AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1180790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1180790 MtrunA17_Chr8g0344911 93.103 58 4 0 35 92 208 265 9.68e-29 112
Msa1180790 MtrunA17_Chr8g0344911 96.429 56 2 0 94 149 339 394 2.79e-28 111
Msa1180790 MtrunA17_Chr4g0069981 72.131 61 17 0 32 92 197 257 4.66e-22 93.6
Msa1180790 MtrunA17_Chr4g0069981 65.217 69 22 1 81 149 320 386 1.74e-20 89.0
Msa1180790 MtrunA17_Chr4g0014511 60.714 56 22 0 94 149 348 403 7.29e-15 72.4
Msa1180790 MtrunA17_Chr4g0014511 38.462 91 56 0 35 125 217 307 3.32e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1180790 AT3G14205.2 78.571 56 12 0 94 149 150 205 2.86e-20 88.6
Msa1180790 AT3G14205.2 63.793 58 21 0 35 92 19 76 3.02e-18 82.8
Msa1180790 AT3G14205.1 78.571 56 12 0 94 149 325 380 2.86e-20 88.6
Msa1180790 AT3G14205.1 63.793 58 21 0 35 92 194 251 3.66e-18 82.4
Msa1180790 AT5G20840.1 60.870 69 25 1 81 149 318 384 6.98e-18 81.6
Msa1180790 AT5G20840.1 66.071 56 19 0 37 92 200 255 5.17e-16 76.3
Msa1180790 AT1G17340.1 43.000 100 53 1 34 129 193 292 1.63e-17 80.5
Msa1180790 AT3G43220.3 57.971 69 27 1 81 149 309 375 2.07e-17 80.5
Msa1180790 AT3G43220.3 65.517 58 20 0 35 92 189 246 2.48e-17 80.1
Msa1180790 AT3G43220.1 57.971 69 27 1 81 149 309 375 2.07e-17 80.5
Msa1180790 AT3G43220.1 65.517 58 20 0 35 92 189 246 2.46e-17 80.1
Msa1180790 AT3G43220.2 57.971 69 27 1 81 149 309 375 2.24e-17 80.1
Msa1180790 AT3G43220.2 65.517 58 20 0 35 92 189 246 2.53e-17 80.1
Msa1180790 AT1G22620.1 57.895 57 24 0 94 150 340 396 1.33e-14 72.4
Msa1180790 AT1G22620.1 39.560 91 55 0 35 125 209 299 1.40e-13 69.3

Find 140 sgRNAs with CRISPR-Local

Find 483 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTCCATCTGCTAAATT+TGG 0.146934 8_1:-15015100 None:intergenic
ATCAAGTTCAGTATAATAAT+TGG 0.194142 8_1:-15013006 None:intergenic
TGTACTGTTGCCTTAGTCTA+TGG 0.210925 8_1:+15011676 Msa1180790:CDS
GACACATTAGCCTTTCAATA+TGG 0.211695 8_1:+15014006 Msa1180790:three_prime_UTR
TCAGATCAACATTACCTTCT+TGG 0.242733 8_1:+15015067 Msa1180790:three_prime_UTR
ATATTATACAGGCAAGTTTA+TGG 0.243697 8_1:+15015957 Msa1180790:intron
TGCTTGATAATGTACCTAAT+TGG 0.245102 8_1:-15019432 None:intergenic
TCCAAAAGAGATTGCTTATC+AGG 0.251218 8_1:-15015774 None:intergenic
AGGCGCTCACGGCACTATGC+TGG 0.251966 8_1:+15012069 Msa1180790:CDS
TCCTGATAAGCAATCTCTTT+TGG 0.253320 8_1:+15015773 Msa1180790:three_prime_UTR
CCAGTCCACATCAAGGAAAT+TGG 0.290418 8_1:-15016054 None:intergenic
ATACTGATAGCTTTGAAAAT+CGG 0.303449 8_1:+15019152 Msa1180790:three_prime_UTR
TGAGGTGCCGGAAGTGAATC+TGG 0.309948 8_1:+15017842 Msa1180790:three_prime_UTR
GCTTGATAATGTACCTAATT+GGG 0.314336 8_1:-15019431 None:intergenic
TTGACGAAACACTGTTTGTT+TGG 0.328181 8_1:+15011605 Msa1180790:CDS
ATCACTATAATAACCATTTC+CGG 0.329528 8_1:-15013758 None:intergenic
GGACGTCAGCTACATGCATT+TGG 0.338791 8_1:+15013907 Msa1180790:three_prime_UTR
AGTTCTTAACTTGTGGAATC+AGG 0.339598 8_1:+15011632 Msa1180790:CDS
CTTTGCTGTACAGAAATAAA+TGG 0.340460 8_1:+15019263 Msa1180790:three_prime_UTR
GAGAATCCTGTCATGAGATA+TGG 0.353658 8_1:+15012979 Msa1180790:CDS
AATCCCTCTGGACTCATCTT+TGG 0.355707 8_1:-15013452 None:intergenic
TGTCTTGAGGTATCTTCATT+GGG 0.364479 8_1:+15013235 Msa1180790:CDS
CAACAGTACAGGAAGTATTC+TGG 0.371768 8_1:-15011663 None:intergenic
TACTGATAGCTTTGAAAATC+GGG 0.372447 8_1:+15019153 Msa1180790:three_prime_UTR
CCAATTTCCTTGATGTGGAC+TGG 0.383314 8_1:+15016054 Msa1180790:three_prime_UTR
CACCAACGTGCTATCACAAC+TGG 0.387289 8_1:+15013373 Msa1180790:CDS
GGGGCATTTCCAGCCACAAC+AGG 0.392246 8_1:+15015018 Msa1180790:three_prime_UTR
ACACATTAGCCTTTCAATAT+GGG 0.394386 8_1:+15014007 Msa1180790:three_prime_UTR
GTGAAAGCGACTCTACAAAT+AGG 0.396085 8_1:+15015712 Msa1180790:three_prime_UTR
TATTAAACTTGGTAACCCTT+TGG 0.403415 8_1:+15013948 Msa1180790:three_prime_UTR
TTGTCTTGAGGTATCTTCAT+TGG 0.406474 8_1:+15013234 Msa1180790:CDS
TTCTCTACAGAAAGTCAAAT+AGG 0.406814 8_1:+15011465 Msa1180790:CDS
GGACTCATCTTTGGTGTCAC+TGG 0.407549 8_1:-15013443 None:intergenic
TCACATTTGTTATGATGAAC+AGG 0.413761 8_1:+15016013 Msa1180790:three_prime_UTR
TTATTACAACAATACATATA+CGG 0.423770 8_1:+15014818 Msa1180790:three_prime_UTR
TATTAATAAAACTTTGAGTA+AGG 0.424613 8_1:+15013207 Msa1180790:CDS
AATTTAGCAGATGGAATTGA+TGG 0.425095 8_1:+15015103 Msa1180790:three_prime_UTR
TCAGATGAGTACGGACAGTC+TGG 0.425148 8_1:-15015747 None:intergenic
TCAAGTTCAGTATAATAATT+GGG 0.435680 8_1:-15013005 None:intergenic
TTTAAACCTTAGTTTACGTC+TGG 0.438665 8_1:+15019528 Msa1180790:three_prime_UTR
CAATCTGATGGCAATATTCT+CGG 0.439903 8_1:+15015690 Msa1180790:three_prime_UTR
AGGCAAGTTTATGGAGGAAC+GGG 0.442530 8_1:+15015966 Msa1180790:intron
GACGTCAGCTACATGCATTT+GGG 0.443513 8_1:+15013908 Msa1180790:three_prime_UTR
AATGTTGCACAGTATGCTTA+TGG 0.455792 8_1:+15013871 Msa1180790:three_prime_UTR
AAACTTTAAATTCTTCATAG+TGG 0.456392 8_1:-15011496 None:intergenic
GAATCAAGCTTCCACACTAC+TGG 0.457933 8_1:-15015046 None:intergenic
CTTACTCAGAGTAGGAATAT+CGG 0.464543 8_1:-15013478 None:intergenic
AATGAAAGTTTATGAGTCCA+TGG 0.465884 8_1:+15013981 Msa1180790:three_prime_UTR
GATATAGGTCAGGAGACATT+AGG 0.466832 8_1:-15019212 None:intergenic
AAGGAAACAGAAGCCGGAAA+TGG 0.475723 8_1:+15013745 Msa1180790:three_prime_UTR
GGGTTTCCATATCTCATGAC+AGG 0.477238 8_1:-15012985 None:intergenic
TAAATACTGACCTTCAAGAT+AGG 0.479402 8_1:-15017868 None:intergenic
AGTCATGAATTCTCATCCTT+CGG 0.480296 8_1:-15019242 None:intergenic
TTTCTAGAAGTAGAGGTCAA+TGG 0.482402 8_1:+15014751 Msa1180790:three_prime_UTR
ATTAATAGACTTAACAGCAT+TGG 0.484492 8_1:-15013191 None:intergenic
TTCATTAAATCCTTTGCCAA+AGG 0.487276 8_1:-15013964 None:intergenic
ATCTTCATTGGGATCTGACT+TGG 0.488595 8_1:+15013246 Msa1180790:CDS
TGGAACAAGTTCTTAACTTG+TGG 0.491830 8_1:+15011625 Msa1180790:CDS
AAAGCCAAGACGGTTCAATC+AGG 0.493324 8_1:+15013808 Msa1180790:three_prime_UTR
TAGGTCCCCAGATTCACTTC+CGG 0.493412 8_1:-15017849 None:intergenic
GAATCCCCACATATTAAACT+TGG 0.495798 8_1:+15013937 Msa1180790:three_prime_UTR
TCATTAAATCCTTTGCCAAA+GGG 0.496371 8_1:-15013963 None:intergenic
AATTAAATTATATACATGAA+TGG 0.497989 8_1:-15019466 None:intergenic
CTTAACAGCATTGGCGAACT+CGG 0.498542 8_1:-15013182 None:intergenic
CGGATAAGTTGATATAGGTC+AGG 0.499063 8_1:-15019222 None:intergenic
CCTCTGCTGAAGCCTGCTTG+TGG 0.502062 8_1:+15015798 Msa1180790:three_prime_UTR
CAAATAGAAGTTCCACAAGC+AGG 0.503180 8_1:-15015810 None:intergenic
TATTGTTGTAATAACACTGT+AGG 0.505578 8_1:-15014809 None:intergenic
TATTATACTGAACTTGATCA+AGG 0.508355 8_1:+15013011 Msa1180790:CDS
CACATTAGCCTTTCAATATG+GGG 0.510110 8_1:+15014008 Msa1180790:three_prime_UTR
GAACTTCTATTTGTCAATGC+AGG 0.515741 8_1:+15015820 Msa1180790:three_prime_UTR
CTGCTCCAATTTCCTTGATG+TGG 0.517591 8_1:+15016049 Msa1180790:three_prime_UTR
CATTACCTTCTTGGAAGTCA+TGG 0.520038 8_1:+15015076 Msa1180790:three_prime_UTR
TAATAAAACTTTGAGTAAGG+AGG 0.524239 8_1:+15013210 Msa1180790:CDS
ACTTGGTAACCCTTTGGCAA+AGG 0.524679 8_1:+15013954 Msa1180790:three_prime_UTR
GGTTACCAAGTTTAATATGT+GGG 0.525085 8_1:-15013942 None:intergenic
TTTGAAAATCGGGTTACTCA+TGG 0.527034 8_1:+15019163 Msa1180790:three_prime_UTR
TACAACAATACATATACGGA+CGG 0.528782 8_1:+15014822 Msa1180790:three_prime_UTR
GAATATCGGAATAATCCCTC+TGG 0.528906 8_1:-15013464 None:intergenic
GTAGGGTTCGAATAAGCTCT+TGG 0.528925 8_1:-15014791 None:intergenic
GAGGTGCCGGAAGTGAATCT+GGG 0.531493 8_1:+15017843 Msa1180790:three_prime_UTR
TCCTTCGGATAAGTTGATAT+AGG 0.535865 8_1:-15019227 None:intergenic
TGAGCTAATAACTGAGGTGC+CGG 0.540350 8_1:+15017830 Msa1180790:three_prime_UTR
GGGTTACCAAGTTTAATATG+TGG 0.540914 8_1:-15013943 None:intergenic
CATGGTCCAAATTTAGCAGA+TGG 0.542233 8_1:+15015094 Msa1180790:three_prime_UTR
GCTATCACAACTGGGAAAAG+TGG 0.546278 8_1:+15013382 Msa1180790:CDS
GTGAAGAAGAACTACTTGAC+AGG 0.547343 8_1:+15016099 Msa1180790:three_prime_UTR
ATTGTTGTAATAACACTGTA+GGG 0.548915 8_1:-15014808 None:intergenic
CAGTTGTGATAGCACGTTGG+TGG 0.550356 8_1:-15013372 None:intergenic
TTGGACCATGACTTCCAAGA+AGG 0.551591 8_1:-15015081 None:intergenic
CTTGATAATGTACCTAATTG+GGG 0.554741 8_1:-15019430 None:intergenic
TTGACTTGATTACCATTGCT+AGG 0.555440 8_1:+15012049 Msa1180790:CDS
ATGAAAGTTTATGAGTCCAT+GGG 0.555783 8_1:+15013982 Msa1180790:three_prime_UTR
ATAGACTAAGGCAACAGTAC+AGG 0.558870 8_1:-15011674 None:intergenic
AATCTGGGGACCTATCTTGA+AGG 0.559663 8_1:+15017858 Msa1180790:three_prime_UTR
AATGGTTATTATAGTGATGA+TGG 0.565030 8_1:+15013763 Msa1180790:three_prime_UTR
AAAGGCTAATGTGTCGCCCA+TGG 0.569063 8_1:-15013998 None:intergenic
GAGTAAGGAGGATTGTCTTG+AGG 0.571483 8_1:+15013222 Msa1180790:CDS
ACTTGCGGCTAGATATAGAA+AGG 0.572386 8_1:-15012026 None:intergenic
GTTACCAAGTTTAATATGTG+GGG 0.573592 8_1:-15013941 None:intergenic
ACCTATATCAACTTATCCGA+AGG 0.575997 8_1:+15019226 Msa1180790:three_prime_UTR
GTGCCGTGAGCGCCTAGCAA+TGG 0.576081 8_1:-15012061 None:intergenic
ATAAGCATACTGTGCAACAT+TGG 0.579135 8_1:-15013869 None:intergenic
ACAACAATACATATACGGAC+GGG 0.579913 8_1:+15014823 Msa1180790:three_prime_UTR
AAGCAAACTCAATTGTTGAC+GGG 0.579966 8_1:+15011435 Msa1180790:CDS
AAGAAAGCCAGTCCACATCA+AGG 0.580107 8_1:-15016061 None:intergenic
CGACCGCCAGACGTAAACTA+AGG 0.580596 8_1:-15019534 None:intergenic
CCACAAGCAGGCTTCAGCAG+AGG 0.581720 8_1:-15015798 None:intergenic
ATCTGACTTGGCATTCGAGA+CGG 0.583512 8_1:+15013258 Msa1180790:CDS
CGGTTCAATCAGGCGTCTTG+AGG 0.583992 8_1:+15013818 Msa1180790:three_prime_UTR
ATTAGAAGATCACAATCTGA+TGG 0.595436 8_1:+15015678 Msa1180790:three_prime_UTR
CAGGCAAGTTTATGGAGGAA+CGG 0.596707 8_1:+15015965 Msa1180790:intron
GCTTATGGACTAGTCGCACT+AGG 0.598991 8_1:+15013886 Msa1180790:three_prime_UTR
AGTTTATGGAGGAACGGGCA+AGG 0.603556 8_1:+15015971 Msa1180790:three_prime_UTR
ACGTTCGCGTTGAATCTGAC+TGG 0.607160 8_1:+15013407 Msa1180790:CDS
ATTTAGCAGATGGAATTGAT+GGG 0.608558 8_1:+15015104 Msa1180790:three_prime_UTR
TAGAGGTCAATGGAAGGCTG+CGG 0.610698 8_1:+15014761 Msa1180790:three_prime_UTR
GCTGATAAGGAAACAGAAGC+CGG 0.611033 8_1:+15013739 Msa1180790:three_prime_UTR
TTATGGTACTTACTCAGAGT+AGG 0.611275 8_1:-15013486 None:intergenic
AAACCTTAGTTTACGTCTGG+CGG 0.611721 8_1:+15019531 Msa1180790:three_prime_UTR
GAAGCAAACTCAATTGTTGA+CGG 0.613239 8_1:+15011434 Msa1180790:CDS
ACATTAGCCTTTCAATATGG+GGG 0.616794 8_1:+15014009 Msa1180790:three_prime_UTR
ACCAACGTGCTATCACAACT+GGG 0.623687 8_1:+15013374 Msa1180790:CDS
ACACCAAAGATGAGTCCAGA+GGG 0.627122 8_1:+15013449 Msa1180790:CDS
TCCCAGTTGTGATAGCACGT+TGG 0.631952 8_1:-15013375 None:intergenic
AACAGGGAAAACCAGTAGTG+TGG 0.633526 8_1:+15015035 Msa1180790:three_prime_UTR
GGGTTCTGCAGCGCACAACA+AGG 0.652377 8_1:+15014029 Msa1180790:three_prime_UTR
GTTCGCAGAATAGTTTCACA+CGG 0.655253 8_1:-15013160 None:intergenic
TTATACAGGCAAGTTTATGG+AGG 0.656315 8_1:+15015960 Msa1180790:intron
TTGATAATGTACCTAATTGG+GGG 0.658723 8_1:-15019429 None:intergenic
GGGCATTTCCAGCCACAACA+GGG 0.658755 8_1:+15015019 Msa1180790:three_prime_UTR
TAGAAGTAGAGGTCAATGGA+AGG 0.659220 8_1:+15014755 Msa1180790:three_prime_UTR
TGGTAATCAAGTCAAACTTG+CGG 0.664455 8_1:-15012041 None:intergenic
AATACAAAAGCAGATAGCAG+TGG 0.668330 8_1:+15019294 Msa1180790:three_prime_UTR
AGGTGCCGGAAGTGAATCTG+GGG 0.680767 8_1:+15017844 Msa1180790:three_prime_UTR
TGATAATGTACCTAATTGGG+GGG 0.681071 8_1:-15019428 None:intergenic
TTACAGTGTCAAAGCCAAGA+CGG 0.700662 8_1:+15013798 Msa1180790:three_prime_UTR
GACACCAAAGATGAGTCCAG+AGG 0.713320 8_1:+15013448 Msa1180790:CDS
CATACTGTGCAACATTGGTG+CGG 0.714917 8_1:-15013864 None:intergenic
TGTGAATGAGCTAATAACTG+AGG 0.755606 8_1:+15017824 Msa1180790:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTATTTTTTATTT+TGG + chr8_1:15014077-15014096 Msa1180790:intron 0.0%
!! AAAAAAATAATTAGAAGAAT+CGG - chr8_1:15011722-15011741 None:intergenic 10.0%
!! TATGTTTATTAGAAAATATT+TGG + chr8_1:15011954-15011973 Msa1180790:intron 10.0%
!! AAAAGATAAAAGAATATAAA+AGG - chr8_1:15013116-15013135 None:intergenic 10.0%
!!! TTTTATTTTTTATTTTGGAA+TGG + chr8_1:15014082-15014101 Msa1180790:intron 10.0%
!! ATACAAAAGTTATATATTTA+TGG + chr8_1:15014935-15014954 Msa1180790:intron 10.0%
!! TAAATAAAGTATAAAATACT+TGG - chr8_1:15016280-15016299 None:intergenic 10.0%
!! AATTAAATTATATACATGAA+TGG - chr8_1:15019469-15019488 None:intergenic 10.0%
!! TATTAATAAAACTTTGAGTA+AGG + chr8_1:15013207-15013226 Msa1180790:CDS 15.0%
!!! TTATTTTAACGATCTATTTT+AGG + chr8_1:15014206-15014225 Msa1180790:intron 15.0%
!! AAATTGATATCGATAAATAA+AGG - chr8_1:15014482-15014501 None:intergenic 15.0%
!! TGTTGAATATATTATAGAAA+CGG - chr8_1:15014604-15014623 None:intergenic 15.0%
!! TTATTACAACAATACATATA+CGG + chr8_1:15014818-15014837 Msa1180790:three_prime_UTR 15.0%
!!! TTTCATTTAAGAAATTGTTT+TGG + chr8_1:15015165-15015184 Msa1180790:intron 15.0%
!! TAATTTAATATCTTCAAAAG+TGG - chr8_1:15015418-15015437 None:intergenic 15.0%
!!! AAAAATGTTATTTCTTTGTT+TGG + chr8_1:15015645-15015664 Msa1180790:intron 15.0%
!! TTAAATGTAAAATACCAAAA+TGG + chr8_1:15016228-15016247 Msa1180790:intron 15.0%
!!! ATTTGACTTAATTTTATCAT+TGG + chr8_1:15017060-15017079 Msa1180790:intron 15.0%
!!! TACAATTTTCAAAATTTTGT+TGG + chr8_1:15017744-15017763 Msa1180790:intron 15.0%
!! TGAAATTGAATTTATAAAGT+GGG + chr8_1:15018190-15018209 Msa1180790:intron 15.0%
!!! TTCATAAGTTTTTTTTTTGA+AGG + chr8_1:15018840-15018859 Msa1180790:intron 15.0%
!!! TACATATTCATATTTTCATT+TGG + chr8_1:15019360-15019379 Msa1180790:three_prime_UTR 15.0%
!!! ACATATTCATATTTTCATTT+GGG + chr8_1:15019361-15019380 Msa1180790:three_prime_UTR 15.0%
!! AAACTTTAAATTCTTCATAG+TGG - chr8_1:15011499-15011518 None:intergenic 20.0%
!!! AGAATTTAAAGTTTTCTCAT+TGG + chr8_1:15011505-15011524 Msa1180790:intron 20.0%
!!! CATTCAACTAATTTTTCATT+TGG - chr8_1:15011573-15011592 None:intergenic 20.0%
!! AAAATTAGTTGAATGTATGT+AGG + chr8_1:15011578-15011597 Msa1180790:intron 20.0%
!! TTTAAAAAATCCATAGACTA+AGG - chr8_1:15011689-15011708 None:intergenic 20.0%
!! ATGATATATGAAATTAATCC+AGG - chr8_1:15012182-15012201 None:intergenic 20.0%
!! TAACATAAAAATACCAGTAA+GGG - chr8_1:15012271-15012290 None:intergenic 20.0%
!! TTAACATAAAAATACCAGTA+AGG - chr8_1:15012272-15012291 None:intergenic 20.0%
!! ATACATAAGAGAAGATATTA+TGG - chr8_1:15012302-15012321 None:intergenic 20.0%
!! AAGATAAAATAAAGTCAAAC+TGG + chr8_1:15012660-15012679 Msa1180790:intron 20.0%
!! AATAAGCTGAAAAAAACTTA+TGG + chr8_1:15012763-15012782 Msa1180790:intron 20.0%
!! ATAAGCTGAAAAAAACTTAT+GGG + chr8_1:15012764-15012783 Msa1180790:intron 20.0%
!! CAGTGTAAATAACATAATAT+GGG - chr8_1:15012887-15012906 None:intergenic 20.0%
!! TCAGTGTAAATAACATAATA+TGG - chr8_1:15012888-15012907 None:intergenic 20.0%
!!! TTTTTCTCTAGTATTTAAGA+AGG + chr8_1:15012924-15012943 Msa1180790:intron 20.0%
!! TCAAGTTCAGTATAATAATT+GGG - chr8_1:15013008-15013027 None:intergenic 20.0%
!! ATCAAGTTCAGTATAATAAT+TGG - chr8_1:15013009-15013028 None:intergenic 20.0%
!! AAAACTTATCAGAAAATGTT+AGG - chr8_1:15013635-15013654 None:intergenic 20.0%
!!! AAAAAAGTATAATGCTGATA+AGG + chr8_1:15013726-15013745 Msa1180790:three_prime_UTR 20.0%
!! TAATAGTATTAGAATGTTCT+TGG + chr8_1:15014456-15014475 Msa1180790:intron 20.0%
!! GTTTCTATAATATATTCAAC+AGG + chr8_1:15014603-15014622 Msa1180790:intron 20.0%
!! AAATTAAGGGAAAATTATGA+TGG - chr8_1:15014641-15014660 None:intergenic 20.0%
!! AATTTCCACTTCAAAATTAA+GGG - chr8_1:15014654-15014673 None:intergenic 20.0%
!! AAATTTCCACTTCAAAATTA+AGG - chr8_1:15014655-15014674 None:intergenic 20.0%
!!! TTACATTTTCTCATTTTACT+TGG + chr8_1:15014673-15014692 Msa1180790:intron 20.0%
!!! TACATTTTCTCATTTTACTT+GGG + chr8_1:15014674-15014693 Msa1180790:intron 20.0%
!! GTAAAAATTTGATCTCATTA+CGG + chr8_1:15014696-15014715 Msa1180790:intron 20.0%
!! AAAAATATATCAAACAAGAG+AGG - chr8_1:15014985-15015004 None:intergenic 20.0%
!!! ATATTTTTTGTTCAGATTCT+TGG + chr8_1:15014997-15015016 Msa1180790:intron 20.0%
!!! TATTTTTTGTTCAGATTCTT+GGG + chr8_1:15014998-15015017 Msa1180790:intron 20.0%
!!! ATTTAAGAAATTGTTTTGGA+GGG + chr8_1:15015169-15015188 Msa1180790:intron 20.0%
!!! CTTTATTTATAGAACAAAGT+TGG + chr8_1:15016291-15016310 Msa1180790:intron 20.0%
!! CAATAAAACAATATTTGTAG+TGG - chr8_1:15016504-15016523 None:intergenic 20.0%
!! TCAGTCTATTTCAATTATTT+AGG + chr8_1:15016617-15016636 Msa1180790:intron 20.0%
!! CAGTCTATTTCAATTATTTA+GGG + chr8_1:15016618-15016637 Msa1180790:intron 20.0%
!!! TTTATCATTTGTTGTAGAAA+TGG + chr8_1:15017280-15017299 Msa1180790:intron 20.0%
!!! TAATTAAGTTGCTTATGTTA+TGG + chr8_1:15017349-15017368 Msa1180790:intron 20.0%
!!! AAAAATTGTCAAAATGGATT+AGG - chr8_1:15017453-15017472 None:intergenic 20.0%
!! TCACAAAAAAATTGTCAAAA+TGG - chr8_1:15017459-15017478 None:intergenic 20.0%
!! TTTGATCCAATATAACTATT+TGG + chr8_1:15017609-15017628 Msa1180790:intron 20.0%
!! TTAATATTTCCTAACTGAAA+GGG - chr8_1:15017931-15017950 None:intergenic 20.0%
!! ATTAATATTTCCTAACTGAA+AGG - chr8_1:15017932-15017951 None:intergenic 20.0%
!! CACTTTATAAATTCAATTTC+AGG - chr8_1:15018191-15018210 None:intergenic 20.0%
!! CTGAAATTGAATTTATAAAG+TGG + chr8_1:15018189-15018208 Msa1180790:intron 20.0%
!!! ATAAGTTTTTTTTTTGAAGG+AGG + chr8_1:15018843-15018862 Msa1180790:intron 20.0%
!!! AGTCTATGGATTTTTTAAAC+AGG + chr8_1:15011690-15011709 Msa1180790:CDS 25.0%
! TTGTGTGAAGTTAATTAGTA+CGG + chr8_1:15011740-15011759 Msa1180790:intron 25.0%
!! TATGTTTCTACACATATTCA+AGG + chr8_1:15012341-15012360 Msa1180790:intron 25.0%
!!! TTCAAGGTTTCTTTATTTTG+TGG + chr8_1:15012357-15012376 Msa1180790:intron 25.0%
! TATATCGTACATATAATGTC+AGG - chr8_1:15012563-15012582 None:intergenic 25.0%
! TATGTTTGGATAAACAACTT+AGG + chr8_1:15012609-15012628 Msa1180790:intron 25.0%
! TTATCTAAACAGCTTATCTT+AGG - chr8_1:15012637-15012656 None:intergenic 25.0%
! TATTATACTGAACTTGATCA+AGG + chr8_1:15013011-15013030 Msa1180790:CDS 25.0%
! ATTAATAGACTTAACAGCAT+TGG - chr8_1:15013194-15013213 None:intergenic 25.0%
! TAATAAAACTTTGAGTAAGG+AGG + chr8_1:15013210-15013229 Msa1180790:CDS 25.0%
!!! GGTAAATTTCTCTTCTTTTT+TGG + chr8_1:15013279-15013298 Msa1180790:intron 25.0%
! ATCACTATAATAACCATTTC+CGG - chr8_1:15013761-15013780 None:intergenic 25.0%
! AATGGTTATTATAGTGATGA+TGG + chr8_1:15013763-15013782 Msa1180790:three_prime_UTR 25.0%
! AAAAAAAATCAAACCCTGAA+AGG - chr8_1:15014066-15014085 None:intergenic 25.0%
! AAACAGTTATTGTATAGCAT+TGG - chr8_1:15014174-15014193 None:intergenic 25.0%
!! TTTAGGTAACAAAGTTGATT+TGG + chr8_1:15014223-15014242 Msa1180790:intron 25.0%
!!! AAGTTGATTTGGTATTTGAA+AGG + chr8_1:15014234-15014253 Msa1180790:intron 25.0%
!!! AGTTGATTTGGTATTTGAAA+GGG + chr8_1:15014235-15014254 Msa1180790:intron 25.0%
!!! ATTTTCCCTTAATTTTGAAG+TGG + chr8_1:15014646-15014665 Msa1180790:intron 25.0%
! ATTGTTGTAATAACACTGTA+GGG - chr8_1:15014811-15014830 None:intergenic 25.0%
! TATTGTTGTAATAACACTGT+AGG - chr8_1:15014812-15014831 None:intergenic 25.0%
! TGCATGTAATATTACACAAA+AGG - chr8_1:15014887-15014906 None:intergenic 25.0%
!!! ATTTTTTGTTCAGATTCTTG+GGG + chr8_1:15014999-15015018 Msa1180790:intron 25.0%
!!! CATTTAAGAAATTGTTTTGG+AGG + chr8_1:15015168-15015187 Msa1180790:intron 25.0%
! AAATCATCAAGTTATATGGT+TGG - chr8_1:15015361-15015380 None:intergenic 25.0%
! ACTCAAATCATCAAGTTATA+TGG - chr8_1:15015365-15015384 None:intergenic 25.0%
!!! AAAAAGTACTCAGAATTTTG+AGG - chr8_1:15015469-15015488 None:intergenic 25.0%
!!! TTCTGAGTACTTTTTTTAGA+TGG + chr8_1:15015474-15015493 Msa1180790:intron 25.0%
!!! ATGTTATTTCTTTGTTTGGT+AGG + chr8_1:15015649-15015668 Msa1180790:intron 25.0%
! CGTGTTTAGAAATATTATAC+AGG + chr8_1:15015946-15015965 Msa1180790:intron 25.0%
! ATATTATACAGGCAAGTTTA+TGG + chr8_1:15015957-15015976 Msa1180790:intron 25.0%
! AAATACCAAAATGGAATACT+TGG + chr8_1:15016237-15016256 Msa1180790:intron 25.0%
! AAGTAATTACATTAGTTGTG+CGG + chr8_1:15016429-15016448 Msa1180790:intron 25.0%
!!! TTTCACCTAATATTTTTCGA+AGG + chr8_1:15016524-15016543 Msa1180790:intron 25.0%
! TCTATTTCAATTATTTAGGG+AGG + chr8_1:15016621-15016640 Msa1180790:intron 25.0%
! GGACTATAACATAAACATAA+AGG - chr8_1:15016698-15016717 None:intergenic 25.0%
! TTAGCATATTGAAAGGATTT+AGG + chr8_1:15016867-15016886 Msa1180790:intron 25.0%
! TAGCATATTGAAAGGATTTA+GGG + chr8_1:15016868-15016887 Msa1180790:intron 25.0%
! AATAAGCTGGAAATAGATTA+TGG - chr8_1:15016986-15017005 None:intergenic 25.0%
! AGAACATCTTATAGCTTATA+TGG + chr8_1:15017032-15017051 Msa1180790:intron 25.0%
! AGCTTATAGCTTATATGAAA+TGG + chr8_1:15017231-15017250 Msa1180790:intron 25.0%
! ATTGTGATCTTGCATTTAAA+TGG + chr8_1:15017645-15017664 Msa1180790:intron 25.0%
! GTTGCTTAATGTTAATACTA+TGG + chr8_1:15017686-15017705 Msa1180790:intron 25.0%
! GTGTAAAAACCCTAAATATT+TGG + chr8_1:15017708-15017727 Msa1180790:intron 25.0%
! AAAACCCTAAATATTTGGTT+AGG + chr8_1:15017713-15017732 Msa1180790:intron 25.0%
! AAACCCTAAATATTTGGTTA+GGG + chr8_1:15017714-15017733 Msa1180790:intron 25.0%
! AAACCCTAACCAAATATTTA+GGG - chr8_1:15017720-15017739 None:intergenic 25.0%
!!! TGTTAGTTCTAGAATCATTA+TGG + chr8_1:15017892-15017911 Msa1180790:intron 25.0%
! AGAGACAAATGTTTCTTAAA+TGG - chr8_1:15018000-15018019 None:intergenic 25.0%
! GACTAACACAAATTATAAGA+TGG + chr8_1:15018257-15018276 Msa1180790:intron 25.0%
!! ATTTAGAGTCTAAGATTCAT+TGG + chr8_1:15018287-15018306 Msa1180790:intron 25.0%
!! TTTAGAGTCTAAGATTCATT+GGG + chr8_1:15018288-15018307 Msa1180790:intron 25.0%
! CTAACTTAATTCTACAAAAG+CGG - chr8_1:15018372-15018391 None:intergenic 25.0%
!!! CTAAACCTAGTCTTAAAATT+TGG - chr8_1:15018402-15018421 None:intergenic 25.0%
! ATAAAGTTATTCTAAGCTTG+TGG - chr8_1:15018666-15018685 None:intergenic 25.0%
!! TATCAGCTACAATAATTTTG+CGG - chr8_1:15018702-15018721 None:intergenic 25.0%
!!! GCAAAATTTTGTTTACCAAT+TGG - chr8_1:15019076-15019095 None:intergenic 25.0%
!! TTTTGCTTTCAATGTATTTC+AGG + chr8_1:15019090-15019109 Msa1180790:intron 25.0%
!!! ATACTGATAGCTTTGAAAAT+CGG + chr8_1:15019152-15019171 Msa1180790:three_prime_UTR 25.0%
!!! AAGCTGATTTTTGTTCAAAA+GGG + chr8_1:15019328-15019347 Msa1180790:three_prime_UTR 25.0%
!! TATTCATATTTTCATTTGGG+AGG + chr8_1:15019364-15019383 Msa1180790:three_prime_UTR 25.0%
TTCTCTACAGAAAGTCAAAT+AGG + chr8_1:15011465-15011484 Msa1180790:CDS 30.0%
ATGAAAAGTAAACTGGCAAT+AGG - chr8_1:15011873-15011892 None:intergenic 30.0%
GGAAAACATGAAAAGTAAAC+TGG - chr8_1:15011880-15011899 None:intergenic 30.0%
! TATATCACTAGACTCTTTTC+TGG - chr8_1:15011936-15011955 None:intergenic 30.0%
! TAAAAAGAAAAGCACAAACC+TGG - chr8_1:15012096-15012115 None:intergenic 30.0%
! AACATAAACCGGTTTAGTAT+AGG - chr8_1:15012212-15012231 None:intergenic 30.0%
CTCGTGAAATTAACATAAAC+CGG - chr8_1:15012223-15012242 None:intergenic 30.0%
! ACGAGTTTCTAGAAAAGATT+TGG + chr8_1:15012238-15012257 Msa1180790:intron 30.0%
ATAAAAATACCAGTAAGGGA+TGG - chr8_1:15012267-15012286 None:intergenic 30.0%
CAAACATAAGTGAGAAACAA+AGG - chr8_1:15012597-15012616 None:intergenic 30.0%
! CTTTGTTTCTCACTTATGTT+TGG + chr8_1:15012595-15012614 Msa1180790:intron 30.0%
GCTTATTTCAACTTATCTAC+TGG - chr8_1:15012844-15012863 None:intergenic 30.0%
!!! ATGCTCTATAGATTTTTTCC+CGG + chr8_1:15013305-15013324 Msa1180790:intron 30.0%
AGTAATGTCAAAATAACACC+CGG - chr8_1:15013327-15013346 None:intergenic 30.0%
GTTACCAAGTTTAATATGTG+GGG - chr8_1:15013944-15013963 None:intergenic 30.0%
GGTTACCAAGTTTAATATGT+GGG - chr8_1:15013945-15013964 None:intergenic 30.0%
! TATTAAACTTGGTAACCCTT+TGG + chr8_1:15013948-15013967 Msa1180790:three_prime_UTR 30.0%
TCATTAAATCCTTTGCCAAA+GGG - chr8_1:15013966-15013985 None:intergenic 30.0%
TTCATTAAATCCTTTGCCAA+AGG - chr8_1:15013967-15013986 None:intergenic 30.0%
AATGAAAGTTTATGAGTCCA+TGG + chr8_1:15013981-15014000 Msa1180790:three_prime_UTR 30.0%
ATGAAAGTTTATGAGTCCAT+GGG + chr8_1:15013982-15014001 Msa1180790:three_prime_UTR 30.0%
!! ACACATTAGCCTTTCAATAT+GGG + chr8_1:15014007-15014026 Msa1180790:three_prime_UTR 30.0%
CAATGAATCAAGAAAACAGT+AGG - chr8_1:15014420-15014439 None:intergenic 30.0%
TTATGAACTCCTCTTGTAAA+AGG + chr8_1:15014548-15014567 Msa1180790:intron 30.0%
! TCATTACGGTTCATTCTTTT+GGG + chr8_1:15014710-15014729 Msa1180790:intron 30.0%
!! CAGATATTTTCTAGAAGTAG+AGG + chr8_1:15014744-15014763 Msa1180790:intron 30.0%
TACAACAATACATATACGGA+CGG + chr8_1:15014822-15014841 Msa1180790:three_prime_UTR 30.0%
GTATACTTTCAGATTACCTA+TGG - chr8_1:15014919-15014938 None:intergenic 30.0%
TCAATTCCATCTGCTAAATT+TGG - chr8_1:15015103-15015122 None:intergenic 30.0%
AATTTAGCAGATGGAATTGA+TGG + chr8_1:15015103-15015122 Msa1180790:three_prime_UTR 30.0%
ATTTAGCAGATGGAATTGAT+GGG + chr8_1:15015104-15015123 Msa1180790:three_prime_UTR 30.0%
ATGAACCTTTACATCATTAG+AGG + chr8_1:15015258-15015277 Msa1180790:intron 30.0%
TAGTACCTCTAATGATGTAA+AGG - chr8_1:15015266-15015285 None:intergenic 30.0%
GAGAATTAAATTCAAAGCTG+CGG - chr8_1:15015322-15015341 None:intergenic 30.0%
AACACAATAACAATGGCATT+TGG - chr8_1:15015392-15015411 None:intergenic 30.0%
! TTTTCTTTCGTCGACAAAAA+AGG - chr8_1:15015589-15015608 None:intergenic 30.0%
ATTAGAAGATCACAATCTGA+TGG + chr8_1:15015678-15015697 Msa1180790:three_prime_UTR 30.0%
!! TCACATTTGTTATGATGAAC+AGG + chr8_1:15016013-15016032 Msa1180790:three_prime_UTR 30.0%
AAGTTTACCAAACAAAGTCT+CGG - chr8_1:15016132-15016151 None:intergenic 30.0%
!!! ACTTAGAAGTTTGTTTTGAC+CGG - chr8_1:15016200-15016219 None:intergenic 30.0%
TCAAAACAAACTTCTAAGTG+AGG + chr8_1:15016201-15016220 Msa1180790:intron 30.0%
! CTATACCAAGTATTCCATTT+TGG - chr8_1:15016245-15016264 None:intergenic 30.0%
AAATGGAATACTTGGTATAG+AGG + chr8_1:15016245-15016264 Msa1180790:intron 30.0%
TTAGGCCTTCGAAAAATATT+AGG - chr8_1:15016532-15016551 None:intergenic 30.0%
! TTCATCCATGATTTAGAACA+CGG + chr8_1:15016644-15016663 Msa1180790:intron 30.0%
!! ATTTTCCGTGTTCTAAATCA+TGG - chr8_1:15016652-15016671 None:intergenic 30.0%
CCTTTCAATATGCTAATTGA+AGG - chr8_1:15016863-15016882 None:intergenic 30.0%
CCTTCAATTAGCATATTGAA+AGG + chr8_1:15016860-15016879 Msa1180790:intron 30.0%
AGCATATTGAAAGGATTTAG+GGG + chr8_1:15016869-15016888 Msa1180790:intron 30.0%
GAGAGTTTATGAAAATAAGC+TGG - chr8_1:15016999-15017018 None:intergenic 30.0%
AATAAGCTGAAAACATCTCA+TGG - chr8_1:15017179-15017198 None:intergenic 30.0%
AAGCTATCTTAGAGAGATTA+TGG - chr8_1:15017203-15017222 None:intergenic 30.0%
ACTTCTATGATAAACGCTTA+TGG + chr8_1:15017316-15017335 Msa1180790:intron 30.0%
AGTTGCTTATGTTATGGAAA+TGG + chr8_1:15017355-15017374 Msa1180790:intron 30.0%
!! AAAATGGATTAGGTCGTATT+TGG - chr8_1:15017443-15017462 None:intergenic 30.0%
TGTCATAACATGTTAGTCAA+GGG + chr8_1:15017481-15017500 Msa1180790:intron 30.0%
GTGAATTCTCAAGTGAAATT+AGG + chr8_1:15017519-15017538 Msa1180790:intron 30.0%
ATTCTCAAGTGAAATTAGGA+AGG + chr8_1:15017523-15017542 Msa1180790:intron 30.0%
!!! TGGATTTCATTTTTTGAGCA+TGG + chr8_1:15017548-15017567 Msa1180790:intron 30.0%
TTTGAGCATGGAATTAAATG+TGG + chr8_1:15017560-15017579 Msa1180790:intron 30.0%
CATGGAATTAAATGTGGAAA+GGG + chr8_1:15017566-15017585 Msa1180790:intron 30.0%
CCTCAACCAAATAGTTATAT+TGG - chr8_1:15017618-15017637 None:intergenic 30.0%
CCAATATAACTATTTGGTTG+AGG + chr8_1:15017615-15017634 Msa1180790:intron 30.0%
CAAACCCTAACCAAATATTT+AGG - chr8_1:15017721-15017740 None:intergenic 30.0%
CTAAATATTTGGTTAGGGTT+TGG + chr8_1:15017719-15017738 Msa1180790:intron 30.0%
ACCTGTATCATCAACAATAT+TGG - chr8_1:15017779-15017798 None:intergenic 30.0%
! CTCATTCACAATATTTTCTG+AGG - chr8_1:15017814-15017833 None:intergenic 30.0%
TAAATACTGACCTTCAAGAT+AGG - chr8_1:15017871-15017890 None:intergenic 30.0%
AAGAAACATTTGTCTCTTTC+TGG + chr8_1:15018003-15018022 Msa1180790:intron 30.0%
CATCAATAAGTCTTACTAAC+AGG - chr8_1:15018038-15018057 None:intergenic 30.0%
ATTCTTTGTAAACTTGAAGC+TGG + chr8_1:15018059-15018078 Msa1180790:intron 30.0%
ACTTCACAATGCAAACTTAT+TGG + chr8_1:15018089-15018108 Msa1180790:intron 30.0%
!!! GATCTTTATTTTGTTGTCCT+AGG + chr8_1:15018134-15018153 Msa1180790:intron 30.0%
!! ATCTTACAAGTCGATTTTGT+AGG + chr8_1:15018224-15018243 Msa1180790:intron 30.0%
!! TCTTACAAGTCGATTTTGTA+GGG + chr8_1:15018225-15018244 Msa1180790:intron 30.0%
! CGCTTTTGTAGAATTAAGTT+AGG + chr8_1:15018370-15018389 Msa1180790:intron 30.0%
!! CTAGTCTTAAAATTTGGTAC+GGG - chr8_1:15018396-15018415 None:intergenic 30.0%
!! CCTAGTCTTAAAATTTGGTA+CGG - chr8_1:15018397-15018416 None:intergenic 30.0%
! ACTGGTTTCTATACAAAACT+TGG - chr8_1:15018529-15018548 None:intergenic 30.0%
TATAGAAACCAGTAATCTGA+TGG + chr8_1:15018536-15018555 Msa1180790:intron 30.0%
! GGTAGATTTTCAAAAGATCT+TGG + chr8_1:15018733-15018752 Msa1180790:intron 30.0%
!! AAAAGATCTTGGTGTTTGTT+TGG + chr8_1:15018744-15018763 Msa1180790:intron 30.0%
GAGCTTATGAAAACAACTTA+TGG + chr8_1:15018813-15018832 Msa1180790:intron 30.0%
GAAGAAGAACTCAACAAAAA+TGG + chr8_1:15019124-15019143 Msa1180790:three_prime_UTR 30.0%
!! TACTGATAGCTTTGAAAATC+GGG + chr8_1:15019153-15019172 Msa1180790:three_prime_UTR 30.0%
! CTTTGCTGTACAGAAATAAA+TGG + chr8_1:15019263-15019282 Msa1180790:three_prime_UTR 30.0%
!! GAAGCTGATTTTTGTTCAAA+AGG + chr8_1:15019327-15019346 Msa1180790:three_prime_UTR 30.0%
!! TTGATAATGTACCTAATTGG+GGG - chr8_1:15019432-15019451 None:intergenic 30.0%
!! CTTGATAATGTACCTAATTG+GGG - chr8_1:15019433-15019452 None:intergenic 30.0%
!! GCTTGATAATGTACCTAATT+GGG - chr8_1:15019434-15019453 None:intergenic 30.0%
!! TGCTTGATAATGTACCTAAT+TGG - chr8_1:15019435-15019454 None:intergenic 30.0%
TTTAAACCTTAGTTTACGTC+TGG + chr8_1:15019528-15019547 Msa1180790:three_prime_UTR 30.0%
GAAGCAAACTCAATTGTTGA+CGG + chr8_1:15011434-15011453 Msa1180790:CDS 35.0%
AAGCAAACTCAATTGTTGAC+GGG + chr8_1:15011435-15011454 Msa1180790:CDS 35.0%
! TAAAGTTTTCTCATTGGCCA+AGG + chr8_1:15011511-15011530 Msa1180790:intron 35.0%
AAGCTTCAAATTGTCCATAG+TGG - chr8_1:15011542-15011561 None:intergenic 35.0%
TTGACGAAACACTGTTTGTT+TGG + chr8_1:15011605-15011624 Msa1180790:CDS 35.0%
! TGGAACAAGTTCTTAACTTG+TGG + chr8_1:15011625-15011644 Msa1180790:CDS 35.0%
!! AGTTCTTAACTTGTGGAATC+AGG + chr8_1:15011632-15011651 Msa1180790:CDS 35.0%
! GTATGTCAAACCTTTTTGTG+TGG - chr8_1:15011841-15011860 None:intergenic 35.0%
! TTTCATGTTTTCCGTATTGC+TGG + chr8_1:15011887-15011906 Msa1180790:intron 35.0%
!!! AAGTTTTGAAGCCAGCAATA+CGG - chr8_1:15011901-15011920 None:intergenic 35.0%
CTTGACAAGTGTTCATTACA+TGG + chr8_1:15011986-15012005 Msa1180790:intron 35.0%
TGGTAATCAAGTCAAACTTG+CGG - chr8_1:15012044-15012063 None:intergenic 35.0%
! TTGACTTGATTACCATTGCT+AGG + chr8_1:15012049-15012068 Msa1180790:CDS 35.0%
TGAGTGTACCTATACTAAAC+CGG + chr8_1:15012201-15012220 Msa1180790:intron 35.0%
!!! GTTTCTTTATTTTGTGGTGC+AGG + chr8_1:15012363-15012382 Msa1180790:intron 35.0%
AGGTTTCATATTCAACGAAG+AGG - chr8_1:15012543-15012562 None:intergenic 35.0%
TAACATAATATGGGCCTGTT+TGG - chr8_1:15012878-15012897 None:intergenic 35.0%
!! TTTACACTGACTGCTCATTT+TGG + chr8_1:15012898-15012917 Msa1180790:intron 35.0%
ATACTGAACTTGATCAAGGT+AGG + chr8_1:15013015-15013034 Msa1180790:intron 35.0%
TAGGCATTTCTACATGTGTA+AGG + chr8_1:15013034-15013053 Msa1180790:intron 35.0%
CGAGATGGAAAAATAAAACC+TGG - chr8_1:15013070-15013089 None:intergenic 35.0%
!!! CTTTTAGTTTAGACACGAGA+TGG - chr8_1:15013085-15013104 None:intergenic 35.0%
! TTGTCTTGAGGTATCTTCAT+TGG + chr8_1:15013234-15013253 Msa1180790:CDS 35.0%
! TGTCTTGAGGTATCTTCATT+GGG + chr8_1:15013235-15013254 Msa1180790:CDS 35.0%
GGGAAAAAATCTATAGAGCA+TGG - chr8_1:15013306-15013325 None:intergenic 35.0%
!!! TGCTCTATAGATTTTTTCCC+GGG + chr8_1:15013306-15013325 Msa1180790:intron 35.0%
GTAATGTCAAAATAACACCC+GGG - chr8_1:15013326-15013345 None:intergenic 35.0%
! ATCAACATCTTTTAGCAGCA+AGG + chr8_1:15013349-15013368 Msa1180790:intron 35.0%
CTTACTCAGAGTAGGAATAT+CGG - chr8_1:15013481-15013500 None:intergenic 35.0%
TTATGGTACTTACTCAGAGT+AGG - chr8_1:15013489-15013508 None:intergenic 35.0%
! AGGGTCAAAATGTGTTGTTA+TGG - chr8_1:15013506-15013525 None:intergenic 35.0%
CAATAGAACAACAGCAAAGA+GGG - chr8_1:15013525-15013544 None:intergenic 35.0%
ATAAGCATACTGTGCAACAT+TGG - chr8_1:15013872-15013891 None:intergenic 35.0%
AATGTTGCACAGTATGCTTA+TGG + chr8_1:15013871-15013890 Msa1180790:three_prime_UTR 35.0%
GAATCCCCACATATTAAACT+TGG + chr8_1:15013937-15013956 Msa1180790:three_prime_UTR 35.0%
GGGTTACCAAGTTTAATATG+TGG - chr8_1:15013946-15013965 None:intergenic 35.0%
!! GACACATTAGCCTTTCAATA+TGG + chr8_1:15014006-15014025 Msa1180790:three_prime_UTR 35.0%
!! CACATTAGCCTTTCAATATG+GGG + chr8_1:15014008-15014027 Msa1180790:three_prime_UTR 35.0%
!! ACATTAGCCTTTCAATATGG+GGG + chr8_1:15014009-15014028 Msa1180790:three_prime_UTR 35.0%
AGTGTATGTAGTGCAAATGT+TGG + chr8_1:15014113-15014132 Msa1180790:intron 35.0%
TGATGATCTTCAACTCACAA+GGG - chr8_1:15014290-15014309 None:intergenic 35.0%
ATGATGATCTTCAACTCACA+AGG - chr8_1:15014291-15014310 None:intergenic 35.0%
TCTATTATTGGCATGTGAAG+TGG - chr8_1:15014328-15014347 None:intergenic 35.0%
! CATCATCACTTCTTGATTTG+AGG + chr8_1:15014517-15014536 Msa1180790:intron 35.0%
! CTCATTACGGTTCATTCTTT+TGG + chr8_1:15014709-15014728 Msa1180790:intron 35.0%
! TTTCTAGAAGTAGAGGTCAA+TGG + chr8_1:15014751-15014770 Msa1180790:three_prime_UTR 35.0%
ACAACAATACATATACGGAC+GGG + chr8_1:15014823-15014842 Msa1180790:three_prime_UTR 35.0%
TCAGATCAACATTACCTTCT+TGG + chr8_1:15015067-15015086 Msa1180790:three_prime_UTR 35.0%
! ATGGAATTGATGGGTATGAT+TGG + chr8_1:15015113-15015132 Msa1180790:intron 35.0%
!!! TAAGAAATTGTTTTGGAGGG+AGG + chr8_1:15015172-15015191 Msa1180790:intron 35.0%
ATGTGATATTTGTCCTTCGA+TGG - chr8_1:15015540-15015559 None:intergenic 35.0%
TCGAAGGACAAATATCACAT+AGG + chr8_1:15015540-15015559 Msa1180790:intron 35.0%
CAATCTGATGGCAATATTCT+CGG + chr8_1:15015690-15015709 Msa1180790:three_prime_UTR 35.0%
! TCAGGATTTTCAGATGAGTA+CGG - chr8_1:15015759-15015778 None:intergenic 35.0%
! TCCTGATAAGCAATCTCTTT+TGG + chr8_1:15015773-15015792 Msa1180790:three_prime_UTR 35.0%
TCCAAAAGAGATTGCTTATC+AGG - chr8_1:15015777-15015796 None:intergenic 35.0%
GAACTTCTATTTGTCAATGC+AGG + chr8_1:15015820-15015839 Msa1180790:three_prime_UTR 35.0%
CACGTAAGTTTCTAAACATG+TGG - chr8_1:15015930-15015949 None:intergenic 35.0%
TTATACAGGCAAGTTTATGG+AGG + chr8_1:15015960-15015979 Msa1180790:intron 35.0%
! TGTGATCGTTTTCACAGTAT+TGG - chr8_1:15015998-15016017 None:intergenic 35.0%
CTTTCTTCCTAAATGAGAAG+CGG + chr8_1:15016172-15016191 Msa1180790:intron 35.0%
!!! TAGAACAAAGTTGGTTTTGC+TGG + chr8_1:15016300-15016319 Msa1180790:intron 35.0%
! GAATTTGAACGCAACTTTTG+AGG - chr8_1:15016358-15016377 None:intergenic 35.0%
AAAGTTGCGTTCAAATTCGT+TGG + chr8_1:15016360-15016379 Msa1180790:intron 35.0%
GTTTCACAAAATTGCATGAG+CGG - chr8_1:15016719-15016738 None:intergenic 35.0%
AAGACATGAAAAAGAGAGTG+AGG + chr8_1:15016762-15016781 Msa1180790:intron 35.0%
!! TAAAGGTGTTTGCTAAGTTC+TGG - chr8_1:15016799-15016818 None:intergenic 35.0%
TAATTGAAGGAACTGAGTGA+AGG - chr8_1:15016850-15016869 None:intergenic 35.0%
GCATATTGAAAGGATTTAGG+GGG + chr8_1:15016870-15016889 Msa1180790:intron 35.0%
ATCACAAGTGCTTATGTCAA+TGG - chr8_1:15016924-15016943 None:intergenic 35.0%
AGTGCGTAATCAAGAGTTTA+TGG + chr8_1:15017135-15017154 Msa1180790:intron 35.0%
CTGTCATAACATGTTAGTCA+AGG + chr8_1:15017480-15017499 Msa1180790:intron 35.0%
CAAGTGAAATTAGGAAGGAA+TGG + chr8_1:15017528-15017547 Msa1180790:intron 35.0%
GCATGGAATTAAATGTGGAA+AGG + chr8_1:15017565-15017584 Msa1180790:intron 35.0%
!! GCCAATATTGTTGATGATAC+AGG + chr8_1:15017775-15017794 Msa1180790:intron 35.0%
TGTGAATGAGCTAATAACTG+AGG + chr8_1:15017824-15017843 Msa1180790:three_prime_UTR 35.0%
ACATAACTTCCCTTTCAGTT+AGG + chr8_1:15017919-15017938 Msa1180790:intron 35.0%
TTGTCTCTTTCTGGATTTCA+AGG + chr8_1:15018012-15018031 Msa1180790:intron 35.0%
!!! CCGTACCAAATTTTAAGACT+AGG + chr8_1:15018394-15018413 Msa1180790:intron 35.0%
TTTAGCAGTTGAGAACCTTA+AGG + chr8_1:15018417-15018436 Msa1180790:intron 35.0%
TTGAGAACCTTAAGGTTGTT+TGG + chr8_1:15018425-15018444 Msa1180790:intron 35.0%
TGAGAACCTTAAGGTTGTTT+GGG + chr8_1:15018426-15018445 Msa1180790:intron 35.0%
TTGTCATACCATCAGATTAC+TGG - chr8_1:15018547-15018566 None:intergenic 35.0%
GTAGCTGATAATCTCTCATA+AGG + chr8_1:15018712-15018731 Msa1180790:intron 35.0%
! CTTATTTCCATTAGCTCTCT+AGG + chr8_1:15018888-15018907 Msa1180790:intron 35.0%
! TTTTCTAAGCTGCAACCAAT+TGG + chr8_1:15019058-15019077 Msa1180790:intron 35.0%
! CTTTCAATGTATTTCAGGTG+AGG + chr8_1:15019095-15019114 Msa1180790:intron 35.0%
TTTGAAAATCGGGTTACTCA+TGG + chr8_1:15019163-15019182 Msa1180790:three_prime_UTR 35.0%
ACCTATATCAACTTATCCGA+AGG + chr8_1:15019226-15019245 Msa1180790:three_prime_UTR 35.0%
!! TCCTTCGGATAAGTTGATAT+AGG - chr8_1:15019230-15019249 None:intergenic 35.0%
AGTCATGAATTCTCATCCTT+CGG - chr8_1:15019245-15019264 None:intergenic 35.0%
AATACAAAAGCAGATAGCAG+TGG + chr8_1:15019294-15019313 Msa1180790:three_prime_UTR 35.0%
! TATTTTCATTTGGGAGGTAG+TGG + chr8_1:15019370-15019389 Msa1180790:three_prime_UTR 35.0%
! TGATAATGTACCTAATTGGG+GGG - chr8_1:15019431-15019450 None:intergenic 35.0%
!! CAACAGTACAGGAAGTATTC+TGG - chr8_1:15011666-15011685 None:intergenic 40.0%
ATAGACTAAGGCAACAGTAC+AGG - chr8_1:15011677-15011696 None:intergenic 40.0%
TGTACTGTTGCCTTAGTCTA+TGG + chr8_1:15011676-15011695 Msa1180790:CDS 40.0%
! TTTTGTGTGGTTCAACTTCG+AGG - chr8_1:15011828-15011847 None:intergenic 40.0%
CGAAGTTGAACCACACAAAA+AGG + chr8_1:15011828-15011847 Msa1180790:intron 40.0%
ACTTGCGGCTAGATATAGAA+AGG - chr8_1:15012029-15012048 None:intergenic 40.0%
CACAGAACTGATATGCATTG+GGG - chr8_1:15012477-15012496 None:intergenic 40.0%
CCACAGAACTGATATGCATT+GGG - chr8_1:15012478-15012497 None:intergenic 40.0%
ACCACAGAACTGATATGCAT+TGG - chr8_1:15012479-15012498 None:intergenic 40.0%
AAGCACTTGGGAGACTATTT+GGG - chr8_1:15012818-15012837 None:intergenic 40.0%
TAAGCACTTGGGAGACTATT+TGG - chr8_1:15012819-15012838 None:intergenic 40.0%
ATCTACTGGCATAAGCACTT+GGG - chr8_1:15012830-15012849 None:intergenic 40.0%
TATCTACTGGCATAAGCACT+TGG - chr8_1:15012831-15012850 None:intergenic 40.0%
AGCCAATCCAATTTCCAAAC+AGG + chr8_1:15012861-15012880 Msa1180790:intron 40.0%
ATATGGGCCTGTTTGGAAAT+TGG - chr8_1:15012871-15012890 None:intergenic 40.0%
GAGAATCCTGTCATGAGATA+TGG + chr8_1:15012979-15012998 Msa1180790:CDS 40.0%
GTGTAAGGAAATCATTGACC+AGG + chr8_1:15013049-15013068 Msa1180790:intron 40.0%
GTTCGCAGAATAGTTTCACA+CGG - chr8_1:15013163-15013182 None:intergenic 40.0%
ATCTTCATTGGGATCTGACT+TGG + chr8_1:15013246-15013265 Msa1180790:CDS 40.0%
GAATATCGGAATAATCCCTC+TGG - chr8_1:15013467-15013486 None:intergenic 40.0%
GCAATAGAACAACAGCAAAG+AGG - chr8_1:15013526-15013545 None:intergenic 40.0%
ACTCACATTCCAATTGTGGT+TGG - chr8_1:15013600-15013619 None:intergenic 40.0%
AAGCACTCACATTCCAATTG+TGG - chr8_1:15013604-15013623 None:intergenic 40.0%
TTACAGTGTCAAAGCCAAGA+CGG + chr8_1:15013798-15013817 Msa1180790:three_prime_UTR 40.0%
TGTAGTGCAAATGTTGGACT+TGG + chr8_1:15014119-15014138 Msa1180790:intron 40.0%
ATGATCTTCAACTCACAAGG+GGG - chr8_1:15014288-15014307 None:intergenic 40.0%
GATGATCTTCAACTCACAAG+GGG - chr8_1:15014289-15014308 None:intergenic 40.0%
GGTGTGTGAGCTTCTATTAT+TGG - chr8_1:15014340-15014359 None:intergenic 40.0%
!! ACCTTCGTTTTGTTACACGT+AGG + chr8_1:15014357-15014376 Msa1180790:intron 40.0%
ACCTACGTGTAACAAAACGA+AGG - chr8_1:15014361-15014380 None:intergenic 40.0%
!!! AAGAGTGCTCCTTTTACAAG+AGG - chr8_1:15014560-15014579 None:intergenic 40.0%
TAGAAGTAGAGGTCAATGGA+AGG + chr8_1:15014755-15014774 Msa1180790:three_prime_UTR 40.0%
ACATGCATAGTTGCTTCCAT+AGG + chr8_1:15014900-15014919 Msa1180790:intron 40.0%
CATTACCTTCTTGGAAGTCA+TGG + chr8_1:15015076-15015095 Msa1180790:three_prime_UTR 40.0%
CATGGTCCAAATTTAGCAGA+TGG + chr8_1:15015094-15015113 Msa1180790:three_prime_UTR 40.0%
GTGGAGCAACACAATAACAA+TGG - chr8_1:15015399-15015418 None:intergenic 40.0%
! AGCTTTGACTTATCCATCGA+AGG + chr8_1:15015524-15015543 Msa1180790:intron 40.0%
TCTTTCGTCGACAAAAAAGG+AGG - chr8_1:15015586-15015605 None:intergenic 40.0%
GTGAAAGCGACTCTACAAAT+AGG + chr8_1:15015712-15015731 Msa1180790:three_prime_UTR 40.0%
CAAATAGAAGTTCCACAAGC+AGG - chr8_1:15015813-15015832 None:intergenic 40.0%
ATGACGCAAACTTGCGTAAT+TGG + chr8_1:15015864-15015883 Msa1180790:intron 40.0%
GTGAAGAAGAACTACTTGAC+AGG + chr8_1:15016099-15016118 Msa1180790:three_prime_UTR 40.0%
!!! GTTGGTTTTGCTGGTTGTTT+TGG + chr8_1:15016309-15016328 Msa1180790:intron 40.0%
!!! GTTTTGCTGGTTGTTTTGGT+GGG + chr8_1:15016313-15016332 Msa1180790:intron 40.0%
!!! TGAACGCAACTTTTGAGGTT+CGG - chr8_1:15016353-15016372 None:intergenic 40.0%
AGAGCGCAATACGAAATCTA+TGG - chr8_1:15016478-15016497 None:intergenic 40.0%
AAGGCCTAAAGCAACTTCTT+AGG + chr8_1:15016543-15016562 Msa1180790:intron 40.0%
! GTGACCTAAGAAGTTGCTTT+AGG - chr8_1:15016550-15016569 None:intergenic 40.0%
TTGCCTAGCCAGCAATATAT+CGG + chr8_1:15016820-15016839 Msa1180790:intron 40.0%
!! AAGCACTTGTGATGCTGTTT+TGG + chr8_1:15016931-15016950 Msa1180790:intron 40.0%
!!! AGCACTTGTGATGCTGTTTT+GGG + chr8_1:15016932-15016951 Msa1180790:intron 40.0%
!!! ATGCTGTTTTGGGGAGTTTA+TGG + chr8_1:15016942-15016961 Msa1180790:intron 40.0%
GAAATAGATTATGGACGCGT+CGG - chr8_1:15016977-15016996 None:intergenic 40.0%
TAAGAGTCGCACATTGTATG+AGG + chr8_1:15018160-15018179 Msa1180790:intron 40.0%
! CGATTTTGTAGGGTTGAGTT+AGG + chr8_1:15018235-15018254 Msa1180790:intron 40.0%
CAAAGCCTATATGGCTACAT+GGG + chr8_1:15018312-15018331 Msa1180790:intron 40.0%
TTTGAGCCCAAACAACCTTA+AGG - chr8_1:15018435-15018454 None:intergenic 40.0%
TCTGATGGTATGACAATACG+TGG + chr8_1:15018551-15018570 Msa1180790:intron 40.0%
TGACAATACGTGGTGAATGA+TGG + chr8_1:15018561-15018580 Msa1180790:intron 40.0%
AAGCAATCCTAGAGAGCTAA+TGG - chr8_1:15018898-15018917 None:intergenic 40.0%
GATATAGGTCAGGAGACATT+AGG - chr8_1:15019215-15019234 None:intergenic 40.0%
!! CGGATAAGTTGATATAGGTC+AGG - chr8_1:15019225-15019244 None:intergenic 40.0%
! TGTCCATAGTGGTTTGTCCT+TGG - chr8_1:15011531-15011550 None:intergenic 45.0%
!!! CTCTTTTCTGGTGCTGTCAA+TGG - chr8_1:15011924-15011943 None:intergenic 45.0%
CATTACATGGTGTCTTGTGC+AGG + chr8_1:15011999-15012018 Msa1180790:intron 45.0%
CATCTTTGCACTTGTGATCC+TGG + chr8_1:15012161-15012180 Msa1180790:intron 45.0%
TGAAGCGAGGAGTCAATGAA+AGG + chr8_1:15012390-15012409 Msa1180790:intron 45.0%
GAAGCGAGGAGTCAATGAAA+GGG + chr8_1:15012391-15012410 Msa1180790:intron 45.0%
AAGCGAGGAGTCAATGAAAG+GGG + chr8_1:15012392-15012411 Msa1180790:intron 45.0%
GTCTTTGCAGATGCTAGTGA+TGG + chr8_1:15012449-15012468 Msa1180790:intron 45.0%
CCCAATGCATATCAGTTCTG+TGG + chr8_1:15012475-15012494 Msa1180790:intron 45.0%
AAAAGAGAGGGATTGAACCC+CGG - chr8_1:15012508-15012527 None:intergenic 45.0%
! AATCCCTCTCTTTTGGTCTC+AGG + chr8_1:15012514-15012533 Msa1180790:intron 45.0%
CTTCCTGAGACCAAAAGAGA+GGG - chr8_1:15012520-15012539 None:intergenic 45.0%
GGCCTGTTTGGAAATTGGAT+TGG - chr8_1:15012866-15012885 None:intergenic 45.0%
GGGTTTCCATATCTCATGAC+AGG - chr8_1:15012988-15013007 None:intergenic 45.0%
!! CTTAACAGCATTGGCGAACT+CGG - chr8_1:15013185-15013204 None:intergenic 45.0%
GAGTAAGGAGGATTGTCTTG+AGG + chr8_1:15013222-15013241 Msa1180790:CDS 45.0%
!! ATCTGACTTGGCATTCGAGA+CGG + chr8_1:15013258-15013277 Msa1180790:CDS 45.0%
ACCAACGTGCTATCACAACT+GGG + chr8_1:15013374-15013393 Msa1180790:CDS 45.0%
GCTATCACAACTGGGAAAAG+TGG + chr8_1:15013382-15013401 Msa1180790:CDS 45.0%
ACACCAAAGATGAGTCCAGA+GGG + chr8_1:15013449-15013468 Msa1180790:CDS 45.0%
AATCCCTCTGGACTCATCTT+TGG - chr8_1:15013455-15013474 None:intergenic 45.0%
GCTGATAAGGAAACAGAAGC+CGG + chr8_1:15013739-15013758 Msa1180790:three_prime_UTR 45.0%
AAGGAAACAGAAGCCGGAAA+TGG + chr8_1:15013745-15013764 Msa1180790:three_prime_UTR 45.0%
AAAGCCAAGACGGTTCAATC+AGG + chr8_1:15013808-15013827 Msa1180790:three_prime_UTR 45.0%
CATACTGTGCAACATTGGTG+CGG - chr8_1:15013867-15013886 None:intergenic 45.0%
GACGTCAGCTACATGCATTT+GGG + chr8_1:15013908-15013927 Msa1180790:three_prime_UTR 45.0%
! ACTTGGTAACCCTTTGGCAA+AGG + chr8_1:15013954-15013973 Msa1180790:three_prime_UTR 45.0%
TGCAGAACCCCCATATTGAA+AGG - chr8_1:15014019-15014038 None:intergenic 45.0%
AGGTAACCTTGCTACCTTTC+AGG + chr8_1:15014049-15014068 Msa1180790:intron 45.0%
GGTAACCTTGCTACCTTTCA+GGG + chr8_1:15014050-15014069 Msa1180790:intron 45.0%
TCAAACCCTGAAAGGTAGCA+AGG - chr8_1:15014058-15014077 None:intergenic 45.0%
GTAGGGTTCGAATAAGCTCT+TGG - chr8_1:15014794-15014813 None:intergenic 45.0%
!!! ACTACTGGTTTTCCCTGTTG+TGG - chr8_1:15015034-15015053 None:intergenic 45.0%
AACAGGGAAAACCAGTAGTG+TGG + chr8_1:15015035-15015054 Msa1180790:three_prime_UTR 45.0%
GAATCAAGCTTCCACACTAC+TGG - chr8_1:15015049-15015068 None:intergenic 45.0%
TTGGACCATGACTTCCAAGA+AGG - chr8_1:15015084-15015103 None:intergenic 45.0%
CAGGCAAGTTTATGGAGGAA+CGG + chr8_1:15015965-15015984 Msa1180790:intron 45.0%
AGGCAAGTTTATGGAGGAAC+GGG + chr8_1:15015966-15015985 Msa1180790:intron 45.0%
CTGCTCCAATTTCCTTGATG+TGG + chr8_1:15016049-15016068 Msa1180790:three_prime_UTR 45.0%
CCAGTCCACATCAAGGAAAT+TGG - chr8_1:15016057-15016076 None:intergenic 45.0%
CCAATTTCCTTGATGTGGAC+TGG + chr8_1:15016054-15016073 Msa1180790:three_prime_UTR 45.0%
AAGAAAGCCAGTCCACATCA+AGG - chr8_1:15016064-15016083 None:intergenic 45.0%
TGCAGTTCCGAGACTTTGTT+TGG + chr8_1:15016122-15016141 Msa1180790:intron 45.0%
TCCTAAATGAGAAGCGGTTC+CGG + chr8_1:15016178-15016197 Msa1180790:intron 45.0%
!!! GGTTTTGCTGGTTGTTTTGG+TGG + chr8_1:15016312-15016331 Msa1180790:intron 45.0%
!!! GAACGCAACTTTTGAGGTTC+GGG - chr8_1:15016352-15016371 None:intergenic 45.0%
! ATTGCTGGCTAGGCAACTAA+AGG - chr8_1:15016816-15016835 None:intergenic 45.0%
TGCCTAGCCAGCAATATATC+GGG + chr8_1:15016821-15016840 Msa1180790:intron 45.0%
! TTCCCGATATATTGCTGGCT+AGG - chr8_1:15016826-15016845 None:intergenic 45.0%
AAGGCTTCCCGATATATTGC+TGG - chr8_1:15016831-15016850 None:intergenic 45.0%
!!! GCACTTGTGATGCTGTTTTG+GGG + chr8_1:15016933-15016952 Msa1180790:intron 45.0%
TGAGCTAATAACTGAGGTGC+CGG + chr8_1:15017830-15017849 Msa1180790:three_prime_UTR 45.0%
AATCTGGGGACCTATCTTGA+AGG + chr8_1:15017858-15017877 Msa1180790:three_prime_UTR 45.0%
ATGTGCGACTCTTAACACCT+AGG - chr8_1:15018154-15018173 None:intergenic 45.0%
TCATTGGGCCAAAGCCTATA+TGG + chr8_1:15018303-15018322 Msa1180790:intron 45.0%
CCATGTAGCCATATAGGCTT+TGG - chr8_1:15018314-15018333 None:intergenic 45.0%
CCAAAGCCTATATGGCTACA+TGG + chr8_1:15018311-15018330 Msa1180790:intron 45.0%
TGTGACCCATGTAGCCATAT+AGG - chr8_1:15018320-15018339 None:intergenic 45.0%
CCAGCTTGTAAGGTGAGATA+TGG - chr8_1:15018345-15018364 None:intergenic 45.0%
CCATATCTCACCTTACAAGC+TGG + chr8_1:15018342-15018361 Msa1180790:intron 45.0%
AAGCGGAAAACCAGCTTGTA+AGG - chr8_1:15018355-15018374 None:intergenic 45.0%
TAATGTACCTAATTGGGGGG+AGG - chr8_1:15019428-15019447 None:intergenic 45.0%
TGGCCAAGGACAAACCACTA+TGG + chr8_1:15011525-15011544 Msa1180790:intron 50.0%
TTACCATTGCTAGGCGCTCA+CGG + chr8_1:15012058-15012077 Msa1180790:CDS 50.0%
ATTTGGCTGCCATCCCTTAC+TGG + chr8_1:15012255-15012274 Msa1180790:intron 50.0%
! TGGTGCAGGTATTTGAAGCG+AGG + chr8_1:15012377-15012396 Msa1180790:intron 50.0%
TCAGTTCTGTGGTGCAGATC+CGG + chr8_1:15012486-15012505 Msa1180790:intron 50.0%
! GGGGTTCAATCCCTCTCTTT+TGG + chr8_1:15012507-15012526 Msa1180790:intron 50.0%
GCTTCCTGAGACCAAAAGAG+AGG - chr8_1:15012521-15012540 None:intergenic 50.0%
CAGTTGTGATAGCACGTTGG+TGG - chr8_1:15013375-15013394 None:intergenic 50.0%
CACCAACGTGCTATCACAAC+TGG + chr8_1:15013373-15013392 Msa1180790:CDS 50.0%
TCCCAGTTGTGATAGCACGT+TGG - chr8_1:15013378-15013397 None:intergenic 50.0%
ACGTTCGCGTTGAATCTGAC+TGG + chr8_1:15013407-15013426 Msa1180790:CDS 50.0%
!! GGACTCATCTTTGGTGTCAC+TGG - chr8_1:15013446-15013465 None:intergenic 50.0%
GACACCAAAGATGAGTCCAG+AGG + chr8_1:15013448-15013467 Msa1180790:CDS 50.0%
CCAATTGTGGTTGGCACAGA+TGG - chr8_1:15013591-15013610 None:intergenic 50.0%
CCATCTGTGCCAACCACAAT+TGG + chr8_1:15013588-15013607 Msa1180790:intron 50.0%
!! GCTTATGGACTAGTCGCACT+AGG + chr8_1:15013886-15013905 Msa1180790:three_prime_UTR 50.0%
GGACGTCAGCTACATGCATT+TGG + chr8_1:15013907-15013926 Msa1180790:three_prime_UTR 50.0%
AAAGGCTAATGTGTCGCCCA+TGG - chr8_1:15014001-15014020 None:intergenic 50.0%
TAGAGGTCAATGGAAGGCTG+CGG + chr8_1:15014761-15014780 Msa1180790:three_prime_UTR 50.0%
TCAGATGAGTACGGACAGTC+TGG - chr8_1:15015750-15015769 None:intergenic 50.0%
AGTTTATGGAGGAACGGGCA+AGG + chr8_1:15015971-15015990 Msa1180790:three_prime_UTR 50.0%
ACCGGAACCGCTTCTCATTT+AGG - chr8_1:15016182-15016201 None:intergenic 50.0%
TCACAGCCAGCACAAGCATT+GGG - chr8_1:15016572-15016591 None:intergenic 50.0%
ATCACAGCCAGCACAAGCAT+TGG - chr8_1:15016573-15016592 None:intergenic 50.0%
TAGGTCCCCAGATTCACTTC+CGG - chr8_1:15017852-15017871 None:intergenic 50.0%
! TTTTGTGCCTCCCCCCAATT+AGG + chr8_1:15019418-15019437 Msa1180790:three_prime_UTR 50.0%
CAGTTCTGTGGTGCAGATCC+GGG + chr8_1:15012487-15012506 Msa1180790:intron 55.0%
AGTTCTGTGGTGCAGATCCG+GGG + chr8_1:15012488-15012507 Msa1180790:intron 55.0%
GACGCCTGATTGAACCGTCT+TGG - chr8_1:15013815-15013834 None:intergenic 55.0%
CGGTTCAATCAGGCGTCTTG+AGG + chr8_1:15013818-15013837 Msa1180790:three_prime_UTR 55.0%
GGGCATTTCCAGCCACAACA+GGG + chr8_1:15015019-15015038 Msa1180790:three_prime_UTR 55.0%
!! CTGGTTTTCCCTGTTGTGGC+TGG - chr8_1:15015030-15015049 None:intergenic 55.0%
AGGTCACCCAATGCTTGTGC+TGG + chr8_1:15016563-15016582 Msa1180790:intron 55.0%
!! TGAGGTGCCGGAAGTGAATC+TGG + chr8_1:15017842-15017861 Msa1180790:three_prime_UTR 55.0%
!! GAGGTGCCGGAAGTGAATCT+GGG + chr8_1:15017843-15017862 Msa1180790:three_prime_UTR 55.0%
!! AGGTGCCGGAAGTGAATCTG+GGG + chr8_1:15017844-15017863 Msa1180790:three_prime_UTR 55.0%
GGGTTCTGCAGCGCACAACA+AGG + chr8_1:15014029-15014048 Msa1180790:three_prime_UTR 60.0%
! GGGGCATTTCCAGCCACAAC+AGG + chr8_1:15015018-15015037 Msa1180790:three_prime_UTR 60.0%
CCACAAGCAGGCTTCAGCAG+AGG - chr8_1:15015801-15015820 None:intergenic 60.0%
CCTCTGCTGAAGCCTGCTTG+TGG + chr8_1:15015798-15015817 Msa1180790:three_prime_UTR 60.0%
GTGCCGTGAGCGCCTAGCAA+TGG - chr8_1:15012064-15012083 None:intergenic 65.0%
AGGCGCTCACGGCACTATGC+TGG + chr8_1:15012069-15012088 Msa1180790:CDS 65.0%
GGCGCTCACGGCACTATGCT+GGG + chr8_1:15012070-15012089 Msa1180790:CDS 65.0%
TCACGGCACTATGCTGGGCC+AGG + chr8_1:15012075-15012094 Msa1180790:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 15011423 15019551 15011423 ID=Msa1180790;Name=Msa1180790
chr8_1 mRNA 15011423 15019551 15011423 ID=Msa1180790-mRNA-1;Parent=Msa1180790;Name=Msa1180790-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.83|0.76|1|0.91|0.69|13|1453|205
chr8_1 exon 15011423 15011514 15011423 ID=Msa1180790-mRNA-1:exon:5596;Parent=Msa1180790-mRNA-1
chr8_1 exon 15011600 15011711 15011600 ID=Msa1180790-mRNA-1:exon:5597;Parent=Msa1180790-mRNA-1
chr8_1 exon 15012021 15012096 15012021 ID=Msa1180790-mRNA-1:exon:5598;Parent=Msa1180790-mRNA-1
chr8_1 exon 15012962 15013032 15012962 ID=Msa1180790-mRNA-1:exon:5599;Parent=Msa1180790-mRNA-1
chr8_1 exon 15013145 15013279 15013145 ID=Msa1180790-mRNA-1:exon:5600;Parent=Msa1180790-mRNA-1
chr8_1 exon 15013364 15013495 15013364 ID=Msa1180790-mRNA-1:exon:5601;Parent=Msa1180790-mRNA-1
chr8_1 exon 15013681 15014050 15013681 ID=Msa1180790-mRNA-1:exon:5602;Parent=Msa1180790-mRNA-1
chr8_1 exon 15014747 15014868 15014747 ID=Msa1180790-mRNA-1:exon:5603;Parent=Msa1180790-mRNA-1
chr8_1 exon 15015012 15015125 15015012 ID=Msa1180790-mRNA-1:exon:5604;Parent=Msa1180790-mRNA-1
chr8_1 exon 15015671 15015841 15015671 ID=Msa1180790-mRNA-1:exon:5605;Parent=Msa1180790-mRNA-1
chr8_1 exon 15015968 15016120 15015968 ID=Msa1180790-mRNA-1:exon:5606;Parent=Msa1180790-mRNA-1
chr8_1 exon 15017797 15017879 15017797 ID=Msa1180790-mRNA-1:exon:5607;Parent=Msa1180790-mRNA-1
chr8_1 exon 15019112 15019551 15019112 ID=Msa1180790-mRNA-1:exon:5608;Parent=Msa1180790-mRNA-1
chr8_1 CDS 15011423 15011514 15011423 ID=Msa1180790-mRNA-1:cds;Parent=Msa1180790-mRNA-1
chr8_1 CDS 15011600 15011711 15011600 ID=Msa1180790-mRNA-1:cds;Parent=Msa1180790-mRNA-1
chr8_1 CDS 15012021 15012096 15012021 ID=Msa1180790-mRNA-1:cds;Parent=Msa1180790-mRNA-1
chr8_1 CDS 15012962 15013032 15012962 ID=Msa1180790-mRNA-1:cds;Parent=Msa1180790-mRNA-1
chr8_1 CDS 15013145 15013279 15013145 ID=Msa1180790-mRNA-1:cds;Parent=Msa1180790-mRNA-1
chr8_1 CDS 15013364 15013495 15013364 ID=Msa1180790-mRNA-1:cds;Parent=Msa1180790-mRNA-1
chr8_1 three_prime_UTR 15013681 15014050 15013681 ID=Msa1180790-mRNA-1:three_prime_utr;Parent=Msa1180790-mRNA-1
chr8_1 three_prime_UTR 15014747 15014868 15014747 ID=Msa1180790-mRNA-1:three_prime_utr;Parent=Msa1180790-mRNA-1
chr8_1 three_prime_UTR 15015012 15015125 15015012 ID=Msa1180790-mRNA-1:three_prime_utr;Parent=Msa1180790-mRNA-1
chr8_1 three_prime_UTR 15015671 15015841 15015671 ID=Msa1180790-mRNA-1:three_prime_utr;Parent=Msa1180790-mRNA-1
chr8_1 three_prime_UTR 15015968 15016120 15015968 ID=Msa1180790-mRNA-1:three_prime_utr;Parent=Msa1180790-mRNA-1
chr8_1 three_prime_UTR 15017797 15017879 15017797 ID=Msa1180790-mRNA-1:three_prime_utr;Parent=Msa1180790-mRNA-1
chr8_1 three_prime_UTR 15019112 15019551 15019112 ID=Msa1180790-mRNA-1:three_prime_utr;Parent=Msa1180790-mRNA-1
Gene Sequence

>Msa1180790

TATGTTAAAACGAAGCAAACTCAATTGTTGACGGGCAAAGATTTCTCTACAGAAAGTCAAATAGGTATTGACACCACTATGAAGAATTTAAAGATTATTGACGAAACACTGTTTGTTTGGAACAAGTTCTTAACTTGTGGAATCAGGAATAATCTCCAGAATACTTCCTGTACTGTTGCCTTAGTCTATGGATTTTTTAAACAGGTTAACCTTTCTATATCTAGCCGCAAGTTTGACTTGATTACCATTGCTAGGCGCTCACGGCACTATGCTGGGCCAGCTACAAGACTTCATTTTGAGAATCCTGTCATGAGATATGGAAACCCAATTATTATACTGAACTTGATCAAGACTCATGAAAAGAAGCCGTGTGAAACTATTCTGCGAACCGAGTTCGCCAATGCTGTTAAGTCTATTAATAAAACTTTGAGTAAGGAGGATTGTCTTGAGGTATCTTCATTGGGATCTGACTTGGCATTCGAGACGCAGCAAGGCCACCAACGTGCTATCACAACTGGGAAAAGTGGCTACGTTCGCGTTGAATCTGACTGGCATTTTCTACTGTCCAGTGACACCAAAGATGAGTCCAGAGGGATTATTCCGATATTCCTACTCTGA
Protein sequence

>Msa1180790

YVKTKQTQLLTGKDFSTESQIGIDTTMKNLKIIDETLFVWNKFLTCGIRNNLQNTSCTVALVYGFFKQVNLSISSRKFDLITIARRSRHYAGPATRLHFENPVMRYGNPIIILNLIKTHEKKPCETILRTEFANAVKSINKTLSKEDCLEVSSLGSDLAFETQQGHQRAITTGKSGYVRVESDWHFLLSSDTKDESRGIIPIFLL*