Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165560 | XP_003625978.1 | 94.098 | 305 | 13 | 1 | 3 | 307 | 2 | 301 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165560 | sp|Q9S834|CLPP5_ARATH | 77.551 | 294 | 60 | 4 | 5 | 298 | 11 | 298 | 8.44e-160 | 450 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165560 | G7KSU5 | 94.098 | 305 | 13 | 1 | 3 | 307 | 2 | 301 | 0.0 | 587 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0089700 | Msa1165560 | 0.805769 | 1.137539e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165560 | MtrunA17_Chr7g0270061 | 94.098 | 305 | 13 | 1 | 3 | 307 | 2 | 301 | 0.0 | 587 |
| Msa1165560 | MtrunA17_Chr1g0194601 | 86.770 | 257 | 30 | 2 | 49 | 305 | 50 | 302 | 1.96e-164 | 459 |
| Msa1165560 | MtrunA17_Chr7g0251451 | 50.673 | 223 | 92 | 4 | 81 | 299 | 57 | 265 | 5.07e-70 | 219 |
| Msa1165560 | MtrunA17_Chr4g0038261 | 45.701 | 221 | 114 | 1 | 92 | 306 | 17 | 237 | 1.02e-61 | 196 |
| Msa1165560 | MtrunA17_Chr5g0409311 | 52.096 | 167 | 80 | 0 | 119 | 285 | 93 | 259 | 4.29e-57 | 186 |
| Msa1165560 | MtrunA17_Chr4g0034751 | 48.521 | 169 | 87 | 0 | 117 | 285 | 102 | 270 | 8.75e-52 | 171 |
| Msa1165560 | MtrunA17_Chr4g0056771 | 37.113 | 194 | 117 | 1 | 92 | 285 | 78 | 266 | 1.53e-41 | 145 |
| Msa1165560 | MtrunA17_Chr4g0055551 | 38.144 | 194 | 105 | 2 | 102 | 287 | 99 | 285 | 1.22e-30 | 117 |
| Msa1165560 | MtrunA17_Chr7g0272191 | 33.333 | 174 | 105 | 3 | 123 | 285 | 119 | 292 | 1.76e-26 | 106 |
| Msa1165560 | MtrunA17_Chr4g0015831 | 44.330 | 97 | 54 | 0 | 117 | 213 | 25 | 121 | 7.81e-25 | 96.7 |
| Msa1165560 | MtrunA17_CPg0492721 | 44.330 | 97 | 54 | 0 | 117 | 213 | 25 | 121 | 7.81e-25 | 96.7 |
| Msa1165560 | MtrunA17_Chr1g0207341 | 32.961 | 179 | 110 | 2 | 117 | 285 | 158 | 336 | 7.32e-21 | 91.7 |
| Msa1165560 | MtrunA17_Chr1g0184041 | 43.000 | 100 | 44 | 1 | 128 | 227 | 100 | 186 | 9.72e-21 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165560 | AT1G02560.1 | 77.551 | 294 | 60 | 4 | 5 | 298 | 11 | 298 | 8.58e-161 | 450 |
| Msa1165560 | AT1G66670.1 | 51.309 | 191 | 93 | 0 | 95 | 285 | 66 | 256 | 1.15e-64 | 206 |
| Msa1165560 | AT5G45390.1 | 50.267 | 187 | 92 | 1 | 115 | 300 | 80 | 266 | 2.31e-60 | 194 |
| Msa1165560 | AT5G23140.1 | 48.108 | 185 | 95 | 1 | 110 | 293 | 44 | 228 | 2.22e-58 | 187 |
| Msa1165560 | AT1G11750.1 | 42.714 | 199 | 109 | 1 | 92 | 285 | 69 | 267 | 1.65e-49 | 166 |
| Msa1165560 | AT1G11750.2 | 46.746 | 169 | 90 | 0 | 117 | 285 | 117 | 285 | 6.97e-49 | 165 |
| Msa1165560 | ATCG00670.1 | 37.824 | 193 | 114 | 2 | 93 | 284 | 6 | 193 | 1.42e-45 | 153 |
| Msa1165560 | AT1G12410.1 | 39.655 | 174 | 105 | 0 | 115 | 288 | 90 | 263 | 7.05e-41 | 144 |
| Msa1165560 | AT4G17040.1 | 38.660 | 194 | 104 | 2 | 102 | 287 | 100 | 286 | 1.06e-36 | 133 |
| Msa1165560 | AT1G09130.2 | 36.667 | 180 | 103 | 2 | 117 | 285 | 124 | 303 | 1.19e-32 | 123 |
| Msa1165560 | AT1G09130.1 | 36.667 | 180 | 103 | 2 | 117 | 285 | 124 | 303 | 1.19e-32 | 123 |
| Msa1165560 | AT1G09130.3 | 36.667 | 180 | 103 | 2 | 117 | 285 | 124 | 303 | 2.65e-32 | 123 |
| Msa1165560 | AT1G49970.1 | 33.708 | 178 | 108 | 2 | 117 | 284 | 174 | 351 | 4.43e-23 | 98.6 |
Find 101 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTTCACCAGTAGCATTT+TGG | 0.128478 | 7_4:-57507878 | None:intergenic |
| TACTTTGATTTGCAGGAAAT+TGG | 0.149092 | 7_4:+57504472 | Msa1165560:intron |
| TGAATCATTATCCTCGAATT+TGG | 0.187153 | 7_4:-57506330 | None:intergenic |
| GAAGAAGAAGTAGGGGTTAA+TGG | 0.205782 | 7_4:-57504213 | None:intergenic |
| AGAATTTAAGTCATGGAATT+TGG | 0.239916 | 7_4:+57504579 | Msa1165560:CDS |
| AGTCATCCATATAGTGAAAT+TGG | 0.250622 | 7_4:+57507794 | Msa1165560:three_prime_UTR |
| AATAATCCAATTTCACTATA+TGG | 0.274820 | 7_4:-57507800 | None:intergenic |
| GCAAACTGACATAGATATTC+AGG | 0.327655 | 7_4:+57506380 | Msa1165560:CDS |
| TAAACTTTGACCAGTTTGAT+AGG | 0.339155 | 7_4:-57507443 | None:intergenic |
| GCAAAAGAAGCCAAAGAGTA+TGG | 0.350032 | 7_4:+57507508 | Msa1165560:CDS |
| ACCCATTCAAGTTAGCCTTA+TGG | 0.363359 | 7_4:-57507414 | None:intergenic |
| GTCTATGAGTCCATACTCTT+TGG | 0.366650 | 7_4:-57507518 | None:intergenic |
| AAGAAGAAGTAGGGGTTAAT+GGG | 0.373458 | 7_4:-57504212 | None:intergenic |
| CTGCAGCCAAAGTTAATGAT+AGG | 0.377004 | 7_4:+57507584 | Msa1165560:CDS |
| CACCCTCTTCCCGCTTCTCC+TGG | 0.377145 | 7_4:+57504274 | Msa1165560:CDS |
| TGTGCATGTACAGGGAAATA+AGG | 0.377389 | 7_4:-57504979 | None:intergenic |
| CAACCGCTTGGTGGGTTTCA+AGG | 0.395625 | 7_4:+57506354 | Msa1165560:CDS |
| CACCATAAGGCTAACTTGAA+TGG | 0.402639 | 7_4:+57507412 | Msa1165560:CDS |
| ACTTTGATTTGCAGGAAATT+GGG | 0.404238 | 7_4:+57504473 | Msa1165560:intron |
| TCCATGACTTAAATTCTTGT+CGG | 0.405289 | 7_4:-57504573 | None:intergenic |
| GTCATGGAATTTGGTCCATC+AGG | 0.413558 | 7_4:+57504588 | Msa1165560:CDS |
| AAGAGAAAGAAGAAGAAGTA+GGG | 0.419714 | 7_4:-57504221 | None:intergenic |
| AAAGCAAATCGAATGAATAA+TGG | 0.428088 | 7_4:+57504149 | Msa1165560:exon |
| ACTTAAATTCTTGTCGGTCT+CGG | 0.429688 | 7_4:-57504567 | None:intergenic |
| CCTTGTCCTTGTGCATGTAC+AGG | 0.430907 | 7_4:-57504988 | None:intergenic |
| GAAGAGAAAGAAGAAGAAGT+AGG | 0.438868 | 7_4:-57504222 | None:intergenic |
| CTAATGGCTGGAGAGCTTTG+AGG | 0.445476 | 7_4:-57507558 | None:intergenic |
| GGGTATCTGTCCTATCAAAC+TGG | 0.451266 | 7_4:+57507433 | Msa1165560:CDS |
| AAATGAAATGCTGCACCATA+AGG | 0.459350 | 7_4:+57507399 | Msa1165560:CDS |
| AAAATCATGAAAATTTGAAC+GGG | 0.468064 | 7_4:-57507752 | None:intergenic |
| GCTAGCCCTATCATTAACTT+TGG | 0.469138 | 7_4:-57507590 | None:intergenic |
| TGGAAACGCTCCTGCACCAT+TGG | 0.472150 | 7_4:-57505018 | None:intergenic |
| ACTTTGGCTGCAGATGCTAA+TGG | 0.473963 | 7_4:-57507574 | None:intergenic |
| GATGAAGAACATACCTTGCT+AGG | 0.476147 | 7_4:-57505248 | None:intergenic |
| ACCATAAGGCTAACTTGAAT+GGG | 0.485952 | 7_4:+57507413 | Msa1165560:CDS |
| AATAGTTTACCAGGAGAAGC+GGG | 0.486336 | 7_4:-57504283 | None:intergenic |
| CGCTCCTGCACCATTGGTGG+TGG | 0.490771 | 7_4:-57505012 | None:intergenic |
| CGCTTGGTGGGTTTCAAGGA+GGG | 0.502226 | 7_4:+57506358 | Msa1165560:CDS |
| TAATGGCTGGAGAGCTTTGA+GGG | 0.505532 | 7_4:-57507557 | None:intergenic |
| AGGACCGGTTGATGATGATA+TGG | 0.508296 | 7_4:+57505181 | Msa1165560:CDS |
| AAACGCTCCTGCACCATTGG+TGG | 0.509404 | 7_4:-57505015 | None:intergenic |
| GTCATGTATGTAAATTCTCC+AGG | 0.509867 | 7_4:+57505504 | Msa1165560:CDS |
| GATGTGTCCACTGTTTGTGT+TGG | 0.516311 | 7_4:+57505711 | Msa1165560:CDS |
| ACACAAACAGTGGACACATC+AGG | 0.523363 | 7_4:-57505708 | None:intergenic |
| AATAGTACGTTGTGGAGGAC+CGG | 0.526160 | 7_4:+57505166 | Msa1165560:CDS |
| ATGATTCATCAACCGCTTGG+TGG | 0.526363 | 7_4:+57506345 | Msa1165560:CDS |
| TTACCAGGAGAAGCGGGAAG+AGG | 0.531406 | 7_4:-57504277 | None:intergenic |
| AAGAGGGTGAAGCAAAAGAA+AGG | 0.531659 | 7_4:-57504260 | None:intergenic |
| AGTAGAGGCAAATCGAATAG+AGG | 0.532461 | 7_4:-57504181 | None:intergenic |
| ATCATTCTTACTTAACCCTA+CGG | 0.534161 | 7_4:-57507653 | None:intergenic |
| CTGCTAAGCGCTGGGACCAA+AGG | 0.535143 | 7_4:+57506136 | Msa1165560:CDS |
| GATACAGCTTGCCAAATTCG+AGG | 0.535874 | 7_4:+57506319 | Msa1165560:CDS |
| CTTTCGGGCACAATTTCACA+TGG | 0.539195 | 7_4:-57507696 | None:intergenic |
| TACCAGGAGAAGCGGGAAGA+GGG | 0.540854 | 7_4:-57504276 | None:intergenic |
| CTTGTCCTTGTGCATGTACA+GGG | 0.544692 | 7_4:-57504987 | None:intergenic |
| TGATTCATCAACCGCTTGGT+GGG | 0.547954 | 7_4:+57506346 | Msa1165560:CDS |
| AAAATCTGATTTGAAGGCGA+AGG | 0.548725 | 7_4:+57504517 | Msa1165560:CDS |
| CCAGCTGTAACTGATCCTCC+TGG | 0.549054 | 7_4:-57505522 | None:intergenic |
| TTGGCCATATCATCATCAAC+CGG | 0.549859 | 7_4:-57505185 | None:intergenic |
| TGGCGATATTTGATACTATG+AGG | 0.550197 | 7_4:+57505676 | Msa1165560:CDS |
| AGAGGGTGAAGCAAAAGAAA+GGG | 0.553963 | 7_4:-57504259 | None:intergenic |
| TCCCAAAATGCTACTGGTGA+AGG | 0.554706 | 7_4:+57507876 | Msa1165560:three_prime_UTR |
| AGAGAAAGAAGAAGAAGTAG+GGG | 0.557792 | 7_4:-57504220 | None:intergenic |
| CCAGGAGGATCAGTTACAGC+TGG | 0.558166 | 7_4:+57505522 | Msa1165560:CDS |
| GTACTGTCCCAAAATGCTAC+TGG | 0.558945 | 7_4:+57507870 | Msa1165560:three_prime_UTR |
| AGGACCACCACCAATGGTGC+AGG | 0.560104 | 7_4:+57505008 | Msa1165560:CDS |
| TGCAGCCAAAGTTAATGATA+GGG | 0.564539 | 7_4:+57507585 | Msa1165560:CDS |
| AAGCTGAGAAACTATGATGT+TGG | 0.567660 | 7_4:-57505204 | None:intergenic |
| GCTTCTTTACCTTGATGCCG+TGG | 0.580342 | 7_4:+57505223 | Msa1165560:CDS |
| ATTTCACATGGATATCAACA+TGG | 0.580647 | 7_4:-57507684 | None:intergenic |
| AAATAGTTTACCAGGAGAAG+CGG | 0.582411 | 7_4:-57504284 | None:intergenic |
| TGGCTGCAGATGCTAATGGC+TGG | 0.583015 | 7_4:-57507570 | None:intergenic |
| TTTGTGTTGGATTAGCAGCA+AGG | 0.587673 | 7_4:+57505724 | Msa1165560:CDS |
| TGCTAGGATCCACGGCATCA+AGG | 0.594262 | 7_4:-57505232 | None:intergenic |
| CCTGTACATGCACAAGGACA+AGG | 0.594438 | 7_4:+57504988 | Msa1165560:CDS |
| CTCATTAGATGAAATTAACG+TGG | 0.594611 | 7_4:+57507932 | Msa1165560:three_prime_UTR |
| AAAGCTGACTAATAACACTC+TGG | 0.595346 | 7_4:-57505038 | None:intergenic |
| AAGCAAAAGAAAGGGTGTGA+GGG | 0.596629 | 7_4:-57504251 | None:intergenic |
| ATAATGATTCATCAACCGCT+TGG | 0.597203 | 7_4:+57506342 | Msa1165560:CDS |
| ACCGACAAGAATTTAAGTCA+TGG | 0.599044 | 7_4:+57504572 | Msa1165560:CDS |
| ACATACCTTGCTAGGATCCA+CGG | 0.599152 | 7_4:-57505240 | None:intergenic |
| AGGACAAGGACCACCACCAA+TGG | 0.602548 | 7_4:+57505002 | Msa1165560:CDS |
| CCGCTTGGTGGGTTTCAAGG+AGG | 0.611234 | 7_4:+57506357 | Msa1165560:CDS |
| ACAGGGAAATAAGGAGAAGA+CGG | 0.611242 | 7_4:-57504970 | None:intergenic |
| CAGGGAAATAAGGAGAAGAC+GGG | 0.611607 | 7_4:-57504969 | None:intergenic |
| TGATGCCGTGGATCCTAGCA+AGG | 0.623928 | 7_4:+57505235 | Msa1165560:CDS |
| TTGATTTGCAGGAAATTGGG+AGG | 0.628312 | 7_4:+57504476 | Msa1165560:intron |
| GAAGCAAAAGAAAGGGTGTG+AGG | 0.631646 | 7_4:-57504252 | None:intergenic |
| AATGGCTGGAGAGCTTTGAG+GGG | 0.632993 | 7_4:-57507556 | None:intergenic |
| TAAATTCTTGTCGGTCTCGG+AGG | 0.636459 | 7_4:-57504564 | None:intergenic |
| AAAGAGTATGGACTCATAGA+CGG | 0.645145 | 7_4:+57507520 | Msa1165560:CDS |
| TAATGGGAAAAGAACAGTAG+AGG | 0.648304 | 7_4:-57504196 | None:intergenic |
| TATTTCCCTGTACATGCACA+AGG | 0.650585 | 7_4:+57504982 | Msa1165560:CDS |
| ACTTAGAGAATAGTACGTTG+TGG | 0.655340 | 7_4:+57505158 | Msa1165560:intron |
| GAAATTGTGCCCGAAAGTTG+AGG | 0.657853 | 7_4:+57507702 | Msa1165560:three_prime_UTR |
| CCTCCTTGAAACCCACCAAG+CGG | 0.659972 | 7_4:-57506357 | None:intergenic |
| AAGTTTAGAGAAGATCAACC+AGG | 0.666672 | 7_4:+57507459 | Msa1165560:CDS |
| TGCTAATCCAACACAAACAG+TGG | 0.674559 | 7_4:-57505718 | None:intergenic |
| TTTCACATGGATATCAACAT+GGG | 0.682231 | 7_4:-57507683 | None:intergenic |
| TAGAGAATAGTACGTTGTGG+AGG | 0.688408 | 7_4:+57505161 | Msa1165560:intron |
| ATGTATGTAAATTCTCCAGG+AGG | 0.712038 | 7_4:+57505507 | Msa1165560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATAAAACAAATGTA+AGG | - | chr7_4:57505572-57505591 | None:intergenic | 10.0% |
| !!! | TTTTATTTTATTCAATCTAT+GGG | + | chr7_4:57505580-57505599 | Msa1165560:intron | 10.0% |
| !!! | AATTTCATATTCTATATTTT+TGG | - | chr7_4:57506734-57506753 | None:intergenic | 10.0% |
| !! | TAATAAAAGAAAAAATTGAA+AGG | - | chr7_4:57506766-57506785 | None:intergenic | 10.0% |
| !!! | TGTTTATGTTAATGATTTTT+TGG | + | chr7_4:57504541-57504560 | Msa1165560:CDS | 15.0% |
| !! | GTATATGTTTATGTAAAAAT+GGG | - | chr7_4:57504799-57504818 | None:intergenic | 15.0% |
| !! | TGTATATGTTTATGTAAAAA+TGG | - | chr7_4:57504800-57504819 | None:intergenic | 15.0% |
| !!! | GTTTTATTTTATTCAATCTA+TGG | + | chr7_4:57505579-57505598 | Msa1165560:intron | 15.0% |
| !! | ATATATACACAATATTAGTA+TGG | - | chr7_4:57506084-57506103 | None:intergenic | 15.0% |
| !! | ATAAAAAGAAACAACAAAAT+GGG | - | chr7_4:57506421-57506440 | None:intergenic | 15.0% |
| !! | AATAAAAAGAAACAACAAAA+TGG | - | chr7_4:57506422-57506441 | None:intergenic | 15.0% |
| !! | AAAAATCATGAAAATTTGAA+CGG | - | chr7_4:57507756-57507775 | None:intergenic | 15.0% |
| !! | ATCACAAAATTGTGTAATAA+CGG | - | chr7_4:57504321-57504340 | None:intergenic | 20.0% |
| !!! | TGTATTCTTGTTTTTTCTAT+TGG | + | chr7_4:57504393-57504412 | Msa1165560:intron | 20.0% |
| !!! | GTATTCTTGTTTTTTCTATT+GGG | + | chr7_4:57504394-57504413 | Msa1165560:intron | 20.0% |
| !!! | TTCTCTTGTTAATTTGTTAT+AGG | + | chr7_4:57504620-57504639 | Msa1165560:intron | 20.0% |
| !!! | TCTTGATAGCATTATTATTA+TGG | + | chr7_4:57505987-57506006 | Msa1165560:intron | 20.0% |
| !!! | TTTTTCATTTCCCTAAAATT+TGG | + | chr7_4:57506216-57506235 | Msa1165560:intron | 20.0% |
| !!! | TTTTCATTTCCCTAAAATTT+GGG | + | chr7_4:57506217-57506236 | Msa1165560:intron | 20.0% |
| !!! | AAAGTTTTTTTCTTTTATCG+AGG | - | chr7_4:57506262-57506281 | None:intergenic | 20.0% |
| !! | TTGAAATTGAACAAGTATTA+TGG | + | chr7_4:57506486-57506505 | Msa1165560:intron | 20.0% |
| !! | TGAAATTGAACAAGTATTAT+GGG | + | chr7_4:57506487-57506506 | Msa1165560:intron | 20.0% |
| !! | ATAAAGTAAATTACGAAGTT+GGG | + | chr7_4:57506840-57506859 | Msa1165560:intron | 20.0% |
| !!! | AAACTGATTTAATACTAGAT+TGG | - | chr7_4:57507040-57507059 | None:intergenic | 20.0% |
| !! | AAAATCATGAAAATTTGAAC+GGG | - | chr7_4:57507755-57507774 | None:intergenic | 20.0% |
| !! | AATAATCCAATTTCACTATA+TGG | - | chr7_4:57507803-57507822 | None:intergenic | 20.0% |
| ! | AAAGCAAATCGAATGAATAA+TGG | + | chr7_4:57504149-57504168 | Msa1165560:exon | 25.0% |
| ! | AGAAAAGAAAATAGTTTACC+AGG | - | chr7_4:57504295-57504314 | None:intergenic | 25.0% |
| !! | TACTCAAAAATCTGATTTGA+AGG | + | chr7_4:57504511-57504530 | Msa1165560:CDS | 25.0% |
| ! | AGAATTTAAGTCATGGAATT+TGG | + | chr7_4:57504579-57504598 | Msa1165560:CDS | 25.0% |
| !!! | AATTTGTTATAGGTTCCAAA+AGG | + | chr7_4:57504630-57504649 | Msa1165560:intron | 25.0% |
| !! | ATAATCAATTCTACACCTTT+TGG | - | chr7_4:57504648-57504667 | None:intergenic | 25.0% |
| ! | AGAATTGATTATGACATGTT+TGG | + | chr7_4:57504656-57504675 | Msa1165560:intron | 25.0% |
| !!! | TTTACATTCAACTCACTTTT+AGG | + | chr7_4:57504832-57504851 | Msa1165560:intron | 25.0% |
| !! | CTTAGGGAATAATATGTTTT+TGG | + | chr7_4:57505079-57505098 | Msa1165560:intron | 25.0% |
| !! | GATCACTAATAATATGCTTT+TGG | + | chr7_4:57505101-57505120 | Msa1165560:intron | 25.0% |
| ! | ATTCATATAAAGAAAACGAG+GGG | - | chr7_4:57505376-57505395 | None:intergenic | 25.0% |
| ! | CATTCATATAAAGAAAACGA+GGG | - | chr7_4:57505377-57505396 | None:intergenic | 25.0% |
| ! | ACATTCATATAAAGAAAACG+AGG | - | chr7_4:57505378-57505397 | None:intergenic | 25.0% |
| ! | AAATATTAAAGACAGACTCA+GGG | - | chr7_4:57505403-57505422 | None:intergenic | 25.0% |
| ! | AATTGAGCTTCATAAATACT+TGG | - | chr7_4:57505426-57505445 | None:intergenic | 25.0% |
| !! | AATTTTGTGATATCTTGATC+AGG | + | chr7_4:57505476-57505495 | Msa1165560:intron | 25.0% |
| !! | TATGGGTAGACTTTAAAAAA+AGG | + | chr7_4:57505597-57505616 | Msa1165560:intron | 25.0% |
| !!! | CTAAACTTATGTTTTTGCTA+GGG | + | chr7_4:57505652-57505671 | Msa1165560:intron | 25.0% |
| ! | TACACAATATTAGTATGGAA+TGG | - | chr7_4:57506079-57506098 | None:intergenic | 25.0% |
| ! | AAAACAGTATTGCAAGTTAA+GGG | - | chr7_4:57506170-57506189 | None:intergenic | 25.0% |
| ! | TTTCATTTCCCTAAAATTTG+GGG | + | chr7_4:57506218-57506237 | Msa1165560:intron | 25.0% |
| ! | TCAATTTCAACTATCTAGAT+GGG | - | chr7_4:57506476-57506495 | None:intergenic | 25.0% |
| ! | TTCAATTTCAACTATCTAGA+TGG | - | chr7_4:57506477-57506496 | None:intergenic | 25.0% |
| ! | AATTTAAATCTGTCTGATTG+AGG | + | chr7_4:57506516-57506535 | Msa1165560:intron | 25.0% |
| !!! | TCATATGAAGTTTTATCCTT+TGG | + | chr7_4:57506659-57506678 | Msa1165560:intron | 25.0% |
| ! | AGAATTGATATTTGAACCAA+AGG | - | chr7_4:57506678-57506697 | None:intergenic | 25.0% |
| ! | CATAAAGTAAATTACGAAGT+TGG | + | chr7_4:57506839-57506858 | Msa1165560:intron | 25.0% |
| ! | TAAAGTAAATTACGAAGTTG+GGG | + | chr7_4:57506841-57506860 | Msa1165560:intron | 25.0% |
| ! | TCTAGTATTAAATCAGTTTC+TGG | + | chr7_4:57507041-57507060 | Msa1165560:intron | 25.0% |
| ! | GAATACAAAATCAGTAAAAG+AGG | + | chr7_4:57507073-57507092 | Msa1165560:intron | 25.0% |
| ! | AACAATACAATGATAAGGAA+TGG | - | chr7_4:57507121-57507140 | None:intergenic | 25.0% |
| ! | TTCCTTATCATTGTATTGTT+AGG | + | chr7_4:57507121-57507140 | Msa1165560:intron | 25.0% |
| ! | AACCTAACAATACAATGATA+AGG | - | chr7_4:57507126-57507145 | None:intergenic | 25.0% |
| ! | ACAAATAGTAATATCACCTA+TGG | + | chr7_4:57507274-57507293 | Msa1165560:intron | 25.0% |
| ! | AATTATTAGTCATAATCCTC+AGG | + | chr7_4:57507375-57507394 | Msa1165560:intron | 25.0% |
| !!! | TTCATTTTTACCTCAACTTT+CGG | - | chr7_4:57507715-57507734 | None:intergenic | 25.0% |
| !!! | TTTTGACTTCATTACTTGAT+TGG | + | chr7_4:57507848-57507867 | Msa1165560:three_prime_UTR | 25.0% |
| AAGAGAAAGAAGAAGAAGTA+GGG | - | chr7_4:57504224-57504243 | None:intergenic | 30.0% | |
| ! | GTTATGACTTTTCTATCAAG+TGG | + | chr7_4:57504440-57504459 | Msa1165560:intron | 30.0% |
| ATTTCCTGCAAATCAAAGTA+GGG | - | chr7_4:57504472-57504491 | None:intergenic | 30.0% | |
| AATTTCCTGCAAATCAAAGT+AGG | - | chr7_4:57504473-57504492 | None:intergenic | 30.0% | |
| !! | TACTTTGATTTGCAGGAAAT+TGG | + | chr7_4:57504472-57504491 | Msa1165560:intron | 30.0% |
| !! | ACTTTGATTTGCAGGAAATT+GGG | + | chr7_4:57504473-57504492 | Msa1165560:intron | 30.0% |
| TCCATGACTTAAATTCTTGT+CGG | - | chr7_4:57504576-57504595 | None:intergenic | 30.0% | |
| CAAGTAGTATCAATTTAGGA+GGG | - | chr7_4:57504703-57504722 | None:intergenic | 30.0% | |
| TCAAGTAGTATCAATTTAGG+AGG | - | chr7_4:57504704-57504723 | None:intergenic | 30.0% | |
| GCTTCAAGTAGTATCAATTT+AGG | - | chr7_4:57504707-57504726 | None:intergenic | 30.0% | |
| CAATATGTAGGTCTTTCTTA+GGG | + | chr7_4:57505063-57505082 | Msa1165560:intron | 30.0% | |
| ! | TCTTTTTGTTAAAAAGCCCA+TGG | + | chr7_4:57505269-57505288 | Msa1165560:intron | 30.0% |
| GGCATATAAAGATAAACCAT+GGG | - | chr7_4:57505288-57505307 | None:intergenic | 30.0% | |
| AGGCATATAAAGATAAACCA+TGG | - | chr7_4:57505289-57505308 | None:intergenic | 30.0% | |
| TGGTTTATCTTTATATGCCT+TGG | + | chr7_4:57505289-57505308 | Msa1165560:intron | 30.0% | |
| GAAATATTAAAGACAGACTC+AGG | - | chr7_4:57505404-57505423 | None:intergenic | 30.0% | |
| !! | GCTAAACTTATGTTTTTGCT+AGG | + | chr7_4:57505651-57505670 | Msa1165560:intron | 30.0% |
| ATTACATCACACATATCATC+GGG | - | chr7_4:57505948-57505967 | None:intergenic | 30.0% | |
| CATTACATCACACATATCAT+CGG | - | chr7_4:57505949-57505968 | None:intergenic | 30.0% | |
| TGTAATGGTTTCTGCAATAT+AGG | + | chr7_4:57505962-57505981 | Msa1165560:intron | 30.0% | |
| CAAAACAGTATTGCAAGTTA+AGG | - | chr7_4:57506171-57506190 | None:intergenic | 30.0% | |
| !!! | CTTAACTTGCAATACTGTTT+TGG | + | chr7_4:57506169-57506188 | Msa1165560:intron | 30.0% |
| ! | ATGACAAACCCCAAATTTTA+GGG | - | chr7_4:57506229-57506248 | None:intergenic | 30.0% |
| ! | TATGACAAACCCCAAATTTT+AGG | - | chr7_4:57506230-57506249 | None:intergenic | 30.0% |
| TGAATCATTATCCTCGAATT+TGG | - | chr7_4:57506333-57506352 | None:intergenic | 30.0% | |
| CATTGTGCTTATGTTATCAA+TGG | + | chr7_4:57506565-57506584 | Msa1165560:intron | 30.0% | |
| ATGTTATCAATGGACCAAAT+TGG | + | chr7_4:57506575-57506594 | Msa1165560:intron | 30.0% | |
| GGTTCAAATATCAATTCTTG+AGG | + | chr7_4:57506680-57506699 | Msa1165560:intron | 30.0% | |
| AAATATCAATTCTTGAGGTG+TGG | + | chr7_4:57506685-57506704 | Msa1165560:intron | 30.0% | |
| !!! | TGGTTTTAGAATAAATGCCA+AGG | + | chr7_4:57506705-57506724 | Msa1165560:intron | 30.0% |
| !!! | GGTTTTAGAATAAATGCCAA+GGG | + | chr7_4:57506706-57506725 | Msa1165560:intron | 30.0% |
| AAAGTAAATTACGAAGTTGG+GGG | + | chr7_4:57506842-57506861 | Msa1165560:intron | 30.0% | |
| ! | GAGATTTTCATGAGTTTAGT+AGG | - | chr7_4:57506977-57506996 | None:intergenic | 30.0% |
| !! | AAATCAGTTTCTGGTATACA+TGG | + | chr7_4:57507050-57507069 | Msa1165560:intron | 30.0% |
| !! | AATCAGTTTCTGGTATACAT+GGG | + | chr7_4:57507051-57507070 | Msa1165560:intron | 30.0% |
| TAAGGAATGGTACAGAAAAT+TGG | - | chr7_4:57507108-57507127 | None:intergenic | 30.0% | |
| ACAAATAGTAATGTCACCTA+TGG | + | chr7_4:57507204-57507223 | Msa1165560:intron | 30.0% | |
| TAAACTTTGACCAGTTTGAT+AGG | - | chr7_4:57507446-57507465 | None:intergenic | 30.0% | |
| TTGCACTCATGAAAAAATCA+CGG | - | chr7_4:57507492-57507511 | None:intergenic | 30.0% | |
| ATCATTCTTACTTAACCCTA+CGG | - | chr7_4:57507656-57507675 | None:intergenic | 30.0% | |
| TTTCACATGGATATCAACAT+GGG | - | chr7_4:57507686-57507705 | None:intergenic | 30.0% | |
| ATTTCACATGGATATCAACA+TGG | - | chr7_4:57507687-57507706 | None:intergenic | 30.0% | |
| !! | TCATTTTTACCTCAACTTTC+GGG | - | chr7_4:57507714-57507733 | None:intergenic | 30.0% |
| AGTCATCCATATAGTGAAAT+TGG | + | chr7_4:57507794-57507813 | Msa1165560:three_prime_UTR | 30.0% | |
| CTCATTAGATGAAATTAACG+TGG | + | chr7_4:57507932-57507951 | Msa1165560:three_prime_UTR | 30.0% | |
| TAATGGGAAAAGAACAGTAG+AGG | - | chr7_4:57504199-57504218 | None:intergenic | 35.0% | |
| AAGAAGAAGTAGGGGTTAAT+GGG | - | chr7_4:57504215-57504234 | None:intergenic | 35.0% | |
| AGAGAAAGAAGAAGAAGTAG+GGG | - | chr7_4:57504223-57504242 | None:intergenic | 35.0% | |
| GAAGAGAAAGAAGAAGAAGT+AGG | - | chr7_4:57504225-57504244 | None:intergenic | 35.0% | |
| AAATAGTTTACCAGGAGAAG+CGG | - | chr7_4:57504287-57504306 | None:intergenic | 35.0% | |
| TTTAGCAATTGAGCATACAC+TGG | + | chr7_4:57504418-57504437 | Msa1165560:intron | 35.0% | |
| !! | TAAACCCTACTTTGATTTGC+AGG | + | chr7_4:57504465-57504484 | Msa1165560:intron | 35.0% |
| ! | AAAATCTGATTTGAAGGCGA+AGG | + | chr7_4:57504517-57504536 | Msa1165560:CDS | 35.0% |
| ACTTAAATTCTTGTCGGTCT+CGG | - | chr7_4:57504570-57504589 | None:intergenic | 35.0% | |
| ACCGACAAGAATTTAAGTCA+TGG | + | chr7_4:57504572-57504591 | Msa1165560:CDS | 35.0% | |
| AGAGAAATGAAAACACCTGA+TGG | - | chr7_4:57504606-57504625 | None:intergenic | 35.0% | |
| TTGCCTTTGAATGTCTTTGA+AGG | + | chr7_4:57504932-57504951 | Msa1165560:intron | 35.0% | |
| TGCCTTTGAATGTCTTTGAA+GGG | + | chr7_4:57504933-57504952 | Msa1165560:intron | 35.0% | |
| TTCCCTTCAAAGACATTCAA+AGG | - | chr7_4:57504938-57504957 | None:intergenic | 35.0% | |
| AAAGCTGACTAATAACACTC+TGG | - | chr7_4:57505041-57505060 | None:intergenic | 35.0% | |
| ! | AGTCAGCTTTTCCAATATGT+AGG | + | chr7_4:57505051-57505070 | Msa1165560:intron | 35.0% |
| CCTAAGAAAGACCTACATAT+TGG | - | chr7_4:57505065-57505084 | None:intergenic | 35.0% | |
| CCAATATGTAGGTCTTTCTT+AGG | + | chr7_4:57505062-57505081 | Msa1165560:intron | 35.0% | |
| ACTTAGAGAATAGTACGTTG+TGG | + | chr7_4:57505158-57505177 | Msa1165560:intron | 35.0% | |
| AAGCTGAGAAACTATGATGT+TGG | - | chr7_4:57505207-57505226 | None:intergenic | 35.0% | |
| CTTCAAGAAATGCAAACGTA+TGG | - | chr7_4:57505326-57505345 | None:intergenic | 35.0% | |
| GTCATGTATGTAAATTCTCC+AGG | + | chr7_4:57505504-57505523 | Msa1165560:CDS | 35.0% | |
| ATGTATGTAAATTCTCCAGG+AGG | + | chr7_4:57505507-57505526 | Msa1165560:CDS | 35.0% | |
| !! | ACTTATGTTTTTGCTAGGGA+TGG | + | chr7_4:57505656-57505675 | Msa1165560:intron | 35.0% |
| TGGCGATATTTGATACTATG+AGG | + | chr7_4:57505676-57505695 | Msa1165560:CDS | 35.0% | |
| ATGGTAAAGGGTGAGAATTA+AGG | - | chr7_4:57505766-57505785 | None:intergenic | 35.0% | |
| ! | GTTTTTGTATCAGCAGAACT+TGG | + | chr7_4:57505819-57505838 | Msa1165560:intron | 35.0% |
| CGATGATATGTGTGATGTAA+TGG | + | chr7_4:57505947-57505966 | Msa1165560:intron | 35.0% | |
| TGTTGCATGCTTGATACTAT+TGG | + | chr7_4:57506031-57506050 | Msa1165560:intron | 35.0% | |
| GTTAAGGGAATCATTACCTT+TGG | - | chr7_4:57506155-57506174 | None:intergenic | 35.0% | |
| ! | GTCCTCGGTTTTTATGTTTT+AGG | + | chr7_4:57506191-57506210 | Msa1165560:intron | 35.0% |
| CTCCTAAAACATAAAAACCG+AGG | - | chr7_4:57506196-57506215 | None:intergenic | 35.0% | |
| ATAATGATTCATCAACCGCT+TGG | + | chr7_4:57506342-57506361 | Msa1165560:CDS | 35.0% | |
| GCAAACTGACATAGATATTC+AGG | + | chr7_4:57506380-57506399 | Msa1165560:CDS | 35.0% | |
| AACAACAAAATGGGAAGATG+AGG | - | chr7_4:57506412-57506431 | None:intergenic | 35.0% | |
| TTGAGGTTCATGAAAATCCA+TGG | + | chr7_4:57506533-57506552 | Msa1165560:intron | 35.0% | |
| CAACAGAATAAGCCATTTCT+CGG | - | chr7_4:57506629-57506648 | None:intergenic | 35.0% | |
| AGAAATGGCTTATTCTGTTG+TGG | + | chr7_4:57506629-57506648 | Msa1165560:intron | 35.0% | |
| !!! | TTCTATATTTTTGGCTCCCT+TGG | - | chr7_4:57506725-57506744 | None:intergenic | 35.0% |
| GGTACAGAAAATTGGACTTT+AGG | - | chr7_4:57507100-57507119 | None:intergenic | 35.0% | |
| AGATGTCGAAGAAAACAAAG+CGG | - | chr7_4:57507176-57507195 | None:intergenic | 35.0% | |
| TTCATCAAAGGAGGACATAA+TGG | + | chr7_4:57507228-57507247 | Msa1165560:intron | 35.0% | |
| TTCATCAAAGGAGGACATAA+TGG | + | chr7_4:57507228-57507247 | Msa1165560:intron | 35.0% | |
| AAATGAAATGCTGCACCATA+AGG | + | chr7_4:57507399-57507418 | Msa1165560:CDS | 35.0% | |
| ACCATAAGGCTAACTTGAAT+GGG | + | chr7_4:57507413-57507432 | Msa1165560:CDS | 35.0% | |
| AAGTTTAGAGAAGATCAACC+AGG | + | chr7_4:57507459-57507478 | Msa1165560:CDS | 35.0% | |
| ACTCATGAAAAAATCACGGT+CGG | - | chr7_4:57507488-57507507 | None:intergenic | 35.0% | |
| ! | AAAGAGTATGGACTCATAGA+CGG | + | chr7_4:57507520-57507539 | Msa1165560:CDS | 35.0% |
| TGCAGCCAAAGTTAATGATA+GGG | + | chr7_4:57507585-57507604 | Msa1165560:CDS | 35.0% | |
| !! | TTCATTTTGAGTGAACCGTA+GGG | + | chr7_4:57507638-57507657 | Msa1165560:three_prime_UTR | 35.0% |
| GTTGAGGTAAAAATGAACAC+AGG | + | chr7_4:57507718-57507737 | Msa1165560:three_prime_UTR | 35.0% | |
| AGTAGAGGCAAATCGAATAG+AGG | - | chr7_4:57504184-57504203 | None:intergenic | 40.0% | |
| GAAGAAGAAGTAGGGGTTAA+TGG | - | chr7_4:57504216-57504235 | None:intergenic | 40.0% | |
| ! | AAGCAAAAGAAAGGGTGTGA+GGG | - | chr7_4:57504254-57504273 | None:intergenic | 40.0% |
| AGAGGGTGAAGCAAAAGAAA+GGG | - | chr7_4:57504262-57504281 | None:intergenic | 40.0% | |
| AAGAGGGTGAAGCAAAAGAA+AGG | - | chr7_4:57504263-57504282 | None:intergenic | 40.0% | |
| AATAGTTTACCAGGAGAAGC+GGG | - | chr7_4:57504286-57504305 | None:intergenic | 40.0% | |
| !! | TTGATTTGCAGGAAATTGGG+AGG | + | chr7_4:57504476-57504495 | Msa1165560:intron | 40.0% |
| ACAGGGAAATAAGGAGAAGA+CGG | - | chr7_4:57504973-57504992 | None:intergenic | 40.0% | |
| TGTGCATGTACAGGGAAATA+AGG | - | chr7_4:57504982-57505001 | None:intergenic | 40.0% | |
| TATTTCCCTGTACATGCACA+AGG | + | chr7_4:57504982-57505001 | Msa1165560:CDS | 40.0% | |
| TAGAGAATAGTACGTTGTGG+AGG | + | chr7_4:57505161-57505180 | Msa1165560:intron | 40.0% | |
| TTGGCCATATCATCATCAAC+CGG | - | chr7_4:57505188-57505207 | None:intergenic | 40.0% | |
| GATGAAGAACATACCTTGCT+AGG | - | chr7_4:57505251-57505270 | None:intergenic | 40.0% | |
| !! | TGCAAACGTATGGTTTTGCA+TGG | - | chr7_4:57505316-57505335 | None:intergenic | 40.0% |
| TGCTAATCCAACACAAACAG+TGG | - | chr7_4:57505721-57505740 | None:intergenic | 40.0% | |
| !! | TTTGTGTTGGATTAGCAGCA+AGG | + | chr7_4:57505724-57505743 | Msa1165560:CDS | 40.0% |
| ! | CAGCTTTTGCAGATGGTAAA+GGG | - | chr7_4:57505778-57505797 | None:intergenic | 40.0% |
| ! | ACAGCTTTTGCAGATGGTAA+AGG | - | chr7_4:57505779-57505798 | None:intergenic | 40.0% |
| ! | CAAATGACAGCTTTTGCAGA+TGG | - | chr7_4:57505785-57505804 | None:intergenic | 40.0% |
| ACCAAGTTCTGTTGAATGCT+AGG | + | chr7_4:57505850-57505869 | Msa1165560:intron | 40.0% | |
| TCCTAGCATTCAACAGAACT+TGG | - | chr7_4:57505854-57505873 | None:intergenic | 40.0% | |
| GAACATCACACCCACAATTA+CGG | - | chr7_4:57505924-57505943 | None:intergenic | 40.0% | |
| ! | TGACATTTTCGCAATCAGCA+TGG | + | chr7_4:57506105-57506124 | Msa1165560:intron | 40.0% |
| ! | GACATTTTCGCAATCAGCAT+GGG | + | chr7_4:57506106-57506125 | Msa1165560:intron | 40.0% |
| !!! | TGCAATACTGTTTTGGTCCT+CGG | + | chr7_4:57506176-57506195 | Msa1165560:intron | 40.0% |
| TATCTCTTCCTCACTTCTGA+AGG | + | chr7_4:57506291-57506310 | Msa1165560:intron | 40.0% | |
| ATCTCTTTCCTTCAGAAGTG+AGG | - | chr7_4:57506302-57506321 | None:intergenic | 40.0% | |
| !! | CAATGGACCAAATTGGTCTT+CGG | + | chr7_4:57506582-57506601 | Msa1165560:intron | 40.0% |
| CTTTACACCGAAGACCAATT+TGG | - | chr7_4:57506592-57506611 | None:intergenic | 40.0% | |
| !! | ATTGGTCTTCGGTGTAAAGA+AGG | + | chr7_4:57506593-57506612 | Msa1165560:intron | 40.0% |
| GGAAAATCCTTACCGAGAAA+TGG | + | chr7_4:57506614-57506633 | Msa1165560:intron | 40.0% | |
| GAATAAGCCATTTCTCGGTA+AGG | - | chr7_4:57506624-57506643 | None:intergenic | 40.0% | |
| TGCTAGTTACATCTTGCTCT+TGG | + | chr7_4:57506918-57506937 | Msa1165560:intron | 40.0% | |
| ATCACCTATGGCTTCATCAA+AGG | + | chr7_4:57507286-57507305 | Msa1165560:intron | 40.0% | |
| CACCATAAGGCTAACTTGAA+TGG | + | chr7_4:57507412-57507431 | Msa1165560:CDS | 40.0% | |
| !! | ACCCATTCAAGTTAGCCTTA+TGG | - | chr7_4:57507417-57507436 | None:intergenic | 40.0% |
| GCAAAAGAAGCCAAAGAGTA+TGG | + | chr7_4:57507508-57507527 | Msa1165560:CDS | 40.0% | |
| GTCTATGAGTCCATACTCTT+TGG | - | chr7_4:57507521-57507540 | None:intergenic | 40.0% | |
| CTGCAGCCAAAGTTAATGAT+AGG | + | chr7_4:57507584-57507603 | Msa1165560:CDS | 40.0% | |
| GCTAGCCCTATCATTAACTT+TGG | - | chr7_4:57507593-57507612 | None:intergenic | 40.0% | |
| !! | CTTCATTTTGAGTGAACCGT+AGG | + | chr7_4:57507637-57507656 | Msa1165560:three_prime_UTR | 40.0% |
| ! | TCCTTCACCAGTAGCATTTT+GGG | - | chr7_4:57507880-57507899 | None:intergenic | 40.0% |
| ! | GAAGCAAAAGAAAGGGTGTG+AGG | - | chr7_4:57504255-57504274 | None:intergenic | 45.0% |
| TAAATTCTTGTCGGTCTCGG+AGG | - | chr7_4:57504567-57504586 | None:intergenic | 45.0% | |
| GTCATGGAATTTGGTCCATC+AGG | + | chr7_4:57504588-57504607 | Msa1165560:CDS | 45.0% | |
| CAGGGAAATAAGGAGAAGAC+GGG | - | chr7_4:57504972-57504991 | None:intergenic | 45.0% | |
| CTTGTCCTTGTGCATGTACA+GGG | - | chr7_4:57504990-57505009 | None:intergenic | 45.0% | |
| AATAGTACGTTGTGGAGGAC+CGG | + | chr7_4:57505166-57505185 | Msa1165560:CDS | 45.0% | |
| !! | AGGACCGGTTGATGATGATA+TGG | + | chr7_4:57505181-57505200 | Msa1165560:CDS | 45.0% |
| ACATACCTTGCTAGGATCCA+CGG | - | chr7_4:57505243-57505262 | None:intergenic | 45.0% | |
| !! | GTATGGTTTTGCATGGACCA+AGG | - | chr7_4:57505309-57505328 | None:intergenic | 45.0% |
| ACACAAACAGTGGACACATC+AGG | - | chr7_4:57505711-57505730 | None:intergenic | 45.0% | |
| GATGTGTCCACTGTTTGTGT+TGG | + | chr7_4:57505711-57505730 | Msa1165560:CDS | 45.0% | |
| CAATTACGGTGAGGAAGGAA+GGG | - | chr7_4:57505910-57505929 | None:intergenic | 45.0% | |
| ACAATTACGGTGAGGAAGGA+AGG | - | chr7_4:57505911-57505930 | None:intergenic | 45.0% | |
| TTCCTTCCTCACCGTAATTG+TGG | + | chr7_4:57505910-57505929 | Msa1165560:intron | 45.0% | |
| TCCTTCCTCACCGTAATTGT+GGG | + | chr7_4:57505911-57505930 | Msa1165560:intron | 45.0% | |
| GATACAGCTTGCCAAATTCG+AGG | + | chr7_4:57506319-57506338 | Msa1165560:CDS | 45.0% | |
| ATGATTCATCAACCGCTTGG+TGG | + | chr7_4:57506345-57506364 | Msa1165560:CDS | 45.0% | |
| TGATTCATCAACCGCTTGGT+GGG | + | chr7_4:57506346-57506365 | Msa1165560:CDS | 45.0% | |
| GCACAATGCACATCTATCCA+TGG | - | chr7_4:57506553-57506572 | None:intergenic | 45.0% | |
| TACGAAGTTGGGGGATTTCA+TGG | + | chr7_4:57506851-57506870 | Msa1165560:intron | 45.0% | |
| CTTAACCCGTTACTCAACAC+AGG | - | chr7_4:57506897-57506916 | None:intergenic | 45.0% | |
| !! | CTGTGTTGAGTAACGGGTTA+AGG | + | chr7_4:57506895-57506914 | Msa1165560:intron | 45.0% |
| GTCGAAGAAAACAAAGCGGA+AGG | - | chr7_4:57507172-57507191 | None:intergenic | 45.0% | |
| GTCACCTATGGCTTCATCAA+AGG | + | chr7_4:57507216-57507235 | Msa1165560:intron | 45.0% | |
| ACCTATGGCTTCATCAAAGG+AGG | + | chr7_4:57507219-57507238 | Msa1165560:intron | 45.0% | |
| TCCTCCTTTGATGAAGCCAT+AGG | - | chr7_4:57507223-57507242 | None:intergenic | 45.0% | |
| ACCTATGGCTTCATCAAAGG+AGG | + | chr7_4:57507219-57507238 | Msa1165560:intron | 45.0% | |
| TCCTCCTTTGATGAAGCCAT+AGG | - | chr7_4:57507223-57507242 | None:intergenic | 45.0% | |
| TGCAGCATTTCATTTGCCTG+AGG | - | chr7_4:57507394-57507413 | None:intergenic | 45.0% | |
| GGGTATCTGTCCTATCAAAC+TGG | + | chr7_4:57507433-57507452 | Msa1165560:CDS | 45.0% | |
| AAAAATCACGGTCGGTATCC+TGG | - | chr7_4:57507480-57507499 | None:intergenic | 45.0% | |
| ! | TAATGGCTGGAGAGCTTTGA+GGG | - | chr7_4:57507560-57507579 | None:intergenic | 45.0% |
| ACTTTGGCTGCAGATGCTAA+TGG | - | chr7_4:57507577-57507596 | None:intergenic | 45.0% | |
| CTTTCGGGCACAATTTCACA+TGG | - | chr7_4:57507699-57507718 | None:intergenic | 45.0% | |
| GAAATTGTGCCCGAAAGTTG+AGG | + | chr7_4:57507702-57507721 | Msa1165560:three_prime_UTR | 45.0% | |
| GTACTGTCCCAAAATGCTAC+TGG | + | chr7_4:57507870-57507889 | Msa1165560:three_prime_UTR | 45.0% | |
| TCCCAAAATGCTACTGGTGA+AGG | + | chr7_4:57507876-57507895 | Msa1165560:three_prime_UTR | 45.0% | |
| ! | CTCCTTCACCAGTAGCATTT+TGG | - | chr7_4:57507881-57507900 | None:intergenic | 45.0% |
| !!! | TTTTTTATATACATATTTTT+TGG | + | chr7_4:57507823-57507842 | Msa1165560:three_prime_UTR | 5.0% |
| CCTTGTCCTTGTGCATGTAC+AGG | - | chr7_4:57504991-57505010 | None:intergenic | 50.0% | |
| CCTGTACATGCACAAGGACA+AGG | + | chr7_4:57504988-57505007 | Msa1165560:CDS | 50.0% | |
| GCTTCTTTACCTTGATGCCG+TGG | + | chr7_4:57505223-57505242 | Msa1165560:CDS | 50.0% | |
| ACCCACAATTACGGTGAGGA+AGG | - | chr7_4:57505915-57505934 | None:intergenic | 50.0% | |
| TCACACCCACAATTACGGTG+AGG | - | chr7_4:57505919-57505938 | None:intergenic | 50.0% | |
| ! | GTGCTTTTCTGCTAAGCGCT+GGG | + | chr7_4:57506128-57506147 | Msa1165560:CDS | 50.0% |
| ACCCCACCTGTGTTGAGTAA+CGG | + | chr7_4:57506888-57506907 | Msa1165560:intron | 50.0% | |
| ACCCGTTACTCAACACAGGT+GGG | - | chr7_4:57506893-57506912 | None:intergenic | 50.0% | |
| AACCCGTTACTCAACACAGG+TGG | - | chr7_4:57506894-57506913 | None:intergenic | 50.0% | |
| !! | AATGGCTGGAGAGCTTTGAG+GGG | - | chr7_4:57507559-57507578 | None:intergenic | 50.0% |
| CTAATGGCTGGAGAGCTTTG+AGG | - | chr7_4:57507561-57507580 | None:intergenic | 50.0% | |
| TACCAGGAGAAGCGGGAAGA+GGG | - | chr7_4:57504279-57504298 | None:intergenic | 55.0% | |
| TTACCAGGAGAAGCGGGAAG+AGG | - | chr7_4:57504280-57504299 | None:intergenic | 55.0% | |
| AGGACAAGGACCACCACCAA+TGG | + | chr7_4:57505002-57505021 | Msa1165560:CDS | 55.0% | |
| AAACGCTCCTGCACCATTGG+TGG | - | chr7_4:57505018-57505037 | None:intergenic | 55.0% | |
| TGGAAACGCTCCTGCACCAT+TGG | - | chr7_4:57505021-57505040 | None:intergenic | 55.0% | |
| TGCTAGGATCCACGGCATCA+AGG | - | chr7_4:57505235-57505254 | None:intergenic | 55.0% | |
| TGATGCCGTGGATCCTAGCA+AGG | + | chr7_4:57505235-57505254 | Msa1165560:CDS | 55.0% | |
| CCAGCTGTAACTGATCCTCC+TGG | - | chr7_4:57505525-57505544 | None:intergenic | 55.0% | |
| CCAGGAGGATCAGTTACAGC+TGG | + | chr7_4:57505522-57505541 | Msa1165560:CDS | 55.0% | |
| ! | GGTGCTTTTCTGCTAAGCGC+TGG | + | chr7_4:57506127-57506146 | Msa1165560:CDS | 55.0% |
| !! | CAACCGCTTGGTGGGTTTCA+AGG | + | chr7_4:57506354-57506373 | Msa1165560:CDS | 55.0% |
| CCTCCTTGAAACCCACCAAG+CGG | - | chr7_4:57506360-57506379 | None:intergenic | 55.0% | |
| !! | CGCTTGGTGGGTTTCAAGGA+GGG | + | chr7_4:57506358-57506377 | Msa1165560:CDS | 55.0% |
| TCAACACAGGTGGGGTGAAG+GGG | - | chr7_4:57506884-57506903 | None:intergenic | 55.0% | |
| CTCAACACAGGTGGGGTGAA+GGG | - | chr7_4:57506885-57506904 | None:intergenic | 55.0% | |
| ACTCAACACAGGTGGGGTGA+AGG | - | chr7_4:57506886-57506905 | None:intergenic | 55.0% | |
| CCCGTTACTCAACACAGGTG+GGG | - | chr7_4:57506892-57506911 | None:intergenic | 55.0% | |
| CCCCACCTGTGTTGAGTAAC+GGG | + | chr7_4:57506889-57506908 | Msa1165560:intron | 55.0% | |
| TGGCTGCAGATGCTAATGGC+TGG | - | chr7_4:57507573-57507592 | None:intergenic | 55.0% | |
| AGGACCACCACCAATGGTGC+AGG | + | chr7_4:57505008-57505027 | Msa1165560:CDS | 60.0% | |
| !! | CTGCTAAGCGCTGGGACCAA+AGG | + | chr7_4:57506136-57506155 | Msa1165560:CDS | 60.0% |
| !! | CCGCTTGGTGGGTTTCAAGG+AGG | + | chr7_4:57506357-57506376 | Msa1165560:CDS | 60.0% |
| CACCCTCTTCCCGCTTCTCC+TGG | + | chr7_4:57504274-57504293 | Msa1165560:CDS | 65.0% | |
| CGCTCCTGCACCATTGGTGG+TGG | - | chr7_4:57505015-57505034 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 57504142 | 57507961 | 57504142 | ID=Msa1165560;Name=Msa1165560 |
| chr7_4 | mRNA | 57504142 | 57507961 | 57504142 | ID=Msa1165560-mRNA-1;Parent=Msa1165560;Name=Msa1165560-mRNA-1;_AED=0.06;_eAED=0.06;_QI=26|1|1|1|1|1|9|343|307 |
| chr7_4 | exon | 57504142 | 57504295 | 57504142 | ID=Msa1165560-mRNA-1:exon:17403;Parent=Msa1165560-mRNA-1 |
| chr7_4 | exon | 57504487 | 57504609 | 57504487 | ID=Msa1165560-mRNA-1:exon:17404;Parent=Msa1165560-mRNA-1 |
| chr7_4 | exon | 57504954 | 57505068 | 57504954 | ID=Msa1165560-mRNA-1:exon:17405;Parent=Msa1165560-mRNA-1 |
| chr7_4 | exon | 57505164 | 57505256 | 57505164 | ID=Msa1165560-mRNA-1:exon:17406;Parent=Msa1165560-mRNA-1 |
| chr7_4 | exon | 57505498 | 57505543 | 57505498 | ID=Msa1165560-mRNA-1:exon:17407;Parent=Msa1165560-mRNA-1 |
| chr7_4 | exon | 57505673 | 57505745 | 57505673 | ID=Msa1165560-mRNA-1:exon:17408;Parent=Msa1165560-mRNA-1 |
| chr7_4 | exon | 57506123 | 57506157 | 57506123 | ID=Msa1165560-mRNA-1:exon:17409;Parent=Msa1165560-mRNA-1 |
| chr7_4 | exon | 57506313 | 57506401 | 57506313 | ID=Msa1165560-mRNA-1:exon:17410;Parent=Msa1165560-mRNA-1 |
| chr7_4 | exon | 57507397 | 57507961 | 57507397 | ID=Msa1165560-mRNA-1:exon:17411;Parent=Msa1165560-mRNA-1 |
| chr7_4 | five_prime_UTR | 57504142 | 57504167 | 57504142 | ID=Msa1165560-mRNA-1:five_prime_utr;Parent=Msa1165560-mRNA-1 |
| chr7_4 | CDS | 57504168 | 57504295 | 57504168 | ID=Msa1165560-mRNA-1:cds;Parent=Msa1165560-mRNA-1 |
| chr7_4 | CDS | 57504487 | 57504609 | 57504487 | ID=Msa1165560-mRNA-1:cds;Parent=Msa1165560-mRNA-1 |
| chr7_4 | CDS | 57504954 | 57505068 | 57504954 | ID=Msa1165560-mRNA-1:cds;Parent=Msa1165560-mRNA-1 |
| chr7_4 | CDS | 57505164 | 57505256 | 57505164 | ID=Msa1165560-mRNA-1:cds;Parent=Msa1165560-mRNA-1 |
| chr7_4 | CDS | 57505498 | 57505543 | 57505498 | ID=Msa1165560-mRNA-1:cds;Parent=Msa1165560-mRNA-1 |
| chr7_4 | CDS | 57505673 | 57505745 | 57505673 | ID=Msa1165560-mRNA-1:cds;Parent=Msa1165560-mRNA-1 |
| chr7_4 | CDS | 57506123 | 57506157 | 57506123 | ID=Msa1165560-mRNA-1:cds;Parent=Msa1165560-mRNA-1 |
| chr7_4 | CDS | 57506313 | 57506401 | 57506313 | ID=Msa1165560-mRNA-1:cds;Parent=Msa1165560-mRNA-1 |
| chr7_4 | CDS | 57507397 | 57507618 | 57507397 | ID=Msa1165560-mRNA-1:cds;Parent=Msa1165560-mRNA-1 |
| chr7_4 | three_prime_UTR | 57507619 | 57507961 | 57507619 | ID=Msa1165560-mRNA-1:three_prime_utr;Parent=Msa1165560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
