AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1169260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1169260 MtrunA17_Chr7g0263821 95.299 234 8 2 1 234 1 231 4.10e-165 455
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1169260 AT2G37110.1 63.559 236 81 1 2 232 6 241 1.51e-108 312
Msa1169260 AT2G40935.8 27.354 223 115 8 18 230 1 186 8.37e-15 70.9
Msa1169260 AT2G40935.9 27.354 223 115 8 18 230 1 186 8.37e-15 70.9
Msa1169260 AT2G40935.1 27.354 223 115 8 18 230 1 186 8.37e-15 70.9
Msa1169260 AT2G40935.6 27.354 223 115 8 18 230 1 186 8.37e-15 70.9
Msa1169260 AT2G40935.5 27.354 223 115 8 18 230 1 186 8.37e-15 70.9

Find 97 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGCAAAATTTGTTATTA+AGG 0.152238 7_4:+62203795 Msa1169260:three_prime_UTR
CGACCCATGGTTTGCTCTCC+TGG 0.155725 7_4:-62203509 None:intergenic
CTCGGTTGTTTGTTCAGCTT+TGG 0.201151 7_4:-62199518 None:intergenic
AAAAGTGCATCTTGGTTCTT+TGG 0.239552 7_4:+62203654 Msa1169260:three_prime_UTR
CCGTCGCAGGTTCAATTTAG+AGG 0.280233 7_4:+62200751 Msa1169260:CDS
GCATCTTGGTTCTTTGGATT+TGG 0.285518 7_4:+62203660 Msa1169260:three_prime_UTR
GAGAGAGATATGAGAAATTT+CGG 0.297656 7_4:-62199342 None:intergenic
AATCACTGTTTGCATTATTC+TGG 0.315644 7_4:+62200650 Msa1169260:CDS
GAGGACTCGCCTCTTCTTCT+TGG 0.317431 7_4:-62199459 None:intergenic
CATTCTAATCCTGGGACATT+TGG 0.320185 7_4:+62200626 Msa1169260:CDS
GGATACGTGCTAGGTCTTCT+TGG 0.336415 7_4:+62200557 Msa1169260:intron
GAAGCAAAATTTGTTATTAA+GGG 0.358297 7_4:+62203796 Msa1169260:three_prime_UTR
AAGAAAATTCTTCCTCGTCT+TGG 0.373703 7_4:+62203541 Msa1169260:exon
TGGGTGCTGCGGAAGCTATT+TGG 0.374015 7_4:+62203331 Msa1169260:CDS
TCGGTTGTTTGTTCAGCTTT+GGG 0.376085 7_4:-62199517 None:intergenic
TCCTCCGTCTGCGCTTGTCT+TGG 0.401288 7_4:+62199634 Msa1169260:CDS
CTTCAATGCACAACCAGTAT+TGG 0.404863 7_4:+62203475 Msa1169260:CDS
GAAGTTGTGAGGCATTTAAT+AGG 0.405597 7_4:+62203303 Msa1169260:CDS
GACCCATGGTTTGCTCTCCT+GGG 0.411796 7_4:-62203508 None:intergenic
AGCCCATTCCTCGTTCTCCT+TGG 0.414902 7_4:+62199608 Msa1169260:CDS
GTGATTGGGAATTCATGCTT+TGG 0.424535 7_4:+62200680 Msa1169260:CDS
TATTCTGGACTGTATGTGAT+TGG 0.427733 7_4:+62200665 Msa1169260:CDS
GTGGCTCCTTGTGTGCTGTA+TGG 0.429471 7_4:+62200584 Msa1169260:CDS
GAGCAGCAGGATCATTATCT+TGG 0.435263 7_4:+62199538 Msa1169260:CDS
TCACCAACAAAATATAATAC+TGG 0.439834 7_4:-62199369 None:intergenic
ATTAAGGGCATGGTTCTGTA+TGG 0.441703 7_4:+62203811 Msa1169260:three_prime_UTR
GAGAGACTTCATTCTAATCC+TGG 0.446721 7_4:+62200617 Msa1169260:CDS
GTTTGTTCAGCTTTGGGAGG+TGG 0.450225 7_4:-62199511 None:intergenic
TTATATGTATTTGTTTATTG+TGG 0.454083 7_4:+62203743 Msa1169260:three_prime_UTR
TACATATAATACAGAACAGC+AGG 0.455475 7_4:-62203729 None:intergenic
TGCTGCAAAAGTGATCGTTT+TGG 0.456070 7_4:-62199657 None:intergenic
TGTGCTGTATGGAAGCAATA+TGG 0.456712 7_4:+62200595 Msa1169260:CDS
GATACGTGCTAGGTCTTCTT+GGG 0.460038 7_4:+62200558 Msa1169260:intron
CAAAATCAGGAGAGAGAAAA+GGG 0.461210 7_4:-62203628 None:intergenic
GGAGAGCAAACCATGGGTCG+TGG 0.465391 7_4:+62203512 Msa1169260:CDS
GCAAAATCAGGAGAGAGAAA+AGG 0.469880 7_4:-62203629 None:intergenic
AAAATTCTTCCTCGTCTTGG+AGG 0.474645 7_4:+62203544 Msa1169260:three_prime_UTR
AACTTGTTCTATAATAAAAC+AGG 0.477438 7_4:-62203923 None:intergenic
AAAATTTGTTATTAAGGGCA+TGG 0.482620 7_4:+62203801 Msa1169260:three_prime_UTR
TTCCAAGGAGAACGAGGAAT+GGG 0.488145 7_4:-62199610 None:intergenic
ATTATAGAACAAGTTGTCTC+CGG 0.488298 7_4:+62203931 Msa1169260:three_prime_UTR
GATGGGCTTCCGATTGGCCA+TGG 0.495225 7_4:+62199571 Msa1169260:CDS
ATTGGCCATGGAAGCGTCAT+GGG 0.501656 7_4:+62199583 Msa1169260:CDS
GTTGGAATTGTCTTGCACCC+TGG 0.503169 7_4:+62200702 Msa1169260:CDS
AATTCATCAATCATCATCAA+TGG 0.508789 7_4:+62199414 Msa1169260:exon
CGGAAGCTATTTGGAAAATG+AGG 0.509204 7_4:+62203340 Msa1169260:CDS
ACGGCTATGATATGAAAGCC+AGG 0.511774 7_4:-62200720 None:intergenic
GTCTGTGCTCTTTGTCAAGA+AGG 0.519013 7_4:+62203419 Msa1169260:CDS
TTGGGAATTCATGCTTTGGT+TGG 0.519796 7_4:+62200684 Msa1169260:CDS
TATCTTGGATGGACCGCCGA+TGG 0.521448 7_4:+62199553 Msa1169260:CDS
GATTGGCCATGGAAGCGTCA+TGG 0.522771 7_4:+62199582 Msa1169260:CDS
TGAACAAACAACCGAGCAGC+AGG 0.523235 7_4:+62199525 Msa1169260:CDS
ATCTTGGATGGACCGCCGAT+GGG 0.533392 7_4:+62199554 Msa1169260:CDS
ATTCTGGACTGTATGTGATT+GGG 0.533754 7_4:+62200666 Msa1169260:CDS
TTCAACGTCAAATCATATAG+AGG 0.534820 7_4:-62203593 None:intergenic
TGTTGTTGTTGTTTGAGAAG+AGG 0.535687 7_4:-62199478 None:intergenic
GAGAGCAAACCATGGGTCGT+GGG 0.539054 7_4:+62203513 Msa1169260:CDS
CAGTGATTGCCAAATGTCCC+AGG 0.539931 7_4:-62200635 None:intergenic
ATGACGCTTCCATGGCCAAT+CGG 0.541043 7_4:-62199580 None:intergenic
TCTTCAAGCCCCACGACCCA+TGG 0.541687 7_4:-62203522 None:intergenic
GCTGACCCATGACGCTTCCA+TGG 0.546172 7_4:-62199588 None:intergenic
ACCCATGGTTTGCTCTCCTG+GGG 0.548999 7_4:-62203507 None:intergenic
GCCGTACTGAAATCCGTCGC+AGG 0.563057 7_4:+62200738 Msa1169260:CDS
AGCAGGATCATTATCTTGGA+TGG 0.563776 7_4:+62199542 Msa1169260:CDS
TTGGCCAAGACAAGCGCAGA+CGG 0.569231 7_4:-62199638 None:intergenic
GTTCCAAGGAGAACGAGGAA+TGG 0.573660 7_4:-62199611 None:intergenic
GCAGCGTGAACATTATGAGT+TGG 0.577730 7_4:+62203364 Msa1169260:CDS
GCGCAGACGGAGGAGTTCCA+AGG 0.578089 7_4:-62199625 None:intergenic
ATGGCCAATCGGAAGCCCAT+CGG 0.579021 7_4:-62199569 None:intergenic
AGAGACTTCATTCTAATCCT+GGG 0.586170 7_4:+62200618 Msa1169260:CDS
ACTCAATCACCAAGAAGAAG+AGG 0.586743 7_4:+62199450 Msa1169260:CDS
AAGATAATGATCCTGCTGCT+CGG 0.588909 7_4:-62199536 None:intergenic
GCTAGGTCTTCTTGGGAGTG+TGG 0.589971 7_4:+62200565 Msa1169260:intron
ACCTGCGACGGATTTCAGTA+CGG 0.596489 7_4:-62200739 None:intergenic
ACTGGTTGTGCATTGAAGCC+AGG 0.597364 7_4:-62203470 None:intergenic
CTAGTCATAAAACAAGGGGC+CGG 0.607165 7_4:-62203950 None:intergenic
GTTGTTTGTTCAGCTTTGGG+AGG 0.607252 7_4:-62199514 None:intergenic
CCTCTAAATTGAACCTGCGA+CGG 0.608381 7_4:-62200751 None:intergenic
AGAGCAAACCATGGGTCGTG+GGG 0.610620 7_4:+62203514 Msa1169260:CDS
GCCAATCGGAAGCCCATCGG+CGG 0.617221 7_4:-62199566 None:intergenic
TGTGCATTGAAGCCAGGATG+AGG 0.621067 7_4:-62203464 None:intergenic
AATAGGTCATGTGGGTGCTG+CGG 0.621864 7_4:+62203320 Msa1169260:CDS
GAGGCATTTAATAGGTCATG+TGG 0.624379 7_4:+62203311 Msa1169260:CDS
AAAACTAGTCATAAAACAAG+GGG 0.630535 7_4:-62203954 None:intergenic
AGCCAGGATGAGGAACTCTA+CGG 0.631446 7_4:-62203454 None:intergenic
AGAGAAAAGGGAGCAAATGA+CGG 0.634642 7_4:-62203616 None:intergenic
ATTTCGGAGAAAATAGATGT+CGG 0.640965 7_4:-62199326 None:intergenic
CGGCTATGATATGAAAGCCA+GGG 0.643919 7_4:-62200719 None:intergenic
TTGCTTCCATACAGCACACA+AGG 0.646064 7_4:-62200590 None:intergenic
CCCATGGTTTGCTCTCCTGG+GGG 0.646326 7_4:-62203506 None:intergenic
TGAAAATCAGGGAAGTTGTG+AGG 0.661588 7_4:+62203292 Msa1169260:intron
GAGGAGTTCCAAGGAGAACG+AGG 0.662695 7_4:-62199616 None:intergenic
GCCAAGACAAGCGCAGACGG+AGG 0.664318 7_4:-62199635 None:intergenic
AGAATAGCACCTCCAAGACG+AGG 0.672156 7_4:-62203553 None:intergenic
AGGCATTTAATAGGTCATGT+GGG 0.681035 7_4:+62203312 Msa1169260:CDS
ACATATAATACAGAACAGCA+GGG 0.688049 7_4:-62203728 None:intergenic
CAGGATGAGGAACTCTACGG+CGG 0.727992 7_4:-62203451 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATATATAAAAATTCTAATA+TGG - chr7_4:62200368-62200387 None:intergenic 10.0%
!! TTTATATATCAAAATAACAT+TGG + chr7_4:62200378-62200397 Msa1169260:intron 10.0%
!!! TTGTTTTTTTGTATTTTATT+GGG + chr7_4:62200401-62200420 Msa1169260:intron 10.0%
!! ATTGTATTATAATAAAGTTT+AGG + chr7_4:62201174-62201193 Msa1169260:intron 10.0%
!!! GTTGTTTTTTTGTATTTTAT+TGG + chr7_4:62200400-62200419 Msa1169260:intron 15.0%
!!! TGTTTTTTTGTATTTTATTG+GGG + chr7_4:62200402-62200421 Msa1169260:intron 15.0%
!! TTGTTAAATTATATATGAAG+AGG - chr7_4:62201779-62201798 None:intergenic 15.0%
!! ATATGAAAAAATTTGGATTA+TGG - chr7_4:62201938-62201957 None:intergenic 15.0%
!!! AATTTTGTCTGTATTTTTTA+TGG + chr7_4:62202156-62202175 Msa1169260:intron 15.0%
!!! TTTTTATCTAAATTTTGTTC+AGG + chr7_4:62202213-62202232 Msa1169260:intron 15.0%
!! TTGTTAAATTATATATGAAG+AGG - chr7_4:62201779-62201798 None:intergenic 15.0%
!! ATATGAAAAAATTTGGATTA+TGG - chr7_4:62201938-62201957 None:intergenic 15.0%
!! AACTGTTTATAAAATGATTT+CGG + chr7_4:62201962-62201981 Msa1169260:intron 15.0%
!!! AATTTTGTCTGTATTTTTTA+TGG + chr7_4:62202156-62202175 Msa1169260:intron 15.0%
!!! TTTTTATCTAAATTTTGTTC+AGG + chr7_4:62202213-62202232 Msa1169260:intron 15.0%
!! TCAATTATTGTATTAACTAT+TGG + chr7_4:62203262-62203281 Msa1169260:intron 15.0%
!! TTATATGTATTTGTTTATTG+TGG + chr7_4:62203743-62203762 Msa1169260:three_prime_UTR 15.0%
!!! TTTATGACTAGTTTTTTAAT+TGG + chr7_4:62203962-62203981 Msa1169260:three_prime_UTR 15.0%
!! TAGAAGAGAAATAAAAGAAA+GGG - chr7_4:62199704-62199723 None:intergenic 20.0%
!! TTAGAAGAGAAATAAAAGAA+AGG - chr7_4:62199705-62199724 None:intergenic 20.0%
!!! ATTTTGTGAGTTGATAAAAT+TGG + chr7_4:62199769-62199788 Msa1169260:intron 20.0%
!!! TTTTGTGAGTTGATAAAATT+GGG + chr7_4:62199770-62199789 Msa1169260:intron 20.0%
!!! TTTTTTTGAGGAGAATTTTA+GGG + chr7_4:62199795-62199814 Msa1169260:intron 20.0%
!!! GAATTATTTTTCCTAACAAA+GGG - chr7_4:62199848-62199867 None:intergenic 20.0%
!!! TGAATTATTTTTCCTAACAA+AGG - chr7_4:62199849-62199868 None:intergenic 20.0%
!!! TATCATAAGAATTTTGACTT+TGG + chr7_4:62199912-62199931 Msa1169260:intron 20.0%
!!! TTATAAAATCGTTTGGTTTA+GGG - chr7_4:62199997-62200016 None:intergenic 20.0%
!!! ATTATAAAATCGTTTGGTTT+AGG - chr7_4:62199998-62200017 None:intergenic 20.0%
!! ATGAACATTATAAAATCGTT+TGG - chr7_4:62200004-62200023 None:intergenic 20.0%
!!! TATTTGATATGTTTTCGATA+TGG + chr7_4:62200494-62200513 Msa1169260:intron 20.0%
!!! AATAATCAAACTTTTGAACA+CGG - chr7_4:62201239-62201258 None:intergenic 20.0%
!! AAATAAAATAGCTGTATAGA+GGG + chr7_4:62201417-62201436 Msa1169260:intron 20.0%
!!! CACATTTTAAATATTTTGAG+AGG - chr7_4:62201688-62201707 None:intergenic 20.0%
!! GTTATGCATATGAAAAAATT+TGG - chr7_4:62201945-62201964 None:intergenic 20.0%
!!! GTACTTGAAATATTTTTATG+TGG + chr7_4:62201983-62202002 Msa1169260:intron 20.0%
!! ATATATGATATCCATTGTAA+CGG - chr7_4:62202051-62202070 None:intergenic 20.0%
!! TAAAAAAATATCCCAATGAT+AGG - chr7_4:62202199-62202218 None:intergenic 20.0%
!! TTTCATCTATGAATTACTTT+GGG - chr7_4:62202299-62202318 None:intergenic 20.0%
!!! TTTTCATCTATGAATTACTT+TGG - chr7_4:62202300-62202319 None:intergenic 20.0%
!! AAAGTAATTCATAGATGAAA+AGG + chr7_4:62202299-62202318 Msa1169260:intron 20.0%
!!! CACATTTTAAATATTTTGAG+AGG - chr7_4:62201688-62201707 None:intergenic 20.0%
!! GTTATGCATATGAAAAAATT+TGG - chr7_4:62201945-62201964 None:intergenic 20.0%
!! ATATATGATATCCATTGTAA+CGG - chr7_4:62202051-62202070 None:intergenic 20.0%
!! TAAAAAAATATCCCAATGAT+AGG - chr7_4:62202199-62202218 None:intergenic 20.0%
!! TTTCATCTATGAATTACTTT+GGG - chr7_4:62202299-62202318 None:intergenic 20.0%
!!! TTTTCATCTATGAATTACTT+TGG - chr7_4:62202300-62202319 None:intergenic 20.0%
!! AAAGTAATTCATAGATGAAA+AGG + chr7_4:62202299-62202318 Msa1169260:intron 20.0%
!! TATACTCTTTAAATATGAGA+AGG + chr7_4:62203235-62203254 Msa1169260:intron 20.0%
!!! TGAAGCAAAATTTGTTATTA+AGG + chr7_4:62203795-62203814 Msa1169260:three_prime_UTR 20.0%
!!! GAAGCAAAATTTGTTATTAA+GGG + chr7_4:62203796-62203815 Msa1169260:three_prime_UTR 20.0%
!!! AACTTGTTCTATAATAAAAC+AGG - chr7_4:62203926-62203945 None:intergenic 20.0%
!! AAAAACTAGTCATAAAACAA+GGG - chr7_4:62203958-62203977 None:intergenic 20.0%
!! AAAAAACTAGTCATAAAACA+AGG - chr7_4:62203959-62203978 None:intergenic 20.0%
!! TCTCCAGTATTATATTTTGT+TGG + chr7_4:62199366-62199385 Msa1169260:five_prime_UTR 25.0%
! TCACCAACAAAATATAATAC+TGG - chr7_4:62199372-62199391 None:intergenic 25.0%
! AATTCATCAATCATCATCAA+TGG + chr7_4:62199414-62199433 Msa1169260:exon 25.0%
!!! TTTGTGAGTTGATAAAATTG+GGG + chr7_4:62199771-62199790 Msa1169260:intron 25.0%
!!! GTTTTTTTGAGGAGAATTTT+AGG + chr7_4:62199794-62199813 Msa1169260:intron 25.0%
! ATTCTATGTTTATTATGTGC+AGG + chr7_4:62199935-62199954 Msa1169260:intron 25.0%
! TCAAAATCCACAACATAATA+AGG - chr7_4:62199965-62199984 None:intergenic 25.0%
! ATCAAAAGTGAATTCTATTG+TGG + chr7_4:62200027-62200046 Msa1169260:intron 25.0%
!! ATAATTTTACGTATTGTCCA+TGG - chr7_4:62200074-62200093 None:intergenic 25.0%
!! TATCAGTTTGTTCAAAACAT+CGG - chr7_4:62200200-62200219 None:intergenic 25.0%
! TGAACAAACTGATATCAATT+AGG + chr7_4:62200206-62200225 Msa1169260:intron 25.0%
!! AAAAGCGGATAAATGTTTTA+GGG - chr7_4:62200522-62200541 None:intergenic 25.0%
!! TAAAAGCGGATAAATGTTTT+AGG - chr7_4:62200523-62200542 None:intergenic 25.0%
! TATCATCACTACATAATAAG+AGG - chr7_4:62200799-62200818 None:intergenic 25.0%
! AATGTTGTAATGAAACTAGT+TGG - chr7_4:62200974-62200993 None:intergenic 25.0%
!!! GATTATTTTATAATGCAGTG+CGG + chr7_4:62201252-62201271 Msa1169260:intron 25.0%
! TAACTGTCATAAAAATACCA+CGG + chr7_4:62201343-62201362 Msa1169260:intron 25.0%
! GAAATAAAATAGCTGTATAG+AGG + chr7_4:62201416-62201435 Msa1169260:intron 25.0%
!!! TGTCACACATTCATTTTTAT+AGG + chr7_4:62201609-62201628 Msa1169260:intron 25.0%
!!! GTCACACATTCATTTTTATA+GGG + chr7_4:62201610-62201629 Msa1169260:intron 25.0%
!!! TTAAATATTTTGAGAGGATC+TGG - chr7_4:62201682-62201701 None:intergenic 25.0%
! TACAGACAAAATTATCTTCA+TGG - chr7_4:62202149-62202168 None:intergenic 25.0%
! ATGAAAATAGTCCTATCATT+GGG + chr7_4:62202185-62202204 Msa1169260:intron 25.0%
! TTAAGCAAATACAAAGTTGA+TGG - chr7_4:62202257-62202276 None:intergenic 25.0%
!!! TGTCACACATTCATTTTTAT+AGG + chr7_4:62201609-62201628 Msa1169260:intron 25.0%
!!! GTCACACATTCATTTTTATA+GGG + chr7_4:62201610-62201629 Msa1169260:intron 25.0%
!!! TTAAATATTTTGAGAGGATC+TGG - chr7_4:62201682-62201701 None:intergenic 25.0%
!!! GGACTTGAAATATTTTTATG+TGG + chr7_4:62202817-62202836 Msa1169260:intron 25.0%
! TACAGACAAAATTATCTTCA+TGG - chr7_4:62202149-62202168 None:intergenic 25.0%
! ATGAAAATAGTCCTATCATT+GGG + chr7_4:62202185-62202204 Msa1169260:intron 25.0%
! TTAAGCAAATACAAAGTTGA+TGG - chr7_4:62202257-62202276 None:intergenic 25.0%
!! CATATTTAAAGAGTATAACG+TGG - chr7_4:62203232-62203251 None:intergenic 25.0%
!!! AAAATTTGTTATTAAGGGCA+TGG + chr7_4:62203801-62203820 Msa1169260:three_prime_UTR 25.0%
! AAAACTAGTCATAAAACAAG+GGG - chr7_4:62203957-62203976 None:intergenic 25.0%
ATTTCGGAGAAAATAGATGT+CGG - chr7_4:62199329-62199348 None:intergenic 30.0%
GAGAGAGATATGAGAAATTT+CGG - chr7_4:62199345-62199364 None:intergenic 30.0%
!! TTGTGAGTTGATAAAATTGG+GGG + chr7_4:62199772-62199791 Msa1169260:intron 30.0%
!!! TAAAATTGGGGGTTTTTTTG+AGG + chr7_4:62199783-62199802 Msa1169260:intron 30.0%
AGGTTAACCTTATTATGTTG+TGG + chr7_4:62199955-62199974 Msa1169260:intron 30.0%
! CACGACTTTTCTCATATTTA+CGG + chr7_4:62200134-62200153 Msa1169260:intron 30.0%
AGTAGACTAGTAGATGTTAA+TGG - chr7_4:62200262-62200281 None:intergenic 30.0%
GGAAATAGACGAAAGAAAAT+GGG + chr7_4:62200423-62200442 Msa1169260:intron 30.0%
AACATATCAAATAGAGCAAG+AGG - chr7_4:62200487-62200506 None:intergenic 30.0%
!! CATTTATCCGCTTTTACTTA+TGG + chr7_4:62200527-62200546 Msa1169260:intron 30.0%
AGTTCAACCATAAGTAAAAG+CGG - chr7_4:62200537-62200556 None:intergenic 30.0%
AATCACTGTTTGCATTATTC+TGG + chr7_4:62200650-62200669 Msa1169260:CDS 30.0%
! AGTTTACACTTTGGTTCATT+CGG - chr7_4:62200933-62200952 None:intergenic 30.0%
GTAATGAAACTAGTTGGATT+CGG - chr7_4:62200968-62200987 None:intergenic 30.0%
ACTGTTCAGAAAAATAGTTC+AGG - chr7_4:62201087-62201106 None:intergenic 30.0%
CTGATTTCAAACTAATAGCT+CGG + chr7_4:62201205-62201224 Msa1169260:intron 30.0%
TTATGACAGTTAGCTATTGA+TGG - chr7_4:62201335-62201354 None:intergenic 30.0%
AAAATACCACGGTGATAAAT+TGG + chr7_4:62201354-62201373 Msa1169260:intron 30.0%
AAATACCACGGTGATAAATT+GGG + chr7_4:62201355-62201374 Msa1169260:intron 30.0%
ATAAATTGGGGAAAATTCTC+TGG + chr7_4:62201368-62201387 Msa1169260:intron 30.0%
GAGAAATGTATAGTAGCATA+GGG - chr7_4:62201539-62201558 None:intergenic 30.0%
AATTAGAACACTGAACTGAA+GGG - chr7_4:62201561-62201580 None:intergenic 30.0%
TTGATTGCAATCCATCTATA+TGG + chr7_4:62201579-62201598 Msa1169260:intron 30.0%
! TTGTCTTTTGGTATTTGATC+TGG + chr7_4:62201655-62201674 Msa1169260:intron 30.0%
ACAAAGTCAAGAAAACAACA+AGG - chr7_4:62201728-62201747 None:intergenic 30.0%
! TGAAGAGGTTTAAAGTACAA+GGG - chr7_4:62201764-62201783 None:intergenic 30.0%
! ATGAAGAGGTTTAAAGTACA+AGG - chr7_4:62201765-62201784 None:intergenic 30.0%
GATAGAGAATAAAAAATGCG+AGG - chr7_4:62201904-62201923 None:intergenic 30.0%
TGGATATCATATATCAACTG+TGG + chr7_4:62202057-62202076 Msa1169260:intron 30.0%
! CAATGATAGGACTATTTTCA+TGG - chr7_4:62202186-62202205 None:intergenic 30.0%
CATGAAAATAGTCCTATCAT+TGG + chr7_4:62202184-62202203 Msa1169260:intron 30.0%
ACAATTGAATTCCAGATTAG+TGG + chr7_4:62202325-62202344 Msa1169260:intron 30.0%
GAGAAATGTATAGTAGCATA+GGG - chr7_4:62201539-62201558 None:intergenic 30.0%
AATTAGAACACTGAACTGAA+GGG - chr7_4:62201561-62201580 None:intergenic 30.0%
TTGATTGCAATCCATCTATA+TGG + chr7_4:62201579-62201598 Msa1169260:intron 30.0%
! TTGTCTTTTGGTATTTGATC+TGG + chr7_4:62201655-62201674 Msa1169260:intron 30.0%
ACAAAGTCAAGAAAACAACA+AGG - chr7_4:62201728-62201747 None:intergenic 30.0%
! TGAAGAGGTTTAAAGTACAA+GGG - chr7_4:62201764-62201783 None:intergenic 30.0%
! ATGAAGAGGTTTAAAGTACA+AGG - chr7_4:62201765-62201784 None:intergenic 30.0%
GATAGAGAATAAAAAATGCG+AGG - chr7_4:62201904-62201923 None:intergenic 30.0%
! CAATGATAGGACTATTTTCA+TGG - chr7_4:62202186-62202205 None:intergenic 30.0%
CATGAAAATAGTCCTATCAT+TGG + chr7_4:62202184-62202203 Msa1169260:intron 30.0%
ACAATTGAATTCCAGATTAG+TGG + chr7_4:62202325-62202344 Msa1169260:intron 30.0%
TGGACCATAGAAAGATTATT+GGG - chr7_4:62203212-62203231 None:intergenic 30.0%
TTCAACGTCAAATCATATAG+AGG - chr7_4:62203596-62203615 None:intergenic 30.0%
ACATATAATACAGAACAGCA+GGG - chr7_4:62203731-62203750 None:intergenic 30.0%
TACATATAATACAGAACAGC+AGG - chr7_4:62203732-62203751 None:intergenic 30.0%
ATTATAGAACAAGTTGTCTC+CGG + chr7_4:62203931-62203950 Msa1169260:three_prime_UTR 30.0%
!! TGTTGTTGTTGTTTGAGAAG+AGG - chr7_4:62199481-62199500 None:intergenic 35.0%
AAGGGACATATTCTTGTACA+TGG - chr7_4:62199830-62199849 None:intergenic 35.0%
CAAGAATATGTCCCTTTGTT+AGG + chr7_4:62199834-62199853 Msa1169260:intron 35.0%
! AATCGTTTGGTTTAGGGTTA+TGG - chr7_4:62199991-62200010 None:intergenic 35.0%
! ATTTTACGTATTGTCCATGG+TGG - chr7_4:62200071-62200090 None:intergenic 35.0%
TTTGAATAGTATCGTGTCGT+TGG - chr7_4:62200105-62200124 None:intergenic 35.0%
TCTCATATTTACGGCTAAGA+CGG + chr7_4:62200143-62200162 Msa1169260:intron 35.0%
!! TTTTAAGTACTAGTCCACGT+TGG + chr7_4:62200324-62200343 Msa1169260:intron 35.0%
GGGAAATAGACGAAAGAAAA+TGG + chr7_4:62200422-62200441 Msa1169260:intron 35.0%
! GCTTTTACTTATGGTTGAAC+TGG + chr7_4:62200536-62200555 Msa1169260:intron 35.0%
AGAGACTTCATTCTAATCCT+GGG + chr7_4:62200618-62200637 Msa1169260:CDS 35.0%
TATTCTGGACTGTATGTGAT+TGG + chr7_4:62200665-62200684 Msa1169260:CDS 35.0%
ATTCTGGACTGTATGTGATT+GGG + chr7_4:62200666-62200685 Msa1169260:CDS 35.0%
! ACCTATTGTGATTTGTGATG+TGG + chr7_4:62200828-62200847 Msa1169260:intron 35.0%
! CAAACTTTTGAACACGGTTT+GGG - chr7_4:62201233-62201252 None:intergenic 35.0%
! TCAAACTTTTGAACACGGTT+TGG - chr7_4:62201234-62201253 None:intergenic 35.0%
AATACCACGGTGATAAATTG+GGG + chr7_4:62201356-62201375 Msa1169260:intron 35.0%
GGAGAAATGTATAGTAGCAT+AGG - chr7_4:62201540-62201559 None:intergenic 35.0%
CAATTAGAACACTGAACTGA+AGG - chr7_4:62201562-62201581 None:intergenic 35.0%
! GCACATGTACTTTTGTCTTT+TGG + chr7_4:62201643-62201662 Msa1169260:intron 35.0%
! AAGACCTAATTTGCATGTTG+GGG - chr7_4:62201852-62201871 None:intergenic 35.0%
! GAAGACCTAATTTGCATGTT+GGG - chr7_4:62201853-62201872 None:intergenic 35.0%
! AGAAGACCTAATTTGCATGT+TGG - chr7_4:62201854-62201873 None:intergenic 35.0%
AAACTAAAACGACTCAGTAC+AGG - chr7_4:62202087-62202106 None:intergenic 35.0%
GGAGAAATGTATAGTAGCAT+AGG - chr7_4:62201540-62201559 None:intergenic 35.0%
CAATTAGAACACTGAACTGA+AGG - chr7_4:62201562-62201581 None:intergenic 35.0%
! GCACATGTACTTTTGTCTTT+TGG + chr7_4:62201643-62201662 Msa1169260:intron 35.0%
! AAGACCTAATTTGCATGTTG+GGG - chr7_4:62201852-62201871 None:intergenic 35.0%
! GAAGACCTAATTTGCATGTT+GGG - chr7_4:62201853-62201872 None:intergenic 35.0%
! AGAAGACCTAATTTGCATGT+TGG - chr7_4:62201854-62201873 None:intergenic 35.0%
! TGGATATCATATATCGACTG+TGG + chr7_4:62202891-62202910 Msa1169260:intron 35.0%
AAACTAAAACGACTCAGTAC+AGG - chr7_4:62202087-62202106 None:intergenic 35.0%
ACCATAGAAAGATTATTGGG+GGG - chr7_4:62203209-62203228 None:intergenic 35.0%
GACCATAGAAAGATTATTGG+GGG - chr7_4:62203210-62203229 None:intergenic 35.0%
GGACCATAGAAAGATTATTG+GGG - chr7_4:62203211-62203230 None:intergenic 35.0%
GTGGACCATAGAAAGATTAT+TGG - chr7_4:62203213-62203232 None:intergenic 35.0%
! ATTGGTGATCCTTGAAAATC+AGG + chr7_4:62203280-62203299 Msa1169260:intron 35.0%
! TTGGTGATCCTTGAAAATCA+GGG + chr7_4:62203281-62203300 Msa1169260:intron 35.0%
! GAAGTTGTGAGGCATTTAAT+AGG + chr7_4:62203303-62203322 Msa1169260:CDS 35.0%
AGGCATTTAATAGGTCATGT+GGG + chr7_4:62203312-62203331 Msa1169260:CDS 35.0%
AAGAAAATTCTTCCTCGTCT+TGG + chr7_4:62203541-62203560 Msa1169260:exon 35.0%
CAAAATCAGGAGAGAGAAAA+GGG - chr7_4:62203631-62203650 None:intergenic 35.0%
! ATGCACTTTTCAGCAAAATC+AGG - chr7_4:62203644-62203663 None:intergenic 35.0%
!! TTTTGCTGAAAAGTGCATCT+TGG + chr7_4:62203646-62203665 Msa1169260:three_prime_UTR 35.0%
! AAAAGTGCATCTTGGTTCTT+TGG + chr7_4:62203654-62203673 Msa1169260:three_prime_UTR 35.0%
ACTCAATCACCAAGAAGAAG+AGG + chr7_4:62199450-62199469 Msa1169260:CDS 40.0%
TCGGTTGTTTGTTCAGCTTT+GGG - chr7_4:62199520-62199539 None:intergenic 40.0%
AAGATAATGATCCTGCTGCT+CGG - chr7_4:62199539-62199558 None:intergenic 40.0%
AGCAGGATCATTATCTTGGA+TGG + chr7_4:62199542-62199561 Msa1169260:CDS 40.0%
! TGCTGCAAAAGTGATCGTTT+TGG - chr7_4:62199660-62199679 None:intergenic 40.0%
AGACTGATGTCGTTCATCAT+TGG + chr7_4:62200288-62200307 Msa1169260:intron 40.0%
!! AGTATGAAGCGAAAGTGCTT+TGG + chr7_4:62200453-62200472 Msa1169260:intron 40.0%
TGTGCTGTATGGAAGCAATA+TGG + chr7_4:62200595-62200614 Msa1169260:CDS 40.0%
GAGAGACTTCATTCTAATCC+TGG + chr7_4:62200617-62200636 Msa1169260:CDS 40.0%
CATTCTAATCCTGGGACATT+TGG + chr7_4:62200626-62200645 Msa1169260:CDS 40.0%
GTGATTGGGAATTCATGCTT+TGG + chr7_4:62200680-62200699 Msa1169260:CDS 40.0%
TTGGGAATTCATGCTTTGGT+TGG + chr7_4:62200684-62200703 Msa1169260:CDS 40.0%
GCCACATCACAAATCACAAT+AGG - chr7_4:62200832-62200851 None:intergenic 40.0%
!! ACTGAACAACTGGTTTGGTT+CGG - chr7_4:62200999-62201018 None:intergenic 40.0%
ACCAAACCAGTTGTTCAGTT+TGG + chr7_4:62201000-62201019 Msa1169260:intron 40.0%
ACCAAACTGAACAACTGGTT+TGG - chr7_4:62201004-62201023 None:intergenic 40.0%
AATACCTTGCCCACTCAATA+CGG - chr7_4:62201305-62201324 None:intergenic 40.0%
! CAGTTAGCTATTGATGGTCA+TGG - chr7_4:62201329-62201348 None:intergenic 40.0%
! TTTTCCCCAATTTATCACCG+TGG - chr7_4:62201363-62201382 None:intergenic 40.0%
AAAATAGCTGTATAGAGGGC+AGG + chr7_4:62201421-62201440 Msa1169260:intron 40.0%
AGAACTAGCATATAGAGCGT+AGG + chr7_4:62201461-62201480 Msa1169260:intron 40.0%
ATAGAGCGTAGGTAAGTAAG+TGG + chr7_4:62201472-62201491 Msa1169260:intron 40.0%
AGGTAAGTAAGTGGTGTCTA+AGG + chr7_4:62201481-62201500 Msa1169260:intron 40.0%
! AGTAGCATAGGGCATTCTAA+AGG - chr7_4:62201528-62201547 None:intergenic 40.0%
GTCAAGAAAACAACAAGGCA+AGG - chr7_4:62201723-62201742 None:intergenic 40.0%
GGTCTTCTACTATGTTAAGC+TGG + chr7_4:62201866-62201885 Msa1169260:intron 40.0%
TCCAAGTAGTTCCGTTACAA+TGG + chr7_4:62202037-62202056 Msa1169260:intron 40.0%
! TCCATTGTAACGGAACTACT+TGG - chr7_4:62202041-62202060 None:intergenic 40.0%
ATCTCATTGCTCCACTAATC+TGG - chr7_4:62202339-62202358 None:intergenic 40.0%
TATAGTAGCATAGGGCAGAA+AGG - chr7_4:62202365-62202384 None:intergenic 40.0%
GTCAAGAAAACAACAAGGCA+AGG - chr7_4:62201723-62201742 None:intergenic 40.0%
GGTCTTCTACTATGTTAAGC+TGG + chr7_4:62201866-62201885 Msa1169260:intron 40.0%
TCCAAGTAGTTCCGTTACAA+TGG + chr7_4:62202037-62202056 Msa1169260:intron 40.0%
! TCCATTGTAACGGAACTACT+TGG - chr7_4:62202041-62202060 None:intergenic 40.0%
ATCTCATTGCTCCACTAATC+TGG - chr7_4:62202339-62202358 None:intergenic 40.0%
CATAGAAAGATTATTGGGGG+GGG - chr7_4:62203207-62203226 None:intergenic 40.0%
CCATAGAAAGATTATTGGGG+GGG - chr7_4:62203208-62203227 None:intergenic 40.0%
! CACAACTTCCCTGATTTTCA+AGG - chr7_4:62203292-62203311 None:intergenic 40.0%
TGAAAATCAGGGAAGTTGTG+AGG + chr7_4:62203292-62203311 Msa1169260:intron 40.0%
! GAGGCATTTAATAGGTCATG+TGG + chr7_4:62203311-62203330 Msa1169260:CDS 40.0%
CGGAAGCTATTTGGAAAATG+AGG + chr7_4:62203340-62203359 Msa1169260:CDS 40.0%
CTTCAATGCACAACCAGTAT+TGG + chr7_4:62203475-62203494 Msa1169260:CDS 40.0%
AAAATTCTTCCTCGTCTTGG+AGG + chr7_4:62203544-62203563 Msa1169260:three_prime_UTR 40.0%
AGAGAAAAGGGAGCAAATGA+CGG - chr7_4:62203619-62203638 None:intergenic 40.0%
GCAAAATCAGGAGAGAGAAA+AGG - chr7_4:62203632-62203651 None:intergenic 40.0%
! GCATCTTGGTTCTTTGGATT+TGG + chr7_4:62203660-62203679 Msa1169260:three_prime_UTR 40.0%
! ATTAAGGGCATGGTTCTGTA+TGG + chr7_4:62203811-62203830 Msa1169260:three_prime_UTR 40.0%
!! GTTGTTTGTTCAGCTTTGGG+AGG - chr7_4:62199517-62199536 None:intergenic 45.0%
CTCGGTTGTTTGTTCAGCTT+TGG - chr7_4:62199521-62199540 None:intergenic 45.0%
GAGCAGCAGGATCATTATCT+TGG + chr7_4:62199538-62199557 Msa1169260:CDS 45.0%
TTCCAAGGAGAACGAGGAAT+GGG - chr7_4:62199613-62199632 None:intergenic 45.0%
GATGAACGACATCAGTCTCT+TGG - chr7_4:62200286-62200305 None:intergenic 45.0%
CCTTAATAAGCAGTCCAACG+TGG - chr7_4:62200341-62200360 None:intergenic 45.0%
CCACGTTGGACTGCTTATTA+AGG + chr7_4:62200338-62200357 Msa1169260:intron 45.0%
GATACGTGCTAGGTCTTCTT+GGG + chr7_4:62200558-62200577 Msa1169260:intron 45.0%
TTGCTTCCATACAGCACACA+AGG - chr7_4:62200593-62200612 None:intergenic 45.0%
CGGCTATGATATGAAAGCCA+GGG - chr7_4:62200722-62200741 None:intergenic 45.0%
ACGGCTATGATATGAAAGCC+AGG - chr7_4:62200723-62200742 None:intergenic 45.0%
CCTCTAAATTGAACCTGCGA+CGG - chr7_4:62200754-62200773 None:intergenic 45.0%
! ACACTTTGGTTCATTCGGCT+TGG - chr7_4:62200928-62200947 None:intergenic 45.0%
GAGCGAACGAGTTTACACTT+TGG - chr7_4:62200942-62200961 None:intergenic 45.0%
AGTGCACCAAACTGAACAAC+TGG - chr7_4:62201009-62201028 None:intergenic 45.0%
! TTTTGAACGCCCGTATTGAG+TGG + chr7_4:62201292-62201311 Msa1169260:intron 45.0%
TTTGAACGCCCGTATTGAGT+GGG + chr7_4:62201293-62201312 Msa1169260:intron 45.0%
ATACCTTGCCCACTCAATAC+GGG - chr7_4:62201304-62201323 None:intergenic 45.0%
CTGGTAACATGTACGCTACA+AGG + chr7_4:62201387-62201406 Msa1169260:intron 45.0%
GTCTAAGGAGTAGAGTACAG+AGG + chr7_4:62201496-62201515 Msa1169260:intron 45.0%
GACAACAGCAGCCATATAGA+TGG - chr7_4:62201593-62201612 None:intergenic 45.0%
CACTCCCCAACATGCAAATT+AGG + chr7_4:62201845-62201864 Msa1169260:intron 45.0%
! GTAACGGAACTACTTGGACA+AGG - chr7_4:62202035-62202054 None:intergenic 45.0%
GACAACAGCAGCCATATAGA+TGG - chr7_4:62201593-62201612 None:intergenic 45.0%
CACTCCCCAACATGCAAATT+AGG + chr7_4:62201845-62201864 Msa1169260:intron 45.0%
! GTAACGGAACTACTTGGACA+AGG - chr7_4:62202035-62202054 None:intergenic 45.0%
CCCCCCCAATAATCTTTCTA+TGG + chr7_4:62203205-62203224 Msa1169260:intron 45.0%
GCAGCGTGAACATTATGAGT+TGG + chr7_4:62203364-62203383 Msa1169260:CDS 45.0%
GTCTGTGCTCTTTGTCAAGA+AGG + chr7_4:62203419-62203438 Msa1169260:CDS 45.0%
GGGGGAATCATAACCAATAC+TGG - chr7_4:62203491-62203510 None:intergenic 45.0%
!! GTATTGGTTATGATTCCCCC+AGG + chr7_4:62203491-62203510 Msa1169260:CDS 45.0%
CTAGTCATAAAACAAGGGGC+CGG - chr7_4:62203953-62203972 None:intergenic 45.0%
!! GTTTGTTCAGCTTTGGGAGG+TGG - chr7_4:62199514-62199533 None:intergenic 50.0%
TGAACAAACAACCGAGCAGC+AGG + chr7_4:62199525-62199544 Msa1169260:CDS 50.0%
ATGACGCTTCCATGGCCAAT+CGG - chr7_4:62199583-62199602 None:intergenic 50.0%
!! ATTGGCCATGGAAGCGTCAT+GGG + chr7_4:62199583-62199602 Msa1169260:CDS 50.0%
GTTCCAAGGAGAACGAGGAA+TGG - chr7_4:62199614-62199633 None:intergenic 50.0%
GGTTGAACTGGATACGTGCT+AGG + chr7_4:62200548-62200567 Msa1169260:intron 50.0%
GGATACGTGCTAGGTCTTCT+TGG + chr7_4:62200557-62200576 Msa1169260:intron 50.0%
CAGTGATTGCCAAATGTCCC+AGG - chr7_4:62200638-62200657 None:intergenic 50.0%
GTTGGAATTGTCTTGCACCC+TGG + chr7_4:62200702-62200721 Msa1169260:CDS 50.0%
! ACCTGCGACGGATTTCAGTA+CGG - chr7_4:62200742-62200761 None:intergenic 50.0%
CCGTCGCAGGTTCAATTTAG+AGG + chr7_4:62200751-62200770 Msa1169260:CDS 50.0%
! TGATTTGTGATGTGGCTGCG+AGG + chr7_4:62200836-62200855 Msa1169260:intron 50.0%
TGGCTGCGAGGAAGAATTGT+AGG + chr7_4:62200848-62200867 Msa1169260:intron 50.0%
AGGCAGGGGTGGTCAAAATT+TGG + chr7_4:62200888-62200907 Msa1169260:intron 50.0%
ATAGAGGGCAGGCAAGTAAG+TGG + chr7_4:62201432-62201451 Msa1169260:intron 50.0%
GGAGTAGAGTACAGAGGTCA+AGG + chr7_4:62201502-62201521 Msa1169260:intron 50.0%
! AATAGGTCATGTGGGTGCTG+CGG + chr7_4:62203320-62203339 Msa1169260:CDS 50.0%
AGCCAGGATGAGGAACTCTA+CGG - chr7_4:62203457-62203476 None:intergenic 50.0%
TGTGCATTGAAGCCAGGATG+AGG - chr7_4:62203467-62203486 None:intergenic 50.0%
ACTGGTTGTGCATTGAAGCC+AGG - chr7_4:62203473-62203492 None:intergenic 50.0%
AGAATAGCACCTCCAAGACG+AGG - chr7_4:62203556-62203575 None:intergenic 50.0%
GAGGACTCGCCTCTTCTTCT+TGG - chr7_4:62199462-62199481 None:intergenic 55.0%
TATCTTGGATGGACCGCCGA+TGG + chr7_4:62199553-62199572 Msa1169260:CDS 55.0%
ATCTTGGATGGACCGCCGAT+GGG + chr7_4:62199554-62199573 Msa1169260:CDS 55.0%
ATGGCCAATCGGAAGCCCAT+CGG - chr7_4:62199572-62199591 None:intergenic 55.0%
!! GATTGGCCATGGAAGCGTCA+TGG + chr7_4:62199582-62199601 Msa1169260:CDS 55.0%
AGCCCATTCCTCGTTCTCCT+TGG + chr7_4:62199608-62199627 Msa1169260:CDS 55.0%
GAGGAGTTCCAAGGAGAACG+AGG - chr7_4:62199619-62199638 None:intergenic 55.0%
TTGGCCAAGACAAGCGCAGA+CGG - chr7_4:62199641-62199660 None:intergenic 55.0%
TTGTGGACCTCCTTCGTACG+TGG + chr7_4:62200044-62200063 Msa1169260:intron 55.0%
GCTAGGTCTTCTTGGGAGTG+TGG + chr7_4:62200565-62200584 Msa1169260:intron 55.0%
GTGGCTCCTTGTGTGCTGTA+TGG + chr7_4:62200584-62200603 Msa1169260:CDS 55.0%
GATTATTGGGGGGGGCAGAA+AGG - chr7_4:62203199-62203218 None:intergenic 55.0%
! TGGGTGCTGCGGAAGCTATT+TGG + chr7_4:62203331-62203350 Msa1169260:CDS 55.0%
CAGGATGAGGAACTCTACGG+CGG - chr7_4:62203454-62203473 None:intergenic 55.0%
!! ACCCATGGTTTGCTCTCCTG+GGG - chr7_4:62203510-62203529 None:intergenic 55.0%
!! GACCCATGGTTTGCTCTCCT+GGG - chr7_4:62203511-62203530 None:intergenic 55.0%
GAGAGCAAACCATGGGTCGT+GGG + chr7_4:62203513-62203532 Msa1169260:CDS 55.0%
AGAGCAAACCATGGGTCGTG+GGG + chr7_4:62203514-62203533 Msa1169260:CDS 55.0%
! GATGGGCTTCCGATTGGCCA+TGG + chr7_4:62199571-62199590 Msa1169260:CDS 60.0%
GCTGACCCATGACGCTTCCA+TGG - chr7_4:62199591-62199610 None:intergenic 60.0%
TCCTCCGTCTGCGCTTGTCT+TGG + chr7_4:62199634-62199653 Msa1169260:CDS 60.0%
! TGGTGGACCACGTACGAAGG+AGG - chr7_4:62200054-62200073 None:intergenic 60.0%
!! CCATGGTGGACCACGTACGA+AGG - chr7_4:62200057-62200076 None:intergenic 60.0%
CCTTCGTACGTGGTCCACCA+TGG + chr7_4:62200054-62200073 Msa1169260:intron 60.0%
GCCGTACTGAAATCCGTCGC+AGG + chr7_4:62200738-62200757 Msa1169260:CDS 60.0%
AGGTGACCAGAAGCCCTGAG+AGG + chr7_4:62200868-62200887 Msa1169260:intron 60.0%
ACCAGAAGCCCTGAGAGGCA+GGG + chr7_4:62200873-62200892 Msa1169260:intron 60.0%
TTGACCACCCCTGCCTCTCA+GGG - chr7_4:62200884-62200903 None:intergenic 60.0%
TTTGACCACCCCTGCCTCTC+AGG - chr7_4:62200885-62200904 None:intergenic 60.0%
ACGCCCGTATTGAGTGGGCA+AGG + chr7_4:62201298-62201317 Msa1169260:intron 60.0%
CGCCGTAGAGTTCCTCATCC+TGG + chr7_4:62203452-62203471 Msa1169260:CDS 60.0%
TCCCCCAGGAGAGCAAACCA+TGG + chr7_4:62203505-62203524 Msa1169260:CDS 60.0%
!! CCCATGGTTTGCTCTCCTGG+GGG - chr7_4:62203509-62203528 None:intergenic 60.0%
CCCCCAGGAGAGCAAACCAT+GGG + chr7_4:62203506-62203525 Msa1169260:CDS 60.0%
!! CGACCCATGGTTTGCTCTCC+TGG - chr7_4:62203512-62203531 None:intergenic 60.0%
GGAGAGCAAACCATGGGTCG+TGG + chr7_4:62203512-62203531 Msa1169260:CDS 60.0%
TCTTCAAGCCCCACGACCCA+TGG - chr7_4:62203525-62203544 None:intergenic 60.0%
! ACCGCCGATGGGCTTCCGAT+TGG + chr7_4:62199565-62199584 Msa1169260:CDS 65.0%
GCCAATCGGAAGCCCATCGG+CGG - chr7_4:62199569-62199588 None:intergenic 65.0%
GCGCAGACGGAGGAGTTCCA+AGG - chr7_4:62199628-62199647 None:intergenic 65.0%
GCCAAGACAAGCGCAGACGG+AGG - chr7_4:62199638-62199657 None:intergenic 65.0%
GACCAGAAGCCCTGAGAGGC+AGG + chr7_4:62200872-62200891 Msa1169260:intron 65.0%
CCAGAAGCCCTGAGAGGCAG+GGG + chr7_4:62200874-62200893 Msa1169260:intron 65.0%
CCCCTGCCTCTCAGGGCTTC+TGG - chr7_4:62200877-62200896 None:intergenic 70.0%
GAAGCCCTGAGAGGCAGGGG+TGG + chr7_4:62200877-62200896 Msa1169260:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 62199266 62203995 62199266 ID=Msa1169260;Name=Msa1169260
chr7_4 mRNA 62199266 62203995 62199266 ID=Msa1169260-mRNA-1;Parent=Msa1169260;Name=Msa1169260-mRNA-1;_AED=0.06;_eAED=0.06;_QI=167|1|1|1|1|1|3|454|234
chr7_4 exon 62199266 62199694 62199266 ID=Msa1169260-mRNA-1:exon:19694;Parent=Msa1169260-mRNA-1
chr7_4 exon 62200570 62200772 62200570 ID=Msa1169260-mRNA-1:exon:19695;Parent=Msa1169260-mRNA-1
chr7_4 exon 62203302 62203995 62203302 ID=Msa1169260-mRNA-1:exon:19696;Parent=Msa1169260-mRNA-1
chr7_4 five_prime_UTR 62199266 62199432 62199266 ID=Msa1169260-mRNA-1:five_prime_utr;Parent=Msa1169260-mRNA-1
chr7_4 CDS 62199433 62199694 62199433 ID=Msa1169260-mRNA-1:cds;Parent=Msa1169260-mRNA-1
chr7_4 CDS 62200570 62200772 62200570 ID=Msa1169260-mRNA-1:cds;Parent=Msa1169260-mRNA-1
chr7_4 CDS 62203302 62203541 62203302 ID=Msa1169260-mRNA-1:cds;Parent=Msa1169260-mRNA-1
chr7_4 three_prime_UTR 62203542 62203995 62203542 ID=Msa1169260-mRNA-1:three_prime_utr;Parent=Msa1169260-mRNA-1
Gene Sequence

>Msa1169260

ATGGCTGAAGAGAAAAAACTCAATCACCAAGAAGAAGAGGCGAGTCCTCTTCTCAAACAACAACAACAACAACAACAACCACCTCCCAAAGCTGAACAAACAACCGAGCAGCAGGATCATTATCTTGGATGGACCGCCGATGGGCTTCCGATTGGCCATGGAAGCGTCATGGGTCAGCCCATTCCTCGTTCTCCTTGGAACTCCTCCGTCTGCGCTTGTCTTGGCCAAAACGATCACTTTTGCAGCAGCGATCTTGAAGTTTGTCTTCTTGGGAGTGTGGCTCCTTGTGTGCTGTATGGAAGCAATATGGAGAGACTTCATTCTAATCCTGGGACATTTGGCAATCACTGTTTGCATTATTCTGGACTGTATGTGATTGGGAATTCATGCTTTGGTTGGAATTGTCTTGCACCCTGGCTTTCATATCATAGCCGTACTGAAATCCGTCGCAGGTTCAATTTAGAGGGAAGTTGTGAGGCATTTAATAGGTCATGTGGGTGCTGCGGAAGCTATTTGGAAAATGAGGAGCAGCGTGAACATTATGAGTTGGCATGTGACTTTGCAACTCATGTCTTCTGTCATGTCTGTGCTCTTTGTCAAGAAGGTCGTGAGCTCCGCCGTAGAGTTCCTCATCCTGGCTTCAATGCACAACCAGTATTGGTTATGATTCCCCCAGGAGAGCAAACCATGGGTCGTGGGGCTTGA
Protein sequence

>Msa1169260

MAEEKKLNHQEEEASPLLKQQQQQQQPPPKAEQTTEQQDHYLGWTADGLPIGHGSVMGQPIPRSPWNSSVCACLGQNDHFCSSDLEVCLLGSVAPCVLYGSNMERLHSNPGTFGNHCLHYSGLYVIGNSCFGWNCLAPWLSYHSRTEIRRRFNLEGSCEAFNRSCGCCGSYLENEEQREHYELACDFATHVFCHVCALCQEGRELRRRVPHPGFNAQPVLVMIPPGEQTMGRGA*