Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161410 | XP_003624869.1 | 94.737 | 304 | 9 | 2 | 1 | 304 | 1 | 297 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161410 | sp|Q8GUU2|RIE1_ARATH | 42.568 | 296 | 123 | 7 | 42 | 302 | 73 | 356 | 7.80e-78 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161410 | G7L4S3 | 94.737 | 304 | 9 | 2 | 1 | 304 | 1 | 297 | 0.0 | 588 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1161410 | Msa1317810 | 0.805380 | 1.372845e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161410 | MtrunA17_Chr7g0255261 | 94.737 | 304 | 9 | 2 | 1 | 304 | 1 | 297 | 0.0 | 588 |
| Msa1161410 | MtrunA17_Chr7g0255321 | 76.884 | 199 | 34 | 3 | 114 | 304 | 100 | 294 | 5.42e-100 | 295 |
| Msa1161410 | MtrunA17_Chr7g0255331 | 71.429 | 196 | 50 | 3 | 114 | 304 | 104 | 298 | 6.35e-91 | 272 |
| Msa1161410 | MtrunA17_Chr8g0391751 | 43.403 | 288 | 134 | 4 | 42 | 304 | 53 | 336 | 6.64e-84 | 256 |
| Msa1161410 | MtrunA17_Chr1g0161291 | 44.816 | 299 | 117 | 4 | 42 | 304 | 64 | 350 | 1.40e-83 | 255 |
| Msa1161410 | MtrunA17_Chr4g0057351 | 39.873 | 316 | 151 | 5 | 25 | 302 | 51 | 365 | 8.97e-81 | 249 |
| Msa1161410 | MtrunA17_Chr5g0397921 | 40.594 | 303 | 140 | 3 | 41 | 303 | 80 | 382 | 5.93e-69 | 219 |
| Msa1161410 | MtrunA17_Chr7g0246571 | 37.838 | 296 | 143 | 5 | 41 | 302 | 73 | 361 | 7.75e-58 | 190 |
| Msa1161410 | MtrunA17_Chr3g0102761 | 30.040 | 253 | 135 | 8 | 70 | 299 | 100 | 333 | 4.30e-28 | 110 |
| Msa1161410 | MtrunA17_Chr3g0138451 | 26.645 | 304 | 153 | 8 | 50 | 297 | 72 | 361 | 6.42e-27 | 108 |
| Msa1161410 | MtrunA17_Chr1g0148631 | 26.608 | 342 | 184 | 8 | 13 | 297 | 54 | 385 | 1.63e-25 | 105 |
| Msa1161410 | MtrunA17_Chr5g0446921 | 25.735 | 272 | 159 | 7 | 55 | 299 | 85 | 340 | 2.17e-23 | 98.2 |
| Msa1161410 | MtrunA17_Chr1g0147951 | 58.696 | 46 | 19 | 0 | 249 | 294 | 424 | 469 | 6.49e-12 | 65.9 |
| Msa1161410 | MtrunA17_Chr4g0031911 | 31.933 | 119 | 60 | 3 | 189 | 297 | 146 | 253 | 7.47e-11 | 61.6 |
| Msa1161410 | MtrunA17_Chr3g0113811 | 45.098 | 51 | 27 | 1 | 249 | 298 | 102 | 152 | 8.00e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161410 | AT1G68070.1 | 45.878 | 279 | 130 | 3 | 42 | 301 | 64 | 340 | 4.72e-84 | 256 |
| Msa1161410 | AT2G01735.1 | 42.568 | 296 | 123 | 7 | 42 | 302 | 73 | 356 | 7.92e-79 | 244 |
| Msa1161410 | AT4G11680.1 | 41.447 | 304 | 143 | 6 | 25 | 299 | 87 | 384 | 5.12e-71 | 225 |
| Msa1161410 | AT3G61180.1 | 38.144 | 291 | 148 | 4 | 41 | 299 | 79 | 369 | 2.72e-69 | 220 |
| Msa1161410 | AT1G12760.2 | 39.571 | 326 | 150 | 6 | 25 | 303 | 7 | 332 | 2.34e-68 | 216 |
| Msa1161410 | AT1G12760.1 | 39.571 | 326 | 150 | 6 | 25 | 303 | 78 | 403 | 1.64e-67 | 216 |
| Msa1161410 | AT4G11680.2 | 37.838 | 333 | 143 | 7 | 25 | 299 | 87 | 413 | 5.69e-65 | 210 |
| Msa1161410 | AT1G63170.1 | 38.700 | 323 | 153 | 5 | 25 | 302 | 52 | 374 | 3.08e-58 | 191 |
| Msa1161410 | AT2G01735.2 | 43.503 | 177 | 75 | 4 | 42 | 193 | 73 | 249 | 2.38e-45 | 154 |
| Msa1161410 | AT4G32600.1 | 28.763 | 299 | 148 | 10 | 59 | 302 | 124 | 412 | 1.09e-30 | 120 |
| Msa1161410 | AT4G32600.2 | 28.763 | 299 | 148 | 10 | 59 | 302 | 124 | 412 | 1.09e-30 | 120 |
| Msa1161410 | AT1G80400.1 | 26.254 | 339 | 181 | 7 | 23 | 302 | 76 | 404 | 1.97e-30 | 119 |
| Msa1161410 | AT4G26580.1 | 26.715 | 277 | 154 | 7 | 43 | 297 | 84 | 333 | 1.68e-25 | 104 |
| Msa1161410 | AT4G26580.2 | 26.715 | 277 | 154 | 7 | 43 | 297 | 84 | 333 | 1.68e-25 | 104 |
| Msa1161410 | AT5G55970.2 | 29.197 | 274 | 147 | 8 | 51 | 299 | 92 | 343 | 4.29e-25 | 103 |
| Msa1161410 | AT5G55970.1 | 29.197 | 274 | 147 | 8 | 51 | 299 | 92 | 343 | 4.29e-25 | 103 |
Find 104 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCCTTATAATACAAATTA+AGG | 0.100136 | 7_4:+51617518 | None:intergenic |
| CCTTCTCTCATACTCCTTAC+AGG | 0.202409 | 7_4:-51620316 | Msa1161410:intron |
| GCATAAGCTAACGCTATTAT+TGG | 0.238231 | 7_4:+51618337 | None:intergenic |
| CGTTGTTGCTGTTCTTGTTC+AGG | 0.278936 | 7_4:+51620614 | None:intergenic |
| CAGCAAATTACCAAATGTTT+TGG | 0.291316 | 7_4:+51617698 | None:intergenic |
| TTAAGACAGAAACGAGGTTT+TGG | 0.331195 | 7_4:+51620696 | None:intergenic |
| CTTCCACTCCTCTCAGGTTA+TGG | 0.336412 | 7_4:-51620415 | Msa1161410:CDS |
| TGCCTTATAATACAAATTAA+GGG | 0.343622 | 7_4:+51617519 | None:intergenic |
| AATATAAGTAGAAAAGAAAA+AGG | 0.354234 | 7_4:-51617664 | Msa1161410:three_prime_UTR |
| CATGCATCAGCCGTTGGCTT+CGG | 0.377292 | 7_4:-51617852 | Msa1161410:CDS |
| CGATGAAAGGGGAGGGTGGT+AGG | 0.380376 | 7_4:+51620818 | None:intergenic |
| ATGTCCCACCCTTTCATCCT+TGG | 0.396080 | 7_4:-51617639 | Msa1161410:three_prime_UTR |
| AGAAATAATAGATAGATAGA+TGG | 0.400167 | 7_4:+51620732 | None:intergenic |
| ATTCTAAAGTTAGTTTATGA+TGG | 0.400570 | 7_4:-51617581 | Msa1161410:three_prime_UTR |
| TGATGCATGCACAATGAAAA+TGG | 0.405460 | 7_4:+51617866 | None:intergenic |
| CATAAGCTAACGCTATTATT+GGG | 0.414399 | 7_4:+51618338 | None:intergenic |
| TTTCGTTGATAAAGACTAGA+TGG | 0.418064 | 7_4:-51617767 | Msa1161410:three_prime_UTR |
| TCAGCTCACTTCCTATGTAT+AGG | 0.418493 | 7_4:-51618279 | Msa1161410:CDS |
| GATGATGCCAATGTGTTCAT+AGG | 0.419656 | 7_4:+51619501 | None:intergenic |
| CGTCTATTCAAGGGCGGTGT+TGG | 0.423221 | 7_4:-51620513 | Msa1161410:CDS |
| GTAGAGTGGTGGCGATGAAA+GGG | 0.423347 | 7_4:+51620806 | None:intergenic |
| TCAGTCAAATGTAATGGTTA+TGG | 0.423769 | 7_4:-51618251 | Msa1161410:CDS |
| GAAGAGATAGTTCACTGATA+TGG | 0.427406 | 7_4:+51618173 | None:intergenic |
| TGTTGGTGGTCGACATGGTC+TGG | 0.432214 | 7_4:-51620496 | Msa1161410:CDS |
| TGCCTATGTCCATATGTTGA+TGG | 0.440384 | 7_4:-51617919 | Msa1161410:CDS |
| TTTGTACTTACAGAATCATC+TGG | 0.445277 | 7_4:+51618148 | None:intergenic |
| GGGGTATATGTATATATTGT+AGG | 0.449927 | 7_4:-51617560 | Msa1161410:three_prime_UTR |
| GAATAGAGAACCAAAACATT+TGG | 0.451762 | 7_4:-51617708 | Msa1161410:three_prime_UTR |
| AGTAGAGTGGTGGCGATGAA+AGG | 0.452542 | 7_4:+51620805 | None:intergenic |
| TTCTAAAGTTAGTTTATGAT+GGG | 0.458687 | 7_4:-51617580 | Msa1161410:three_prime_UTR |
| ACGGAGCATGCGTCTATTCA+AGG | 0.462984 | 7_4:-51620523 | Msa1161410:CDS |
| GATGAAAGGGGAGGGTGGTA+GGG | 0.465508 | 7_4:+51620819 | None:intergenic |
| CTATTCAAGGGCGGTGTTGG+TGG | 0.474652 | 7_4:-51620510 | Msa1161410:CDS |
| AGCGTCCTTCCACTCCTCTC+AGG | 0.477539 | 7_4:-51620421 | Msa1161410:CDS |
| CATTGGCATCATCTGTTTGG+TGG | 0.478597 | 7_4:-51619491 | Msa1161410:CDS |
| ACTAAAATCCAAGGATGAAA+GGG | 0.480255 | 7_4:+51617631 | None:intergenic |
| ACACATTGGCATCATCTGTT+TGG | 0.481832 | 7_4:-51619494 | Msa1161410:CDS |
| AAGATTCTCCTCGTCTCTAC+TGG | 0.484730 | 7_4:-51619422 | Msa1161410:intron |
| CAATGAAAATGGTGGGTACA+TGG | 0.485098 | 7_4:+51617877 | None:intergenic |
| AGTTCGGTTCCATCAACATA+TGG | 0.485544 | 7_4:+51617910 | None:intergenic |
| ATTGGCATCATCTGTTTGGT+GGG | 0.488913 | 7_4:-51619490 | Msa1161410:CDS |
| AACTAAAATCCAAGGATGAA+AGG | 0.496798 | 7_4:+51617630 | None:intergenic |
| GTTTAGTCAGTCAAATGTAA+TGG | 0.497199 | 7_4:-51618257 | Msa1161410:CDS |
| ACGAAGTGTATCACTTGAAA+GGG | 0.497564 | 7_4:-51617737 | Msa1161410:three_prime_UTR |
| ACATGGAAGGCGGTAAAGTT+CGG | 0.498886 | 7_4:+51617894 | None:intergenic |
| GGAAGGACGCTCGGAGAAAG+TGG | 0.499572 | 7_4:+51620433 | None:intergenic |
| AACGAAGTGTATCACTTGAA+AGG | 0.499720 | 7_4:-51617738 | Msa1161410:three_prime_UTR |
| AGACCAATGTATCAGCTCTT+CGG | 0.503304 | 7_4:+51617794 | None:intergenic |
| ATTGTGCATGCATCAGCCGT+TGG | 0.513286 | 7_4:-51617858 | Msa1161410:CDS |
| CAACGCCAGGTCATCACTGT+TGG | 0.518264 | 7_4:-51620596 | Msa1161410:CDS |
| AGAAGAGAGATAAACCTGTA+AGG | 0.518555 | 7_4:+51620302 | None:intergenic |
| ATCGAGACATGCGGAGGAGA+GGG | 0.519499 | 7_4:+51620564 | None:intergenic |
| AAGAATCAGAGAAGGTGCTT+CGG | 0.520200 | 7_4:-51618311 | Msa1161410:CDS |
| GGCGGTGTTGGTGGTCGACA+TGG | 0.523622 | 7_4:-51620501 | Msa1161410:CDS |
| CAACTTGCTAAAGCAAGAAT+CGG | 0.525273 | 7_4:-51618211 | Msa1161410:CDS |
| TAGAGTGGTGGCGATGAAAG+GGG | 0.531328 | 7_4:+51620807 | None:intergenic |
| TATCCGAAGAGCTGATACAT+TGG | 0.538146 | 7_4:-51617797 | Msa1161410:CDS |
| TTTATATAAACTAAAATCCA+AGG | 0.548151 | 7_4:+51617622 | None:intergenic |
| ACAAGAACAGCAACAACGCC+AGG | 0.548755 | 7_4:-51620609 | Msa1161410:CDS |
| GAGAGGAGTGGAAGGACGCT+CGG | 0.554035 | 7_4:+51620424 | None:intergenic |
| AGTGGAGAGGATGACGGCGG+CGG | 0.554569 | 7_4:+51620451 | None:intergenic |
| GTGGCGATGAAAGGGGAGGG+TGG | 0.554812 | 7_4:+51620814 | None:intergenic |
| GCCTTATAATACAAATTAAG+GGG | 0.566629 | 7_4:+51617520 | None:intergenic |
| GATCGAGACATGCGGAGGAG+AGG | 0.567837 | 7_4:+51620563 | None:intergenic |
| TCTCCTCCGCATGTCTCGAT+CGG | 0.569444 | 7_4:-51620561 | Msa1161410:CDS |
| AGTGGTGGCGATGAAAGGGG+AGG | 0.579765 | 7_4:+51620810 | None:intergenic |
| CGAGGAGAATCTTCGAGAAG+TGG | 0.580489 | 7_4:+51619432 | None:intergenic |
| GAAAATGGTGGGTACATGGA+AGG | 0.583948 | 7_4:+51617881 | None:intergenic |
| CGGAGCATGCGTCTATTCAA+GGG | 0.585815 | 7_4:-51620522 | Msa1161410:CDS |
| AGTAATATGAGTTAGTAGAG+TGG | 0.588284 | 7_4:+51620792 | None:intergenic |
| TCTAAAGTTAGTTTATGATG+GGG | 0.588782 | 7_4:-51617579 | Msa1161410:three_prime_UTR |
| CATAACCTGAGAGGAGTGGA+AGG | 0.595212 | 7_4:+51620416 | None:intergenic |
| CCTCTCAGGTTATGGCTCTG+TGG | 0.597973 | 7_4:-51620407 | Msa1161410:CDS |
| AAAATCCAAGGATGAAAGGG+TGG | 0.599401 | 7_4:+51617634 | None:intergenic |
| GAGTTCCAACAGTGATGACC+TGG | 0.603663 | 7_4:+51620591 | None:intergenic |
| AATATGAGTTAGTAGAGTGG+TGG | 0.607447 | 7_4:+51620795 | None:intergenic |
| GAGAATCTTCGAGAAGTGGT+TGG | 0.614012 | 7_4:+51619436 | None:intergenic |
| GTGGTGGCGATGAAAGGGGA+GGG | 0.614402 | 7_4:+51620811 | None:intergenic |
| GAGCCATAACCTGAGAGGAG+TGG | 0.616053 | 7_4:+51620412 | None:intergenic |
| GGAGAAAGTGGAGAGGATGA+CGG | 0.619393 | 7_4:+51620445 | None:intergenic |
| TATATTGTAGGCCAGTCGTG+AGG | 0.619612 | 7_4:-51617548 | Msa1161410:three_prime_UTR |
| ATATTGTAGGCCAGTCGTGA+GGG | 0.622848 | 7_4:-51617547 | Msa1161410:three_prime_UTR |
| TTCCATCAACATATGGACAT+AGG | 0.626822 | 7_4:+51617917 | None:intergenic |
| CCTGTAAGGAGTATGAGAGA+AGG | 0.629941 | 7_4:+51620316 | None:intergenic |
| GTTAGAGCCTATGAACACAT+TGG | 0.635895 | 7_4:-51619508 | Msa1161410:CDS |
| GACTGACTAAACCTATACAT+AGG | 0.638771 | 7_4:+51618268 | None:intergenic |
| TATGCTTTAAGAATCAGAGA+AGG | 0.643881 | 7_4:-51618319 | Msa1161410:CDS |
| CCTTATAATACAAATTAAGG+GGG | 0.649328 | 7_4:+51617521 | None:intergenic |
| CGGATATTATATTTGCAGAG+CGG | 0.654671 | 7_4:+51617814 | None:intergenic |
| AAATCCAAGGATGAAAGGGT+GGG | 0.659598 | 7_4:+51617635 | None:intergenic |
| GACGCTCGGAGAAAGTGGAG+AGG | 0.665293 | 7_4:+51620438 | None:intergenic |
| ACATTCTTGCAGGTTAACCG+TGG | 0.665577 | 7_4:-51618443 | Msa1161410:intron |
| GACATGAAGAAGACACTCGA+AGG | 0.673141 | 7_4:+51620379 | None:intergenic |
| CCACAGAGCCATAACCTGAG+AGG | 0.674188 | 7_4:+51620407 | None:intergenic |
| TTATCTTACCAGTAGAGACG+AGG | 0.676574 | 7_4:+51619414 | None:intergenic |
| GCATGCACAATGAAAATGGT+GGG | 0.682025 | 7_4:+51617870 | None:intergenic |
| CGGCAACCACCACAAAAGCG+AGG | 0.695204 | 7_4:+51620471 | None:intergenic |
| TCGGAGAACGATGAAGACGA+CGG | 0.697384 | 7_4:-51620542 | Msa1161410:CDS |
| GTCAAAGGCTAGAAAGACCA+CGG | 0.708015 | 7_4:+51618426 | None:intergenic |
| AGCATGCGTCTATTCAAGGG+CGG | 0.709762 | 7_4:-51620519 | Msa1161410:CDS |
| AATGGTGGGTACATGGAAGG+CGG | 0.710710 | 7_4:+51617884 | None:intergenic |
| GAAAGTGGAGAGGATGACGG+CGG | 0.719103 | 7_4:+51620448 | None:intergenic |
| AGAGAATTAAGACAGAAACG+AGG | 0.728250 | 7_4:+51620690 | None:intergenic |
| TGCATGCACAATGAAAATGG+TGG | 0.740693 | 7_4:+51617869 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAATTAGTATGATTT+TGG | - | chr7_4:51618111-51618130 | Msa1161410:intron | 10.0% |
| !!! | AAAAAAATTAGTATGATTTT+GGG | - | chr7_4:51618112-51618131 | Msa1161410:intron | 10.0% |
| !!! | TATTTCAATTTTTAACTATT+GGG | - | chr7_4:51618304-51618323 | Msa1161410:CDS | 10.0% |
| !! | TATACTAAAAATGTTAAAAT+AGG | - | chr7_4:51619121-51619140 | Msa1161410:intron | 10.0% |
| !! | ATACTAAAAATGTTAAAATA+GGG | - | chr7_4:51619122-51619141 | Msa1161410:intron | 10.0% |
| !!! | TCCTTTTTTTTATTTTATAA+TGG | - | chr7_4:51619306-51619325 | Msa1161410:intron | 10.0% |
| !! | TCCATTATAAAATAAAAAAA+AGG | + | chr7_4:51619310-51619329 | None:intergenic | 10.0% |
| !!! | TTTTTTTTATTTTATAATGG+AGG | - | chr7_4:51619309-51619328 | Msa1161410:intron | 10.0% |
| !!! | TTTTTTATTATCTTTTGTAT+TGG | - | chr7_4:51619926-51619945 | Msa1161410:intron | 10.0% |
| !!! | TTTTTATTATCTTTTGTATT+GGG | - | chr7_4:51619927-51619946 | Msa1161410:intron | 10.0% |
| !! | ATATTAAAACTAAAGAATAA+TGG | + | chr7_4:51620228-51620247 | None:intergenic | 10.0% |
| !! | CAATAGTTAAAAATTGAAAT+AGG | + | chr7_4:51618305-51618324 | None:intergenic | 15.0% |
| !!! | CTATTTCAATTTTTAACTAT+TGG | - | chr7_4:51618303-51618322 | Msa1161410:CDS | 15.0% |
| !!! | AAAACAATTTTAAGAGATTA+AGG | + | chr7_4:51619374-51619393 | None:intergenic | 15.0% |
| !! | CAAATAATAATATCTATTCT+GGG | + | chr7_4:51619732-51619751 | None:intergenic | 15.0% |
| !! | ACAAATAATAATATCTATTC+TGG | + | chr7_4:51619733-51619752 | None:intergenic | 15.0% |
| !!! | CTTTAGTTTTAATATCATTT+TGG | - | chr7_4:51620233-51620252 | Msa1161410:intron | 15.0% |
| !! | AATATAAGTAGAAAAGAAAA+AGG | - | chr7_4:51620662-51620681 | Msa1161410:five_prime_UTR | 15.0% |
| !! | TTTATATAAACTAAAATCCA+AGG | + | chr7_4:51620707-51620726 | None:intergenic | 15.0% |
| !! | AGAAATAATAGATAGATAGA+TGG | + | chr7_4:51617597-51617616 | None:intergenic | 20.0% |
| !!! | TTTTTCTTCGTTTCTTAATT+GGG | - | chr7_4:51618052-51618071 | Msa1161410:intron | 20.0% |
| !! | TGGTTCAATTATATGAAATT+AGG | - | chr7_4:51618179-51618198 | Msa1161410:CDS | 20.0% |
| !! | GGTTCAATTATATGAAATTA+GGG | - | chr7_4:51618180-51618199 | Msa1161410:CDS | 20.0% |
| !! | AATTCAAGAAAGAATAATGT+TGG | - | chr7_4:51618395-51618414 | Msa1161410:CDS | 20.0% |
| !!! | TCCTCTTTAAGAAAATATAT+CGG | - | chr7_4:51618532-51618551 | Msa1161410:intron | 20.0% |
| !!! | TTGTTGATAGAATTCTATAT+TGG | - | chr7_4:51618737-51618756 | Msa1161410:intron | 20.0% |
| !!! | TATTTTTTCGTCATTTCTTT+GGG | - | chr7_4:51618958-51618977 | Msa1161410:intron | 20.0% |
| !!! | TTTTAGTATAATATACTCTC+TGG | + | chr7_4:51619111-51619130 | None:intergenic | 20.0% |
| !! | TTGATATGAAATCAAAACAA+TGG | + | chr7_4:51619167-51619186 | None:intergenic | 20.0% |
| !!! | TTGTTTTGATTTCATATCAA+AGG | - | chr7_4:51619167-51619186 | Msa1161410:intron | 20.0% |
| !! | GATAATAAAAAATACGTCAA+AGG | + | chr7_4:51619918-51619937 | None:intergenic | 20.0% |
| !!! | TTAATATCATTTTGGATGTA+TGG | - | chr7_4:51620241-51620260 | Msa1161410:intron | 20.0% |
| !!! | ATTCTAAAGTTAGTTTATGA+TGG | - | chr7_4:51620745-51620764 | Msa1161410:five_prime_UTR | 20.0% |
| !!! | TTCTAAAGTTAGTTTATGAT+GGG | - | chr7_4:51620746-51620765 | Msa1161410:five_prime_UTR | 20.0% |
| !! | TGCCTTATAATACAAATTAA+GGG | + | chr7_4:51620810-51620829 | None:intergenic | 20.0% |
| !! | TTGCCTTATAATACAAATTA+AGG | + | chr7_4:51620811-51620830 | None:intergenic | 20.0% |
| ! | AAAAAAAAAACATCACAGCA+TGG | - | chr7_4:51617675-51617694 | Msa1161410:three_prime_UTR | 25.0% |
| !! | CTTTTTCTTCGTTTCTTAAT+TGG | - | chr7_4:51618051-51618070 | Msa1161410:intron | 25.0% |
| !! | ACCGATATATTTTCTTAAAG+AGG | + | chr7_4:51618536-51618555 | None:intergenic | 25.0% |
| !! | GTTTTATGATTAGAGAAATG+TGG | - | chr7_4:51618590-51618609 | Msa1161410:intron | 25.0% |
| ! | AATTCTATCAACAAAAACCA+AGG | + | chr7_4:51618731-51618750 | None:intergenic | 25.0% |
| ! | TTGATAGAATTCTATATTGG+CGG | - | chr7_4:51618740-51618759 | Msa1161410:intron | 25.0% |
| ! | GTAAGATAAGAATCTTAGTT+TGG | - | chr7_4:51618926-51618945 | Msa1161410:intron | 25.0% |
| !!! | GTATTTTTTCGTCATTTCTT+TGG | - | chr7_4:51618957-51618976 | Msa1161410:intron | 25.0% |
| !!! | ATTTTTTCGTCATTTCTTTG+GGG | - | chr7_4:51618959-51618978 | Msa1161410:intron | 25.0% |
| ! | ACAATTTCTTGAAGAAAAAG+AGG | + | chr7_4:51619429-51619448 | None:intergenic | 25.0% |
| !! | TGTAATTATTTCTCACAAGA+TGG | - | chr7_4:51619446-51619465 | Msa1161410:CDS | 25.0% |
| !! | TATTATCTTTTGTATTGGGA+TGG | - | chr7_4:51619931-51619950 | Msa1161410:intron | 25.0% |
| !! | TCTAAAGTTAGTTTATGATG+GGG | - | chr7_4:51620747-51620766 | Msa1161410:five_prime_UTR | 25.0% |
| ! | CCTTATAATACAAATTAAGG+GGG | + | chr7_4:51620808-51620827 | None:intergenic | 25.0% |
| ! | GCCTTATAATACAAATTAAG+GGG | + | chr7_4:51620809-51620828 | None:intergenic | 25.0% |
| AGTAATATGAGTTAGTAGAG+TGG | + | chr7_4:51617537-51617556 | None:intergenic | 30.0% | |
| !! | TTTGGGTTATGTGATGTTTT+TGG | - | chr7_4:51618129-51618148 | Msa1161410:intron | 30.0% |
| ACATTTGATTGTTGAAGTGA+TGG | - | chr7_4:51618159-51618178 | Msa1161410:CDS | 30.0% | |
| ACTCATGAATTTCAACTAAC+AGG | - | chr7_4:51618474-51618493 | Msa1161410:intron | 30.0% | |
| ATTTGATGTAAGTGATTGAG+TGG | - | chr7_4:51618557-51618576 | Msa1161410:intron | 30.0% | |
| AAAGAACAAAAAAACAAGCG+TGG | + | chr7_4:51618631-51618650 | None:intergenic | 30.0% | |
| ! | TTTGTTCTTTTCATGTGTTG+AGG | - | chr7_4:51618641-51618660 | Msa1161410:intron | 30.0% |
| AAAAGACTATAGTGAAACCA+CGG | + | chr7_4:51618775-51618794 | None:intergenic | 30.0% | |
| ! | GGATTTTATTGGATTGTTGT+CGG | - | chr7_4:51618864-51618883 | Msa1161410:intron | 30.0% |
| GTCTTACATCAAAACAAAGA+AGG | + | chr7_4:51619066-51619085 | None:intergenic | 30.0% | |
| GATTTCATATCAAAGGAGAA+TGG | - | chr7_4:51619174-51619193 | Msa1161410:intron | 30.0% | |
| AAATACAATCACTTTCCAAC+TGG | + | chr7_4:51619527-51619546 | None:intergenic | 30.0% | |
| !!! | TCGAGTTGAATTTTTGAAGT+AGG | - | chr7_4:51619552-51619571 | Msa1161410:intron | 30.0% |
| TCAAGCGAATCTTAAGTATT+TGG | + | chr7_4:51619612-51619631 | None:intergenic | 30.0% | |
| ATAATATCTATTCTGGGTTG+AGG | + | chr7_4:51619726-51619745 | None:intergenic | 30.0% | |
| !!! | TAAGAGCATTTTATGCTAGA+GGG | + | chr7_4:51619790-51619809 | None:intergenic | 30.0% |
| !!! | ATAAGAGCATTTTATGCTAG+AGG | + | chr7_4:51619791-51619810 | None:intergenic | 30.0% |
| ATGCTATCTATAGCGTTTAT+TGG | - | chr7_4:51619830-51619849 | Msa1161410:intron | 30.0% | |
| !! | TGTTTTTATCACATTCTTGC+AGG | - | chr7_4:51619873-51619892 | Msa1161410:intron | 30.0% |
| CATAAGCTAACGCTATTATT+GGG | + | chr7_4:51619991-51620010 | None:intergenic | 30.0% | |
| !! | TATGCTTTAAGAATCAGAGA+AGG | - | chr7_4:51620007-51620026 | Msa1161410:intron | 30.0% |
| GTTTAGTCAGTCAAATGTAA+TGG | - | chr7_4:51620069-51620088 | Msa1161410:intron | 30.0% | |
| TCAGTCAAATGTAATGGTTA+TGG | - | chr7_4:51620075-51620094 | Msa1161410:intron | 30.0% | |
| TTTGTACTTACAGAATCATC+TGG | + | chr7_4:51620181-51620200 | None:intergenic | 30.0% | |
| ! | TTTCGTTGATAAAGACTAGA+TGG | - | chr7_4:51620559-51620578 | Msa1161410:CDS | 30.0% |
| GAATAGAGAACCAAAACATT+TGG | - | chr7_4:51620618-51620637 | Msa1161410:CDS | 30.0% | |
| ! | CAGCAAATTACCAAATGTTT+TGG | + | chr7_4:51620631-51620650 | None:intergenic | 30.0% |
| ACTAAAATCCAAGGATGAAA+GGG | + | chr7_4:51620698-51620717 | None:intergenic | 30.0% | |
| AACTAAAATCCAAGGATGAA+AGG | + | chr7_4:51620699-51620718 | None:intergenic | 30.0% | |
| GGGGTATATGTATATATTGT+AGG | - | chr7_4:51620766-51620785 | Msa1161410:five_prime_UTR | 30.0% | |
| TATAATACAAATTAAGGGGG+AGG | + | chr7_4:51620805-51620824 | None:intergenic | 30.0% | |
| !! | CCCCCTTAATTTGTATTATA+AGG | - | chr7_4:51620805-51620824 | Msa1161410:five_prime_UTR | 30.0% |
| AATATGAGTTAGTAGAGTGG+TGG | + | chr7_4:51617534-51617553 | None:intergenic | 35.0% | |
| !!! | AGAAACGAGGTTTTGGTTTT+TGG | + | chr7_4:51617626-51617645 | None:intergenic | 35.0% |
| ! | TTAAGACAGAAACGAGGTTT+TGG | + | chr7_4:51617633-51617652 | None:intergenic | 35.0% |
| AGAGAATTAAGACAGAAACG+AGG | + | chr7_4:51617639-51617658 | None:intergenic | 35.0% | |
| AGAAGAGAGATAAACCTGTA+AGG | + | chr7_4:51618027-51618046 | None:intergenic | 35.0% | |
| ! | GGGCACAATTATTTGTTAGA+AGG | - | chr7_4:51618324-51618343 | Msa1161410:CDS | 35.0% |
| GGTTTGAGTGATTTATGTTC+CGG | - | chr7_4:51618662-51618681 | Msa1161410:intron | 35.0% | |
| GTTTGAGTGATTTATGTTCC+GGG | - | chr7_4:51618663-51618682 | Msa1161410:intron | 35.0% | |
| GTCGTACTTTATGAGATGAA+TGG | - | chr7_4:51618687-51618706 | Msa1161410:intron | 35.0% | |
| GTACTTTATGAGATGAATGG+TGG | - | chr7_4:51618690-51618709 | Msa1161410:intron | 35.0% | |
| !! | AATGGTGGTTTTCTAGTGTA+TGG | - | chr7_4:51618705-51618724 | Msa1161410:intron | 35.0% |
| !! | GGTGGGTTTTTGGATTTTAT+TGG | - | chr7_4:51618853-51618872 | Msa1161410:intron | 35.0% |
| ! | TTTTATTGGATTGTTGTCGG+TGG | - | chr7_4:51618867-51618886 | Msa1161410:intron | 35.0% |
| ! | TCATTTCTTTGGGGAATAGT+TGG | - | chr7_4:51618968-51618987 | Msa1161410:intron | 35.0% |
| ! | CATTTCTTTGGGGAATAGTT+GGG | - | chr7_4:51618969-51618988 | Msa1161410:intron | 35.0% |
| CTGCTTTGACTACTCTTTAT+TGG | + | chr7_4:51619020-51619039 | None:intergenic | 35.0% | |
| !! | TTGTTTTGCCAGAATTGAGA+TGG | - | chr7_4:51619387-51619406 | Msa1161410:intron | 35.0% |
| ! | TGTTTTGCCAGAATTGAGAT+GGG | - | chr7_4:51619388-51619407 | Msa1161410:intron | 35.0% |
| CTGTTAAATAGTTTGACCCT+TGG | - | chr7_4:51619492-51619511 | Msa1161410:CDS | 35.0% | |
| TAAATAGTTTGACCCTTGGT+AGG | - | chr7_4:51619496-51619515 | Msa1161410:CDS | 35.0% | |
| !!! | TGAATTTTTGAAGTAGGCTC+TGG | - | chr7_4:51619558-51619577 | Msa1161410:intron | 35.0% |
| ! | AGTATTTGGACAGGTCTTAT+TGG | + | chr7_4:51619598-51619617 | None:intergenic | 35.0% |
| CGAATCTTAAGTATTTGGAC+AGG | + | chr7_4:51619607-51619626 | None:intergenic | 35.0% | |
| AATTCAGACTCTGAATAACC+AGG | + | chr7_4:51619670-51619689 | None:intergenic | 35.0% | |
| AGAGTCTGAATTTCAGACTA+AGG | - | chr7_4:51619678-51619697 | Msa1161410:intron | 35.0% | |
| GCATAAGCTAACGCTATTAT+TGG | + | chr7_4:51619992-51620011 | None:intergenic | 35.0% | |
| GACTGACTAAACCTATACAT+AGG | + | chr7_4:51620061-51620080 | None:intergenic | 35.0% | |
| !! | CAACTTGCTAAAGCAAGAAT+CGG | - | chr7_4:51620115-51620134 | Msa1161410:intron | 35.0% |
| GAAGAGATAGTTCACTGATA+TGG | + | chr7_4:51620156-51620175 | None:intergenic | 35.0% | |
| ! | TCATTTTGGATGTATGGAAG+AGG | - | chr7_4:51620247-51620266 | Msa1161410:intron | 35.0% |
| ! | CATTTTGGATGTATGGAAGA+GGG | - | chr7_4:51620248-51620267 | Msa1161410:intron | 35.0% |
| TGACAAGCATCAAAGAATCA+CGG | + | chr7_4:51620312-51620331 | None:intergenic | 35.0% | |
| ! | GAAGTAGTTAGTCTCTCTTT+CGG | + | chr7_4:51620361-51620380 | None:intergenic | 35.0% |
| ACTACTTCTGATTATGCTGT+AGG | - | chr7_4:51620373-51620392 | Msa1161410:CDS | 35.0% | |
| TTCCATCAACATATGGACAT+AGG | + | chr7_4:51620412-51620431 | None:intergenic | 35.0% | |
| TGATGCATGCACAATGAAAA+TGG | + | chr7_4:51620463-51620482 | None:intergenic | 35.0% | |
| CGGATATTATATTTGCAGAG+CGG | + | chr7_4:51620515-51620534 | None:intergenic | 35.0% | |
| AACGAAGTGTATCACTTGAA+AGG | - | chr7_4:51620588-51620607 | Msa1161410:CDS | 35.0% | |
| ACGAAGTGTATCACTTGAAA+GGG | - | chr7_4:51620589-51620608 | Msa1161410:CDS | 35.0% | |
| CCACATGAATTTCAACCGAT+AGG | + | chr7_4:51618434-51618453 | None:intergenic | 40.0% | |
| ! | CCTATCGGTTGAAATTCATG+TGG | - | chr7_4:51618431-51618450 | Msa1161410:CDS | 40.0% |
| CATGTGGTCCCATGTAAATT+TGG | - | chr7_4:51618447-51618466 | Msa1161410:intron | 40.0% | |
| TGGTCCCATGTAAATTTGGT+GGG | - | chr7_4:51618451-51618470 | Msa1161410:intron | 40.0% | |
| GAGTCCCACCAAATTTACAT+GGG | + | chr7_4:51618458-51618477 | None:intergenic | 40.0% | |
| TGAGTCCCACCAAATTTACA+TGG | + | chr7_4:51618459-51618478 | None:intergenic | 40.0% | |
| ! | CAACTAACAGGAGAGTGTAT+TGG | - | chr7_4:51618486-51618505 | Msa1161410:intron | 40.0% |
| GAACAAAAAAACAAGCGTGG+AGG | + | chr7_4:51618628-51618647 | None:intergenic | 40.0% | |
| ATCTCATAAAGTACGACACC+CGG | + | chr7_4:51618684-51618703 | None:intergenic | 40.0% | |
| GTTAGAGCCTATGAACACAT+TGG | - | chr7_4:51618818-51618837 | Msa1161410:intron | 40.0% | |
| GATGATGCCAATGTGTTCAT+AGG | + | chr7_4:51618828-51618847 | None:intergenic | 40.0% | |
| ACACATTGGCATCATCTGTT+TGG | - | chr7_4:51618832-51618851 | Msa1161410:intron | 40.0% | |
| ATTGGCATCATCTGTTTGGT+GGG | - | chr7_4:51618836-51618855 | Msa1161410:intron | 40.0% | |
| !!! | TCATCTGTTTGGTGGGTTTT+TGG | - | chr7_4:51618843-51618862 | Msa1161410:intron | 40.0% |
| TTATCTTACCAGTAGAGACG+AGG | + | chr7_4:51618915-51618934 | None:intergenic | 40.0% | |
| ! | ACTTTGACAAGCTCTGATTC+AGG | - | chr7_4:51619231-51619250 | Msa1161410:intron | 40.0% |
| TCAAGGCAATGTTTGGGAAA+GGG | + | chr7_4:51619262-51619281 | None:intergenic | 40.0% | |
| ATCAAGGCAATGTTTGGGAA+AGG | + | chr7_4:51619263-51619282 | None:intergenic | 40.0% | |
| TTTCCCAAACATTGCCTTGA+TGG | - | chr7_4:51619262-51619281 | Msa1161410:intron | 40.0% | |
| CTTCCATCAAGGCAATGTTT+GGG | + | chr7_4:51619268-51619287 | None:intergenic | 40.0% | |
| ! | GTTTTGCCAGAATTGAGATG+GGG | - | chr7_4:51619389-51619408 | Msa1161410:intron | 40.0% |
| CAGGCTCAAAATTCAACAAG+TGG | + | chr7_4:51619651-51619670 | None:intergenic | 40.0% | |
| !! | CACTTGTTGAATTTTGAGCC+TGG | - | chr7_4:51619649-51619668 | Msa1161410:intron | 40.0% |
| !! | AAGAATCAGAGAAGGTGCTT+CGG | - | chr7_4:51620015-51620034 | Msa1161410:intron | 40.0% |
| TCAGCTCACTTCCTATGTAT+AGG | - | chr7_4:51620047-51620066 | Msa1161410:intron | 40.0% | |
| GACAAGCATCAAAGAATCAC+GGG | + | chr7_4:51620311-51620330 | None:intergenic | 40.0% | |
| TGCCTATGTCCATATGTTGA+TGG | - | chr7_4:51620407-51620426 | Msa1161410:CDS | 40.0% | |
| AGTTCGGTTCCATCAACATA+TGG | + | chr7_4:51620419-51620438 | None:intergenic | 40.0% | |
| !! | CAATGAAAATGGTGGGTACA+TGG | + | chr7_4:51620452-51620471 | None:intergenic | 40.0% |
| GCATGCACAATGAAAATGGT+GGG | + | chr7_4:51620459-51620478 | None:intergenic | 40.0% | |
| TGCATGCACAATGAAAATGG+TGG | + | chr7_4:51620460-51620479 | None:intergenic | 40.0% | |
| TATCCGAAGAGCTGATACAT+TGG | - | chr7_4:51620529-51620548 | Msa1161410:CDS | 40.0% | |
| AGACCAATGTATCAGCTCTT+CGG | + | chr7_4:51620535-51620554 | None:intergenic | 40.0% | |
| AAATCCAAGGATGAAAGGGT+GGG | + | chr7_4:51620694-51620713 | None:intergenic | 40.0% | |
| AAAATCCAAGGATGAAAGGG+TGG | + | chr7_4:51620695-51620714 | None:intergenic | 40.0% | |
| ! | CGTTGTTGCTGTTCTTGTTC+AGG | + | chr7_4:51617715-51617734 | None:intergenic | 45.0% |
| GACATGAAGAAGACACTCGA+AGG | + | chr7_4:51617950-51617969 | None:intergenic | 45.0% | |
| ! | CCTGTAAGGAGTATGAGAGA+AGG | + | chr7_4:51618013-51618032 | None:intergenic | 45.0% |
| CCTTCTCTCATACTCCTTAC+AGG | - | chr7_4:51618010-51618029 | Msa1161410:intron | 45.0% | |
| GGCAACACACTTTCTCCTAT+CGG | - | chr7_4:51618416-51618435 | Msa1161410:CDS | 45.0% | |
| GTGGTCCCATGTAAATTTGG+TGG | - | chr7_4:51618450-51618469 | Msa1161410:intron | 45.0% | |
| !! | GGTTTTCTAGTGTATGGCCT+TGG | - | chr7_4:51618711-51618730 | Msa1161410:intron | 45.0% |
| CATTGGCATCATCTGTTTGG+TGG | - | chr7_4:51618835-51618854 | Msa1161410:intron | 45.0% | |
| GAGAATCTTCGAGAAGTGGT+TGG | + | chr7_4:51618893-51618912 | None:intergenic | 45.0% | |
| AAGATTCTCCTCGTCTCTAC+TGG | - | chr7_4:51618904-51618923 | Msa1161410:intron | 45.0% | |
| ! | TTCTTTGGGGAATAGTTGGG+TGG | - | chr7_4:51618972-51618991 | Msa1161410:intron | 45.0% |
| GCTTCCATCAAGGCAATGTT+TGG | + | chr7_4:51619269-51619288 | None:intergenic | 45.0% | |
| GTGCTCTTAAGCTTCCATCA+AGG | + | chr7_4:51619279-51619298 | None:intergenic | 45.0% | |
| CAACTTCCCCATCTCAATTC+TGG | + | chr7_4:51619398-51619417 | None:intergenic | 45.0% | |
| CAACTGGACTTTCCTACCAA+GGG | + | chr7_4:51619511-51619530 | None:intergenic | 45.0% | |
| ACATTCTTGCAGGTTAACCG+TGG | - | chr7_4:51619883-51619902 | Msa1161410:intron | 45.0% | |
| GTCAAAGGCTAGAAAGACCA+CGG | + | chr7_4:51619903-51619922 | None:intergenic | 45.0% | |
| ACATGGAAGGCGGTAAAGTT+CGG | + | chr7_4:51620435-51620454 | None:intergenic | 45.0% | |
| !! | GAAAATGGTGGGTACATGGA+AGG | + | chr7_4:51620448-51620467 | None:intergenic | 45.0% |
| !! | TTGCTTTTGTCCGAAGCCAA+CGG | + | chr7_4:51620487-51620506 | None:intergenic | 45.0% |
| TATATTGTAGGCCAGTCGTG+AGG | - | chr7_4:51620778-51620797 | Msa1161410:five_prime_UTR | 45.0% | |
| ATATTGTAGGCCAGTCGTGA+GGG | - | chr7_4:51620779-51620798 | Msa1161410:five_prime_UTR | 45.0% | |
| ! | TAGAGTGGTGGCGATGAAAG+GGG | + | chr7_4:51617522-51617541 | None:intergenic | 50.0% |
| ! | GTAGAGTGGTGGCGATGAAA+GGG | + | chr7_4:51617523-51617542 | None:intergenic | 50.0% |
| ! | AGTAGAGTGGTGGCGATGAA+AGG | + | chr7_4:51617524-51617543 | None:intergenic | 50.0% |
| ACAAGAACAGCAACAACGCC+AGG | - | chr7_4:51617717-51617736 | Msa1161410:three_prime_UTR | 50.0% | |
| GAGTTCCAACAGTGATGACC+TGG | + | chr7_4:51617738-51617757 | None:intergenic | 50.0% | |
| TCGGAGAACGATGAAGACGA+CGG | - | chr7_4:51617784-51617803 | Msa1161410:exon | 50.0% | |
| ACGGAGCATGCGTCTATTCA+AGG | - | chr7_4:51617803-51617822 | Msa1161410:CDS | 50.0% | |
| CGGAGCATGCGTCTATTCAA+GGG | - | chr7_4:51617804-51617823 | Msa1161410:CDS | 50.0% | |
| AGCATGCGTCTATTCAAGGG+CGG | - | chr7_4:51617807-51617826 | Msa1161410:CDS | 50.0% | |
| GGAGAAAGTGGAGAGGATGA+CGG | + | chr7_4:51617884-51617903 | None:intergenic | 50.0% | |
| CATAACCTGAGAGGAGTGGA+AGG | + | chr7_4:51617913-51617932 | None:intergenic | 50.0% | |
| CTTCCACTCCTCTCAGGTTA+TGG | - | chr7_4:51617911-51617930 | Msa1161410:CDS | 50.0% | |
| !! | ATTGGCGGATTATTGAGCCG+TGG | - | chr7_4:51618755-51618774 | Msa1161410:intron | 50.0% |
| CGAGGAGAATCTTCGAGAAG+TGG | + | chr7_4:51618897-51618916 | None:intergenic | 50.0% | |
| CCAACTGGACTTTCCTACCA+AGG | + | chr7_4:51619512-51619531 | None:intergenic | 50.0% | |
| CCTTGGTAGGAAAGTCCAGT+TGG | - | chr7_4:51619509-51619528 | Msa1161410:CDS | 50.0% | |
| !! | AATGGTGGGTACATGGAAGG+CGG | + | chr7_4:51620445-51620464 | None:intergenic | 50.0% |
| ATTGTGCATGCATCAGCCGT+TGG | - | chr7_4:51620468-51620487 | Msa1161410:CDS | 50.0% | |
| ATGTCCCACCCTTTCATCCT+TGG | - | chr7_4:51620687-51620706 | Msa1161410:five_prime_UTR | 50.0% | |
| GATGAAAGGGGAGGGTGGTA+GGG | + | chr7_4:51617510-51617529 | None:intergenic | 55.0% | |
| CAACGCCAGGTCATCACTGT+TGG | - | chr7_4:51617730-51617749 | Msa1161410:three_prime_UTR | 55.0% | |
| ATCGAGACATGCGGAGGAGA+GGG | + | chr7_4:51617765-51617784 | None:intergenic | 55.0% | |
| TCTCCTCCGCATGTCTCGAT+CGG | - | chr7_4:51617765-51617784 | Msa1161410:three_prime_UTR | 55.0% | |
| CGTTCTCCGATCGAGACATG+CGG | + | chr7_4:51617774-51617793 | None:intergenic | 55.0% | |
| CGTCTATTCAAGGGCGGTGT+TGG | - | chr7_4:51617813-51617832 | Msa1161410:CDS | 55.0% | |
| ! | CTATTCAAGGGCGGTGTTGG+TGG | - | chr7_4:51617816-51617835 | Msa1161410:CDS | 55.0% |
| !! | TGTTGGTGGTCGACATGGTC+TGG | - | chr7_4:51617830-51617849 | Msa1161410:CDS | 55.0% |
| !! | GGTCTGGAACCTCGCTTTTG+TGG | - | chr7_4:51617846-51617865 | Msa1161410:CDS | 55.0% |
| !! | CTGGAACCTCGCTTTTGTGG+TGG | - | chr7_4:51617849-51617868 | Msa1161410:CDS | 55.0% |
| ! | GAAAGTGGAGAGGATGACGG+CGG | + | chr7_4:51617881-51617900 | None:intergenic | 55.0% |
| GAGCCATAACCTGAGAGGAG+TGG | + | chr7_4:51617917-51617936 | None:intergenic | 55.0% | |
| CCACAGAGCCATAACCTGAG+AGG | + | chr7_4:51617922-51617941 | None:intergenic | 55.0% | |
| ! | CCTCTCAGGTTATGGCTCTG+TGG | - | chr7_4:51617919-51617938 | Msa1161410:CDS | 55.0% |
| !! | CATGCATCAGCCGTTGGCTT+CGG | - | chr7_4:51620474-51620493 | Msa1161410:CDS | 55.0% |
| CGATGAAAGGGGAGGGTGGT+AGG | + | chr7_4:51617511-51617530 | None:intergenic | 60.0% | |
| ! | GTGGTGGCGATGAAAGGGGA+GGG | + | chr7_4:51617518-51617537 | None:intergenic | 60.0% |
| ! | AGTGGTGGCGATGAAAGGGG+AGG | + | chr7_4:51617519-51617538 | None:intergenic | 60.0% |
| GATCGAGACATGCGGAGGAG+AGG | + | chr7_4:51617766-51617785 | None:intergenic | 60.0% | |
| TCTCCGATCGAGACATGCGG+AGG | + | chr7_4:51617771-51617790 | None:intergenic | 60.0% | |
| CGGCAACCACCACAAAAGCG+AGG | + | chr7_4:51617858-51617877 | None:intergenic | 60.0% | |
| GACGCTCGGAGAAAGTGGAG+AGG | + | chr7_4:51617891-51617910 | None:intergenic | 60.0% | |
| GGAAGGACGCTCGGAGAAAG+TGG | + | chr7_4:51617896-51617915 | None:intergenic | 60.0% | |
| GAGAGGAGTGGAAGGACGCT+CGG | + | chr7_4:51617905-51617924 | None:intergenic | 60.0% | |
| AGCGTCCTTCCACTCCTCTC+AGG | - | chr7_4:51617905-51617924 | Msa1161410:CDS | 60.0% | |
| GTGGCGATGAAAGGGGAGGG+TGG | + | chr7_4:51617515-51617534 | None:intergenic | 65.0% | |
| !! | GGCGGTGTTGGTGGTCGACA+TGG | - | chr7_4:51617825-51617844 | Msa1161410:CDS | 65.0% |
| ! | AGTGGAGAGGATGACGGCGG+CGG | + | chr7_4:51617878-51617897 | None:intergenic | 65.0% |
| AAGGGGGAGGCCCTCACGAC+TGG | + | chr7_4:51620792-51620811 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 51617503 | 51620845 | 51617503 | ID=Msa1161410;Name=Msa1161410 |
| chr7_4 | mRNA | 51617503 | 51620845 | 51617503 | ID=Msa1161410-mRNA-1;Parent=Msa1161410;Name=Msa1161410-mRNA-1;_AED=0.33;_eAED=0.33;_QI=191|1|1|1|0.66|0.75|4|289|304 |
| chr7_4 | exon | 51617503 | 51617953 | 51617503 | ID=Msa1161410-mRNA-1:exon:14691;Parent=Msa1161410-mRNA-1 |
| chr7_4 | exon | 51618159 | 51618453 | 51618159 | ID=Msa1161410-mRNA-1:exon:14690;Parent=Msa1161410-mRNA-1 |
| chr7_4 | exon | 51619423 | 51619542 | 51619423 | ID=Msa1161410-mRNA-1:exon:14689;Parent=Msa1161410-mRNA-1 |
| chr7_4 | exon | 51620317 | 51620845 | 51620317 | ID=Msa1161410-mRNA-1:exon:14688;Parent=Msa1161410-mRNA-1 |
| chr7_4 | five_prime_UTR | 51620655 | 51620845 | 51620655 | ID=Msa1161410-mRNA-1:five_prime_utr;Parent=Msa1161410-mRNA-1 |
| chr7_4 | CDS | 51620317 | 51620654 | 51620317 | ID=Msa1161410-mRNA-1:cds;Parent=Msa1161410-mRNA-1 |
| chr7_4 | CDS | 51619423 | 51619542 | 51619423 | ID=Msa1161410-mRNA-1:cds;Parent=Msa1161410-mRNA-1 |
| chr7_4 | CDS | 51618159 | 51618453 | 51618159 | ID=Msa1161410-mRNA-1:cds;Parent=Msa1161410-mRNA-1 |
| chr7_4 | CDS | 51617792 | 51617953 | 51617792 | ID=Msa1161410-mRNA-1:cds;Parent=Msa1161410-mRNA-1 |
| chr7_4 | three_prime_UTR | 51617503 | 51617791 | 51617503 | ID=Msa1161410-mRNA-1:three_prime_utr;Parent=Msa1161410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
