AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1175140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175140 MtrunA17_Chr8g0345211 97.766 582 13 0 1 582 1 582 0.0 1186
Msa1175140 MtrunA17_Chr8g0354901 48.409 597 274 13 4 582 1 581 0.0 530
Msa1175140 MtrunA17_Chr3g0080391 45.791 594 287 13 4 582 1 574 1.35e-168 491
Msa1175140 MtrunA17_Chr3g0126771 40.415 579 310 12 23 578 27 593 3.78e-141 422
Msa1175140 MtrunA17_Chr1g0147051 39.555 584 312 13 23 578 33 603 8.44e-141 421
Msa1175140 MtrunA17_Chr4g0069841 45.629 469 221 9 125 582 71 516 6.52e-135 403
Msa1175140 MtrunA17_Chr7g0233801 42.578 512 265 10 80 578 54 549 1.67e-133 400
Msa1175140 MtrunA17_Chr8g0345281 39.896 579 312 11 26 578 17 585 2.93e-133 401
Msa1175140 MtrunA17_Chr8g0391291 43.186 521 262 11 81 582 34 539 4.81e-133 399
Msa1175140 MtrunA17_Chr8g0391311 42.802 521 264 11 81 582 36 541 3.61e-132 397
Msa1175140 MtrunA17_Chr7g0269541 39.279 555 318 6 35 578 6 552 3.05e-131 395
Msa1175140 MtrunA17_Chr7g0272141 42.406 507 271 8 81 578 44 538 1.83e-130 392
Msa1175140 MtrunA17_Chr7g0233831 40.069 579 298 12 18 578 4 551 6.69e-130 391
Msa1175140 MtrunA17_Chr7g0233771 41.211 512 273 8 80 578 54 550 2.45e-128 387
Msa1175140 MtrunA17_Chr4g0011771 42.248 516 258 12 77 582 28 513 1.23e-126 382
Msa1175140 MtrunA17_Chr2g0302021 43.929 453 229 8 134 578 86 521 2.69e-125 379
Msa1175140 MtrunA17_Chr1g0192321 36.210 591 327 13 24 580 7 581 3.75e-124 378
Msa1175140 MtrunA17_Chr4g0069891 36.711 602 334 12 6 576 2 587 4.86e-124 377
Msa1175140 MtrunA17_Chr1g0192301 38.220 573 330 13 27 582 10 575 6.48e-124 377
Msa1175140 MtrunA17_Chr4g0069861 44.667 450 219 10 140 578 83 513 1.09e-123 374
Msa1175140 MtrunA17_Chr1g0192331 42.829 516 254 13 81 578 32 524 5.04e-123 373
Msa1175140 MtrunA17_Chr7g0272151 36.379 580 336 12 24 578 8 579 1.64e-122 374
Msa1175140 MtrunA17_Chr1g0192311 38.246 570 321 16 27 578 10 566 3.51e-122 372
Msa1175140 MtrunA17_Chr1g0192281 38.246 570 321 16 27 578 10 566 3.51e-122 372
Msa1175140 MtrunA17_Chr1g0194091 36.444 568 323 12 42 578 5 565 9.15e-119 363
Msa1175140 MtrunA17_Chr2g0295551 38.534 532 297 12 27 548 14 525 2.07e-118 362
Msa1175140 MtrunA17_Chr4g0000121 37.388 559 326 12 37 578 2 553 3.49e-118 362
Msa1175140 MtrunA17_Chr1g0194081 37.961 569 319 14 32 579 5 560 1.69e-117 360
Msa1175140 MtrunA17_Chr4g0069881 39.219 538 291 14 55 582 24 535 2.01e-115 353
Msa1175140 MtrunA17_Chr4g0011791 39.453 512 277 11 75 582 27 509 9.93e-115 351
Msa1175140 MtrunA17_Chr3g0079351 39.376 513 279 10 81 582 36 527 1.23e-114 351
Msa1175140 MtrunA17_Chr7g0270651 36.696 575 323 11 32 576 5 568 1.91e-114 352
Msa1175140 MtrunA17_Chr2g0295531 37.887 549 294 15 27 566 14 524 2.49e-114 353
Msa1175140 MtrunA17_Chr3g0079341 39.258 512 281 9 81 582 36 527 5.62e-114 349
Msa1175140 MtrunA17_Chr3g0079361 39.306 519 271 11 81 582 36 527 4.37e-113 347
Msa1175140 MtrunA17_Chr1g0175661 40.764 471 245 11 139 582 95 558 4.69e-113 348
Msa1175140 MtrunA17_Chr3g0090091 38.417 518 278 10 81 582 36 528 3.08e-112 345
Msa1175140 MtrunA17_Chr7g0269511 38.587 552 298 14 62 582 23 564 1.15e-111 345
Msa1175140 MtrunA17_Chr7g0269531 38.899 545 283 17 68 578 33 561 5.70e-111 343
Msa1175140 MtrunA17_Chr4g0067601 37.363 546 311 11 25 556 13 541 1.21e-110 343
Msa1175140 MtrunA17_Chr4g0067611 36.937 555 317 13 16 556 6 541 3.28e-110 342
Msa1175140 MtrunA17_Chr1g0195301 39.958 473 248 11 139 582 90 555 1.76e-109 338
Msa1175140 MtrunA17_Chr1g0195321 39.958 473 248 11 139 582 90 555 1.76e-109 338
Msa1175140 MtrunA17_Chr1g0195331 40.169 473 247 11 139 582 90 555 1.90e-109 338
Msa1175140 MtrunA17_Chr7g0269521 37.430 537 285 15 78 578 37 558 2.05e-108 336
Msa1175140 MtrunA17_Chr4g0018371 38.803 518 283 14 81 582 40 539 7.92e-108 334
Msa1175140 MtrunA17_Chr1g0195351 39.958 473 246 12 139 582 90 553 4.55e-107 332
Msa1175140 MtrunA17_Chr7g0270661 34.948 578 334 11 28 576 4 568 1.20e-106 332
Msa1175140 MtrunA17_Chr7g0270671 34.948 578 334 11 28 576 4 568 1.20e-106 332
Msa1175140 MtrunA17_Chr8g0354911 38.156 553 265 16 81 578 78 608 7.60e-105 328
Msa1175140 MtrunA17_Chr2g0295541 36.057 563 299 13 27 548 14 556 3.99e-104 326
Msa1175140 MtrunA17_Chr4g0011751 41.809 409 213 6 175 576 93 483 4.50e-103 320
Msa1175140 MtrunA17_Chr3g0080381 36.648 543 293 13 79 578 90 624 7.48e-103 324
Msa1175140 MtrunA17_Chr7g0270631 36.981 530 301 10 72 571 25 551 5.72e-102 333
Msa1175140 MtrunA17_Chr7g0270631 35.253 573 325 12 39 578 551 1110 2.42e-95 315
Msa1175140 MtrunA17_Chr1g0195311 51.786 280 122 6 311 582 40 314 1.12e-95 295
Msa1175140 MtrunA17_Chr7g0270691 32.918 562 340 13 32 578 6 545 4.20e-94 299
Msa1175140 MtrunA17_Chr8g0380581 39.840 374 201 6 224 578 4 372 1.85e-92 289
Msa1175140 MtrunA17_Chr8g0384121 33.895 534 308 17 67 576 46 558 9.87e-88 283
Msa1175140 MtrunA17_Chr2g0301931 48.029 279 136 5 301 576 14 286 1.08e-86 271
Msa1175140 MtrunA17_Chr3g0129921 32.224 571 342 15 26 571 3 553 3.25e-86 278
Msa1175140 MtrunA17_Chr5g0437831 41.840 337 181 8 252 579 50 380 1.30e-83 266
Msa1175140 MtrunA17_Chr2g0302001 47.619 252 127 3 334 582 188 437 2.38e-79 256
Msa1175140 MtrunA17_Chr7g0234711 48.918 231 115 1 355 582 39 269 1.15e-72 233
Msa1175140 MtrunA17_Chr7g0268241 39.297 313 172 6 275 582 51 350 7.60e-69 226
Msa1175140 MtrunA17_Chr7g0271381 30.931 569 335 15 29 580 27 554 1.58e-66 226
Msa1175140 MtrunA17_Chr2g0334111 37.778 315 172 7 275 582 26 323 2.17e-65 216
Msa1175140 MtrunA17_Chr6g0453551 33.871 310 178 8 276 571 8 304 9.96e-51 177
Msa1175140 MtrunA17_Chr6g0487101 35.548 301 170 6 282 571 93 380 1.39e-49 176
Msa1175140 MtrunA17_Chr1g0194311 34.416 308 179 8 276 573 76 370 2.01e-49 175
Msa1175140 MtrunA17_Chr8g0389771 32.070 343 201 8 250 573 50 379 2.33e-49 175
Msa1175140 MtrunA17_Chr7g0258341 34.194 310 178 8 275 571 91 387 3.26e-47 170
Msa1175140 MtrunA17_Chr7g0217941 32.258 310 183 7 276 571 8 304 2.33e-46 165
Msa1175140 MtrunA17_Chr6g0466951 31.366 322 194 10 258 571 51 353 5.86e-41 152
Msa1175140 MtrunA17_Chr4g0070051 31.270 307 181 8 276 571 56 343 3.46e-40 149
Msa1175140 MtrunA17_Chr2g0299431 39.732 224 124 5 249 467 29 246 5.41e-40 147
Msa1175140 MtrunA17_Chr6g0466961 32.753 287 170 8 266 545 30 300 1.63e-39 147
Msa1175140 MtrunA17_Chr2g0294321 30.464 302 189 7 279 573 61 348 2.62e-36 139
Msa1175140 MtrunA17_Chr8g0391281 34.483 290 162 10 81 355 34 310 6.28e-34 131
Msa1175140 MtrunA17_Chr5g0446301 29.276 304 190 7 280 571 67 357 9.21e-34 132
Msa1175140 MtrunA17_Chr1g0161731 28.571 308 193 8 278 575 53 343 9.47e-34 131
Msa1175140 MtrunA17_Chr7g0265201 29.276 304 182 8 279 571 104 385 2.38e-33 131
Msa1175140 MtrunA17_Chr5g0440871 30.303 297 189 6 275 571 40 318 4.37e-33 129
Msa1175140 MtrunA17_Chr5g0399221 26.364 330 209 6 253 571 53 359 6.00e-33 129
Msa1175140 MtrunA17_Chr3g0092681 35.510 245 131 9 1 235 1 228 1.26e-32 125
Msa1175140 MtrunA17_Chr2g0295851 28.808 302 185 8 279 573 60 338 3.54e-32 127
Msa1175140 MtrunA17_Chr8g0391261 41.304 138 77 2 448 582 30 166 1.59e-30 117
Msa1175140 MtrunA17_Chr4g0037751 29.139 302 195 7 276 571 73 361 2.07e-30 122
Msa1175140 MtrunA17_Chr7g0234731 32.753 287 152 11 81 353 55 314 2.89e-30 121
Msa1175140 MtrunA17_Chr5g0420831 29.139 302 195 7 276 571 73 361 1.00e-29 120
Msa1175140 MtrunA17_Chr8g0351871 28.846 312 182 8 276 571 35 322 7.84e-29 117
Msa1175140 MtrunA17_Chr6g0459781 38.824 170 92 5 276 435 15 182 2.25e-28 112
Msa1175140 MtrunA17_Chr5g0437821 38.060 134 75 3 387 514 4 135 3.31e-24 98.6
Msa1175140 MtrunA17_Chr5g0440901 34.899 149 90 2 366 514 1 142 6.44e-24 98.2
Msa1175140 MtrunA17_Chr4g0025841 26.778 239 161 4 276 514 39 263 7.16e-22 95.9
Msa1175140 MtrunA17_Chr2g0314691 30.412 194 124 4 378 571 19 201 1.13e-20 90.5
Msa1175140 MtrunA17_Chr5g0440891 33.533 167 102 4 268 433 42 200 8.18e-20 88.2
Msa1175140 MtrunA17_Chr4g0073911 26.724 232 145 6 290 513 24 238 5.52e-17 80.9
Msa1175140 MtrunA17_Chr7g0265161 31.034 174 90 5 343 511 9 157 7.85e-17 80.5
Msa1175140 MtrunA17_Chr6g0460141 39.362 94 53 2 344 433 51 144 3.59e-16 75.9
Msa1175140 MtrunA17_Chr4g0018241 31.928 166 92 5 77 231 37 192 1.88e-13 69.3
Msa1175140 MtrunA17_Chr4g0018251 32.099 162 89 5 81 231 41 192 3.23e-13 68.9
Msa1175140 MtrunA17_Chr3g0079401 31.138 167 102 6 72 230 21 182 8.86e-13 67.4
Msa1175140 MtrunA17_Chr4g0018281 32.530 166 91 5 77 231 37 192 1.26e-12 67.0
Msa1175140 MtrunA17_Chr2g0301941 24.303 251 158 10 6 239 2 237 1.35e-12 69.7
Msa1175140 MtrunA17_Chr6g0459791 33.607 122 72 2 450 571 4 116 1.94e-12 64.3
Msa1175140 MtrunA17_Chr1g0195561 28.571 161 104 4 76 231 32 186 5.15e-12 65.1
Msa1175140 MtrunA17_Chr4g0067891 25.862 174 112 3 69 228 28 198 9.16e-12 64.7
Msa1175140 MtrunA17_Chr3g0079381 28.743 167 106 6 72 230 20 181 1.07e-11 63.9
Msa1175140 MtrunA17_Chr8g0391341 25.000 176 115 3 67 228 35 207 3.53e-11 63.2
Msa1175140 MtrunA17_Chr7g0269361 26.415 159 110 4 76 231 33 187 8.80e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175140 AT1G53840.1 57.601 592 224 8 1 576 1 581 0.0 673
Msa1175140 AT3G14300.1 49.908 543 251 12 44 574 428 961 8.70e-176 523
Msa1175140 AT3G14300.1 49.231 260 121 7 1 253 1 256 8.17e-62 220
Msa1175140 AT3G14300.1 43.810 210 102 6 35 230 226 433 6.91e-41 159
Msa1175140 AT5G04960.1 46.918 584 272 12 10 580 4 562 4.01e-173 503
Msa1175140 AT3G10710.1 44.792 576 296 10 10 582 5 561 5.73e-170 494
Msa1175140 AT5G53370.1 40.555 577 311 11 21 582 26 585 1.21e-143 428
Msa1175140 AT5G53370.2 40.555 577 311 11 21 582 62 621 3.80e-143 428
Msa1175140 AT3G05610.1 40.388 567 315 12 22 578 8 561 1.02e-141 426
Msa1175140 AT5G27870.1 40.275 581 310 14 10 578 3 558 1.87e-140 425
Msa1175140 AT3G49220.1 41.434 572 301 11 23 578 39 592 9.55e-140 418
Msa1175140 AT3G49220.3 41.084 572 303 10 23 578 84 637 3.16e-139 419
Msa1175140 AT5G49180.1 39.223 566 312 14 33 578 13 566 1.95e-128 389
Msa1175140 AT3G43270.1 42.623 488 257 9 105 578 43 521 5.19e-127 383
Msa1175140 AT2G45220.1 43.555 512 253 13 77 582 30 511 8.70e-127 382
Msa1175140 AT3G05620.1 49.265 408 190 7 176 582 150 541 3.68e-126 382
Msa1175140 AT1G23200.1 41.524 525 264 10 81 576 38 548 1.06e-125 381
Msa1175140 AT1G53830.1 40.325 553 289 11 59 578 39 583 1.06e-124 379
Msa1175140 AT3G14310.1 39.020 551 280 14 71 578 51 588 4.29e-122 373
Msa1175140 AT2G43050.1 42.515 501 251 10 88 579 41 513 8.00e-122 370
Msa1175140 AT1G11580.1 40.777 515 270 11 80 578 58 553 1.57e-119 365
Msa1175140 AT1G11580.2 40.777 515 270 11 80 578 79 574 2.82e-119 365
Msa1175140 AT3G59010.1 41.339 508 268 11 88 582 38 528 6.28e-119 362
Msa1175140 AT5G51490.1 39.072 517 282 12 81 582 38 536 1.10e-117 360
Msa1175140 AT4G33220.1 40.452 487 262 10 112 578 41 519 3.62e-117 358
Msa1175140 AT3G06830.1 37.853 531 294 13 76 582 50 568 8.43e-117 358
Msa1175140 AT4G02330.1 38.959 557 281 15 71 580 25 569 3.75e-115 354
Msa1175140 AT5G51500.1 39.038 520 292 11 74 582 35 540 1.74e-114 352
Msa1175140 AT4G33230.1 39.376 513 281 9 77 571 95 595 3.90e-114 353
Msa1175140 AT3G47400.1 38.314 522 287 12 81 582 88 594 1.69e-113 351
Msa1175140 AT2G26450.1 34.142 618 342 13 6 574 2 603 2.71e-113 351
Msa1175140 AT3G60730.1 39.044 502 279 7 100 582 26 519 6.56e-113 347
Msa1175140 AT4G33220.2 48.657 335 160 4 250 578 70 398 9.03e-112 340
Msa1175140 AT2G26440.1 39.434 530 293 13 70 582 29 547 9.10e-112 345
Msa1175140 AT4G00190.1 39.842 507 254 15 80 578 7 470 2.54e-110 338
Msa1175140 AT1G02810.1 38.156 553 282 18 80 580 31 575 3.37e-107 334
Msa1175140 AT4G02320.1 39.821 447 243 8 148 578 78 514 4.40e-107 332
Msa1175140 AT3G10720.2 37.593 540 284 15 81 578 83 611 4.64e-106 332
Msa1175140 AT5G04970.1 36.872 537 292 14 81 578 88 616 8.57e-105 329
Msa1175140 AT4G02300.1 39.954 438 253 4 148 578 94 528 6.26e-104 324
Msa1175140 AT2G47550.1 40.860 465 240 11 140 578 99 554 5.74e-102 320
Msa1175140 AT3G27980.1 38.865 458 238 8 147 580 56 495 2.86e-97 305
Msa1175140 AT1G11590.1 38.803 451 252 7 137 580 89 522 8.27e-97 305
Msa1175140 AT4G03930.1 37.862 449 263 8 137 582 89 524 1.29e-96 305
Msa1175140 AT5G20860.2 39.374 447 243 10 144 582 112 538 4.67e-96 304
Msa1175140 AT4G15980.1 44.571 350 180 6 240 580 356 700 9.11e-92 297
Msa1175140 AT4G15980.2 44.571 350 180 6 240 580 366 710 2.12e-91 296
Msa1175140 AT4G15980.2 24.402 209 142 7 39 240 19 218 8.91e-11 65.5
Msa1175140 AT3G10720.1 51.751 257 119 3 325 578 1 255 1.21e-88 275
Msa1175140 AT5G09760.1 33.712 528 308 14 67 570 37 546 1.78e-84 274
Msa1175140 AT5G09760.2 33.712 528 308 14 67 570 63 572 2.98e-84 274
Msa1175140 AT2G47030.1 31.848 606 329 17 28 576 4 582 4.65e-81 266
Msa1175140 AT3G62170.1 30.960 604 336 18 28 576 5 582 5.53e-79 260
Msa1175140 AT2G47040.1 31.502 619 321 20 28 576 4 589 4.38e-78 258
Msa1175140 AT5G20860.1 36.620 426 214 9 144 561 112 489 8.76e-77 253
Msa1175140 AT5G64640.1 32.252 524 306 16 77 570 93 597 8.97e-71 239
Msa1175140 AT1G11370.1 46.122 245 123 2 273 511 45 286 1.38e-69 226
Msa1175140 AT5G19730.1 31.858 339 201 10 250 571 56 381 5.40e-49 175
Msa1175140 AT3G29090.1 32.903 310 181 8 276 571 9 305 2.02e-46 166
Msa1175140 AT1G05310.1 33.546 313 176 8 275 571 92 388 1.14e-45 166
Msa1175140 AT3G49220.2 33.237 346 201 9 23 355 84 412 2.65e-45 166
Msa1175140 AT2G36710.1 31.250 304 192 6 280 576 97 390 2.94e-41 154
Msa1175140 AT2G36700.1 31.561 301 190 5 276 571 44 333 2.86e-40 149
Msa1175140 AT1G44980.1 40.526 190 109 2 252 438 54 242 4.08e-38 141
Msa1175140 AT3G17060.1 28.618 304 198 6 275 572 47 337 2.23e-37 142
Msa1175140 AT2G21610.1 28.197 305 199 7 276 578 53 339 1.15e-36 140
Msa1175140 AT2G21610.2 28.197 305 199 7 276 578 58 344 1.44e-36 140
Msa1175140 AT2G19150.1 28.743 334 207 8 253 578 29 339 8.53e-35 134
Msa1175140 AT5G47500.1 25.581 344 216 7 239 571 43 357 2.28e-34 134
Msa1175140 AT5G07430.1 29.605 304 189 7 276 571 69 355 8.50e-34 132
Msa1175140 AT5G26810.1 28.746 327 205 8 260 571 20 333 1.17e-33 131
Msa1175140 AT5G07420.1 28.477 302 197 8 275 571 68 355 2.75e-33 131
Msa1175140 AT5G61680.1 28.863 343 205 12 249 571 35 358 3.28e-33 130
Msa1175140 AT1G69940.1 27.829 327 204 9 258 571 48 355 1.67e-32 129
Msa1175140 AT5G07410.1 27.596 337 207 10 253 571 38 355 1.94e-32 128
Msa1175140 AT5G55590.1 29.450 309 193 7 275 571 83 378 2.37e-31 125
Msa1175140 AT2G47280.1 29.470 302 190 7 279 571 40 327 4.15e-30 121
Msa1175140 AT3G24130.1 29.181 281 175 6 276 544 36 304 6.94e-30 120
Msa1175140 AT5G18990.1 27.566 341 213 9 244 571 4 323 1.10e-29 120
Msa1175140 AT5G55590.2 29.365 252 157 5 275 514 83 325 1.98e-28 116
Msa1175140 AT2G19150.2 29.044 272 166 6 253 516 29 281 4.05e-27 111
Msa1175140 AT3G47670.1 31.518 257 141 7 1 239 37 276 4.08e-25 105
Msa1175140 AT5G51520.1 31.395 172 98 6 75 231 36 202 3.08e-14 72.4
Msa1175140 AT4G25250.1 28.261 184 113 6 64 232 18 197 3.65e-14 72.0
Msa1175140 AT4G25260.1 29.126 206 114 8 36 228 8 194 9.20e-14 70.9
Msa1175140 AT1G62770.1 30.909 165 91 7 81 230 38 194 7.10e-13 68.2
Msa1175140 AT3G62820.1 29.885 174 107 4 70 231 19 189 5.31e-12 65.5

Find 173 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATGATCCTTTCTATTTC+CGG 0.150650 8_1:+6429391 None:intergenic
TTAAAATCTGTTTCATATTC+TGG 0.166717 8_1:+6426424 None:intergenic
TAGGTTGCTTGGAGAGTTTC+CGG 0.225643 8_1:-6428988 Msa1175140:CDS
ACTTGGAATGTGATGATTTA+TGG 0.227869 8_1:-6428762 Msa1175140:CDS
TACAATAAATTTGATGGTAT+TGG 0.238553 8_1:+6426556 None:intergenic
TGGCACTTTATATAGGAATA+TGG 0.245219 8_1:+6430190 None:intergenic
GTTCAAGAATTGTATGTCTT+TGG 0.278605 8_1:+6427236 None:intergenic
ATGTAGTGAAAGTCGATTTC+TGG 0.285836 8_1:+6426926 None:intergenic
GTGTTCATTTGTTGGATATC+AGG 0.290655 8_1:-6427145 Msa1175140:CDS
AATAACAGCTCAGGGTAAAA+AGG 0.296466 8_1:-6426977 Msa1175140:CDS
ACAATAAATTTGATGGTATT+GGG 0.301330 8_1:+6426557 None:intergenic
GAGAGTTTGAAGAGTTGTTC+AGG 0.306883 8_1:+6429700 None:intergenic
ATTATCATGAAATCAGAAAT+TGG 0.311115 8_1:-6426838 Msa1175140:CDS
CCACTCTGGGCCTTGAATAA+AGG 0.319361 8_1:+6426636 None:intergenic
GGCACCATAGATTTCATATT+CGG 0.341649 8_1:-6427069 Msa1175140:CDS
AGTGGACAGTATAAAACAAT+AGG 0.348003 8_1:-6428882 Msa1175140:CDS
ACCTTTGAAACCGCCACTTT+TGG 0.348011 8_1:-6428681 Msa1175140:intron
GGAGTTTGCAAGTAATAGTT+TGG 0.353191 8_1:-6429359 Msa1175140:CDS
CAAGCTGTGGCAATGCGATC+TGG 0.363627 8_1:-6427192 Msa1175140:CDS
ACTGTTGATTCCTTTATTCA+AGG 0.364795 8_1:-6426646 Msa1175140:CDS
TTATGTAGAGAATATTGATT+TGG 0.367915 8_1:-6428793 Msa1175140:CDS
ATCCGGTGGCCGGAATTTCA+TGG 0.372707 8_1:-6428715 Msa1175140:CDS
TTGGCACTGGCACTTTATAT+AGG 0.372874 8_1:+6430183 None:intergenic
CGGTGTTGTGCTTGTGTATG+AGG 0.374216 8_1:+6429863 None:intergenic
TTCTATAGGTGTTCATTTGT+TGG 0.381309 8_1:-6427153 Msa1175140:CDS
GGATCAGTGGTGTTGGAATC+AGG 0.381420 8_1:+6429721 None:intergenic
GTCATCATAGCTGCAGTTGC+AGG 0.381960 8_1:-6429889 Msa1175140:CDS
AGTTTGTGATAATGTTCTTA+AGG 0.386189 8_1:-6429587 Msa1175140:CDS
GAGCTGTTATTGTGTTGAAC+TGG 0.388788 8_1:+6426989 None:intergenic
CAGATCAATCTGTGTTCTAT+AGG 0.388789 8_1:-6427167 Msa1175140:CDS
CCGCGTGTTAAGAAAGCTAT+TGG 0.388883 8_1:-6429610 Msa1175140:CDS
GTGTGCCGTCCATGAAATTC+CGG 0.396082 8_1:+6428706 None:intergenic
TTCTGATTTCATGATAATAG+TGG 0.399437 8_1:+6426843 None:intergenic
GGCGGGTGTTAACGCGGTGT+TGG 0.409388 8_1:+6429813 None:intergenic
TCCGAGGGCGGGCTTATAAC+CGG 0.410743 8_1:+6426690 None:intergenic
CTCCCGGCTACATCTGCTCC+TGG 0.412500 8_1:+6426724 None:intergenic
AATTAGTAGCTAATGTGGTT+TGG 0.421671 8_1:-6426462 Msa1175140:three_prime_UTR
ATGGCTGAGTGCGGCGTTAA+CGG 0.424319 8_1:-6429476 Msa1175140:CDS
TGATAATACAATAAATTTGA+TGG 0.426059 8_1:+6426550 None:intergenic
TTGGTAACTTTGGTTGGCAC+TGG 0.427051 8_1:+6430170 None:intergenic
ATGGAAGAGAAGCATGAGTT+AGG 0.427166 8_1:+6429754 None:intergenic
ATTTCCGAATATGAAATCTA+TGG 0.427383 8_1:+6427065 None:intergenic
GGAGAGTTTCCGGAGTGGTT+GGG 0.432883 8_1:-6428978 Msa1175140:CDS
TTGATTTGGATAAGAATACT+TGG 0.434501 8_1:-6428779 Msa1175140:CDS
AACGGATCATGATACGTGTT+TGG 0.438390 8_1:-6429458 Msa1175140:CDS
TCCTTCGCCACCACCGCATC+CGG 0.439426 8_1:+6428909 None:intergenic
AACCAGTAGGGTGGATAAGT+TGG 0.441447 8_1:-6426804 Msa1175140:CDS
TTGTTACCAATTAGGTTGCT+TGG 0.443221 8_1:-6428999 Msa1175140:intron
GAAGCACTTGGCAACCACTC+TGG 0.446207 8_1:+6426622 None:intergenic
ATGAAATCGTTCAAAGGTTA+CGG 0.452181 8_1:-6430003 Msa1175140:CDS
GTGGACAGTATAAAACAATA+GGG 0.453625 8_1:-6428881 Msa1175140:CDS
GGCACTTTATATAGGAATAT+GGG 0.456880 8_1:+6430191 None:intergenic
TGTAAAATTAGTAGCTAATG+TGG 0.459858 8_1:-6426467 Msa1175140:three_prime_UTR
TTTACAAACCATTCAAAAGC+AGG 0.466536 8_1:+6426484 None:intergenic
TACCGCGACTGTGACATTAC+AGG 0.468298 8_1:-6427090 Msa1175140:CDS
ATTCCGGCCACCGGATATGA+TGG 0.469642 8_1:+6428722 None:intergenic
AGCATCTTCGTCTCCGAGGG+CGG 0.475351 8_1:+6426678 None:intergenic
TGGAGAGTTTCCGGAGTGGT+TGG 0.476876 8_1:-6428979 Msa1175140:CDS
AAGCACTTGGCAACCACTCT+GGG 0.477212 8_1:+6426623 None:intergenic
GAATATCAGAACACTGGGCC+AGG 0.479071 8_1:-6426742 Msa1175140:CDS
TCAATGTCCACGATTGTTGA+TGG 0.481524 8_1:-6429541 Msa1175140:CDS
ATGTAGCCGGGAGAGTCAAA+TGG 0.482183 8_1:-6426714 Msa1175140:CDS
AAGGATCCTAATCAAAACTC+TGG 0.484289 8_1:-6426958 Msa1175140:CDS
GGAATCAGGAAGAGAAGAGA+TGG 0.484549 8_1:+6429735 None:intergenic
ATGTAAACACTTACCAAAAG+TGG 0.487046 8_1:+6428668 None:intergenic
GGGCCAGGAGCAGATGTAGC+CGG 0.488515 8_1:-6426727 Msa1175140:CDS
GTTCAACACAATAACAGCTC+AGG 0.490740 8_1:-6426986 Msa1175140:CDS
GGCGGCGCGTGGTGTTATAC+CGG 0.493141 8_1:-6429410 Msa1175140:CDS
TAATGTTCTTAAGGATTCGT+TGG 0.494726 8_1:-6429578 Msa1175140:CDS
AGTAATGTATTAAAATCAAA+TGG 0.495086 8_1:+6426582 None:intergenic
GGCCAGGAGCAGATGTAGCC+GGG 0.497058 8_1:-6426726 Msa1175140:CDS
TGGTTTGACATAGGCTGTCT+AGG 0.497792 8_1:+6427009 None:intergenic
AATATAAGTTACAACTTACA+AGG 0.501592 8_1:+6426524 None:intergenic
TTGTGGTGTATGTGAAGAAA+GGG 0.502606 8_1:-6428818 Msa1175140:CDS
GAAGAGTCTTCAGAGATTTG+TGG 0.506531 8_1:-6428835 Msa1175140:CDS
GATGCGGTGGTGGCGAAGGA+TGG 0.506628 8_1:-6428906 Msa1175140:CDS
GCATCTTCGTCTCCGAGGGC+GGG 0.507008 8_1:+6426679 None:intergenic
ACCAAAAGTGGCGGTTTCAA+AGG 0.507223 8_1:+6428680 None:intergenic
GAAGCGCGTGAGAGAAAGCT+TGG 0.509082 8_1:+6429651 None:intergenic
ACCAGTAGGGTGGATAAGTT+GGG 0.511447 8_1:-6426803 Msa1175140:CDS
GACAATGCCGGATGCGGTGG+TGG 0.514269 8_1:-6428916 Msa1175140:CDS
TCGACTTTCACTACATTACC+TGG 0.520139 8_1:-6426919 Msa1175140:CDS
GCCGGATGCGGTGGTGGCGA+AGG 0.521658 8_1:-6428910 Msa1175140:CDS
ATGACGGAAACCATCATATC+CGG 0.524328 8_1:-6428732 Msa1175140:CDS
TTCTTAAGGATTCGTTGGAT+CGG 0.524960 8_1:-6429573 Msa1175140:CDS
GTCCATGAAATTCCGGCCAC+CGG 0.529356 8_1:+6428713 None:intergenic
GATAAGTTGGGTTGCTAATG+TGG 0.531869 8_1:-6426791 Msa1175140:CDS
GATGACTGCTACTAGAATGA+TGG 0.531890 8_1:+6429906 None:intergenic
TCAGCATAGAGGATGCTACT+TGG 0.534467 8_1:+6426763 None:intergenic
GAGGAGGCTGCTTGCGACGG+TGG 0.534910 8_1:-6428946 Msa1175140:CDS
TTTGCAGCTGTTAAAGGCAA+GGG 0.535471 8_1:-6427267 Msa1175140:intron
AATAGGGGAGGCATTGAAGT+TGG 0.537373 8_1:-6428865 Msa1175140:CDS
TGGTGGAAAGATGCTTTCTC+CGG 0.537494 8_1:-6429521 Msa1175140:CDS
GACAGCATCTTCGTCTCCGA+GGG 0.537918 8_1:+6426675 None:intergenic
TTGTTCAGGATCAGTGGTGT+TGG 0.540839 8_1:+6429714 None:intergenic
CAGATCGCATTGCCACAGCT+TGG 0.541260 8_1:+6427193 None:intergenic
TGTAGCCGGGAGAGTCAAAT+GGG 0.545755 8_1:-6426713 Msa1175140:CDS
ACCCAACTTATCCACCCTAC+TGG 0.546421 8_1:+6426802 None:intergenic
GTGTTATACCGGAAATAGAA+AGG 0.552581 8_1:-6429399 Msa1175140:CDS
AACTGCTTTGAGTGAGGTGG+CGG 0.552745 8_1:+6429795 None:intergenic
GTTAACTCCACGGCGGCGCG+TGG 0.552905 8_1:-6429421 Msa1175140:CDS
ACCGGCCCATTTGACTCTCC+CGG 0.556258 8_1:+6426708 None:intergenic
GCCGGGAGAGTCAAATGGGC+CGG 0.556331 8_1:-6426709 Msa1175140:CDS
GTTTCCGGAGTGGTTGGGAA+CGG 0.558186 8_1:-6428973 Msa1175140:CDS
GAAGAGTTGTTCAGGATCAG+TGG 0.558403 8_1:+6429708 None:intergenic
TGATTTCATGATAATAGTGG+TGG 0.558982 8_1:+6426846 None:intergenic
ATACAATTCTTGAACACTGC+AGG 0.561805 8_1:-6427228 Msa1175140:CDS
GCATAGAGGATGCTACTTGG+AGG 0.563654 8_1:+6426766 None:intergenic
AGAGAGGAGGCTGCTTGCGA+CGG 0.566296 8_1:-6428949 Msa1175140:CDS
TTTGTGGTGTATGTGAAGAA+AGG 0.567898 8_1:-6428819 Msa1175140:CDS
CATGGCCTACCAAGGTAAGT+AGG 0.568985 8_1:+6426880 None:intergenic
GTGTTGAACTGGTTTGACAT+AGG 0.570228 8_1:+6427000 None:intergenic
TAGCACCTACTTACCTTGGT+AGG 0.570638 8_1:-6426885 Msa1175140:CDS
CTCGTAGCACCTACTTACCT+TGG 0.571602 8_1:-6426889 Msa1175140:CDS
TCCGGCGAAGATTCGTGATG+TGG 0.571876 8_1:-6429503 Msa1175140:CDS
TATGCTGAATATCAGAACAC+TGG 0.572733 8_1:-6426748 Msa1175140:CDS
AAACATAACAACAACAACAA+TGG 0.574369 8_1:-6430031 Msa1175140:exon
AAGCTTGGAGAGTTCATCAA+TGG 0.575324 8_1:+6429666 None:intergenic
TAGTTTGGCCATTGTGACCA+AGG 0.576764 8_1:-6429344 Msa1175140:CDS
GATACTATGAAATCGTTCAA+AGG 0.578972 8_1:-6430009 Msa1175140:CDS
AAGTTTCAAATCATCACCGC+AGG 0.580736 8_1:-6429297 Msa1175140:intron
TTTCTTAACACGCGGATCAG+TGG 0.582482 8_1:+6429618 None:intergenic
TGTGGTGTATGTGAAGAAAG+GGG 0.583059 8_1:-6428817 Msa1175140:CDS
AAAGTGGCGGTTTCAAAGGT+AGG 0.583507 8_1:+6428684 None:intergenic
GATTTATGGTGATGGTATGA+CGG 0.589184 8_1:-6428748 Msa1175140:CDS
AAACCATCATATCCGGTGGC+CGG 0.589206 8_1:-6428725 Msa1175140:CDS
TCAAACTGCACAGAAGCACT+TGG 0.594753 8_1:+6426610 None:intergenic
AAGGATCATGAGAAACTCTA+CGG 0.597349 8_1:-6429380 Msa1175140:CDS
GGCTCATTCTTGAAACCAGT+AGG 0.599887 8_1:-6426817 Msa1175140:CDS
GTGGTGGCGAAGGATGGAAG+TGG 0.601047 8_1:-6428900 Msa1175140:CDS
TCCACATCACGAATCTTCGC+CGG 0.602169 8_1:+6429502 None:intergenic
CTACTTACCTTGGTAGGCCA+TGG 0.602529 8_1:-6426879 Msa1175140:CDS
CCAATAGCTTTCTTAACACG+CGG 0.602922 8_1:+6429610 None:intergenic
GAATGAGACAATGCCGGATG+CGG 0.604069 8_1:-6428922 Msa1175140:CDS
GCTCATTCTTGAAACCAGTA+GGG 0.607042 8_1:-6426816 Msa1175140:CDS
GGTTGGGAACGGCAGAGAGG+AGG 0.607603 8_1:-6428962 Msa1175140:CDS
TGTTCTGATATTCAGCATAG+AGG 0.608026 8_1:+6426752 None:intergenic
AATGTGATGATTTATGGTGA+TGG 0.611681 8_1:-6428756 Msa1175140:CDS
TGAGACAATGCCGGATGCGG+TGG 0.613283 8_1:-6428919 Msa1175140:CDS
TGCATCTAAGCACCAAGCTG+TGG 0.614107 8_1:-6427205 Msa1175140:CDS
TTCAACACAATAACAGCTCA+GGG 0.615181 8_1:-6426985 Msa1175140:CDS
TCTGCCGTTCCCAACCACTC+CGG 0.617146 8_1:+6428969 None:intergenic
GATACGTGTTTGGATGCTGT+TGG 0.618654 8_1:-6429448 Msa1175140:CDS
ATGCTGAATATCAGAACACT+GGG 0.621463 8_1:-6426747 Msa1175140:CDS
ATGTCCACGATTGTTGATGG+TGG 0.623646 8_1:-6429538 Msa1175140:CDS
TGACAGCATCTTCGTCTCCG+AGG 0.624270 8_1:+6426674 None:intergenic
TGACAACAATCTGATCACCT+TGG 0.626447 8_1:+6429327 None:intergenic
TCTGATCACCTTGGTCACAA+TGG 0.627404 8_1:+6429336 None:intergenic
ACAAACTGCTTTGAGTGAGG+TGG 0.630712 8_1:+6429792 None:intergenic
AATCTTTCCATGGCCTACCA+AGG 0.631606 8_1:+6426872 None:intergenic
CTCACAAACTGCTTTGAGTG+AGG 0.635286 8_1:+6429789 None:intergenic
CCTTTATTCAAGGCCCAGAG+TGG 0.638103 8_1:-6426636 Msa1175140:CDS
ACTGCTTTGAGTGAGGTGGC+GGG 0.641003 8_1:+6429796 None:intergenic
CATTCTTGAAACCAGTAGGG+TGG 0.644270 8_1:-6426813 Msa1175140:CDS
GTGGTGGAGAAATCTTTCCA+TGG 0.646483 8_1:+6426862 None:intergenic
CTTTCCACCATCAACAATCG+TGG 0.646692 8_1:+6429534 None:intergenic
TAAACACTTACCAAAAGTGG+CGG 0.649335 8_1:+6428671 None:intergenic
TGCTTGGAGAGTTTCCGGAG+TGG 0.655943 8_1:-6428983 Msa1175140:CDS
GACTGCTACTAGAATGATGG+AGG 0.660015 8_1:+6429909 None:intergenic
ACAGTATAAAACAATAGGGG+AGG 0.661388 8_1:-6428877 Msa1175140:CDS
TGTTGGTGAAGTTAACTCCA+CGG 0.663568 8_1:-6429431 Msa1175140:CDS
AGATTCGTGATGTGGAGACA+TGG 0.664798 8_1:-6429495 Msa1175140:CDS
GGTGGCCGGAATTTCATGGA+CGG 0.666841 8_1:-6428711 Msa1175140:CDS
TGAGGTGGCGGGTGTTAACG+CGG 0.667691 8_1:+6429807 None:intergenic
TGTGGAGACATGGCTGAGTG+CGG 0.667879 8_1:-6429485 Msa1175140:CDS
TGGACAGTATAAAACAATAG+GGG 0.675964 8_1:-6428880 Msa1175140:CDS
ACGGAAACCATCATATCCGG+TGG 0.676879 8_1:-6428729 Msa1175140:CDS
GGTGGTGAATGAGACAATGC+CGG 0.681646 8_1:-6428928 Msa1175140:CDS
AGTGGTTGGGAACGGCAGAG+AGG 0.688161 8_1:-6428965 Msa1175140:CDS
ATATAAGTTACAACTTACAA+GGG 0.691280 8_1:+6426525 None:intergenic
TGCCTGTAATGTCACAGTCG+CGG 0.702731 8_1:+6427088 None:intergenic
GGTGCTACGAGATTGTCACC+AGG 0.717516 8_1:+6426901 None:intergenic
TGGTGAAGTTAACTCCACGG+CGG 0.823111 8_1:-6429428 Msa1175140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAGAGTTTATAAGTTAT+TGG - chr8_1:6428197-6428216 Msa1175140:intron 15.0%
!! AGTAATGTATTAAAATCAAA+TGG + chr8_1:6430005-6430024 None:intergenic 15.0%
!! TGATAATACAATAAATTTGA+TGG + chr8_1:6430037-6430056 None:intergenic 15.0%
!!! TTTTTAGGTTAGGATATAAA+TGG + chr8_1:6426349-6426368 None:intergenic 20.0%
!!! ATAAGTAGAGAACTTTTTTT+AGG + chr8_1:6426364-6426383 None:intergenic 20.0%
!!! TTGTTTTGTTTATAGGTTTT+TGG + chr8_1:6426436-6426455 None:intergenic 20.0%
!!! TAACAATGTATGTTTTTTTG+AGG + chr8_1:6426498-6426517 None:intergenic 20.0%
!!! TTATGTAGAGAATATTGATT+TGG - chr8_1:6427791-6427810 Msa1175140:intron 20.0%
!! AAAATAACCAAATCAATAGA+AGG + chr8_1:6428010-6428029 None:intergenic 20.0%
!! ATGAATTTGTAATAAATCCA+GGG + chr8_1:6428229-6428248 None:intergenic 20.0%
!! AATGAATTTGTAATAAATCC+AGG + chr8_1:6428230-6428249 None:intergenic 20.0%
!! TGATAGGTTTAATATATGTT+TGG - chr8_1:6428364-6428383 Msa1175140:intron 20.0%
!! TTGACTATGAATAAGATATT+TGG - chr8_1:6428744-6428763 Msa1175140:CDS 20.0%
!! TATGAATAAGATATTTGGTT+TGG - chr8_1:6428749-6428768 Msa1175140:CDS 20.0%
!! ATAGTTTCAAACAAAAGAAA+AGG + chr8_1:6429080-6429099 None:intergenic 20.0%
!! TAACATTAGAAAACATTTGT+AGG + chr8_1:6429119-6429138 None:intergenic 20.0%
!! ATTATCATGAAATCAGAAAT+TGG - chr8_1:6429746-6429765 Msa1175140:CDS 20.0%
!!! ACAATAAATTTGATGGTATT+GGG + chr8_1:6430030-6430049 None:intergenic 20.0%
!!! TACAATAAATTTGATGGTAT+TGG + chr8_1:6430031-6430050 None:intergenic 20.0%
!! ATATAAGTTACAACTTACAA+GGG + chr8_1:6430062-6430081 None:intergenic 20.0%
!! AATATAAGTTACAACTTACA+AGG + chr8_1:6430063-6430082 None:intergenic 20.0%
!! TTAAAATCTGTTTCATATTC+TGG + chr8_1:6430163-6430182 None:intergenic 20.0%
!!! TAGAGAACTTTTTTTAGGTT+AGG + chr8_1:6426359-6426378 None:intergenic 25.0%
!!! TTATAGGTTTTTGGTAACTT+TGG + chr8_1:6426427-6426446 None:intergenic 25.0%
! AAACATAACAACAACAACAA+TGG - chr8_1:6426553-6426572 Msa1175140:three_prime_UTR 25.0%
!! AGTTTGTGATAATGTTCTTA+AGG - chr8_1:6426997-6427016 Msa1175140:CDS 25.0%
! GCATTGTTGTATACTAATTA+TGG - chr8_1:6427559-6427578 Msa1175140:intron 25.0%
! TATGGTTATTGTTACCAATT+AGG - chr8_1:6427577-6427596 Msa1175140:intron 25.0%
!!! TTGATTTGGATAAGAATACT+TGG - chr8_1:6427805-6427824 Msa1175140:intron 25.0%
!!! GCTTAATTTTTAGTGTGAAT+CGG + chr8_1:6427975-6427994 None:intergenic 25.0%
!! TGTAATTCCTTCTATTGATT+TGG - chr8_1:6428000-6428019 Msa1175140:intron 25.0%
! ATAATTGAACAAGAGGATAT+GGG - chr8_1:6428319-6428338 Msa1175140:intron 25.0%
!!! ACTTGCTTGTTATATTATCA+TGG - chr8_1:6428549-6428568 Msa1175140:intron 25.0%
!!! CTTGCTTGTTATATTATCAT+GGG - chr8_1:6428550-6428569 Msa1175140:intron 25.0%
! TCTAAACACATATTATCATG+TGG - chr8_1:6428575-6428594 Msa1175140:intron 25.0%
!!! AAATGTCTTTTTTTGTGTCT+GGG - chr8_1:6428618-6428637 Msa1175140:intron 25.0%
! AAAACATCAATGATTATAGG+TGG + chr8_1:6428726-6428745 None:intergenic 25.0%
! GTCAAAACATCAATGATTAT+AGG + chr8_1:6428729-6428748 None:intergenic 25.0%
! ATGTACATTACATTCATATG+TGG + chr8_1:6428907-6428926 None:intergenic 25.0%
! ATATGAATGTAATGTACATC+TGG - chr8_1:6428908-6428927 Msa1175140:CDS 25.0%
! GTCAATCAAAACATTAAACA+TGG - chr8_1:6429034-6429053 Msa1175140:intron 25.0%
!!! TAAACATGGTTTTGTGTTTT+AGG - chr8_1:6429048-6429067 Msa1175140:intron 25.0%
! TATAATTTAATCGCATCTGA+AGG + chr8_1:6429202-6429221 None:intergenic 25.0%
! CATATAGTACATATGCTATA+TGG + chr8_1:6429238-6429257 None:intergenic 25.0%
! ATTTCCGAATATGAAATCTA+TGG + chr8_1:6429522-6429541 None:intergenic 25.0%
! TTCTGATTTCATGATAATAG+TGG + chr8_1:6429744-6429763 None:intergenic 25.0%
! TGTAAAATTAGTAGCTAATG+TGG - chr8_1:6430117-6430136 Msa1175140:five_prime_UTR 25.0%
!!! CAGATTTTAAAAGACTAGTT+TGG - chr8_1:6430173-6430192 Msa1175140:five_prime_UTR 25.0%
GGCACTTTATATAGGAATAT+GGG + chr8_1:6426396-6426415 None:intergenic 30.0%
TGGCACTTTATATAGGAATA+TGG + chr8_1:6426397-6426416 None:intergenic 30.0%
!!! GCTGTTGTTGTTTTGTTTAT+AGG + chr8_1:6426443-6426462 None:intergenic 30.0%
!!! TTCTGTCTTTTTTTTCACTG+TGG - chr8_1:6426524-6426543 Msa1175140:three_prime_UTR 30.0%
GATACTATGAAATCGTTCAA+AGG - chr8_1:6426575-6426594 Msa1175140:three_prime_UTR 30.0%
ATGAAATCGTTCAAAGGTTA+CGG - chr8_1:6426581-6426600 Msa1175140:exon 30.0%
TAATGTTCTTAAGGATTCGT+TGG - chr8_1:6427006-6427025 Msa1175140:CDS 30.0%
ACTATTACATCAATTACCTG+CGG + chr8_1:6427306-6427325 None:intergenic 30.0%
ATTATATGTGTGTGTCGTAT+CGG + chr8_1:6427431-6427450 None:intergenic 30.0%
AGTGGACAGTATAAAACAAT+AGG - chr8_1:6427702-6427721 Msa1175140:intron 30.0%
GTGGACAGTATAAAACAATA+GGG - chr8_1:6427703-6427722 Msa1175140:intron 30.0%
TGGACAGTATAAAACAATAG+GGG - chr8_1:6427704-6427723 Msa1175140:intron 30.0%
ACTTGGAATGTGATGATTTA+TGG - chr8_1:6427822-6427841 Msa1175140:intron 30.0%
AATGTGATGATTTATGGTGA+TGG - chr8_1:6427828-6427847 Msa1175140:intron 30.0%
ATGTAAACACTTACCAAAAG+TGG + chr8_1:6427919-6427938 None:intergenic 30.0%
AATTTGTAATAAATCCAGGG+CGG + chr8_1:6428226-6428245 None:intergenic 30.0%
CTTACAGATAATTGAACAAG+AGG - chr8_1:6428312-6428331 Msa1175140:intron 30.0%
GATAATTGAACAAGAGGATA+TGG - chr8_1:6428318-6428337 Msa1175140:intron 30.0%
! AACTTTTGTCAAACTCACAA+CGG + chr8_1:6428422-6428441 None:intergenic 30.0%
! TGAATTCATGGTGATTTTGT+TGG + chr8_1:6428447-6428466 None:intergenic 30.0%
! TGATGAATTTGGTGAATTCA+TGG + chr8_1:6428459-6428478 None:intergenic 30.0%
!! GTCTAGATTGATGATGAATT+TGG + chr8_1:6428470-6428489 None:intergenic 30.0%
TAGTTTGGATTTGTACATGA+TGG - chr8_1:6428502-6428521 Msa1175140:intron 30.0%
AGTTTGGATTTGTACATGAT+GGG - chr8_1:6428503-6428522 Msa1175140:intron 30.0%
!!! GAAATGTCTTTTTTTGTGTC+TGG - chr8_1:6428617-6428636 Msa1175140:intron 30.0%
ACTATAACATGTATCCACAT+GGG + chr8_1:6428806-6428825 None:intergenic 30.0%
AACTATAACATGTATCCACA+TGG + chr8_1:6428807-6428826 None:intergenic 30.0%
! AGGTGACACTATGATATTTT+TGG - chr8_1:6428956-6428975 Msa1175140:CDS 30.0%
! AGTTTTTGTCAATATCACAG+TGG - chr8_1:6428992-6429011 Msa1175140:intron 30.0%
!!! TGATTTTTTGCAGCTGTTAA+AGG - chr8_1:6429311-6429330 Msa1175140:CDS 30.0%
GTTCAAGAATTGTATGTCTT+TGG + chr8_1:6429351-6429370 None:intergenic 30.0%
TTCTATAGGTGTTCATTTGT+TGG - chr8_1:6429431-6429450 Msa1175140:CDS 30.0%
! TAGGCATGATTTTGCAATTT+TGG + chr8_1:6429559-6429578 None:intergenic 30.0%
!!! ACAATTCCAGAGTTTTGATT+AGG + chr8_1:6429635-6429654 None:intergenic 30.0%
TGATTTCATGATAATAGTGG+TGG + chr8_1:6429741-6429760 None:intergenic 30.0%
!! ACTGTTGATTCCTTTATTCA+AGG - chr8_1:6429938-6429957 Msa1175140:CDS 30.0%
!!! TTTTTTGACCTGCTTTTGAA+TGG - chr8_1:6430092-6430111 Msa1175140:five_prime_UTR 30.0%
TTTACAAACCATTCAAAAGC+AGG + chr8_1:6430103-6430122 None:intergenic 30.0%
AATTAGTAGCTAATGTGGTT+TGG - chr8_1:6430122-6430141 Msa1175140:five_prime_UTR 30.0%
!!! AGGTTTTTGGTAACTTTGGT+TGG + chr8_1:6426423-6426442 None:intergenic 35.0%
!!! TGCGTTTACGTGTCTTTTTT+TGG + chr8_1:6426637-6426656 None:intergenic 35.0%
TTCTTAAGGATTCGTTGGAT+CGG - chr8_1:6427011-6427030 Msa1175140:CDS 35.0%
GTGTTATACCGGAAATAGAA+AGG - chr8_1:6427185-6427204 Msa1175140:CDS 35.0%
CTCATGATCCTTTCTATTTC+CGG + chr8_1:6427196-6427215 None:intergenic 35.0%
AAGGATCATGAGAAACTCTA+CGG - chr8_1:6427204-6427223 Msa1175140:CDS 35.0%
GGAGTTTGCAAGTAATAGTT+TGG - chr8_1:6427225-6427244 Msa1175140:CDS 35.0%
ACTGCACTTATTAGATTGCT+CGG - chr8_1:6427337-6427356 Msa1175140:intron 35.0%
! TTGTTACCAATTAGGTTGCT+TGG - chr8_1:6427585-6427604 Msa1175140:intron 35.0%
ACAGTATAAAACAATAGGGG+AGG - chr8_1:6427707-6427726 Msa1175140:intron 35.0%
TTTGTGGTGTATGTGAAGAA+AGG - chr8_1:6427765-6427784 Msa1175140:intron 35.0%
TTGTGGTGTATGTGAAGAAA+GGG - chr8_1:6427766-6427785 Msa1175140:intron 35.0%
!! GATTTATGGTGATGGTATGA+CGG - chr8_1:6427836-6427855 Msa1175140:intron 35.0%
TAAACACTTACCAAAAGTGG+CGG + chr8_1:6427916-6427935 None:intergenic 35.0%
ACACAGCTAAATTCATTGCA+GGG + chr8_1:6428071-6428090 None:intergenic 35.0%
TGTGTGCTAGATGTGATTTA+TGG - chr8_1:6428086-6428105 Msa1175140:intron 35.0%
ATGTTCAAGTGTGTGATGAT+AGG - chr8_1:6428348-6428367 Msa1175140:intron 35.0%
GACATACACTTAGCTTAGTT+TGG - chr8_1:6428487-6428506 Msa1175140:intron 35.0%
ACATATTATCATGTGGCATG+TGG - chr8_1:6428582-6428601 Msa1175140:intron 35.0%
GTAATGTACATCTGGATTTG+CGG - chr8_1:6428916-6428935 Msa1175140:CDS 35.0%
! TTTTGTCAATATCACAGTGG+CGG - chr8_1:6428995-6429014 Msa1175140:intron 35.0%
ATACAATTCTTGAACACTGC+AGG - chr8_1:6429356-6429375 Msa1175140:CDS 35.0%
CAGATCAATCTGTGTTCTAT+AGG - chr8_1:6429417-6429436 Msa1175140:CDS 35.0%
! GTGTTCATTTGTTGGATATC+AGG - chr8_1:6429439-6429458 Msa1175140:CDS 35.0%
GGCACCATAGATTTCATATT+CGG - chr8_1:6429515-6429534 Msa1175140:CDS 35.0%
TTCAACACAATAACAGCTCA+GGG - chr8_1:6429599-6429618 Msa1175140:CDS 35.0%
AATAACAGCTCAGGGTAAAA+AGG - chr8_1:6429607-6429626 Msa1175140:CDS 35.0%
AAGGATCCTAATCAAAACTC+TGG - chr8_1:6429626-6429645 Msa1175140:CDS 35.0%
! ATGTAGTGAAAGTCGATTTC+TGG + chr8_1:6429661-6429680 None:intergenic 35.0%
TGTTCTGATATTCAGCATAG+AGG + chr8_1:6429835-6429854 None:intergenic 35.0%
TATGCTGAATATCAGAACAC+TGG - chr8_1:6429836-6429855 Msa1175140:CDS 35.0%
ATGCTGAATATCAGAACACT+GGG - chr8_1:6429837-6429856 Msa1175140:CDS 35.0%
!! TTGGCACTGGCACTTTATAT+AGG + chr8_1:6426404-6426423 None:intergenic 40.0%
GATGACTGCTACTAGAATGA+TGG + chr8_1:6426681-6426700 None:intergenic 40.0%
! GTTTTGTGAGGAAGAGGATT+CGG + chr8_1:6426744-6426763 None:intergenic 40.0%
! ATGGAAGAGAAGCATGAGTT+AGG + chr8_1:6426833-6426852 None:intergenic 40.0%
GAGAGTTTGAAGAGTTGTTC+AGG + chr8_1:6426887-6426906 None:intergenic 40.0%
AAGCTTGGAGAGTTCATCAA+TGG + chr8_1:6426921-6426940 None:intergenic 40.0%
CCAATAGCTTTCTTAACACG+CGG + chr8_1:6426977-6426996 None:intergenic 40.0%
TCAATGTCCACGATTGTTGA+TGG - chr8_1:6427043-6427062 Msa1175140:CDS 40.0%
AACGGATCATGATACGTGTT+TGG - chr8_1:6427126-6427145 Msa1175140:CDS 40.0%
! TGTTGGTGAAGTTAACTCCA+CGG - chr8_1:6427153-6427172 Msa1175140:CDS 40.0%
TGACAACAATCTGATCACCT+TGG + chr8_1:6427260-6427279 None:intergenic 40.0%
AAGTTTCAAATCATCACCGC+AGG - chr8_1:6427287-6427306 Msa1175140:intron 40.0%
TATGAAACACGAACACTCCT+CGG - chr8_1:6427365-6427384 Msa1175140:intron 40.0%
CAGTATCCATGCTTCATAGT+CGG - chr8_1:6427499-6427518 Msa1175140:intron 40.0%
AACTCTCCAAGCAACCTAAT+TGG + chr8_1:6427594-6427613 None:intergenic 40.0%
GAAGAGTCTTCAGAGATTTG+TGG - chr8_1:6427749-6427768 Msa1175140:intron 40.0%
TGTGGTGTATGTGAAGAAAG+GGG - chr8_1:6427767-6427786 Msa1175140:intron 40.0%
! ATGACGGAAACCATCATATC+CGG - chr8_1:6427852-6427871 Msa1175140:intron 40.0%
CACACAGCTAAATTCATTGC+AGG + chr8_1:6428072-6428091 None:intergenic 40.0%
! TTGGATTTGTACATGATGGG+AGG - chr8_1:6428506-6428525 Msa1175140:intron 40.0%
! CATGATGGGAGGAAATTGTT+AGG - chr8_1:6428517-6428536 Msa1175140:intron 40.0%
! TTTTGTGTCTGGGAATCACA+TGG - chr8_1:6428628-6428647 Msa1175140:intron 40.0%
! GGGACAGACAACAAATTTTG+TGG + chr8_1:6428686-6428705 None:intergenic 40.0%
ATAACATGTATCCACATGGG+AGG + chr8_1:6428803-6428822 None:intergenic 40.0%
! TCTAAACATGCACTGATACG+TGG + chr8_1:6428862-6428881 None:intergenic 40.0%
CGGCGAGTTTAGTAAAATCA+AGG - chr8_1:6428936-6428955 Msa1175140:CDS 40.0%
TGCTATATGGTGTGCAATGT+GGG + chr8_1:6429225-6429244 None:intergenic 40.0%
ATGCTATATGGTGTGCAATG+TGG + chr8_1:6429226-6429245 None:intergenic 40.0%
! TTTTGCAGCTGTTAAAGGCA+AGG - chr8_1:6429316-6429335 Msa1175140:CDS 40.0%
TTTGCAGCTGTTAAAGGCAA+GGG - chr8_1:6429317-6429336 Msa1175140:CDS 40.0%
!! GTGTTGAACTGGTTTGACAT+AGG + chr8_1:6429587-6429606 None:intergenic 40.0%
GAGCTGTTATTGTGTTGAAC+TGG + chr8_1:6429598-6429617 None:intergenic 40.0%
GTTCAACACAATAACAGCTC+AGG - chr8_1:6429598-6429617 Msa1175140:CDS 40.0%
TCGACTTTCACTACATTACC+TGG - chr8_1:6429665-6429684 Msa1175140:CDS 40.0%
GCTCATTCTTGAAACCAGTA+GGG - chr8_1:6429768-6429787 Msa1175140:CDS 40.0%
! GATAAGTTGGGTTGCTAATG+TGG - chr8_1:6429793-6429812 Msa1175140:CDS 40.0%
! TTGGTAACTTTGGTTGGCAC+TGG + chr8_1:6426417-6426436 None:intergenic 45.0%
GACTGCTACTAGAATGATGG+AGG + chr8_1:6426678-6426697 None:intergenic 45.0%
!! GAGTGAGTTTTGTGAGGAAG+AGG + chr8_1:6426750-6426769 None:intergenic 45.0%
! ACAAACTGCTTTGAGTGAGG+TGG + chr8_1:6426795-6426814 None:intergenic 45.0%
! CTCACAAACTGCTTTGAGTG+AGG + chr8_1:6426798-6426817 None:intergenic 45.0%
GGAATCAGGAAGAGAAGAGA+TGG + chr8_1:6426852-6426871 None:intergenic 45.0%
TTGTTCAGGATCAGTGGTGT+TGG + chr8_1:6426873-6426892 None:intergenic 45.0%
GAAGAGTTGTTCAGGATCAG+TGG + chr8_1:6426879-6426898 None:intergenic 45.0%
TTTCTTAACACGCGGATCAG+TGG + chr8_1:6426969-6426988 None:intergenic 45.0%
CCGCGTGTTAAGAAAGCTAT+TGG - chr8_1:6426974-6426993 Msa1175140:CDS 45.0%
! ATGTCCACGATTGTTGATGG+TGG - chr8_1:6427046-6427065 Msa1175140:CDS 45.0%
CTTTCCACCATCAACAATCG+TGG + chr8_1:6427053-6427072 None:intergenic 45.0%
TGGTGGAAAGATGCTTTCTC+CGG - chr8_1:6427063-6427082 Msa1175140:CDS 45.0%
AGATTCGTGATGTGGAGACA+TGG - chr8_1:6427089-6427108 Msa1175140:CDS 45.0%
GATACGTGTTTGGATGCTGT+TGG - chr8_1:6427136-6427155 Msa1175140:CDS 45.0%
TAGTTTGGCCATTGTGACCA+AGG - chr8_1:6427240-6427259 Msa1175140:CDS 45.0%
TCTGATCACCTTGGTCACAA+TGG + chr8_1:6427251-6427270 None:intergenic 45.0%
TACTCTCCGACTATGAAGCA+TGG + chr8_1:6427508-6427527 None:intergenic 45.0%
TAGGTTGCTTGGAGAGTTTC+CGG - chr8_1:6427596-6427615 Msa1175140:intron 45.0%
!! AATAGGGGAGGCATTGAAGT+TGG - chr8_1:6427719-6427738 Msa1175140:intron 45.0%
AAAGTGGCGGTTTCAAAGGT+AGG + chr8_1:6427903-6427922 None:intergenic 45.0%
!!! ACCTTTGAAACCGCCACTTT+TGG - chr8_1:6427903-6427922 Msa1175140:intron 45.0%
ACCAAAAGTGGCGGTTTCAA+AGG + chr8_1:6427907-6427926 None:intergenic 45.0%
TCATGTGGCATGTGGTTTAG+TGG - chr8_1:6428590-6428609 Msa1175140:intron 45.0%
CATGTGGCATGTGGTTTAGT+GGG - chr8_1:6428591-6428610 Msa1175140:intron 45.0%
TGTGAGCTTGATCTGATAGC+AGG - chr8_1:6428659-6428678 Msa1175140:intron 45.0%
TGGCTCAGAAAACGAAAGAG+GGG + chr8_1:6428706-6428725 None:intergenic 45.0%
GTGGCTCAGAAAACGAAAGA+GGG + chr8_1:6428707-6428726 None:intergenic 45.0%
! AACATGCACTGATACGTGGA+TGG + chr8_1:6428858-6428877 None:intergenic 45.0%
!!! GCAATTTTGGAACACAGCAG+CGG + chr8_1:6429546-6429565 None:intergenic 45.0%
TGGTTTGACATAGGCTGTCT+AGG + chr8_1:6429578-6429597 None:intergenic 45.0%
TAGCACCTACTTACCTTGGT+AGG - chr8_1:6429699-6429718 Msa1175140:CDS 45.0%
AATCTTTCCATGGCCTACCA+AGG + chr8_1:6429715-6429734 None:intergenic 45.0%
! GTGGTGGAGAAATCTTTCCA+TGG + chr8_1:6429725-6429744 None:intergenic 45.0%
GGCTCATTCTTGAAACCAGT+AGG - chr8_1:6429767-6429786 Msa1175140:CDS 45.0%
CATTCTTGAAACCAGTAGGG+TGG - chr8_1:6429771-6429790 Msa1175140:CDS 45.0%
AACCAGTAGGGTGGATAAGT+TGG - chr8_1:6429780-6429799 Msa1175140:CDS 45.0%
ACCAGTAGGGTGGATAAGTT+GGG - chr8_1:6429781-6429800 Msa1175140:CDS 45.0%
TCAGCATAGAGGATGCTACT+TGG + chr8_1:6429824-6429843 None:intergenic 45.0%
!! TCAAACTGCACAGAAGCACT+TGG + chr8_1:6429977-6429996 None:intergenic 45.0%
GTCATCATAGCTGCAGTTGC+AGG - chr8_1:6426695-6426714 Msa1175140:CDS 50.0%
!! CGGTGTTGTGCTTGTGTATG+AGG + chr8_1:6426724-6426743 None:intergenic 50.0%
!! GTTGGGGAGTGAGTTTTGTG+AGG + chr8_1:6426756-6426775 None:intergenic 50.0%
! AACTGCTTTGAGTGAGGTGG+CGG + chr8_1:6426792-6426811 None:intergenic 50.0%
! GGATCAGTGGTGTTGGAATC+AGG + chr8_1:6426866-6426885 None:intergenic 50.0%
TCCACATCACGAATCTTCGC+CGG + chr8_1:6427085-6427104 None:intergenic 50.0%
TGGTGAAGTTAACTCCACGG+CGG - chr8_1:6427156-6427175 Msa1175140:CDS 50.0%
ACACGAACACTCCTCGGATT+AGG - chr8_1:6427371-6427390 Msa1175140:intron 50.0%
GATTAGGCGTGTCACAGTGT+CGG - chr8_1:6427387-6427406 Msa1175140:intron 50.0%
GGTGGTGAATGAGACAATGC+CGG - chr8_1:6427656-6427675 Msa1175140:intron 50.0%
GAATGAGACAATGCCGGATG+CGG - chr8_1:6427662-6427681 Msa1175140:intron 50.0%
ACGGAAACCATCATATCCGG+TGG - chr8_1:6427855-6427874 Msa1175140:intron 50.0%
AAACCATCATATCCGGTGGC+CGG - chr8_1:6427859-6427878 Msa1175140:intron 50.0%
GTGTGCCGTCCATGAAATTC+CGG + chr8_1:6427881-6427900 None:intergenic 50.0%
TAAGTTATTGGATGCCGCCC+TGG - chr8_1:6428209-6428228 Msa1175140:intron 50.0%
TGGCATGTGGTTTAGTGGGA+GGG - chr8_1:6428595-6428614 Msa1175140:intron 50.0%
GGTGGCTCAGAAAACGAAAG+AGG + chr8_1:6428708-6428727 None:intergenic 50.0%
AGGCTATGCACATTGAAGGC+AGG + chr8_1:6428783-6428802 None:intergenic 50.0%
TGGGAGGCTATGCACATTGA+AGG + chr8_1:6428787-6428806 None:intergenic 50.0%
AATGTGCATAGCCTCCCATG+TGG - chr8_1:6428789-6428808 Msa1175140:CDS 50.0%
TGCATCTAAGCACCAAGCTG+TGG - chr8_1:6429379-6429398 Msa1175140:CDS 50.0%
TACCGCGACTGTGACATTAC+AGG - chr8_1:6429494-6429513 Msa1175140:CDS 50.0%
TGCCTGTAATGTCACAGTCG+CGG + chr8_1:6429499-6429518 None:intergenic 50.0%
CTCGTAGCACCTACTTACCT+TGG - chr8_1:6429695-6429714 Msa1175140:CDS 50.0%
CATGGCCTACCAAGGTAAGT+AGG + chr8_1:6429707-6429726 None:intergenic 50.0%
CTACTTACCTTGGTAGGCCA+TGG - chr8_1:6429705-6429724 Msa1175140:CDS 50.0%
ACCCAACTTATCCACCCTAC+TGG + chr8_1:6429785-6429804 None:intergenic 50.0%
! GCATAGAGGATGCTACTTGG+AGG + chr8_1:6429821-6429840 None:intergenic 50.0%
GAATATCAGAACACTGGGCC+AGG - chr8_1:6429842-6429861 Msa1175140:CDS 50.0%
ATGTAGCCGGGAGAGTCAAA+TGG - chr8_1:6429870-6429889 Msa1175140:CDS 50.0%
TGTAGCCGGGAGAGTCAAAT+GGG - chr8_1:6429871-6429890 Msa1175140:CDS 50.0%
CCACTCTGGGCCTTGAATAA+AGG + chr8_1:6429951-6429970 None:intergenic 50.0%
CCTTTATTCAAGGCCCAGAG+TGG - chr8_1:6429948-6429967 Msa1175140:CDS 50.0%
AAGCACTTGGCAACCACTCT+GGG + chr8_1:6429964-6429983 None:intergenic 50.0%
! ACTGCTTTGAGTGAGGTGGC+GGG + chr8_1:6426791-6426810 None:intergenic 55.0%
GAAGCGCGTGAGAGAAAGCT+TGG + chr8_1:6426936-6426955 None:intergenic 55.0%
TCCGGCGAAGATTCGTGATG+TGG - chr8_1:6427081-6427100 Msa1175140:CDS 55.0%
TGTGGAGACATGGCTGAGTG+CGG - chr8_1:6427099-6427118 Msa1175140:CDS 55.0%
ATGGCTGAGTGCGGCGTTAA+CGG - chr8_1:6427108-6427127 Msa1175140:CDS 55.0%
ACTGTGACACGCCTAATCCG+AGG + chr8_1:6427385-6427404 None:intergenic 55.0%
TGCTTGGAGAGTTTCCGGAG+TGG - chr8_1:6427601-6427620 Msa1175140:intron 55.0%
TGGAGAGTTTCCGGAGTGGT+TGG - chr8_1:6427605-6427624 Msa1175140:intron 55.0%
GGAGAGTTTCCGGAGTGGTT+GGG - chr8_1:6427606-6427625 Msa1175140:intron 55.0%
GTTTCCGGAGTGGTTGGGAA+CGG - chr8_1:6427611-6427630 Msa1175140:intron 55.0%
ATTCCGGCCACCGGATATGA+TGG + chr8_1:6427865-6427884 None:intergenic 55.0%
ATCCGGTGGCCGGAATTTCA+TGG - chr8_1:6427869-6427888 Msa1175140:intron 55.0%
GTCCATGAAATTCCGGCCAC+CGG + chr8_1:6427874-6427893 None:intergenic 55.0%
GGTGGCCGGAATTTCATGGA+CGG - chr8_1:6427873-6427892 Msa1175140:intron 55.0%
GTGGCATGTGGTTTAGTGGG+AGG - chr8_1:6428594-6428613 Msa1175140:intron 55.0%
CAGATCGCATTGCCACAGCT+TGG + chr8_1:6429394-6429413 None:intergenic 55.0%
CAAGCTGTGGCAATGCGATC+TGG - chr8_1:6429392-6429411 Msa1175140:CDS 55.0%
! GGTGCTACGAGATTGTCACC+AGG + chr8_1:6429686-6429705 None:intergenic 55.0%
GACAGCATCTTCGTCTCCGA+GGG + chr8_1:6429912-6429931 None:intergenic 55.0%
TGACAGCATCTTCGTCTCCG+AGG + chr8_1:6429913-6429932 None:intergenic 55.0%
! GAAGCACTTGGCAACCACTC+TGG + chr8_1:6429965-6429984 None:intergenic 55.0%
! CGGGTGTTAACGCGGTGTTG+GGG + chr8_1:6426772-6426791 None:intergenic 60.0%
GCGGGTGTTAACGCGGTGTT+GGG + chr8_1:6426773-6426792 None:intergenic 60.0%
!! TGAGGTGGCGGGTGTTAACG+CGG + chr8_1:6426780-6426799 None:intergenic 60.0%
TCTGCCGTTCCCAACCACTC+CGG + chr8_1:6427618-6427637 None:intergenic 60.0%
AGTGGTTGGGAACGGCAGAG+AGG - chr8_1:6427619-6427638 Msa1175140:intron 60.0%
AGAGAGGAGGCTGCTTGCGA+CGG - chr8_1:6427635-6427654 Msa1175140:intron 60.0%
TGAGACAATGCCGGATGCGG+TGG - chr8_1:6427665-6427684 Msa1175140:intron 60.0%
! GTGGTGGCGAAGGATGGAAG+TGG - chr8_1:6427684-6427703 Msa1175140:intron 60.0%
ACCGGCCCATTTGACTCTCC+CGG + chr8_1:6429879-6429898 None:intergenic 60.0%
! TCCGAGGGCGGGCTTATAAC+CGG + chr8_1:6429897-6429916 None:intergenic 60.0%
AGCATCTTCGTCTCCGAGGG+CGG + chr8_1:6429909-6429928 None:intergenic 60.0%
GGCGGGTGTTAACGCGGTGT+TGG + chr8_1:6426774-6426793 None:intergenic 65.0%
TATAACACCACGCGCCGCCG+TGG + chr8_1:6427173-6427192 None:intergenic 65.0%
!! GGCGGCGCGTGGTGTTATAC+CGG - chr8_1:6427174-6427193 Msa1175140:CDS 65.0%
GGTTGGGAACGGCAGAGAGG+AGG - chr8_1:6427622-6427641 Msa1175140:intron 65.0%
GACAATGCCGGATGCGGTGG+TGG - chr8_1:6427668-6427687 Msa1175140:intron 65.0%
TCCTTCGCCACCACCGCATC+CGG + chr8_1:6427678-6427697 None:intergenic 65.0%
! GATGCGGTGGTGGCGAAGGA+TGG - chr8_1:6427678-6427697 Msa1175140:intron 65.0%
GGGCCAGGAGCAGATGTAGC+CGG - chr8_1:6429857-6429876 Msa1175140:CDS 65.0%
GGCCAGGAGCAGATGTAGCC+GGG - chr8_1:6429858-6429877 Msa1175140:CDS 65.0%
CTCCCGGCTACATCTGCTCC+TGG + chr8_1:6429863-6429882 None:intergenic 65.0%
GCCGGGAGAGTCAAATGGGC+CGG - chr8_1:6429875-6429894 Msa1175140:CDS 65.0%
GCCGGTTATAAGCCCGCCCT+CGG - chr8_1:6429893-6429912 Msa1175140:CDS 65.0%
GCATCTTCGTCTCCGAGGGC+GGG + chr8_1:6429908-6429927 None:intergenic 65.0%
GTTAACTCCACGGCGGCGCG+TGG - chr8_1:6427163-6427182 Msa1175140:CDS 70.0%
GAGGAGGCTGCTTGCGACGG+TGG - chr8_1:6427638-6427657 Msa1175140:intron 70.0%
! GCCGGATGCGGTGGTGGCGA+AGG - chr8_1:6427674-6427693 Msa1175140:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 6426330 6430276 6426330 ID=Msa1175140;Name=Msa1175140
chr8_1 mRNA 6426330 6430276 6426330 ID=Msa1175140-mRNA-1;Parent=Msa1175140;Name=Msa1175140-mRNA-1;_AED=0.07;_eAED=0.07;_QI=242|1|1|1|1|1|3|267|582
chr8_1 exon 6426330 6427282 6426330 ID=Msa1175140-mRNA-1:exon:2283;Parent=Msa1175140-mRNA-1
chr8_1 exon 6428682 6429007 6428682 ID=Msa1175140-mRNA-1:exon:2282;Parent=Msa1175140-mRNA-1
chr8_1 exon 6429298 6430276 6429298 ID=Msa1175140-mRNA-1:exon:2281;Parent=Msa1175140-mRNA-1
chr8_1 five_prime_UTR 6430035 6430276 6430035 ID=Msa1175140-mRNA-1:five_prime_utr;Parent=Msa1175140-mRNA-1
chr8_1 CDS 6429298 6430034 6429298 ID=Msa1175140-mRNA-1:cds;Parent=Msa1175140-mRNA-1
chr8_1 CDS 6428682 6429007 6428682 ID=Msa1175140-mRNA-1:cds;Parent=Msa1175140-mRNA-1
chr8_1 CDS 6426597 6427282 6426597 ID=Msa1175140-mRNA-1:cds;Parent=Msa1175140-mRNA-1
chr8_1 three_prime_UTR 6426330 6426596 6426330 ID=Msa1175140-mRNA-1:three_prime_utr;Parent=Msa1175140-mRNA-1
Gene Sequence

>Msa1175140

ATGGATACTATGAAATCGTTCAAAGGTTACGGCAAAGTAGACGAAATAGAACAACAAGCATTCCAAAAAAAGACACGTAAACGCATCACAATCATAATCATCTCCTCCATCATTCTAGTAGCAGTCATCATAGCTGCAGTTGCAGGAATCCTCATACACAAGCACAACACCGAATCCTCTTCCTCACAAAACTCACTCCCCAACACCGCGTTAACACCCGCCACCTCACTCAAAGCAGTTTGTGAGTCAACTCAGTATCCTAACTCATGCTTCTCTTCCATCTCTTCTCTTCCTGATTCCAACACCACTGATCCTGAACAACTCTTCAAACTCTCACTCAAAGTCGCCATTGATGAACTCTCCAAGCTTTCTCTCACGCGCTTCAGTGAAAAAGCCACTGATCCGCGTGTTAAGAAAGCTATTGGAGTTTGTGATAATGTTCTTAAGGATTCGTTGGATCGGTTGAATGATTCAATGTCCACGATTGTTGATGGTGGAAAGATGCTTTCTCCGGCGAAGATTCGTGATGTGGAGACATGGCTGAGTGCGGCGTTAACGGATCATGATACGTGTTTGGATGCTGTTGGTGAAGTTAACTCCACGGCGGCGCGTGGTGTTATACCGGAAATAGAAAGGATCATGAGAAACTCTACGGAGTTTGCAAGTAATAGTTTGGCCATTGTGACCAAGGTGATCAGATTGTTGTCAAATTTTGAAGTTTCAAATCATCACCGCAGGTTGCTTGGAGAGTTTCCGGAGTGGTTGGGAACGGCAGAGAGGAGGCTGCTTGCGACGGTGGTGAATGAGACAATGCCGGATGCGGTGGTGGCGAAGGATGGAAGTGGACAGTATAAAACAATAGGGGAGGCATTGAAGTTGGTGAAGAAGAAGAGTCTTCAGAGATTTGTGGTGTATGTGAAGAAAGGGGTTTATGTAGAGAATATTGATTTGGATAAGAATACTTGGAATGTGATGATTTATGGTGATGGTATGACGGAAACCATCATATCCGGTGGCCGGAATTTCATGGACGGCACACCTACCTTTGAAACCGCCACTTTTGCTGTTAAAGGCAAGGGATTCATTGCCAAAGACATACAATTCTTGAACACTGCAGGTGCATCTAAGCACCAAGCTGTGGCAATGCGATCTGGCTCAGATCAATCTGTGTTCTATAGGTGTTCATTTGTTGGATATCAGGATACTCTTTATGCACATTCAAATCGTCAATTCTACCGCGACTGTGACATTACAGGCACCATAGATTTCATATTCGGAAATGCCGCTGCTGTGTTCCAAAATTGCAAAATCATGCCTAGACAGCCTATGTCAAACCAGTTCAACACAATAACAGCTCAGGGTAAAAAGGATCCTAATCAAAACTCTGGAATTGTGATCCAGAAATCGACTTTCACTACATTACCTGGTGACAATCTCGTAGCACCTACTTACCTTGGTAGGCCATGGAAAGATTTCTCCACCACTATTATCATGAAATCAGAAATTGGCTCATTCTTGAAACCAGTAGGGTGGATAAGTTGGGTTGCTAATGTGGAACCTCCAAGTAGCATCCTCTATGCTGAATATCAGAACACTGGGCCAGGAGCAGATGTAGCCGGGAGAGTCAAATGGGCCGGTTATAAGCCCGCCCTCGGAGACGAAGATGCTGTCAAATTCACTGTTGATTCCTTTATTCAAGGCCCAGAGTGGTTGCCAAGTGCTTCTGTGCAGTTTGATTCTACCATTTGA
Protein sequence

>Msa1175140

MDTMKSFKGYGKVDEIEQQAFQKKTRKRITIIIISSIILVAVIIAAVAGILIHKHNTESSSSQNSLPNTALTPATSLKAVCESTQYPNSCFSSISSLPDSNTTDPEQLFKLSLKVAIDELSKLSLTRFSEKATDPRVKKAIGVCDNVLKDSLDRLNDSMSTIVDGGKMLSPAKIRDVETWLSAALTDHDTCLDAVGEVNSTAARGVIPEIERIMRNSTEFASNSLAIVTKVIRLLSNFEVSNHHRRLLGEFPEWLGTAERRLLATVVNETMPDAVVAKDGSGQYKTIGEALKLVKKKSLQRFVVYVKKGVYVENIDLDKNTWNVMIYGDGMTETIISGGRNFMDGTPTFETATFAVKGKGFIAKDIQFLNTAGASKHQAVAMRSGSDQSVFYRCSFVGYQDTLYAHSNRQFYRDCDITGTIDFIFGNAAAVFQNCKIMPRQPMSNQFNTITAQGKKDPNQNSGIVIQKSTFTTLPGDNLVAPTYLGRPWKDFSTTIIMKSEIGSFLKPVGWISWVANVEPPSSILYAEYQNTGPGADVAGRVKWAGYKPALGDEDAVKFTVDSFIQGPEWLPSASVQFDSTI*