160090:CDS |
| GTAGCACACTATGATAAAGT+TGG | 0.506225 | 7_4:+49861452 | Msa1160090:CDS |
| TGGTTGGACAAGTCAACGAC+AGG | 0.507716 | 7_4:-49861350 | None:intergenic |
| TAATGTTGTGAAGACTTCAC+TGG | 0.510080 | 7_4:+49861412 | Msa1160090:CDS |
| GCTCTCAAACACCATCCTCT+TGG | 0.513795 | 7_4:-49862017 | None:intergenic |
| GAATGTTGGTTTAAAACGCA+AGG | 0.542704 | 7_4:-49862590 | None:intergenic |
| ACCAAAATCATATGGCCTCA+AGG | 0.544014 | 7_4:+49861659 | Msa1160090:CDS |
| AGACCTTTCCATGGCTACAC+AGG | 0.545849 | 7_4:+49861560 | Msa1160090:CDS |
| TCACGCATGGAAGCCTATTG+TGG | 0.551906 | 7_4:+49862667 | Msa1160090:CDS |
| TGGTGAATGGACTGAGGTTG+AGG | 0.559321 | 7_4:+49862228 | Msa1160090:CDS |
| GAAAGAACCTATTTCACGCA+TGG | 0.566650 | 7_4:+49862654 | Msa1160090:CDS |
| ACGAAAACAAGATACTCAGC+TGG | 0.581961 | 7_4:+49862505 | Msa1160090:CDS |
| TGAAACCTGGTACTGACACA+TGG | 0.585719 | 7_4:+49861378 | Msa1160090:CDS |
| AGAGTTGTCCTGTGTAGCCA+TGG | 0.598382 | 7_4:-49861568 | None:intergenic |
| TCCAACCAAAACATGAAACC+TGG | 0.600317 | 7_4:+49861365 | Msa1160090:CDS |
| GACAACAAAGGAGGAAGGTG+AGG | 0.605347 | 7_4:-49862251 | None:intergenic |
| GCTAGATATGGAGTAACGGA+AGG | 0.611665 | 7_4:+49862446 | Msa1160090:intron |
| GAAATACAGACCAAGAGAGA+TGG | 0.611718 | 7_4:+49862105 | Msa1160090:CDS |
| TGTCCTGTGTAGCCATGGAA+AGG | 0.619892 | 7_4:-49861563 | None:intergenic |
| AGGATGGTGTTTGAGAGCTA+TGG | 0.620143 | 7_4:+49862022 | Msa1160090:CDS |
| AATGTTGGTTTAAAACGCAA+GGG | 0.621011 | 7_4:-49862589 | None:intergenic |
| ATTTGCTAGATATGGAGTAA+CGG | 0.622192 | 7_4:+49862442 | Msa1160090:intron |
| ATAATGGTCAAGTCTGAATG+AGG | 0.623723 | 7_4:-49862151 | None:intergenic |
| ATAAGTGATAGACCTTTCCA+TGG | 0.632144 | 7_4:+49861551 | Msa1160090:CDS |
| GAAACCTGGTACTGACACAT+GGG | 0.636146 | 7_4:+49861379 | Msa1160090:CDS |
| AGACCATATAGCCAAGAGGA+TGG | 0.645865 | 7_4:+49862006 | Msa1160090:CDS |
| GCTAAGACAACAAAGGAGGA+AGG | 0.646880 | 7_4:-49862256 | None:intergenic |
| CAGAAACGATCATTTCCTTG+AGG | 0.669988 | 7_4:-49861674 | None:intergenic |
| ACCTGCTAAGACAACAAAGG+AGG | 0.674762 | 7_4:-49862260 | None:intergenic |
| GGTTGGACAAGTCAACGACA+GGG | 0.686695 | 7_4:-49861349 | None:intergenic |
| AATTAGACCATATAGCCAAG+AGG | 0.706366 | 7_4:+49862002 | Msa1160090:CDS |
| GTCACCTGCTAAGACAACAA+AGG | 0.733687 | 7_4:-49862263 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAATAAATATATATTTTGA+TGG | - | chr7_4:49861914-49861933 | None:intergenic | 10.0% |
| !!! | ATTTATTGATTATAAATGAT+AGG | + | chr7_4:49861925-49861944 | Msa1160090:intron | 10.0% |
| !!! | TCAATAAATATATATTTTGA+TGG | - | chr7_4:49861914-49861933 | None:intergenic | 10.0% |
| !!! | ATTTATTGATTATAAATGAT+AGG | + | chr7_4:49861925-49861944 | Msa1160090:intron | 10.0% |
| !! | TGTTTATGATTAAGAATTTA+TGG | - | chr7_4:49862307-49862326 | None:intergenic | 15.0% |
| !! | TCTTAATCATAAACATTAAT+TGG | + | chr7_4:49862312-49862331 | Msa1160090:intron | 15.0% |
| !! | TGTTTATGATTAAGAATTTA+TGG | - | chr7_4:49862307-49862326 | None:intergenic | 15.0% |
| !! | TCTTAATCATAAACATTAAT+TGG | + | chr7_4:49862312-49862331 | Msa1160090:intron | 15.0% |
| !! | ATATCGAAAGATTCATATAA+GGG | - | chr7_4:49861602-49861621 | None:intergenic | 20.0% |
| !! | AAATATTCACCAAAATCATA+TGG | + | chr7_4:49861651-49861670 | Msa1160090:CDS | 20.0% |
| !! | TTGCAAATCAAATTGAAAAA+TGG | + | chr7_4:49862208-49862227 | Msa1160090:CDS | 20.0% |
| !!! | GGTCTAAAAAATAATTGTTT+TGG | + | chr7_4:49862333-49862352 | Msa1160090:intron | 20.0% |
| !!! | TATTTTTCATTTGCTAGATA+TGG | + | chr7_4:49862434-49862453 | Msa1160090:intron | 20.0% |
| !! | ATATCGAAAGATTCATATAA+GGG | - | chr7_4:49861602-49861621 | None:intergenic | 20.0% |
| !! | AAATATTCACCAAAATCATA+TGG | + | chr7_4:49861651-49861670 | Msa1160090:CDS | 20.0% |
| !! | TTGCAAATCAAATTGAAAAA+TGG | + | chr7_4:49862208-49862227 | Msa1160090:CDS | 20.0% |
| !!! | GGTCTAAAAAATAATTGTTT+TGG | + | chr7_4:49862333-49862352 | Msa1160090:intron | 20.0% |
| !!! | TATTTTTCATTTGCTAGATA+TGG | + | chr7_4:49862434-49862453 | Msa1160090:intron | 20.0% |
| ! | GATATCGAAAGATTCATATA+AGG | - | chr7_4:49861603-49861622 | None:intergenic | 25.0% |
| ! | TGCTTCATGAATCTATATTA+TGG | - | chr7_4:49861715-49861734 | None:intergenic | 25.0% |
| ! | TCTCAAATTATTAGTGATGT+CGG | + | chr7_4:49861835-49861854 | Msa1160090:intron | 25.0% |
| ! | CTGATGTAATACAGATATAA+TGG | - | chr7_4:49862170-49862189 | None:intergenic | 25.0% |
| ! | CATCAGCTAAATAATGTAAA+TGG | + | chr7_4:49862184-49862203 | Msa1160090:CDS | 25.0% |
| ! | TCAAATTGAAAAATGGTGAA+TGG | + | chr7_4:49862215-49862234 | Msa1160090:CDS | 25.0% |
| ! | TCATCTAAACATTGTTGAAT+TGG | - | chr7_4:49862360-49862379 | None:intergenic | 25.0% |
| !! | TGTCTCTTCTAATTTAACTT+AGG | + | chr7_4:49862390-49862409 | Msa1160090:intron | 25.0% |
| !! | TTCTTTTGCTAGTAAGATTA+TGG | + | chr7_4:49862534-49862553 | Msa1160090:CDS | 25.0% |
| ! | CTTGAAATTAATTCCACAAT+AGG | - | chr7_4:49862683-49862702 | None:intergenic | 25.0% |
| ! | GATATCGAAAGATTCATATA+AGG | - | chr7_4:49861603-49861622 | None:intergenic | 25.0% |
| ! | TGCTTCATGAATCTATATTA+TGG | - | chr7_4:49861715-49861734 | None:intergenic | 25.0% |
| ! | TCTCAAATTATTAGTGATGT+CGG | + | chr7_4:49861835-49861854 | Msa1160090:intron | 25.0% |
| ! | CTGATGTAATACAGATATAA+TGG | - | chr7_4:49862170-49862189 | None:intergenic | 25.0% |
| ! | CATCAGCTAAATAATGTAAA+TGG | + | chr7_4:49862184-49862203 | Msa1160090:CDS | 25.0% |
| ! | TCAAATTGAAAAATGGTGAA+TGG | + | chr7_4:49862215-49862234 | Msa1160090:CDS | 25.0% |
| ! | TCATCTAAACATTGTTGAAT+TGG | - | chr7_4:49862360-49862379 | None:intergenic | 25.0% |
| !! | TGTCTCTTCTAATTTAACTT+AGG | + | chr7_4:49862390-49862409 | Msa1160090:intron | 25.0% |
| !! | TTCTTTTGCTAGTAAGATTA+TGG | + | chr7_4:49862534-49862553 | Msa1160090:CDS | 25.0% |
| ! | CTTGAAATTAATTCCACAAT+AGG | - | chr7_4:49862683-49862702 | None:intergenic | 25.0% |
| CTTTGTGACAATGTTATCTT+TGG | + | chr7_4:49861482-49861501 | Msa1160090:CDS | 30.0% | |
| AGATAAGAGAATATGAAGCA+CGG | - | chr7_4:49861884-49861903 | None:intergenic | 30.0% | |
| GTCTAATTCTCCAAACAATT+TGG | - | chr7_4:49861990-49862009 | None:intergenic | 30.0% | |
| TCAAACAATTATCTCATTCG+AGG | + | chr7_4:49862079-49862098 | Msa1160090:CDS | 30.0% | |
| ! | ATTTGCTAGATATGGAGTAA+CGG | + | chr7_4:49862442-49862461 | Msa1160090:intron | 30.0% |
| !! | AATGTTGGTTTAAAACGCAA+GGG | - | chr7_4:49862592-49862611 | None:intergenic | 30.0% |
| TAATCGTAATTGTCGAATGT+TGG | - | chr7_4:49862607-49862626 | None:intergenic | 30.0% | |
| TTATCTTCGTTTCTCTCTAA+AGG | + | chr7_4:49862624-49862643 | Msa1160090:CDS | 30.0% | |
| CTTTGTGACAATGTTATCTT+TGG | + | chr7_4:49861482-49861501 | Msa1160090:CDS | 30.0% | |
| AGATAAGAGAATATGAAGCA+CGG | - | chr7_4:49861884-49861903 | None:intergenic | 30.0% | |
| GTCTAATTCTCCAAACAATT+TGG | - | chr7_4:49861990-49862009 | None:intergenic | 30.0% | |
| TCAAACAATTATCTCATTCG+AGG | + | chr7_4:49862079-49862098 | Msa1160090:CDS | 30.0% | |
| ! | ATTTGCTAGATATGGAGTAA+CGG | + | chr7_4:49862442-49862461 | Msa1160090:intron | 30.0% |
| !! | AATGTTGGTTTAAAACGCAA+GGG | - | chr7_4:49862592-49862611 | None:intergenic | 30.0% |
| TAATCGTAATTGTCGAATGT+TGG | - | chr7_4:49862607-49862626 | None:intergenic | 30.0% | |
| TTATCTTCGTTTCTCTCTAA+AGG | + | chr7_4:49862624-49862643 | Msa1160090:CDS | 30.0% | |
| TAATGTTGTGAAGACTTCAC+TGG | + | chr7_4:49861412-49861431 | Msa1160090:CDS | 35.0% | |
| GTAGCACACTATGATAAAGT+TGG | + | chr7_4:49861452-49861471 | Msa1160090:CDS | 35.0% | |
| !! | TTTGCGCTTTTGTTTCCAAA+GGG | - | chr7_4:49861529-49861548 | None:intergenic | 35.0% |
| !! | TTTTGCGCTTTTGTTTCCAA+AGG | - | chr7_4:49861530-49861549 | None:intergenic | 35.0% |
| ATAAGTGATAGACCTTTCCA+TGG | + | chr7_4:49861551-49861570 | Msa1160090:CDS | 35.0% | |
| ! | CAAGCATAGTTAATGGATCT+TGG | - | chr7_4:49861625-49861644 | None:intergenic | 35.0% |
| CAAGATCCATTAACTATGCT+TGG | + | chr7_4:49861623-49861642 | Msa1160090:CDS | 35.0% | |
| TGACATCCAAGCATAGTTAA+TGG | - | chr7_4:49861632-49861651 | None:intergenic | 35.0% | |
| !! | AAGGAGTACTCCAAATTGTT+TGG | + | chr7_4:49861977-49861996 | Msa1160090:CDS | 35.0% |
| AATTAGACCATATAGCCAAG+AGG | + | chr7_4:49862002-49862021 | Msa1160090:CDS | 35.0% | |
| AGAGATGGATGAGAATGATT+TGG | + | chr7_4:49862120-49862139 | Msa1160090:CDS | 35.0% | |
| GAGATGGATGAGAATGATTT+GGG | + | chr7_4:49862121-49862140 | Msa1160090:CDS | 35.0% | |
| ! | GATGAGAATGATTTGGGATT+AGG | + | chr7_4:49862127-49862146 | Msa1160090:CDS | 35.0% |
| ATAATGGTCAAGTCTGAATG+AGG | - | chr7_4:49862154-49862173 | None:intergenic | 35.0% | |
| !! | GAATGTTGGTTTAAAACGCA+AGG | - | chr7_4:49862593-49862612 | None:intergenic | 35.0% |
| TAATGTTGTGAAGACTTCAC+TGG | + | chr7_4:49861412-49861431 | Msa1160090:CDS | 35.0% | |
| GTAGCACACTATGATAAAGT+TGG | + | chr7_4:49861452-49861471 | Msa1160090:CDS | 35.0% | |
| !! | TTTGCGCTTTTGTTTCCAAA+GGG | - | chr7_4:49861529-49861548 | None:intergenic | 35.0% |
| !! | TTTTGCGCTTTTGTTTCCAA+AGG | - | chr7_4:49861530-49861549 | None:intergenic | 35.0% |
| ATAAGTGATAGACCTTTCCA+TGG | + | chr7_4:49861551-49861570 | Msa1160090:CDS | 35.0% | |
| ! | CAAGCATAGTTAATGGATCT+TGG | - | chr7_4:49861625-49861644 | None:intergenic | 35.0% |
| CAAGATCCATTAACTATGCT+TGG | + | chr7_4:49861623-49861642 | Msa1160090:CDS | 35.0% | |
| TGACATCCAAGCATAGTTAA+TGG | - | chr7_4:49861632-49861651 | None:intergenic | 35.0% | |
| !! | AAGGAGTACTCCAAATTGTT+TGG | + | chr7_4:49861977-49861996 | Msa1160090:CDS | 35.0% |
| AATTAGACCATATAGCCAAG+AGG | + | chr7_4:49862002-49862021 | Msa1160090:CDS | 35.0% | |
| AGAGATGGATGAGAATGATT+TGG | + | chr7_4:49862120-49862139 | Msa1160090:CDS | 35.0% | |
| GAGATGGATGAGAATGATTT+GGG | + | chr7_4:49862121-49862140 | Msa1160090:CDS | 35.0% | |
| ! | GATGAGAATGATTTGGGATT+AGG | + | chr7_4:49862127-49862146 | Msa1160090:CDS | 35.0% |
| ATAATGGTCAAGTCTGAATG+AGG | - | chr7_4:49862154-49862173 | None:intergenic | 35.0% | |
| !! | GAATGTTGGTTTAAAACGCA+AGG | - | chr7_4:49862593-49862612 | None:intergenic | 35.0% |
| TCCAACCAAAACATGAAACC+TGG | + | chr7_4:49861365-49861384 | Msa1160090:CDS | 40.0% | |
| !!! | ACCAGGTTTCATGTTTTGGT+TGG | - | chr7_4:49861369-49861388 | None:intergenic | 40.0% |
| ! | CAGTACCAGGTTTCATGTTT+TGG | - | chr7_4:49861373-49861392 | None:intergenic | 40.0% |
| AAGACTTCACTGGAAGACTA+TGG | + | chr7_4:49861422-49861441 | Msa1160090:CDS | 40.0% | |
| AGAATTCTTCAAGCTCCCTT+TGG | + | chr7_4:49861511-49861530 | Msa1160090:CDS | 40.0% | |
| ACCAAAATCATATGGCCTCA+AGG | + | chr7_4:49861659-49861678 | Msa1160090:CDS | 40.0% | |
| ! | TCCTTGAGGCCATATGATTT+TGG | - | chr7_4:49861663-49861682 | None:intergenic | 40.0% |
| CAGAAACGATCATTTCCTTG+AGG | - | chr7_4:49861677-49861696 | None:intergenic | 40.0% | |
| CTCAAGGAAATGATCGTTTC+TGG | + | chr7_4:49861675-49861694 | Msa1160090:CDS | 40.0% | |
| !! | AGGAAATGATCGTTTCTGGT+TGG | + | chr7_4:49861679-49861698 | Msa1160090:intron | 40.0% |
| TGATTACAGCGAAAGCTTCA+AGG | + | chr7_4:49861958-49861977 | Msa1160090:intron | 40.0% | |
| GAAATACAGACCAAGAGAGA+TGG | + | chr7_4:49862105-49862124 | Msa1160090:CDS | 40.0% | |
| TCATTCTCATCCATCTCTCT+TGG | - | chr7_4:49862118-49862137 | None:intergenic | 40.0% | |
| !! | GAAAAATGGTGAATGGACTG+AGG | + | chr7_4:49862222-49862241 | Msa1160090:CDS | 40.0% |
| ACGAAAACAAGATACTCAGC+TGG | + | chr7_4:49862505-49862524 | Msa1160090:CDS | 40.0% | |
| GAAAGAACCTATTTCACGCA+TGG | + | chr7_4:49862654-49862673 | Msa1160090:CDS | 40.0% | |
| TCCAACCAAAACATGAAACC+TGG | + | chr7_4:49861365-49861384 | Msa1160090:CDS | 40.0% | |
| !!! | ACCAGGTTTCATGTTTTGGT+TGG | - | chr7_4:49861369-49861388 | None:intergenic | 40.0% |
| ! | CAGTACCAGGTTTCATGTTT+TGG | - | chr7_4:49861373-49861392 | None:intergenic | 40.0% |
| AAGACTTCACTGGAAGACTA+TGG | + | chr7_4:49861422-49861441 | Msa1160090:CDS | 40.0% | |
| AGAATTCTTCAAGCTCCCTT+TGG | + | chr7_4:49861511-49861530 | Msa1160090:CDS | 40.0% | |
| ACCAAAATCATATGGCCTCA+AGG | + | chr7_4:49861659-49861678 | Msa1160090:CDS | 40.0% | |
| ! | TCCTTGAGGCCATATGATTT+TGG | - | chr7_4:49861663-49861682 | None:intergenic | 40.0% |
| CAGAAACGATCATTTCCTTG+AGG | - | chr7_4:49861677-49861696 | None:intergenic | 40.0% | |
| CTCAAGGAAATGATCGTTTC+TGG | + | chr7_4:49861675-49861694 | Msa1160090:CDS | 40.0% | |
| !! | AGGAAATGATCGTTTCTGGT+TGG | + | chr7_4:49861679-49861698 | Msa1160090:intron | 40.0% |
| TGATTACAGCGAAAGCTTCA+AGG | + | chr7_4:49861958-49861977 | Msa1160090:intron | 40.0% | |
| GAAATACAGACCAAGAGAGA+TGG | + | chr7_4:49862105-49862124 | Msa1160090:CDS | 40.0% | |
| TCATTCTCATCCATCTCTCT+TGG | - | chr7_4:49862118-49862137 | None:intergenic | 40.0% | |
| !! | GAAAAATGGTGAATGGACTG+AGG | + | chr7_4:49862222-49862241 | Msa1160090:CDS | 40.0% |
| ACGAAAACAAGATACTCAGC+TGG | + | chr7_4:49862505-49862524 | Msa1160090:CDS | 40.0% | |
| GAAAGAACCTATTTCACGCA+TGG | + | chr7_4:49862654-49862673 | Msa1160090:CDS | 40.0% | |
| !! | TGAAACCTGGTACTGACACA+TGG | + | chr7_4:49861378-49861397 | Msa1160090:CDS | 45.0% |
| !! | GAAACCTGGTACTGACACAT+GGG | + | chr7_4:49861379-49861398 | Msa1160090:CDS | 45.0% |
| AGACCATATAGCCAAGAGGA+TGG | + | chr7_4:49862006-49862025 | Msa1160090:CDS | 45.0% | |
| ACACCATCCTCTTGGCTATA+TGG | - | chr7_4:49862012-49862031 | None:intergenic | 45.0% | |
| AGGATGGTGTTTGAGAGCTA+TGG | + | chr7_4:49862022-49862041 | Msa1160090:CDS | 45.0% | |
| GCTAAGACAACAAAGGAGGA+AGG | - | chr7_4:49862259-49862278 | None:intergenic | 45.0% | |
| ! | TCCTCCTTTGTTGTCTTAGC+AGG | + | chr7_4:49862259-49862278 | Msa1160090:CDS | 45.0% |
| ACCTGCTAAGACAACAAAGG+AGG | - | chr7_4:49862263-49862282 | None:intergenic | 45.0% | |
| GTCACCTGCTAAGACAACAA+AGG | - | chr7_4:49862266-49862285 | None:intergenic | 45.0% | |
| ! | GCTAGATATGGAGTAACGGA+AGG | + | chr7_4:49862446-49862465 | Msa1160090:intron | 45.0% |
| ACCAGAAGAGCTTGTGAATG+AGG | + | chr7_4:49862561-49862580 | Msa1160090:CDS | 45.0% | |
| TCCTCATTCACAAGCTCTTC+TGG | - | chr7_4:49862565-49862584 | None:intergenic | 45.0% | |
| TAGGCTTCCATGCGTGAAAT+AGG | - | chr7_4:49862664-49862683 | None:intergenic | 45.0% | |
| !! | TGAAACCTGGTACTGACACA+TGG | + | chr7_4:49861378-49861397 | Msa1160090:CDS | 45.0% |
| !! | GAAACCTGGTACTGACACAT+GGG | + | chr7_4:49861379-49861398 | Msa1160090:CDS | 45.0% |
| AGACCATATAGCCAAGAGGA+TGG | + | chr7_4:49862006-49862025 | Msa1160090:CDS | 45.0% | |
| ACACCATCCTCTTGGCTATA+TGG | - | chr7_4:49862012-49862031 | None:intergenic | 45.0% | |
| AGGATGGTGTTTGAGAGCTA+TGG | + | chr7_4:49862022-49862041 | Msa1160090:CDS | 45.0% | |
| GCTAAGACAACAAAGGAGGA+AGG | - | chr7_4:49862259-49862278 | None:intergenic | 45.0% | |
| ! | TCCTCCTTTGTTGTCTTAGC+AGG | + | chr7_4:49862259-49862278 | Msa1160090:CDS | 45.0% |
| ACCTGCTAAGACAACAAAGG+AGG | - | chr7_4:49862263-49862282 | None:intergenic | 45.0% | |
| GTCACCTGCTAAGACAACAA+AGG | - | chr7_4:49862266-49862285 | None:intergenic | 45.0% | |
| ! | GCTAGATATGGAGTAACGGA+AGG | + | chr7_4:49862446-49862465 | Msa1160090:intron | 45.0% |
| ACCAGAAGAGCTTGTGAATG+AGG | + | chr7_4:49862561-49862580 | Msa1160090:CDS | 45.0% | |
| TCCTCATTCACAAGCTCTTC+TGG | - | chr7_4:49862565-49862584 | None:intergenic | 45.0% | |
| TAGGCTTCCATGCGTGAAAT+AGG | - | chr7_4:49862664-49862683 | None:intergenic | 45.0% | |
| GGTTGGACAAGTCAACGACA+GGG | - | chr7_4:49861352-49861371 | None:intergenic | 50.0% | |
| TGGTTGGACAAGTCAACGAC+AGG | - | chr7_4:49861353-49861372 | None:intergenic | 50.0% | |
| AGACCTTTCCATGGCTACAC+AGG | + | chr7_4:49861560-49861579 | Msa1160090:CDS | 50.0% | |
| TGTCCTGTGTAGCCATGGAA+AGG | - | chr7_4:49861566-49861585 | None:intergenic | 50.0% | |
| AGAGTTGTCCTGTGTAGCCA+TGG | - | chr7_4:49861571-49861590 | None:intergenic | 50.0% | |
| CATGAAGCACAGACACTCCT+CGG | + | chr7_4:49861726-49861745 | Msa1160090:intron | 50.0% | |
| ! | TCCTCGGATTAGACATGTCC+CGG | + | chr7_4:49861742-49861761 | Msa1160090:intron | 50.0% |
| ACACAACACGTGTCTGACAC+CGG | - | chr7_4:49861764-49861783 | None:intergenic | 50.0% | |
| GCTCTCAAACACCATCCTCT+TGG | - | chr7_4:49862020-49862039 | None:intergenic | 50.0% | |
| !! | TGGTGAATGGACTGAGGTTG+AGG | + | chr7_4:49862228-49862247 | Msa1160090:CDS | 50.0% |
| GACAACAAAGGAGGAAGGTG+AGG | - | chr7_4:49862254-49862273 | None:intergenic | 50.0% | |
| CTTAGCAGGTGACGCATTCA+CGG | + | chr7_4:49862273-49862292 | Msa1160090:CDS | 50.0% | |
| TCACGCATGGAAGCCTATTG+TGG | + | chr7_4:49862667-49862686 | Msa1160090:CDS | 50.0% | |
| GGTTGGACAAGTCAACGACA+GGG | - | chr7_4:49861352-49861371 | None:intergenic | 50.0% | |
| TGGTTGGACAAGTCAACGAC+AGG | - | chr7_4:49861353-49861372 | None:intergenic | 50.0% | |
| AGACCTTTCCATGGCTACAC+AGG | + | chr7_4:49861560-49861579 | Msa1160090:CDS | 50.0% | |
| TGTCCTGTGTAGCCATGGAA+AGG | - | chr7_4:49861566-49861585 | None:intergenic | 50.0% | |
| AGAGTTGTCCTGTGTAGCCA+TGG | - | chr7_4:49861571-49861590 | None:intergenic | 50.0% | |
| CATGAAGCACAGACACTCCT+CGG | + | chr7_4:49861726-49861745 | Msa1160090:intron | 50.0% | |
| ! | TCCTCGGATTAGACATGTCC+CGG | + | chr7_4:49861742-49861761 | Msa1160090:intron | 50.0% |
| ACACAACACGTGTCTGACAC+CGG | - | chr7_4:49861764-49861783 | None:intergenic | 50.0% | |
| GCTCTCAAACACCATCCTCT+TGG | - | chr7_4:49862020-49862039 | None:intergenic | 50.0% | |
| !! | TGGTGAATGGACTGAGGTTG+AGG | + | chr7_4:49862228-49862247 | Msa1160090:CDS | 50.0% |
| GACAACAAAGGAGGAAGGTG+AGG | - | chr7_4:49862254-49862273 | None:intergenic | 50.0% | |
| CTTAGCAGGTGACGCATTCA+CGG | + | chr7_4:49862273-49862292 | Msa1160090:CDS | 50.0% | |
| TCACGCATGGAAGCCTATTG+TGG | + | chr7_4:49862667-49862686 | Msa1160090:CDS | 50.0% | |
| GAGACCCATGTGTCAGTACC+AGG | - | chr7_4:49861386-49861405 | None:intergenic | 55.0% | |
| ACCGGGACATGTCTAATCCG+AGG | - | chr7_4:49861746-49861765 | None:intergenic | 55.0% | |
| CACAACACGTGTCTGACACC+GGG | - | chr7_4:49861763-49861782 | None:intergenic | 55.0% | |
| GAGACCCATGTGTCAGTACC+AGG | - | chr7_4:49861386-49861405 | None:intergenic | 55.0% | |
| ACCGGGACATGTCTAATCCG+AGG | - | chr7_4:49861746-49861765 | None:intergenic | 55.0% | |
| CACAACACGTGTCTGACACC+GGG | - | chr7_4:49861763-49861782 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 49861320 | 49862717 | 49861320 | ID=Msa1160090;Name=Msa1160090 |
| chr7_4 | mRNA | 49861320 | 49862717 | 49861320 | ID=Msa1160090-mRNA-1;Parent=Msa1160090;Name=Msa1160090-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|1|1|1|3|0|323 |
| chr7_4 | exon | 49861320 | 49861696 | 49861320 | ID=Msa1160090-mRNA-1:exon:13808;Parent=Msa1160090-mRNA-1 |
| chr7_4 | exon | 49861967 | 49862294 | 49861967 | ID=Msa1160090-mRNA-1:exon:13809;Parent=Msa1160090-mRNA-1 |
| chr7_4 | exon | 49862451 | 49862717 | 49862451 | ID=Msa1160090-mRNA-1:exon:13810;Parent=Msa1160090-mRNA-1 |
| chr7_4 | CDS | 49861320 | 49861696 | 49861320 | ID=Msa1160090-mRNA-1:cds;Parent=Msa1160090-mRNA-1 |
| chr7_4 | CDS | 49861967 | 49862294 | 49861967 | ID=Msa1160090-mRNA-1:cds;Parent=Msa1160090-mRNA-1 |
| chr7_4 | CDS | 49862451 | 49862717 | 49862451 | ID=Msa1160090-mRNA-1:cds;Parent=Msa1160090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
