Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163110 | XP_013449738.1 | 96.579 | 380 | 13 | 0 | 1 | 380 | 1 | 380 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163110 | sp|Q93ZQ3|PLP9_ARATH | 67.617 | 386 | 108 | 6 | 1 | 377 | 3 | 380 | 0.0 | 532 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163110 | A0A072U326 | 96.579 | 380 | 13 | 0 | 1 | 380 | 1 | 380 | 0.0 | 759 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1076010 | Msa1163110 | 0.978501 | 5.881783e-146 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163110 | MtrunA17_Chr7g0259871 | 96.579 | 380 | 13 | 0 | 1 | 380 | 1 | 380 | 0.0 | 759 |
| Msa1163110 | MtrunA17_Chr1g0185551 | 72.267 | 375 | 96 | 4 | 1 | 373 | 1 | 369 | 0.0 | 540 |
| Msa1163110 | MtrunA17_Chr1g0199801 | 39.535 | 387 | 192 | 8 | 29 | 379 | 74 | 454 | 1.61e-86 | 270 |
| Msa1163110 | MtrunA17_Chr2g0292051 | 39.386 | 391 | 188 | 12 | 1 | 360 | 24 | 396 | 1.62e-72 | 233 |
| Msa1163110 | MtrunA17_Chr1g0153781 | 27.692 | 260 | 157 | 7 | 32 | 270 | 23 | 272 | 2.90e-27 | 111 |
| Msa1163110 | MtrunA17_Chr3g0133681 | 26.006 | 323 | 204 | 10 | 52 | 346 | 42 | 357 | 3.94e-26 | 108 |
| Msa1163110 | MtrunA17_Chr8g0335611 | 27.988 | 343 | 211 | 10 | 28 | 347 | 30 | 359 | 3.98e-26 | 108 |
| Msa1163110 | MtrunA17_Chr8g0335621 | 29.960 | 247 | 153 | 6 | 28 | 263 | 61 | 298 | 7.61e-26 | 108 |
| Msa1163110 | MtrunA17_Chr8g0335581 | 25.816 | 337 | 215 | 10 | 32 | 346 | 23 | 346 | 1.41e-24 | 103 |
| Msa1163110 | MtrunA17_Chr5g0402441 | 25.723 | 346 | 215 | 12 | 32 | 346 | 18 | 352 | 1.83e-24 | 103 |
| Msa1163110 | MtrunA17_Chr3g0133691 | 26.133 | 375 | 223 | 13 | 32 | 359 | 22 | 389 | 6.77e-24 | 102 |
| Msa1163110 | MtrunA17_Chr5g0402451 | 23.782 | 349 | 221 | 11 | 32 | 346 | 12 | 349 | 7.51e-23 | 99.0 |
| Msa1163110 | MtrunA17_Chr8g0335591 | 29.218 | 243 | 151 | 7 | 32 | 263 | 34 | 266 | 4.40e-22 | 97.1 |
| Msa1163110 | MtrunA17_Chr8g0335631 | 28.807 | 243 | 153 | 7 | 32 | 263 | 34 | 267 | 1.32e-18 | 87.0 |
| Msa1163110 | MtrunA17_Chr8g0335651 | 28.319 | 226 | 123 | 9 | 54 | 264 | 53 | 254 | 1.49e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163110 | AT3G63200.1 | 67.617 | 386 | 108 | 6 | 1 | 377 | 3 | 380 | 0.0 | 532 |
| Msa1163110 | AT2G39220.1 | 39.200 | 375 | 200 | 5 | 29 | 379 | 107 | 477 | 2.02e-85 | 268 |
| Msa1163110 | AT3G54950.1 | 38.557 | 402 | 199 | 9 | 1 | 360 | 54 | 449 | 5.70e-80 | 254 |
| Msa1163110 | AT4G29800.1 | 40.274 | 365 | 181 | 8 | 32 | 360 | 123 | 486 | 3.31e-77 | 248 |
| Msa1163110 | AT4G29800.2 | 39.617 | 366 | 183 | 8 | 32 | 360 | 123 | 487 | 2.14e-75 | 243 |
| Msa1163110 | AT4G37060.1 | 29.655 | 290 | 174 | 11 | 24 | 294 | 15 | 293 | 3.10e-34 | 131 |
| Msa1163110 | AT4G37070.3 | 30.502 | 259 | 151 | 9 | 24 | 264 | 15 | 262 | 3.71e-30 | 119 |
| Msa1163110 | AT4G37070.1 | 30.502 | 259 | 151 | 9 | 24 | 264 | 15 | 262 | 3.71e-30 | 119 |
| Msa1163110 | AT4G37060.2 | 26.875 | 320 | 175 | 11 | 24 | 294 | 15 | 324 | 4.91e-30 | 120 |
| Msa1163110 | AT4G37070.2 | 30.502 | 259 | 151 | 9 | 24 | 264 | 15 | 262 | 6.04e-30 | 119 |
| Msa1163110 | AT5G43590.1 | 28.490 | 351 | 208 | 9 | 32 | 352 | 16 | 353 | 4.11e-29 | 117 |
| Msa1163110 | AT5G43590.2 | 28.490 | 351 | 208 | 9 | 32 | 352 | 83 | 420 | 9.36e-29 | 117 |
| Msa1163110 | AT4G37070.4 | 28.958 | 259 | 144 | 9 | 24 | 264 | 15 | 251 | 4.22e-26 | 108 |
| Msa1163110 | AT4G37050.1 | 25.959 | 339 | 198 | 11 | 49 | 346 | 54 | 380 | 2.85e-25 | 106 |
| Msa1163110 | AT2G26560.1 | 26.331 | 338 | 201 | 12 | 32 | 333 | 21 | 346 | 6.31e-22 | 97.1 |
Find 88 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATCCTCAAGGTGGATTA+AGG | 0.333108 | 7_4:+54179056 | None:intergenic |
| CAAGTTTCAACTTCGAGCTT+TGG | 0.337029 | 7_4:-54178645 | Msa1163110:CDS |
| TTCCGTCGACGGAAGCGAAC+TGG | 0.350891 | 7_4:+54178575 | None:intergenic |
| AATGCTGAGAATGCGAGTTT+TGG | 0.361301 | 7_4:+54179116 | None:intergenic |
| TGTTGGGAAATGCTTTCAAT+TGG | 0.372905 | 7_4:-54178312 | Msa1163110:CDS |
| TTTGTGCAGGCATTTGGTTT+GGG | 0.380361 | 7_4:-54177983 | Msa1163110:intron |
| GGCATTTGGTTTGGGAGAAA+AGG | 0.387921 | 7_4:-54177975 | Msa1163110:CDS |
| TACTGACTATGCGAGGATTC+AGG | 0.388689 | 7_4:-54178284 | Msa1163110:intron |
| GTTTGGGAGAAAAGGGAAGT+TGG | 0.393884 | 7_4:-54177967 | Msa1163110:CDS |
| CAAAGCTCGAAGTTGAAACT+TGG | 0.395282 | 7_4:+54178646 | None:intergenic |
| GTGCAACGTCTTGTTGCTAC+TGG | 0.398631 | 7_4:-54177845 | Msa1163110:CDS |
| CTCAGCCGTGGACGGTGGTT+TGG | 0.427429 | 7_4:-54178542 | Msa1163110:CDS |
| GATTTGAGCGTGAGCATCAT+TGG | 0.431201 | 7_4:+54179020 | None:intergenic |
| TTTGGGAGAAAAGGGAAGTT+GGG | 0.449030 | 7_4:-54177966 | Msa1163110:CDS |
| AAAGGGAAGTTGGGAAGAAA+CGG | 0.458731 | 7_4:-54177957 | Msa1163110:CDS |
| ATCACCACTGATGATGGATT+TGG | 0.463331 | 7_4:-54178940 | Msa1163110:CDS |
| CGCTGGTGCTCCGTTTCCGA+TGG | 0.464766 | 7_4:+54178423 | None:intergenic |
| TGCGTAACAGCCGCTGCTGC+CGG | 0.469498 | 7_4:+54178508 | None:intergenic |
| CTGTTAATTTCATTGCTGAC+AGG | 0.470929 | 7_4:-54178891 | Msa1163110:CDS |
| GGGAAAATCGTTGACATTGA+AGG | 0.471091 | 7_4:-54178755 | Msa1163110:CDS |
| TACTCTTCGTTGAGAATCTC+CGG | 0.471120 | 7_4:+54178821 | None:intergenic |
| TTCCAGTTCGCTTCCGTCGA+CGG | 0.477570 | 7_4:-54178577 | Msa1163110:CDS |
| AGAAACCGTTGATCAGATGT+TGG | 0.478228 | 7_4:-54178329 | Msa1163110:CDS |
| GTATTGGAGTCGTTACCGTT+TGG | 0.480768 | 7_4:-54177917 | Msa1163110:CDS |
| CGTTACCGTTTGGTGGGAAA+CGG | 0.481378 | 7_4:-54177907 | Msa1163110:CDS |
| GAAACCGTTGATCAGATGTT+GGG | 0.486925 | 7_4:-54178328 | Msa1163110:CDS |
| GCATTTGGTTTGGGAGAAAA+GGG | 0.487381 | 7_4:-54177974 | Msa1163110:CDS |
| AAGCTCCATTAGTGATAAAA+CGG | 0.488922 | 7_4:+54179212 | None:intergenic |
| TTGGAGTCGTTACCGTTTGG+TGG | 0.498381 | 7_4:-54177914 | Msa1163110:CDS |
| GGTGTTGAATGAGAGAGTAT+TGG | 0.507963 | 7_4:-54177933 | Msa1163110:CDS |
| ATCATCACCGGCACTGGCAT+TGG | 0.509709 | 7_4:-54178982 | Msa1163110:CDS |
| ACTCGCATTCTCAGCATTGA+CGG | 0.513676 | 7_4:-54179111 | Msa1163110:CDS |
| TTCGACATCATCACCGGCAC+TGG | 0.517422 | 7_4:-54178988 | Msa1163110:CDS |
| GCAATGATCACCACTGATGA+TGG | 0.521349 | 7_4:-54178946 | Msa1163110:CDS |
| GGCTTAATCTTGCATGGACT+AGG | 0.524173 | 7_4:+54177806 | None:intergenic |
| TGGAGTCGTTACCGTTTGGT+GGG | 0.535065 | 7_4:-54177913 | Msa1163110:CDS |
| AGCCGTTAGTCTCGTGCTAA+CGG | 0.538205 | 7_4:-54177787 | None:intergenic |
| GGAACCACCACCATTGTCTC+CGG | 0.538403 | 7_4:-54179084 | Msa1163110:CDS |
| GATGAACAATCCGGCAGCAG+CGG | 0.556633 | 7_4:-54178518 | Msa1163110:CDS |
| AGCGCCGGAGACAATGGTGG+TGG | 0.557801 | 7_4:+54179080 | None:intergenic |
| TATTGCACCAATGCCAGTGC+CGG | 0.559189 | 7_4:+54178975 | None:intergenic |
| TAAGGCAGCGCCGGAGACAA+TGG | 0.560744 | 7_4:+54179074 | None:intergenic |
| ACCTCATGCTCAGCCGTGGA+CGG | 0.565912 | 7_4:-54178550 | Msa1163110:CDS |
| TGGAACGGCTTGAAGAGACT+TGG | 0.566533 | 7_4:+54178595 | None:intergenic |
| TCACGACGCATTCTGTTCGC+TGG | 0.568343 | 7_4:+54178406 | None:intergenic |
| AGTAACCGTTTCCCACCAAA+CGG | 0.569382 | 7_4:+54177902 | None:intergenic |
| GATTACTTCGACATCATCAC+CGG | 0.572264 | 7_4:-54178994 | Msa1163110:CDS |
| CATCACCAAACCACCGTCCA+CGG | 0.573512 | 7_4:+54178537 | None:intergenic |
| ATTCTCAGCATTGACGGCGG+AGG | 0.573961 | 7_4:-54179105 | Msa1163110:CDS |
| ACCGTCCACGGCTGAGCATG+AGG | 0.574040 | 7_4:+54178549 | None:intergenic |
| TCGTGAATGTTCAACGTCGA+CGG | 0.577186 | 7_4:-54178380 | Msa1163110:CDS |
| TGGTTTGGTGATGAACAATC+CGG | 0.580116 | 7_4:-54178527 | Msa1163110:CDS |
| ACTAACGGCTTAATCTTGCA+TGG | 0.594493 | 7_4:+54177800 | None:intergenic |
| ATTTCCCAACATCTGATCAA+CGG | 0.595899 | 7_4:+54178324 | None:intergenic |
| GAATCCTCGCATAGTCAGTA+CGG | 0.600379 | 7_4:+54178287 | None:intergenic |
| TGATGCTCACGCTCAAATCA+CGG | 0.606039 | 7_4:-54179016 | Msa1163110:CDS |
| TGAATGTTCAACGTCGACGG+TGG | 0.606449 | 7_4:-54178377 | Msa1163110:CDS |
| TCCTCAACACTATTCACCGA+CGG | 0.607031 | 7_4:+54178460 | None:intergenic |
| TCGACGGAAGCGAACTGGAA+CGG | 0.607610 | 7_4:+54178580 | None:intergenic |
| CCTCAACACTATTCACCGAC+GGG | 0.608226 | 7_4:+54178461 | None:intergenic |
| AAGGTGGATTAAGGCAGCGC+CGG | 0.609842 | 7_4:+54179065 | None:intergenic |
| CGCTGCCTTAATCCACCTTG+AGG | 0.612199 | 7_4:-54179061 | Msa1163110:CDS |
| ACTTGGCGACTCCGACGCAT+CGG | 0.614092 | 7_4:+54178663 | None:intergenic |
| TTTCAAGGAAAAGAAAGCGA+GGG | 0.614411 | 7_4:-54178775 | Msa1163110:CDS |
| TCGTTGAGAATCTCCGGCGC+CGG | 0.615276 | 7_4:+54178827 | None:intergenic |
| GCATCTCTAGCAGTATAGAG+AGG | 0.616286 | 7_4:+54178913 | None:intergenic |
| GAGCATCATTGGTTTGTAAG+CGG | 0.617134 | 7_4:+54179031 | None:intergenic |
| GAATAGTGTTGAGGATCTGA+TGG | 0.617697 | 7_4:-54178452 | Msa1163110:CDS |
| TCACAAAACTAGAACAACAA+TGG | 0.626138 | 7_4:-54179167 | Msa1163110:CDS |
| TCATGCTCAGCCGTGGACGG+TGG | 0.627021 | 7_4:-54178547 | Msa1163110:CDS |
| TTTCTCACGAGCCGATGCGT+CGG | 0.628264 | 7_4:-54178674 | Msa1163110:CDS |
| TCATAACAAGGAATAAGCAA+AGG | 0.630651 | 7_4:+54178721 | None:intergenic |
| GGGAAGTTGGGAAGAAACGG+AGG | 0.634045 | 7_4:-54177954 | Msa1163110:CDS |
| GTGGTTGACATTGCTCTCGA+CGG | 0.634047 | 7_4:-54178358 | Msa1163110:CDS |
| CTAACAGTAACAGAATTGAG+AGG | 0.636540 | 7_4:-54177871 | Msa1163110:CDS |
| CCCGTCGGTGAATAGTGTTG+AGG | 0.647118 | 7_4:-54178461 | Msa1163110:CDS |
| TTAATCTTGCATGGACTAGG+TGG | 0.652888 | 7_4:+54177809 | None:intergenic |
| CGGCTTGAAGAGACTTGGAG+TGG | 0.655997 | 7_4:+54178600 | None:intergenic |
| GGCAGCGCCGGAGACAATGG+TGG | 0.663267 | 7_4:+54179077 | None:intergenic |
| CGCATTCTCAGCATTGACGG+CGG | 0.668863 | 7_4:-54179108 | Msa1163110:CDS |
| GTAAGCGGATCTGATCCTCA+AGG | 0.673540 | 7_4:+54179046 | None:intergenic |
| TGGCTATCAGTTTCACAATG+TGG | 0.673754 | 7_4:-54179147 | Msa1163110:CDS |
| TCGGCTCGTGAGAAAACGAA+CGG | 0.678847 | 7_4:+54178682 | None:intergenic |
| TCTACCAAATCCATCATCAG+TGG | 0.680119 | 7_4:+54178936 | None:intergenic |
| TAACAAGCGTGATTTCCCGT+CGG | 0.681674 | 7_4:-54178476 | Msa1163110:CDS |
| GGAACCGTACTGACTATGCG+AGG | 0.687220 | 7_4:-54178291 | Msa1163110:CDS |
| AGCGGATCTGATCCTCAAGG+TGG | 0.692396 | 7_4:+54179049 | None:intergenic |
| GAAGTCTTGAGATCATAACA+AGG | 0.736456 | 7_4:+54178709 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATAAAATGAAATCCGT+CGG | - | chr7_4:54178161-54178180 | Msa1163110:intron | 20.0% |
| !! | TTGAATATAATCATATGTGT+CGG | + | chr7_4:54178835-54178854 | None:intergenic | 20.0% |
| !!! | CTCAAAGTGATTAATTTTAA+CGG | - | chr7_4:54178995-54179014 | Msa1163110:CDS | 20.0% |
| !!! | TTTTATAAAATGAAATCCGT+CGG | - | chr7_4:54178161-54178180 | Msa1163110:intron | 20.0% |
| !! | TTGAATATAATCATATGTGT+CGG | + | chr7_4:54178835-54178854 | None:intergenic | 20.0% |
| !!! | CTCAAAGTGATTAATTTTAA+CGG | - | chr7_4:54178995-54179014 | Msa1163110:CDS | 20.0% |
| ! | GATAGAAAGTAGTAAAAAAC+AGG | - | chr7_4:54178952-54178971 | Msa1163110:CDS | 25.0% |
| !!! | ATTTTAACGGAGTGAATTAA+CGG | - | chr7_4:54179008-54179027 | Msa1163110:CDS | 25.0% |
| ! | GATAGAAAGTAGTAAAAAAC+AGG | - | chr7_4:54178952-54178971 | Msa1163110:CDS | 25.0% |
| !!! | ATTTTAACGGAGTGAATTAA+CGG | - | chr7_4:54179008-54179027 | Msa1163110:CDS | 25.0% |
| ! | CAAAACCGTTTTATCACTAA+TGG | - | chr7_4:54177803-54177822 | Msa1163110:CDS | 30.0% |
| AAGCTCCATTAGTGATAAAA+CGG | + | chr7_4:54177811-54177830 | None:intergenic | 30.0% | |
| TCACAAAACTAGAACAACAA+TGG | - | chr7_4:54177853-54177872 | Msa1163110:CDS | 30.0% | |
| TCATAACAAGGAATAAGCAA+AGG | + | chr7_4:54178302-54178321 | None:intergenic | 30.0% | |
| TGGAGAAAATTCACAACTAT+TGG | + | chr7_4:54178769-54178788 | None:intergenic | 30.0% | |
| AGAAGCAAAAGATACAAACA+CGG | + | chr7_4:54178901-54178920 | None:intergenic | 30.0% | |
| ! | CAAAACCGTTTTATCACTAA+TGG | - | chr7_4:54177803-54177822 | Msa1163110:CDS | 30.0% |
| AAGCTCCATTAGTGATAAAA+CGG | + | chr7_4:54177811-54177830 | None:intergenic | 30.0% | |
| TCACAAAACTAGAACAACAA+TGG | - | chr7_4:54177853-54177872 | Msa1163110:CDS | 30.0% | |
| TCATAACAAGGAATAAGCAA+AGG | + | chr7_4:54178302-54178321 | None:intergenic | 30.0% | |
| TGGAGAAAATTCACAACTAT+TGG | + | chr7_4:54178769-54178788 | None:intergenic | 30.0% | |
| AGAAGCAAAAGATACAAACA+CGG | + | chr7_4:54178901-54178920 | None:intergenic | 30.0% | |
| CTGTTAATTTCATTGCTGAC+AGG | - | chr7_4:54178129-54178148 | Msa1163110:intron | 35.0% | |
| ! | TTGTTGAAGCGAGTTTTTCA+AGG | - | chr7_4:54178230-54178249 | Msa1163110:intron | 35.0% |
| !! | TTTTCAAGGAAAAGAAAGCG+AGG | - | chr7_4:54178244-54178263 | Msa1163110:intron | 35.0% |
| TTTCAAGGAAAAGAAAGCGA+GGG | - | chr7_4:54178245-54178264 | Msa1163110:intron | 35.0% | |
| GAAGTCTTGAGATCATAACA+AGG | + | chr7_4:54178314-54178333 | None:intergenic | 35.0% | |
| ATTTCCCAACATCTGATCAA+CGG | + | chr7_4:54178699-54178718 | None:intergenic | 35.0% | |
| TGTTGGGAAATGCTTTCAAT+TGG | - | chr7_4:54178708-54178727 | Msa1163110:CDS | 35.0% | |
| ACGTCTTTCATCAGAAGTTA+TGG | + | chr7_4:54178789-54178808 | None:intergenic | 35.0% | |
| TTTCTGTCTAATGCACTGTT+TGG | - | chr7_4:54178926-54178945 | Msa1163110:CDS | 35.0% | |
| !! | TTAACGGTGTATTTTTGTGC+AGG | - | chr7_4:54179024-54179043 | Msa1163110:CDS | 35.0% |
| !! | TGTATTTTTGTGCAGGCATT+TGG | - | chr7_4:54179031-54179050 | Msa1163110:CDS | 35.0% |
| CTAACAGTAACAGAATTGAG+AGG | - | chr7_4:54179149-54179168 | Msa1163110:CDS | 35.0% | |
| CTGTTAATTTCATTGCTGAC+AGG | - | chr7_4:54178129-54178148 | Msa1163110:intron | 35.0% | |
| ! | TTGTTGAAGCGAGTTTTTCA+AGG | - | chr7_4:54178230-54178249 | Msa1163110:intron | 35.0% |
| !! | TTTTCAAGGAAAAGAAAGCG+AGG | - | chr7_4:54178244-54178263 | Msa1163110:intron | 35.0% |
| TTTCAAGGAAAAGAAAGCGA+GGG | - | chr7_4:54178245-54178264 | Msa1163110:intron | 35.0% | |
| GAAGTCTTGAGATCATAACA+AGG | + | chr7_4:54178314-54178333 | None:intergenic | 35.0% | |
| ATTTCCCAACATCTGATCAA+CGG | + | chr7_4:54178699-54178718 | None:intergenic | 35.0% | |
| TGTTGGGAAATGCTTTCAAT+TGG | - | chr7_4:54178708-54178727 | Msa1163110:CDS | 35.0% | |
| ACGTCTTTCATCAGAAGTTA+TGG | + | chr7_4:54178789-54178808 | None:intergenic | 35.0% | |
| TTTCTGTCTAATGCACTGTT+TGG | - | chr7_4:54178926-54178945 | Msa1163110:CDS | 35.0% | |
| !! | TTAACGGTGTATTTTTGTGC+AGG | - | chr7_4:54179024-54179043 | Msa1163110:CDS | 35.0% |
| !! | TGTATTTTTGTGCAGGCATT+TGG | - | chr7_4:54179031-54179050 | Msa1163110:CDS | 35.0% |
| CTAACAGTAACAGAATTGAG+AGG | - | chr7_4:54179149-54179168 | Msa1163110:CDS | 35.0% | |
| TGGCTATCAGTTTCACAATG+TGG | - | chr7_4:54177873-54177892 | Msa1163110:CDS | 40.0% | |
| ! | AATGCTGAGAATGCGAGTTT+TGG | + | chr7_4:54177907-54177926 | None:intergenic | 40.0% |
| !! | GAGCATCATTGGTTTGTAAG+CGG | + | chr7_4:54177992-54178011 | None:intergenic | 40.0% |
| GATTACTTCGACATCATCAC+CGG | - | chr7_4:54178026-54178045 | Msa1163110:intron | 40.0% | |
| !! | ATCACCACTGATGATGGATT+TGG | - | chr7_4:54178080-54178099 | Msa1163110:intron | 40.0% |
| TCTACCAAATCCATCATCAG+TGG | + | chr7_4:54178087-54178106 | None:intergenic | 40.0% | |
| TACTCTTCGTTGAGAATCTC+CGG | + | chr7_4:54178202-54178221 | None:intergenic | 40.0% | |
| GGGAAAATCGTTGACATTGA+AGG | - | chr7_4:54178265-54178284 | Msa1163110:intron | 40.0% | |
| CAAAGCTCGAAGTTGAAACT+TGG | + | chr7_4:54178377-54178396 | None:intergenic | 40.0% | |
| CAAGTTTCAACTTCGAGCTT+TGG | - | chr7_4:54178375-54178394 | Msa1163110:CDS | 40.0% | |
| !! | TGGTTTGGTGATGAACAATC+CGG | - | chr7_4:54178493-54178512 | Msa1163110:CDS | 40.0% |
| ! | GAATAGTGTTGAGGATCTGA+TGG | - | chr7_4:54178568-54178587 | Msa1163110:CDS | 40.0% |
| !!! | GATCTGATGGTTTTGTCCAT+CGG | - | chr7_4:54178581-54178600 | Msa1163110:CDS | 40.0% |
| !!! | ATGGTTTTGTCCATCGGAAA+CGG | - | chr7_4:54178587-54178606 | Msa1163110:CDS | 40.0% |
| AGAAACCGTTGATCAGATGT+TGG | - | chr7_4:54178691-54178710 | Msa1163110:CDS | 40.0% | |
| GAAACCGTTGATCAGATGTT+GGG | - | chr7_4:54178692-54178711 | Msa1163110:CDS | 40.0% | |
| ! | GTGTCGGTACATAATCTTGT+TGG | + | chr7_4:54178819-54178838 | None:intergenic | 40.0% |
| ! | TTTTGTGCAGGCATTTGGTT+TGG | - | chr7_4:54179036-54179055 | Msa1163110:CDS | 40.0% |
| ! | TTTGTGCAGGCATTTGGTTT+GGG | - | chr7_4:54179037-54179056 | Msa1163110:CDS | 40.0% |
| !! | GCATTTGGTTTGGGAGAAAA+GGG | - | chr7_4:54179046-54179065 | Msa1163110:CDS | 40.0% |
| TTTGGGAGAAAAGGGAAGTT+GGG | - | chr7_4:54179054-54179073 | Msa1163110:CDS | 40.0% | |
| AAAGGGAAGTTGGGAAGAAA+CGG | - | chr7_4:54179063-54179082 | Msa1163110:CDS | 40.0% | |
| ! | GGTGTTGAATGAGAGAGTAT+TGG | - | chr7_4:54179087-54179106 | Msa1163110:CDS | 40.0% |
| !! | TTAATCTTGCATGGACTAGG+TGG | + | chr7_4:54179214-54179233 | None:intergenic | 40.0% |
| ACTAACGGCTTAATCTTGCA+TGG | + | chr7_4:54179223-54179242 | None:intergenic | 40.0% | |
| TGGCTATCAGTTTCACAATG+TGG | - | chr7_4:54177873-54177892 | Msa1163110:CDS | 40.0% | |
| ! | AATGCTGAGAATGCGAGTTT+TGG | + | chr7_4:54177907-54177926 | None:intergenic | 40.0% |
| !! | GAGCATCATTGGTTTGTAAG+CGG | + | chr7_4:54177992-54178011 | None:intergenic | 40.0% |
| GATTACTTCGACATCATCAC+CGG | - | chr7_4:54178026-54178045 | Msa1163110:intron | 40.0% | |
| !! | ATCACCACTGATGATGGATT+TGG | - | chr7_4:54178080-54178099 | Msa1163110:intron | 40.0% |
| TCTACCAAATCCATCATCAG+TGG | + | chr7_4:54178087-54178106 | None:intergenic | 40.0% | |
| TACTCTTCGTTGAGAATCTC+CGG | + | chr7_4:54178202-54178221 | None:intergenic | 40.0% | |
| GGGAAAATCGTTGACATTGA+AGG | - | chr7_4:54178265-54178284 | Msa1163110:intron | 40.0% | |
| CAAAGCTCGAAGTTGAAACT+TGG | + | chr7_4:54178377-54178396 | None:intergenic | 40.0% | |
| CAAGTTTCAACTTCGAGCTT+TGG | - | chr7_4:54178375-54178394 | Msa1163110:CDS | 40.0% | |
| !! | TGGTTTGGTGATGAACAATC+CGG | - | chr7_4:54178493-54178512 | Msa1163110:CDS | 40.0% |
| ! | GAATAGTGTTGAGGATCTGA+TGG | - | chr7_4:54178568-54178587 | Msa1163110:CDS | 40.0% |
| !!! | GATCTGATGGTTTTGTCCAT+CGG | - | chr7_4:54178581-54178600 | Msa1163110:CDS | 40.0% |
| !!! | ATGGTTTTGTCCATCGGAAA+CGG | - | chr7_4:54178587-54178606 | Msa1163110:CDS | 40.0% |
| AGAAACCGTTGATCAGATGT+TGG | - | chr7_4:54178691-54178710 | Msa1163110:CDS | 40.0% | |
| GAAACCGTTGATCAGATGTT+GGG | - | chr7_4:54178692-54178711 | Msa1163110:CDS | 40.0% | |
| ! | GTGTCGGTACATAATCTTGT+TGG | + | chr7_4:54178819-54178838 | None:intergenic | 40.0% |
| ! | TTTTGTGCAGGCATTTGGTT+TGG | - | chr7_4:54179036-54179055 | Msa1163110:CDS | 40.0% |
| ! | TTTGTGCAGGCATTTGGTTT+GGG | - | chr7_4:54179037-54179056 | Msa1163110:CDS | 40.0% |
| !! | GCATTTGGTTTGGGAGAAAA+GGG | - | chr7_4:54179046-54179065 | Msa1163110:CDS | 40.0% |
| TTTGGGAGAAAAGGGAAGTT+GGG | - | chr7_4:54179054-54179073 | Msa1163110:CDS | 40.0% | |
| AAAGGGAAGTTGGGAAGAAA+CGG | - | chr7_4:54179063-54179082 | Msa1163110:CDS | 40.0% | |
| ! | GGTGTTGAATGAGAGAGTAT+TGG | - | chr7_4:54179087-54179106 | Msa1163110:CDS | 40.0% |
| !! | TTAATCTTGCATGGACTAGG+TGG | + | chr7_4:54179214-54179233 | None:intergenic | 40.0% |
| ACTAACGGCTTAATCTTGCA+TGG | + | chr7_4:54179223-54179242 | None:intergenic | 40.0% | |
| ! | ACTCGCATTCTCAGCATTGA+CGG | - | chr7_4:54177909-54177928 | Msa1163110:CDS | 45.0% |
| !! | CTGATCCTCAAGGTGGATTA+AGG | + | chr7_4:54177967-54177986 | None:intergenic | 45.0% |
| GATTTGAGCGTGAGCATCAT+TGG | + | chr7_4:54178003-54178022 | None:intergenic | 45.0% | |
| TGATGCTCACGCTCAAATCA+CGG | - | chr7_4:54178004-54178023 | Msa1163110:intron | 45.0% | |
| GCAATGATCACCACTGATGA+TGG | - | chr7_4:54178074-54178093 | Msa1163110:intron | 45.0% | |
| GCATCTCTAGCAGTATAGAG+AGG | + | chr7_4:54178110-54178129 | None:intergenic | 45.0% | |
| TAACAAGCGTGATTTCCCGT+CGG | - | chr7_4:54178544-54178563 | Msa1163110:CDS | 45.0% | |
| TCCTCAACACTATTCACCGA+CGG | + | chr7_4:54178563-54178582 | None:intergenic | 45.0% | |
| TCGTGAATGTTCAACGTCGA+CGG | - | chr7_4:54178640-54178659 | Msa1163110:CDS | 45.0% | |
| GAATCCTCGCATAGTCAGTA+CGG | + | chr7_4:54178736-54178755 | None:intergenic | 45.0% | |
| ! | TACTGACTATGCGAGGATTC+AGG | - | chr7_4:54178736-54178755 | Msa1163110:CDS | 45.0% |
| CTTCTGATGAAAGACGTGTC+TGG | - | chr7_4:54178792-54178811 | Msa1163110:CDS | 45.0% | |
| !! | GGCATTTGGTTTGGGAGAAA+AGG | - | chr7_4:54179045-54179064 | Msa1163110:CDS | 45.0% |
| GTTTGGGAGAAAAGGGAAGT+TGG | - | chr7_4:54179053-54179072 | Msa1163110:CDS | 45.0% | |
| GTATTGGAGTCGTTACCGTT+TGG | - | chr7_4:54179103-54179122 | Msa1163110:CDS | 45.0% | |
| AGTAACCGTTTCCCACCAAA+CGG | + | chr7_4:54179121-54179140 | None:intergenic | 45.0% | |
| GGCTTAATCTTGCATGGACT+AGG | + | chr7_4:54179217-54179236 | None:intergenic | 45.0% | |
| ! | ACTCGCATTCTCAGCATTGA+CGG | - | chr7_4:54177909-54177928 | Msa1163110:CDS | 45.0% |
| !! | CTGATCCTCAAGGTGGATTA+AGG | + | chr7_4:54177967-54177986 | None:intergenic | 45.0% |
| GATTTGAGCGTGAGCATCAT+TGG | + | chr7_4:54178003-54178022 | None:intergenic | 45.0% | |
| TGATGCTCACGCTCAAATCA+CGG | - | chr7_4:54178004-54178023 | Msa1163110:intron | 45.0% | |
| GCAATGATCACCACTGATGA+TGG | - | chr7_4:54178074-54178093 | Msa1163110:intron | 45.0% | |
| GCATCTCTAGCAGTATAGAG+AGG | + | chr7_4:54178110-54178129 | None:intergenic | 45.0% | |
| TAACAAGCGTGATTTCCCGT+CGG | - | chr7_4:54178544-54178563 | Msa1163110:CDS | 45.0% | |
| TCCTCAACACTATTCACCGA+CGG | + | chr7_4:54178563-54178582 | None:intergenic | 45.0% | |
| TCGTGAATGTTCAACGTCGA+CGG | - | chr7_4:54178640-54178659 | Msa1163110:CDS | 45.0% | |
| GAATCCTCGCATAGTCAGTA+CGG | + | chr7_4:54178736-54178755 | None:intergenic | 45.0% | |
| ! | TACTGACTATGCGAGGATTC+AGG | - | chr7_4:54178736-54178755 | Msa1163110:CDS | 45.0% |
| CTTCTGATGAAAGACGTGTC+TGG | - | chr7_4:54178792-54178811 | Msa1163110:CDS | 45.0% | |
| !! | GGCATTTGGTTTGGGAGAAA+AGG | - | chr7_4:54179045-54179064 | Msa1163110:CDS | 45.0% |
| GTTTGGGAGAAAAGGGAAGT+TGG | - | chr7_4:54179053-54179072 | Msa1163110:CDS | 45.0% | |
| GTATTGGAGTCGTTACCGTT+TGG | - | chr7_4:54179103-54179122 | Msa1163110:CDS | 45.0% | |
| AGTAACCGTTTCCCACCAAA+CGG | + | chr7_4:54179121-54179140 | None:intergenic | 45.0% | |
| GGCTTAATCTTGCATGGACT+AGG | + | chr7_4:54179217-54179236 | None:intergenic | 45.0% | |
| GTAAGCGGATCTGATCCTCA+AGG | + | chr7_4:54177977-54177996 | None:intergenic | 50.0% | |
| TATTGCACCAATGCCAGTGC+CGG | + | chr7_4:54178048-54178067 | None:intergenic | 50.0% | |
| !! | AATCCGTCGGTGTTTTTCGC+CGG | - | chr7_4:54178174-54178193 | Msa1163110:intron | 50.0% |
| ! | TCGGCTCGTGAGAAAACGAA+CGG | + | chr7_4:54178341-54178360 | None:intergenic | 50.0% |
| TGGAACGGCTTGAAGAGACT+TGG | + | chr7_4:54178428-54178447 | None:intergenic | 50.0% | |
| ! | GCATGAGGTTTTTCCGTCGA+CGG | + | chr7_4:54178459-54178478 | None:intergenic | 50.0% |
| AAAAACCTCATGCTCAGCCG+TGG | - | chr7_4:54178466-54178485 | Msa1163110:CDS | 50.0% | |
| CCTCAACACTATTCACCGAC+GGG | + | chr7_4:54178562-54178581 | None:intergenic | 50.0% | |
| TGAATGTTCAACGTCGACGG+TGG | - | chr7_4:54178643-54178662 | Msa1163110:CDS | 50.0% | |
| GTGGTTGACATTGCTCTCGA+CGG | - | chr7_4:54178662-54178681 | Msa1163110:CDS | 50.0% | |
| TTGGAGTCGTTACCGTTTGG+TGG | - | chr7_4:54179106-54179125 | Msa1163110:CDS | 50.0% | |
| TGGAGTCGTTACCGTTTGGT+GGG | - | chr7_4:54179107-54179126 | Msa1163110:CDS | 50.0% | |
| ! | CGTTACCGTTTGGTGGGAAA+CGG | - | chr7_4:54179113-54179132 | Msa1163110:CDS | 50.0% |
| ! | GTGCAACGTCTTGTTGCTAC+TGG | - | chr7_4:54179175-54179194 | Msa1163110:CDS | 50.0% |
| GTAAGCGGATCTGATCCTCA+AGG | + | chr7_4:54177977-54177996 | None:intergenic | 50.0% | |
| TATTGCACCAATGCCAGTGC+CGG | + | chr7_4:54178048-54178067 | None:intergenic | 50.0% | |
| !! | AATCCGTCGGTGTTTTTCGC+CGG | - | chr7_4:54178174-54178193 | Msa1163110:intron | 50.0% |
| ! | TCGGCTCGTGAGAAAACGAA+CGG | + | chr7_4:54178341-54178360 | None:intergenic | 50.0% |
| TGGAACGGCTTGAAGAGACT+TGG | + | chr7_4:54178428-54178447 | None:intergenic | 50.0% | |
| ! | GCATGAGGTTTTTCCGTCGA+CGG | + | chr7_4:54178459-54178478 | None:intergenic | 50.0% |
| AAAAACCTCATGCTCAGCCG+TGG | - | chr7_4:54178466-54178485 | Msa1163110:CDS | 50.0% | |
| CCTCAACACTATTCACCGAC+GGG | + | chr7_4:54178562-54178581 | None:intergenic | 50.0% | |
| TGAATGTTCAACGTCGACGG+TGG | - | chr7_4:54178643-54178662 | Msa1163110:CDS | 50.0% | |
| GTGGTTGACATTGCTCTCGA+CGG | - | chr7_4:54178662-54178681 | Msa1163110:CDS | 50.0% | |
| TTGGAGTCGTTACCGTTTGG+TGG | - | chr7_4:54179106-54179125 | Msa1163110:CDS | 50.0% | |
| TGGAGTCGTTACCGTTTGGT+GGG | - | chr7_4:54179107-54179126 | Msa1163110:CDS | 50.0% | |
| ! | CGTTACCGTTTGGTGGGAAA+CGG | - | chr7_4:54179113-54179132 | Msa1163110:CDS | 50.0% |
| ! | GTGCAACGTCTTGTTGCTAC+TGG | - | chr7_4:54179175-54179194 | Msa1163110:CDS | 50.0% |
| !! | CGCATTCTCAGCATTGACGG+CGG | - | chr7_4:54177912-54177931 | Msa1163110:CDS | 55.0% |
| !! | ATTCTCAGCATTGACGGCGG+AGG | - | chr7_4:54177915-54177934 | Msa1163110:CDS | 55.0% |
| GGAACCACCACCATTGTCTC+CGG | - | chr7_4:54177936-54177955 | Msa1163110:CDS | 55.0% | |
| !! | AAGGTGGATTAAGGCAGCGC+CGG | + | chr7_4:54177958-54177977 | None:intergenic | 55.0% |
| CGCTGCCTTAATCCACCTTG+AGG | - | chr7_4:54177959-54177978 | Msa1163110:CDS | 55.0% | |
| AGCGGATCTGATCCTCAAGG+TGG | + | chr7_4:54177974-54177993 | None:intergenic | 55.0% | |
| TTCGACATCATCACCGGCAC+TGG | - | chr7_4:54178032-54178051 | Msa1163110:intron | 55.0% | |
| !! | ATCATCACCGGCACTGGCAT+TGG | - | chr7_4:54178038-54178057 | Msa1163110:intron | 55.0% |
| TTTCTCACGAGCCGATGCGT+CGG | - | chr7_4:54178346-54178365 | Msa1163110:CDS | 55.0% | |
| CGGCTTGAAGAGACTTGGAG+TGG | + | chr7_4:54178423-54178442 | None:intergenic | 55.0% | |
| TCGACGGAAGCGAACTGGAA+CGG | + | chr7_4:54178443-54178462 | None:intergenic | 55.0% | |
| TTCCAGTTCGCTTCCGTCGA+CGG | - | chr7_4:54178443-54178462 | Msa1163110:CDS | 55.0% | |
| CATCACCAAACCACCGTCCA+CGG | + | chr7_4:54178486-54178505 | None:intergenic | 55.0% | |
| GATGAACAATCCGGCAGCAG+CGG | - | chr7_4:54178502-54178521 | Msa1163110:CDS | 55.0% | |
| CCCGTCGGTGAATAGTGTTG+AGG | - | chr7_4:54178559-54178578 | Msa1163110:CDS | 55.0% | |
| TCACGACGCATTCTGTTCGC+TGG | + | chr7_4:54178617-54178636 | None:intergenic | 55.0% | |
| !! | GGAACCGTACTGACTATGCG+AGG | - | chr7_4:54178729-54178748 | Msa1163110:CDS | 55.0% |
| GGGAAGTTGGGAAGAAACGG+AGG | - | chr7_4:54179066-54179085 | Msa1163110:CDS | 55.0% | |
| !! | CGCATTCTCAGCATTGACGG+CGG | - | chr7_4:54177912-54177931 | Msa1163110:CDS | 55.0% |
| !! | ATTCTCAGCATTGACGGCGG+AGG | - | chr7_4:54177915-54177934 | Msa1163110:CDS | 55.0% |
| GGAACCACCACCATTGTCTC+CGG | - | chr7_4:54177936-54177955 | Msa1163110:CDS | 55.0% | |
| !! | AAGGTGGATTAAGGCAGCGC+CGG | + | chr7_4:54177958-54177977 | None:intergenic | 55.0% |
| CGCTGCCTTAATCCACCTTG+AGG | - | chr7_4:54177959-54177978 | Msa1163110:CDS | 55.0% | |
| AGCGGATCTGATCCTCAAGG+TGG | + | chr7_4:54177974-54177993 | None:intergenic | 55.0% | |
| TTCGACATCATCACCGGCAC+TGG | - | chr7_4:54178032-54178051 | Msa1163110:intron | 55.0% | |
| !! | ATCATCACCGGCACTGGCAT+TGG | - | chr7_4:54178038-54178057 | Msa1163110:intron | 55.0% |
| TTTCTCACGAGCCGATGCGT+CGG | - | chr7_4:54178346-54178365 | Msa1163110:CDS | 55.0% | |
| CGGCTTGAAGAGACTTGGAG+TGG | + | chr7_4:54178423-54178442 | None:intergenic | 55.0% | |
| TCGACGGAAGCGAACTGGAA+CGG | + | chr7_4:54178443-54178462 | None:intergenic | 55.0% | |
| TTCCAGTTCGCTTCCGTCGA+CGG | - | chr7_4:54178443-54178462 | Msa1163110:CDS | 55.0% | |
| CATCACCAAACCACCGTCCA+CGG | + | chr7_4:54178486-54178505 | None:intergenic | 55.0% | |
| GATGAACAATCCGGCAGCAG+CGG | - | chr7_4:54178502-54178521 | Msa1163110:CDS | 55.0% | |
| CCCGTCGGTGAATAGTGTTG+AGG | - | chr7_4:54178559-54178578 | Msa1163110:CDS | 55.0% | |
| TCACGACGCATTCTGTTCGC+TGG | + | chr7_4:54178617-54178636 | None:intergenic | 55.0% | |
| !! | GGAACCGTACTGACTATGCG+AGG | - | chr7_4:54178729-54178748 | Msa1163110:CDS | 55.0% |
| GGGAAGTTGGGAAGAAACGG+AGG | - | chr7_4:54179066-54179085 | Msa1163110:CDS | 55.0% | |
| ! | TAAGGCAGCGCCGGAGACAA+TGG | + | chr7_4:54177949-54177968 | None:intergenic | 60.0% |
| TCGTTGAGAATCTCCGGCGC+CGG | + | chr7_4:54178196-54178215 | None:intergenic | 60.0% | |
| ACTTGGCGACTCCGACGCAT+CGG | + | chr7_4:54178360-54178379 | None:intergenic | 60.0% | |
| TTCCGTCGACGGAAGCGAAC+TGG | + | chr7_4:54178448-54178467 | None:intergenic | 60.0% | |
| ACCTCATGCTCAGCCGTGGA+CGG | - | chr7_4:54178470-54178489 | Msa1163110:CDS | 60.0% | |
| ! | TAAGGCAGCGCCGGAGACAA+TGG | + | chr7_4:54177949-54177968 | None:intergenic | 60.0% |
| TCGTTGAGAATCTCCGGCGC+CGG | + | chr7_4:54178196-54178215 | None:intergenic | 60.0% | |
| ACTTGGCGACTCCGACGCAT+CGG | + | chr7_4:54178360-54178379 | None:intergenic | 60.0% | |
| TTCCGTCGACGGAAGCGAAC+TGG | + | chr7_4:54178448-54178467 | None:intergenic | 60.0% | |
| ACCTCATGCTCAGCCGTGGA+CGG | - | chr7_4:54178470-54178489 | Msa1163110:CDS | 60.0% | |
| ! | AGCGCCGGAGACAATGGTGG+TGG | + | chr7_4:54177943-54177962 | None:intergenic | 65.0% |
| ! | GCGCCGGCGAAAAACACCGA+CGG | + | chr7_4:54178180-54178199 | None:intergenic | 65.0% |
| !! | TCGGTGTTTTTCGCCGGCGC+CGG | - | chr7_4:54178180-54178199 | Msa1163110:intron | 65.0% |
| ACCGTCCACGGCTGAGCATG+AGG | + | chr7_4:54178474-54178493 | None:intergenic | 65.0% | |
| TCATGCTCAGCCGTGGACGG+TGG | - | chr7_4:54178473-54178492 | Msa1163110:CDS | 65.0% | |
| CTCAGCCGTGGACGGTGGTT+TGG | - | chr7_4:54178478-54178497 | Msa1163110:CDS | 65.0% | |
| TGCGTAACAGCCGCTGCTGC+CGG | + | chr7_4:54178515-54178534 | None:intergenic | 65.0% | |
| CGCTGGTGCTCCGTTTCCGA+TGG | + | chr7_4:54178600-54178619 | None:intergenic | 65.0% | |
| ! | AGCGCCGGAGACAATGGTGG+TGG | + | chr7_4:54177943-54177962 | None:intergenic | 65.0% |
| ! | GCGCCGGCGAAAAACACCGA+CGG | + | chr7_4:54178180-54178199 | None:intergenic | 65.0% |
| !! | TCGGTGTTTTTCGCCGGCGC+CGG | - | chr7_4:54178180-54178199 | Msa1163110:intron | 65.0% |
| ACCGTCCACGGCTGAGCATG+AGG | + | chr7_4:54178474-54178493 | None:intergenic | 65.0% | |
| TCATGCTCAGCCGTGGACGG+TGG | - | chr7_4:54178473-54178492 | Msa1163110:CDS | 65.0% | |
| CTCAGCCGTGGACGGTGGTT+TGG | - | chr7_4:54178478-54178497 | Msa1163110:CDS | 65.0% | |
| TGCGTAACAGCCGCTGCTGC+CGG | + | chr7_4:54178515-54178534 | None:intergenic | 65.0% | |
| CGCTGGTGCTCCGTTTCCGA+TGG | + | chr7_4:54178600-54178619 | None:intergenic | 65.0% | |
| ! | GGCAGCGCCGGAGACAATGG+TGG | + | chr7_4:54177946-54177965 | None:intergenic | 70.0% |
| ! | GGCAGCGCCGGAGACAATGG+TGG | + | chr7_4:54177946-54177965 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 54177790 | 54179252 | 54177790 | ID=Msa1163110;Name=Msa1163110 |
| chr7_4 | mRNA | 54177790 | 54179252 | 54177790 | ID=Msa1163110-mRNA-1;Parent=Msa1163110;Name=Msa1163110-mRNA-1;_AED=0.00;_eAED=0.00;_QI=32|1|0.5|1|1|1|2|0|380 |
| chr7_4 | exon | 54177790 | 54177996 | 54177790 | ID=Msa1163110-mRNA-1:exon:15682;Parent=Msa1163110-mRNA-1 |
| chr7_4 | exon | 54178285 | 54179252 | 54178285 | ID=Msa1163110-mRNA-1:exon:15681;Parent=Msa1163110-mRNA-1 |
| chr7_4 | five_prime_UTR | 54179221 | 54179252 | 54179221 | ID=Msa1163110-mRNA-1:five_prime_utr;Parent=Msa1163110-mRNA-1 |
| chr7_4 | CDS | 54178285 | 54179220 | 54178285 | ID=Msa1163110-mRNA-1:cds;Parent=Msa1163110-mRNA-1 |
| chr7_4 | CDS | 54177790 | 54177996 | 54177790 | ID=Msa1163110-mRNA-1:cds;Parent=Msa1163110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
