AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1180860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1180860 MtrunA17_Chr8g0340411 99.714 699 2 0 1 699 1 699 0.0 1449
Msa1180860 MtrunA17_Chr2g0331131 89.205 704 70 4 1 699 1 703 0.0 1305
Msa1180860 MtrunA17_Chr3g0140351 80.682 704 126 4 2 700 7 705 0.0 1194
Msa1180860 MtrunA17_Chr2g0292391 66.667 699 217 8 11 699 9 701 0.0 958
Msa1180860 MtrunA17_Chr4g0028991 64.631 704 228 9 7 700 21 713 0.0 925
Msa1180860 MtrunA17_Chr2g0326731 60.113 707 253 11 8 700 16 707 0.0 860
Msa1180860 MtrunA17_Chr8g0350321 21.912 502 299 17 195 667 369 806 3.24e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1180860 AT1G52150.3 83.404 705 107 5 1 699 3 703 0.0 1218
Msa1180860 AT1G52150.1 83.404 705 107 5 1 699 3 703 0.0 1216
Msa1180860 AT1G52150.2 83.286 706 107 6 1 699 3 704 0.0 1211
Msa1180860 AT4G32880.1 78.076 707 141 6 1 699 1 701 0.0 1143
Msa1180860 AT2G34710.1 65.954 702 218 11 11 698 21 715 0.0 929
Msa1180860 AT1G30490.1 64.045 712 227 12 1 698 7 703 0.0 908
Msa1180860 AT5G60690.1 62.873 703 238 8 7 700 17 705 0.0 901
Msa1180860 AT5G32670.1 63.514 74 27 0 281 354 37 110 8.05e-25 102
Msa1180860 AT4G00730.1 23.333 540 309 19 15 475 137 650 1.07e-19 94.7
Msa1180860 AT4G04890.2 23.413 504 286 20 196 668 302 736 8.20e-18 88.6
Msa1180860 AT4G04890.1 23.413 504 286 20 196 668 302 736 8.20e-18 88.6
Msa1180860 AT1G05230.3 21.095 493 297 14 196 668 295 715 2.68e-13 73.9
Msa1180860 AT1G05230.8 20.892 493 300 14 196 668 295 717 1.49e-12 71.6
Msa1180860 AT1G05230.4 20.892 493 300 14 196 668 295 717 1.49e-12 71.6
Msa1180860 AT1G05230.9 20.892 493 300 14 196 668 295 717 1.49e-12 71.6
Msa1180860 AT1G05230.10 20.892 493 300 14 196 668 295 717 1.49e-12 71.6
Msa1180860 AT1G05230.7 20.892 493 300 14 196 668 295 717 1.49e-12 71.6
Msa1180860 AT1G05230.11 20.892 493 300 14 196 668 295 717 1.49e-12 71.6
Msa1180860 AT1G05230.2 20.892 493 300 14 196 668 295 717 1.49e-12 71.6
Msa1180860 AT1G05230.6 20.892 493 300 14 196 668 295 717 1.49e-12 71.6
Msa1180860 AT1G05230.5 20.892 493 300 14 196 668 295 717 1.49e-12 71.6
Msa1180860 AT1G05230.1 20.892 493 300 14 196 668 295 717 1.49e-12 71.6
Msa1180860 AT1G73360.1 28.287 251 135 10 15 237 35 268 5.84e-11 66.2
Msa1180860 AT3G61150.1 31.387 137 71 4 7 143 105 218 7.18e-11 66.2

Find 214 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGAAGACAACAACTTATT+AGG 0.174771 8_1:+15100406 Msa1180860:CDS
CGTATGTAATAAGGTTATTC+AGG 0.234761 8_1:-15105658 None:intergenic
TGGCACCTGCTCGCGACTTT+TGG 0.235961 8_1:+15102736 Msa1180860:CDS
GCTACAAGGGCCAACTTTAA+TGG 0.244448 8_1:-15104359 None:intergenic
AAAGGTTTCCGTATGTAATA+AGG 0.257997 8_1:-15105667 None:intergenic
AGCAGAGAAAAGAGTCTTTC+AGG 0.266533 8_1:+15101192 Msa1180860:CDS
TTCATCACCTGACAAGTTAA+TGG 0.282278 8_1:+15103716 Msa1180860:CDS
GTTGGCCCTTGTAGCTTAAC+TGG 0.282373 8_1:+15104367 Msa1180860:CDS
CTCCATCAACAGCTTATTCA+TGG 0.283034 8_1:-15101243 None:intergenic
CTTCGAATTGAACTTGGTTT+AGG 0.284511 8_1:-15100390 None:intergenic
CGTATCATCCCTCTTGAATC+TGG 0.289816 8_1:+15105157 Msa1180860:CDS
ATTGGATCTGCAACAGTTAT+AGG 0.295090 8_1:+15105579 Msa1180860:CDS
GCCGATAGATAAGGCTATTT+TGG 0.303910 8_1:+15100003 None:intergenic
CTGCAGGACTTGCATCCCTT+GGG 0.308926 8_1:-15101876 None:intergenic
AACCAAGACAAATCAAAGTT+TGG 0.310921 8_1:+15100454 Msa1180860:CDS
AATAAGCACTTAATGGATAA+TGG 0.320902 8_1:+15100306 Msa1180860:CDS
GTGCTTATTACCATCCTTGC+AGG 0.321255 8_1:-15100292 None:intergenic
GGATGGTAATAAGCACTTAA+TGG 0.322988 8_1:+15100299 Msa1180860:CDS
TGACTCACAACTCGTGTCTT+TGG 0.332611 8_1:-15101812 None:intergenic
TGAGCAAGGGTTTGTGCCTC+AGG 0.333658 8_1:-15105557 None:intergenic
TCGAAGACAACAACTTATTA+GGG 0.339115 8_1:+15100407 Msa1180860:CDS
AGTGATAATGCTGGAAATTC+TGG 0.341985 8_1:+15105350 Msa1180860:CDS
ATACCTTCATTCCAGGCATT+TGG 0.342067 8_1:-15102086 None:intergenic
CTCCTTCACAAGGTCTTATC+AGG 0.342292 8_1:-15103042 None:intergenic
CCTGCAGGACTTGCATCCCT+TGG 0.343323 8_1:-15101877 None:intergenic
TATAGTGGACGCAGTACTTC+TGG 0.345373 8_1:-15103201 None:intergenic
TCTCTGGCCATCATTTCTTC+AGG 0.345556 8_1:-15104581 None:intergenic
GCCCTTGACATTGGCCCTAC+TGG 0.345949 8_1:+15105314 Msa1180860:CDS
TACAGGCTTTACGTCATCTA+AGG 0.346410 8_1:+15103433 Msa1180860:intron
TCTTGAGATACCTTCATTCC+AGG 0.353242 8_1:-15102093 None:intergenic
AAGTTTGGTTTCAGAATAGA+AGG 0.353326 8_1:+15100469 Msa1180860:CDS
ATAAGGTGGTACAGCTACTA+TGG 0.355078 8_1:+15100269 Msa1180860:exon
CAAGGCATCAATGCTATTAC+AGG 0.357953 8_1:+15103797 Msa1180860:CDS
CTGTGTAAGCATCCATATTA+TGG 0.372634 8_1:-15104330 None:intergenic
CTGAATCTTTCCTTTGGCAA+TGG 0.387020 8_1:+15103741 Msa1180860:CDS
CATCCACATTGTTGATCATA+TGG 0.387385 8_1:+15103075 Msa1180860:CDS
GGATCTCGCGTAGGAAATTA+CGG 0.391373 8_1:+15104388 Msa1180860:CDS
TCAGGTTGCAAGGTGTGAAT+AGG 0.391944 8_1:+15101210 Msa1180860:CDS
TTAATCTAGTTAATTGTTTG+AGG 0.399825 8_1:-15100213 None:intergenic
AGAATGGGCAGACCATAATA+TGG 0.399984 8_1:+15104318 Msa1180860:CDS
AACCAAACTTTGATTTGTCT+TGG 0.401297 8_1:-15100456 None:intergenic
CTAAGTGCTCGCAGAGCTGC+TGG 0.408684 8_1:-15103507 None:intergenic
ATGGGTCTGAATCTTTCCTT+TGG 0.411939 8_1:+15103735 Msa1180860:CDS
TCCTAAAAGATCGTCCTTTG+TGG 0.414014 8_1:+15102517 Msa1180860:CDS
CCATCATTTCTTCAGGAGAA+TGG 0.415643 8_1:-15104574 None:intergenic
GCATGTGAACTCAGATTAGA+AGG 0.416254 8_1:-15105509 None:intergenic
GAATTTCTTTCAAAGGCTAC+TGG 0.419741 8_1:+15102045 Msa1180860:CDS
ATACTAACCGGCTCAATCTC+TGG 0.425078 8_1:-15103530 None:intergenic
ATATAATACTGCGAACATAT+TGG 0.427160 8_1:-15105454 None:intergenic
CATTGTTGATCATATGGACT+TGG 0.428519 8_1:+15103081 Msa1180860:CDS
GTTTCTCAGCCCAATGTCAC+TGG 0.430041 8_1:+15103471 Msa1180860:CDS
TTCAGACCCATTAACTTGTC+AGG 0.430051 8_1:-15103723 None:intergenic
TCAAGAGCTTCAACCTGCTC+AGG 0.430316 8_1:-15100348 None:intergenic
CCAAGGGATGCAAGTCCTGC+AGG 0.431428 8_1:+15101877 Msa1180860:CDS
AGGCACAAACCCTTGCTCAT+TGG 0.433054 8_1:+15105561 Msa1180860:CDS
CTCAATGGATTTACTGATGA+AGG 0.445576 8_1:+15103642 Msa1180860:CDS
TCATCACCTGACAAGTTAAT+GGG 0.446259 8_1:+15103717 Msa1180860:CDS
CATCATTTCTTCAGGAGAAT+GGG 0.448210 8_1:-15104573 None:intergenic
TATGTTCACGCAGGAACCTT+AGG 0.448822 8_1:-15104291 None:intergenic
AGCAAGAGCTTGTGGTCTAG+TGG 0.450671 8_1:+15102384 Msa1180860:CDS
CCCACACACACAGTAACTTA+GGG 0.451294 8_1:+15100118 Msa1180860:five_prime_UTR
TGTGGCACAGGAGGCATGCT+TGG 0.453662 8_1:-15102986 None:intergenic
TCAGCAAATGAAGCATCAAT+TGG 0.455580 8_1:-15105106 None:intergenic
ACCCACACACACAGTAACTT+AGG 0.456349 8_1:+15100117 Msa1180860:five_prime_UTR
TGCTAAAGTTTCTTCTGCAA+TGG 0.458146 8_1:-15102022 None:intergenic
CTTCCCCACCCAGTGACATT+GGG 0.458697 8_1:-15103480 None:intergenic
TATTGAGCTGCTTTATATGC+AGG 0.461758 8_1:+15102599 Msa1180860:CDS
CTTGCATCTGCCCTTGACAT+TGG 0.463238 8_1:+15105305 Msa1180860:CDS
CGAAATCCAGAGGGTAGAAG+TGG 0.468647 8_1:-15105136 None:intergenic
TCTTCCCCACCCAGTGACAT+TGG 0.470531 8_1:-15103481 None:intergenic
GTCTTCTGAGCCAGCACCAT+CGG 0.476703 8_1:-15103231 None:intergenic
TTTAGCAGAATTTCTTTCAA+AGG 0.476915 8_1:+15102038 Msa1180860:CDS
GCTGGCTCAGAAGACTACTA+TGG 0.477145 8_1:+15103239 Msa1180860:CDS
CAGCCCAATGTCACTGGGTG+GGG 0.478064 8_1:+15103477 Msa1180860:CDS
GGTTTCAATGAGGCACTCAA+TGG 0.478467 8_1:+15103627 Msa1180860:CDS
GCAAGATCAAGAGTGCGATT+AGG 0.482451 8_1:-15105287 None:intergenic
TGCAGGACTTGCATCCCTTG+GGG 0.482836 8_1:-15101875 None:intergenic
GTTGAGTGGGTCCAAATGCC+TGG 0.484697 8_1:+15102075 Msa1180860:CDS
CTGATATGGACAGCCTGGTC+CGG 0.485461 8_1:+15102315 Msa1180860:intron
TGTTGTCTTCGAATTGAACT+TGG 0.487679 8_1:-15100396 None:intergenic
CAGCATTATCACTTGATGCT+CGG 0.488270 8_1:-15105340 None:intergenic
ACAGCTGCTGCCATTAAAGT+TGG 0.491933 8_1:+15104349 Msa1180860:CDS
AAATGATAGGTTGCAGAAGC+AGG 0.492355 8_1:+15101268 Msa1180860:CDS
ATTCCAATGGAATCCGGACC+AGG 0.494411 8_1:-15102328 None:intergenic
GCTATTTCTCATGGTTGCAC+TGG 0.496228 8_1:+15102355 Msa1180860:CDS
GGTTCAATATTAGAAAGAAT+AGG 0.496315 8_1:-15100435 None:intergenic
TTGCAACAGAAACAATTCTC+TGG 0.496348 8_1:-15104597 None:intergenic
TCTAATCTGAGTTCACATGC+TGG 0.496973 8_1:+15105512 Msa1180860:CDS
AAAGTGCTAACGCTACCCTT+TGG 0.500197 8_1:-15105484 None:intergenic
TACTGGAACCGCTGTTGAGT+GGG 0.504776 8_1:+15102062 Msa1180860:CDS
TTGATGCTCGGTTTCCAGTA+GGG 0.507932 8_1:-15105328 None:intergenic
ATATGAATCACCGATGGTGC+TGG 0.508312 8_1:+15103221 Msa1180860:CDS
AGCCATGAATAAGCTGTTGA+TGG 0.508413 8_1:+15101241 Msa1180860:CDS
TACACTTCTGTTGTAGAAGA+TGG 0.508557 8_1:+15102768 Msa1180860:CDS
ATCAATCACACTCACCCTGC+AGG 0.508922 8_1:-15101892 None:intergenic
CGAGATCCAGTTAAGCTACA+AGG 0.509433 8_1:-15104373 None:intergenic
GGAATCGTCGCTATTTCTCA+TGG 0.511365 8_1:+15102346 Msa1180860:CDS
ATCAAGAGTGCGATTAGGAC+TGG 0.512797 8_1:-15105282 None:intergenic
CTAATCTGAGTTCACATGCT+GGG 0.513411 8_1:+15105513 Msa1180860:CDS
CCATTCTCCTGAAGAAATGA+TGG 0.515783 8_1:+15104574 Msa1180860:CDS
GGTCCAAATGCCTGGAATGA+AGG 0.515906 8_1:+15102083 Msa1180860:CDS
ACCATCGGTGATTCATATAG+TGG 0.517896 8_1:-15103216 None:intergenic
GCGTGAACATAGATCAGAAT+GGG 0.519247 8_1:+15104303 Msa1180860:CDS
CTTGATGCTCGGTTTCCAGT+AGG 0.520139 8_1:-15105329 None:intergenic
TCTCACCTCGTGTATGAGAA+TGG 0.523269 8_1:+15101293 Msa1180860:CDS
TTCCAGTAGGGCCAATGTCA+AGG 0.524338 8_1:-15105316 None:intergenic
TGTTGATCATATGGACTTGG+AGG 0.525009 8_1:+15103084 Msa1180860:CDS
CAGCCTGGTCCGGATTCCAT+TGG 0.526878 8_1:+15102325 Msa1180860:intron
ATGATCAACAATGTGGATGA+TGG 0.527724 8_1:-15103071 None:intergenic
GATCTCGCGTAGGAAATTAC+GGG 0.527880 8_1:+15104389 Msa1180860:CDS
GCTACTATGGCCTGCAAGGA+TGG 0.529224 8_1:+15100282 Msa1180860:exon
TGTTGATGGAGGAAAATGAT+AGG 0.529771 8_1:+15101255 Msa1180860:CDS
TGCCTCCAGCCATTCTCCTA+AGG 0.530016 8_1:+15104275 Msa1180860:CDS
AATCTGAGAAACGGTGTCGT+TGG 0.530554 8_1:-15100166 None:intergenic
GCGACGATTCCAATGGAATC+CGG 0.530819 8_1:-15102334 None:intergenic
GGTACGTGTCTTGCTGAGGC+TGG 0.531704 8_1:+15105600 Msa1180860:exon
TTGGTAGCTCTGCAGTGGAA+TGG 0.533406 8_1:+15105042 Msa1180860:intron
GCTCAATAGTGTGTGCTAGC+GGG 0.534034 8_1:-15104426 None:intergenic
GGAATGGATGAGAATGCTAT+TGG 0.534330 8_1:+15105058 Msa1180860:CDS
GATGCCCCACTTCTACCCTC+TGG 0.535941 8_1:+15105130 Msa1180860:CDS
AGCAGGTTGAAGCTCTTGAA+AGG 0.536769 8_1:+15100352 Msa1180860:CDS
TTGGAAGTTATTAAGTTGGA+CGG 0.536877 8_1:+15104545 Msa1180860:CDS
CGAGCATCAAGTGATAATGC+TGG 0.543560 8_1:+15105341 Msa1180860:CDS
GCTCTAACAAAATGTGGCAC+AGG 0.544412 8_1:-15102998 None:intergenic
CGAGCAGGTGCCAATGTGGT+TGG 0.545131 8_1:-15102726 None:intergenic
TGAGTTCACATGCTGGGCTG+AGG 0.546668 8_1:+15105519 Msa1180860:CDS
TCAGCCCAATGTCACTGGGT+GGG 0.546882 8_1:+15103476 Msa1180860:CDS
CTGTAATAGCATTGATGCCT+TGG 0.547972 8_1:-15103796 None:intergenic
AGCAAATATAAGTTCTGCAC+AGG 0.548261 8_1:-15105083 None:intergenic
GCAGGACTTGCATCCCTTGG+GGG 0.548645 8_1:-15101874 None:intergenic
AACAACCAAAAGTCGCGAGC+AGG 0.550911 8_1:-15102741 None:intergenic
GAGCAAGGGTTTGTGCCTCA+GGG 0.553358 8_1:-15105556 None:intergenic
ACGCAGGAACCTTAGGAGAA+TGG 0.554205 8_1:-15104284 None:intergenic
TATTATATCATCAGTCCAAA+GGG 0.557286 8_1:+15105469 Msa1180860:CDS
CTCAGCCCAATGTCACTGGG+TGG 0.560247 8_1:+15103475 Msa1180860:CDS
AGGAACCTTAGGAGAATGGC+TGG 0.561926 8_1:-15104280 None:intergenic
AAAGAGTCTTTCAGGTTGCA+AGG 0.562032 8_1:+15101200 Msa1180860:CDS
AGTACTTCTGGAACGCTCCA+TGG 0.562310 8_1:-15103189 None:intergenic
CTGATAAGACCTTGTGAAGG+AGG 0.568786 8_1:+15103043 Msa1180860:CDS
TACAGCTACTATGGCCTGCA+AGG 0.569997 8_1:+15100278 Msa1180860:exon
TGCTCAATAGTGTGTGCTAG+CGG 0.571029 8_1:-15104427 None:intergenic
GCAAGAGAATGTAGCATGCA+TGG 0.572833 8_1:+15105427 Msa1180860:CDS
GCAAGAGCTTGTGGTCTAGT+GGG 0.580275 8_1:+15102385 Msa1180860:CDS
GAGCAGACATGCTGCCTAGT+GGG 0.581394 8_1:+15103017 Msa1180860:CDS
CTACTGGAACCGCTGTTGAG+TGG 0.586215 8_1:+15102061 Msa1180860:CDS
TAGTGGGACTAGAACCCACT+AGG 0.586368 8_1:+15102401 Msa1180860:CDS
TGATGAAGGATGGACAATGA+TGG 0.587248 8_1:+15103656 Msa1180860:CDS
TTTCTCAGCCCAATGTCACT+GGG 0.588485 8_1:+15103472 Msa1180860:CDS
ATCTAGTTAATTGTTTGAGG+AGG 0.588926 8_1:-15100210 None:intergenic
TCCAGTAGGGCCAATGTCAA+GGG 0.589155 8_1:-15105315 None:intergenic
GTATTATATCATCAGTCCAA+AGG 0.589604 8_1:+15105468 Msa1180860:CDS
CACTTAGCCAGAGATTGAGC+CGG 0.590279 8_1:+15103523 Msa1180860:CDS
ATGGATTTACTGATGAAGGA+TGG 0.595578 8_1:+15103646 Msa1180860:CDS
TGTACGTTATACACCTGAGC+AGG 0.597312 8_1:+15100335 Msa1180860:CDS
TGTTGCAGATCCAATGAGCA+AGG 0.597888 8_1:-15105571 None:intergenic
GCTTTATGCACCAACCACAT+TGG 0.599013 8_1:+15102716 Msa1180860:intron
AGAAATAGCGACGATTCCAA+TGG 0.599267 8_1:-15102341 None:intergenic
TGTTTGCAGGGGTTTCAATG+AGG 0.601250 8_1:+15103617 Msa1180860:intron
ATAAGACCTTGTGAAGGAGG+TGG 0.601925 8_1:+15103046 Msa1180860:CDS
AATAGTTCCACCGCTAGCAG+TGG 0.607297 8_1:-15102580 None:intergenic
TCTGGACCACTTACCCTAGT+GGG 0.608488 8_1:-15102415 None:intergenic
CAAGGGATGCAAGTCCTGCA+GGG 0.611498 8_1:+15101878 Msa1180860:CDS
AACACAGCATTACTGACAGA+AGG 0.611683 8_1:-15103768 None:intergenic
CTAACAAAATGTGGCACAGG+AGG 0.612984 8_1:-15102995 None:intergenic
AATGTGCTGCCCACTGCTAG+CGG 0.616645 8_1:+15102570 Msa1180860:CDS
ATGTCTGCTCTAACAAAATG+TGG 0.616648 8_1:-15103004 None:intergenic
ACCCTAAGTTACTGTGTGTG+TGG 0.616939 8_1:-15100119 None:intergenic
GGTGTCGCAGCAAGAGCTTG+TGG 0.617510 8_1:+15102376 Msa1180860:CDS
GATGAAGGATGGACAATGAT+GGG 0.617941 8_1:+15103657 Msa1180860:CDS
TATAGGTACGTGTCTTGCTG+AGG 0.623425 8_1:+15105596 Msa1180860:CDS
ATAGTTCCACCGCTAGCAGT+GGG 0.625406 8_1:-15102579 None:intergenic
AGCAAGGGTTTGTGCCTCAG+GGG 0.625642 8_1:-15105555 None:intergenic
GAAATCCAGAGGGTAGAAGT+GGG 0.626534 8_1:-15105135 None:intergenic
CATGAATAAGCTGTTGATGG+AGG 0.627357 8_1:+15101244 Msa1180860:CDS
AGAAGGAAATCCATTGCCAA+AGG 0.629899 8_1:-15103751 None:intergenic
GGTCTTATCAGGTACCCACT+AGG 0.630106 8_1:-15103031 None:intergenic
GTGCTGCCCACTGCTAGCGG+TGG 0.632331 8_1:+15102573 Msa1180860:CDS
TGCGTGAACATAGATCAGAA+TGG 0.632509 8_1:+15104302 Msa1180860:CDS
GTTGCAGATCCAATGAGCAA+GGG 0.634819 8_1:-15105570 None:intergenic
AGACACGAGTTGTGAGTCAG+TGG 0.635890 8_1:+15101816 Msa1180860:CDS
AATGAAATGAAATGAAAGTG+CGG 0.636028 8_1:-15100067 None:intergenic
AGCACACACTATTGAGCATG+AGG 0.637565 8_1:+15104432 Msa1180860:CDS
ATCTGGACCACTTACCCTAG+TGG 0.637854 8_1:-15102416 None:intergenic
CCCTAAGTTACTGTGTGTGT+GGG 0.638778 8_1:-15100118 None:intergenic
GCTGGGCTGAGGTCACCGCT+AGG 0.640780 8_1:+15105530 Msa1180860:CDS
AGAGCAGACATGCTGCCTAG+TGG 0.643425 8_1:+15103016 Msa1180860:CDS
TGGACAATGATGGGCAATGA+CGG 0.644598 8_1:+15103666 Msa1180860:CDS
CATTGACAATATCAACAGCT+CGG 0.648913 8_1:-15102551 None:intergenic
GTCGCGAGCAGGTGCCAATG+TGG 0.649892 8_1:-15102730 None:intergenic
TAATGCTGTGTTATGTGCCA+AGG 0.650005 8_1:+15103779 Msa1180860:CDS
ATGGAACCACCTCCTTCACA+AGG 0.652482 8_1:-15103052 None:intergenic
GAGATCCAGTTAAGCTACAA+GGG 0.653186 8_1:-15104372 None:intergenic
AGCTTAACTGGATCTCGCGT+AGG 0.653798 8_1:+15104379 Msa1180860:CDS
TCCACTATATGAATCACCGA+TGG 0.655585 8_1:+15103215 Msa1180860:CDS
TGTGAGTCAGTGGTGACTAG+TGG 0.658501 8_1:+15101826 Msa1180860:CDS
AGGGATGATACGAAATCCAG+AGG 0.676709 8_1:-15105146 None:intergenic
GTGTGCCTTAGATCTGTGAG+AGG 0.677270 8_1:+15102939 Msa1180860:intron
ATCTCGCGTAGGAAATTACG+GGG 0.678972 8_1:+15104390 Msa1180860:CDS
GGCTCAGAAGACTACTATGG+CGG 0.682781 8_1:+15103242 Msa1180860:CDS
TACCTGATAAGACCTTGTGA+AGG 0.684274 8_1:+15103040 Msa1180860:CDS
TGTAGAAGATGGCAGCCTAG+TGG 0.684422 8_1:+15102779 Msa1180860:CDS
GGGATGATACGAAATCCAGA+GGG 0.685666 8_1:-15105145 None:intergenic
AGTCCATATGATCAACAATG+TGG 0.687782 8_1:-15103078 None:intergenic
CGGCAATCACGAAACCACAA+AGG 0.688045 8_1:-15102531 None:intergenic
TGTGCCTCAGGGGTTCCTAG+CGG 0.689894 8_1:-15105545 None:intergenic
AAATCCAGAGGGTAGAAGTG+GGG 0.695513 8_1:-15105134 None:intergenic
AGTGGGACTAGAACCCACTA+GGG 0.698187 8_1:+15102402 Msa1180860:CDS
ATTCTGATCTATGTTCACGC+AGG 0.699759 8_1:-15104300 None:intergenic
ACACACTATTGAGCATGAGG+AGG 0.703064 8_1:+15104435 Msa1180860:CDS
CATTTGGACCCACTCAACAG+CGG 0.709948 8_1:-15102070 None:intergenic
AACCTTAGGAGAATGGCTGG+AGG 0.716615 8_1:-15104277 None:intergenic
AATAGCCATTCTCATACACG+AGG 0.748291 8_1:-15101298 None:intergenic
GTCACCGCTAGGAACCCCTG+AGG 0.761147 8_1:+15105541 Msa1180860:CDS
TCTCGCGTAGGAAATTACGG+GGG 0.824268 8_1:+15104391 Msa1180860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAATAAATTTATAAAAA+TGG + chr8_1:15101027-15101046 Msa1180860:intron 0.0%
!! TATTATAATACTTCAAAATT+AGG + chr8_1:15104831-15104850 Msa1180860:intron 10.0%
!! TGATTATGTAAAATTGATTA+TGG + chr8_1:15100805-15100824 Msa1180860:intron 15.0%
!! TAATGTAACTAATAACTAAT+GGG - chr8_1:15102136-15102155 None:intergenic 15.0%
!! ATAATGTAACTAATAACTAA+TGG - chr8_1:15102137-15102156 None:intergenic 15.0%
!! CATTATTTAATAAAACAAAC+TGG + chr8_1:15102151-15102170 Msa1180860:intron 15.0%
!! AAAACAATTTATAATGCATA+TGG + chr8_1:15102625-15102644 Msa1180860:intron 15.0%
!! ATCTAATCAATTACAAATTT+AGG - chr8_1:15102827-15102846 None:intergenic 15.0%
!! TATAATTAAGAAAATTCTAG+AGG - chr8_1:15105236-15105255 None:intergenic 15.0%
!!! ATAGCAATGATATATTTTAT+AGG + chr8_1:15105253-15105272 Msa1180860:intron 15.0%
!!! ATATTTTAATATGATACAAG+TGG + chr8_1:15105629-15105648 Msa1180860:three_prime_UTR 15.0%
!!! TATTTTAATATGATACAAGT+GGG + chr8_1:15105630-15105649 Msa1180860:three_prime_UTR 15.0%
!!! ATTTTTTTGAATCTGAGAAA+CGG - chr8_1:15100178-15100197 None:intergenic 20.0%
!! TTAATCTAGTTAATTGTTTG+AGG - chr8_1:15100216-15100235 None:intergenic 20.0%
!!! TTTTGGTTAGAAGAAAAATA+AGG + chr8_1:15100252-15100271 Msa1180860:five_prime_UTR 20.0%
!! ATGGTAAAGTAGTTTATATT+TGG - chr8_1:15100708-15100727 None:intergenic 20.0%
!!! TCTAAAATTGATTTGTTGAA+TGG - chr8_1:15100727-15100746 None:intergenic 20.0%
!!! TTATGTTTGTGATTAAGTTT+TGG + chr8_1:15101117-15101136 Msa1180860:intron 20.0%
!!! AGAACATAAACTTACATTTT+GGG - chr8_1:15101336-15101355 None:intergenic 20.0%
!!! AAGAACATAAACTTACATTT+TGG - chr8_1:15101337-15101356 None:intergenic 20.0%
!!! TCTGTTTAGTTTTTTCTATT+AGG + chr8_1:15101377-15101396 Msa1180860:intron 20.0%
!!! CTGTTTAGTTTTTTCTATTA+GGG + chr8_1:15101378-15101397 Msa1180860:intron 20.0%
!!! AATACAGTTTTAATATTGTC+TGG + chr8_1:15101605-15101624 Msa1180860:intron 20.0%
!!! TGTGTATTTAGATTCTTTTA+CGG + chr8_1:15101669-15101688 Msa1180860:intron 20.0%
!!! ATAACTTGTTTGTGTATATA+TGG + chr8_1:15101949-15101968 Msa1180860:intron 20.0%
!! TATCTCAAGAATTATTTCAT+TGG + chr8_1:15102106-15102125 Msa1180860:intron 20.0%
!! TCAGAATTAAAGAAGATTAT+TGG - chr8_1:15102226-15102245 None:intergenic 20.0%
!! TCTCTTAAAAATACTCAAAA+TGG + chr8_1:15102962-15102981 Msa1180860:CDS 20.0%
!!! TTTTTTTTAGACAATTACTC+AGG + chr8_1:15103885-15103904 Msa1180860:intron 20.0%
!! TATATGGTTTGAACTAATTA+AGG + chr8_1:15104790-15104809 Msa1180860:intron 20.0%
! AGAAGAAAAAGAGAAGATAT+TGG - chr8_1:15100034-15100053 None:intergenic 25.0%
! AATGAAATGAAATGAAAGTG+CGG - chr8_1:15100070-15100089 None:intergenic 25.0%
!! AATAAGCACTTAATGGATAA+TGG + chr8_1:15100306-15100325 Msa1180860:CDS 25.0%
! GGTTCAATATTAGAAAGAAT+AGG - chr8_1:15100438-15100457 None:intergenic 25.0%
! TAACCAAACATAGACTAAAA+AGG - chr8_1:15100513-15100532 None:intergenic 25.0%
!!! AGAATTGATTTTGACATGTT+TGG + chr8_1:15100543-15100562 Msa1180860:intron 25.0%
!!! GTTAGTTTTAACTTGAAGTT+AGG + chr8_1:15100609-15100628 Msa1180860:intron 25.0%
!! TCAATTTTTGTCACACAATT+TGG + chr8_1:15100750-15100769 Msa1180860:intron 25.0%
! TGTAAGATGTAGAATAGATT+CGG - chr8_1:15100942-15100961 None:intergenic 25.0%
! AATTGTGGCTTATTTAAAAG+TGG + chr8_1:15100973-15100992 Msa1180860:intron 25.0%
! AGTTGTCTTAAATGTATGTT+TGG - chr8_1:15101001-15101020 None:intergenic 25.0%
! CAGTTAAAACACATAAACAA+AGG - chr8_1:15101062-15101081 None:intergenic 25.0%
!!! TTTAGTTTTTTCTATTAGGG+AGG + chr8_1:15101381-15101400 Msa1180860:intron 25.0%
! ATCTAAATACACATCCAAAT+GGG - chr8_1:15101662-15101681 None:intergenic 25.0%
! AATCTAAATACACATCCAAA+TGG - chr8_1:15101663-15101682 None:intergenic 25.0%
!! CTTTTTCTTTTACCTTTTTC+AGG + chr8_1:15101992-15102011 Msa1180860:intron 25.0%
! TTTAGCAGAATTTCTTTCAA+AGG + chr8_1:15102038-15102057 Msa1180860:CDS 25.0%
! AAACTGTAAAATTGTCATCT+TGG + chr8_1:15102179-15102198 Msa1180860:intron 25.0%
! AACTGTAAAATTGTCATCTT+GGG + chr8_1:15102180-15102199 Msa1180860:intron 25.0%
! ATATCAGCAAAATTAACAAC+AGG - chr8_1:15102302-15102321 None:intergenic 25.0%
!! TGTTGTTAATTTTGCTGATA+TGG + chr8_1:15102301-15102320 Msa1180860:intron 25.0%
! AATAATAGAGATTGCAAATC+TGG - chr8_1:15102436-15102455 None:intergenic 25.0%
!! TGTTGTATTTCTTTTACTGA+TGG + chr8_1:15103271-15103290 Msa1180860:intron 25.0%
! TTCCTATTTAAGTCTAGATT+AGG + chr8_1:15103324-15103343 Msa1180860:intron 25.0%
! TTCCTAATCTAGACTTAAAT+AGG - chr8_1:15103329-15103348 None:intergenic 25.0%
!! AACAATAATATTGACTAGTG+TGG + chr8_1:15103370-15103389 Msa1180860:intron 25.0%
! TTACACTTCACAAATAAATG+TGG + chr8_1:15103582-15103601 Msa1180860:intron 25.0%
! ATAATATGGATGCAACAAAT+AGG - chr8_1:15104119-15104138 None:intergenic 25.0%
! TAGAACTTAAAATGAACCAT+TGG - chr8_1:15104221-15104240 None:intergenic 25.0%
! ACTTAATAACTTCCAAAAAC+TGG - chr8_1:15104541-15104560 None:intergenic 25.0%
!!! GTTTTTGGAAGTTATTAAGT+TGG + chr8_1:15104541-15104560 Msa1180860:intron 25.0%
!! TTTTTCTTCCTCATATTGTT+CGG + chr8_1:15104628-15104647 Msa1180860:intron 25.0%
!!! TATATCTAGCTAGTTTTACT+CGG + chr8_1:15104906-15104925 Msa1180860:intron 25.0%
! AATCATCACATTAAAACAGA+AGG - chr8_1:15104969-15104988 None:intergenic 25.0%
!!! TAACTCACTTTATGTTGTTT+TGG + chr8_1:15105023-15105042 Msa1180860:intron 25.0%
!! TTAAGAAAATTCTAGAGGAA+AGG - chr8_1:15105231-15105250 None:intergenic 25.0%
! ATATAATACTGCGAACATAT+TGG - chr8_1:15105457-15105476 None:intergenic 25.0%
! TATTATATCATCAGTCCAAA+GGG + chr8_1:15105469-15105488 Msa1180860:CDS 25.0%
GAAAAAGAGAAGATATTGGT+TGG - chr8_1:15100030-15100049 None:intergenic 30.0%
ATCTAGTTAATTGTTTGAGG+AGG - chr8_1:15100213-15100232 None:intergenic 30.0%
TGGTTAGAAGAAAAATAAGG+TGG + chr8_1:15100255-15100274 Msa1180860:five_prime_UTR 30.0%
TTCGAAGACAACAACTTATT+AGG + chr8_1:15100406-15100425 Msa1180860:CDS 30.0%
TCGAAGACAACAACTTATTA+GGG + chr8_1:15100407-15100426 Msa1180860:CDS 30.0%
AACCAAGACAAATCAAAGTT+TGG + chr8_1:15100454-15100473 Msa1180860:CDS 30.0%
!! AACCAAACTTTGATTTGTCT+TGG - chr8_1:15100459-15100478 None:intergenic 30.0%
! AAGTTTGGTTTCAGAATAGA+AGG + chr8_1:15100469-15100488 Msa1180860:CDS 30.0%
!! CAACCTTTTTAGTCTATGTT+TGG + chr8_1:15100507-15100526 Msa1180860:intron 30.0%
!! TTGATTTTGACATGTTTGGT+TGG + chr8_1:15100547-15100566 Msa1180860:intron 30.0%
! TTTTGTCACACAATTTGGTT+CGG + chr8_1:15100755-15100774 Msa1180860:intron 30.0%
!! CTTCAAGTTAGAACCAATTT+TGG + chr8_1:15100913-15100932 Msa1180860:intron 30.0%
!!! TAAGTTTTGGTGTTATGTTG+AGG + chr8_1:15101130-15101149 Msa1180860:intron 30.0%
!! TGTACTTTCAAAGTGCTTTT+GGG - chr8_1:15101575-15101594 None:intergenic 30.0%
! TGTGTTTTCGAACAAAAACA+TGG + chr8_1:15101631-15101650 Msa1180860:intron 30.0%
ACATTTACAGTAGTCTCATT+AGG - chr8_1:15101712-15101731 None:intergenic 30.0%
GTTTGTGTATATATGGCTAA+TGG + chr8_1:15101956-15101975 Msa1180860:intron 30.0%
CTCAAACATAAATGCTAATG+AGG - chr8_1:15102253-15102272 None:intergenic 30.0%
ACTTGAGTTTATGAATCATG+TGG + chr8_1:15102465-15102484 Msa1180860:intron 30.0%
GAAAATATAACAGTAGGACT+GGG - chr8_1:15102885-15102904 None:intergenic 30.0%
AGAAAATATAACAGTAGGAC+TGG - chr8_1:15102886-15102905 None:intergenic 30.0%
GGACTAGAAAATATAACAGT+AGG - chr8_1:15102891-15102910 None:intergenic 30.0%
ATGATTTAGACATGTGTTGT+AGG - chr8_1:15102912-15102931 None:intergenic 30.0%
!! ATTCTCTCTCTTTTTCATAC+AGG + chr8_1:15103416-15103435 Msa1180860:intron 30.0%
CTAACTACTATGCAAAGAAA+AGG - chr8_1:15103971-15103990 None:intergenic 30.0%
! CTTTTCTTTGCATAGTAGTT+AGG + chr8_1:15103969-15103988 Msa1180860:intron 30.0%
CAACAAATAGGCATGTTAAA+GGG - chr8_1:15104107-15104126 None:intergenic 30.0%
AGCAAAGGACAGAAATAATA+TGG - chr8_1:15104133-15104152 None:intergenic 30.0%
! ATTCCGTATGTACTAACTTT+TGG + chr8_1:15104505-15104524 Msa1180860:intron 30.0%
AAGCCAAAAGTTAGTACATA+CGG - chr8_1:15104511-15104530 None:intergenic 30.0%
!! TTGGAAGTTATTAAGTTGGA+CGG + chr8_1:15104545-15104564 Msa1180860:CDS 30.0%
GAGTACAAATCAATATGACA+AGG - chr8_1:15104694-15104713 None:intergenic 30.0%
!! CACATTTTCTAGAGATCTTA+AGG + chr8_1:15104735-15104754 Msa1180860:intron 30.0%
ATATAGACAGCACAATTACA+GGG - chr8_1:15104775-15104794 None:intergenic 30.0%
CTAGCTAGATATATTGACAT+TGG - chr8_1:15104899-15104918 None:intergenic 30.0%
GATGATTCCTAAGACATATT+TGG + chr8_1:15104982-15105001 Msa1180860:intron 30.0%
ATCACAACCAAATATGTCTT+AGG - chr8_1:15104992-15105011 None:intergenic 30.0%
! TAACTTTTCCAGATTCAAGA+GGG - chr8_1:15105168-15105187 None:intergenic 30.0%
TACAAACAAACGAACTAGTT+TGG - chr8_1:15105204-15105223 None:intergenic 30.0%
GTATTATATCATCAGTCCAA+AGG + chr8_1:15105468-15105487 Msa1180860:CDS 30.0%
!!! AGCGCTTTTGATTTGTGTTT+TGG + chr8_1:15100235-15100254 Msa1180860:five_prime_UTR 35.0%
GGATGGTAATAAGCACTTAA+TGG + chr8_1:15100299-15100318 Msa1180860:CDS 35.0%
CTTCGAATTGAACTTGGTTT+AGG - chr8_1:15100393-15100412 None:intergenic 35.0%
TGTTGTCTTCGAATTGAACT+TGG - chr8_1:15100399-15100418 None:intergenic 35.0%
! TTTGTCACACAATTTGGTTC+GGG + chr8_1:15100756-15100775 Msa1180860:intron 35.0%
! CAAGTTAGAACCAATTTTGG+TGG + chr8_1:15100916-15100935 Msa1180860:intron 35.0%
TACACCTCTTGAATCAATTG+TGG + chr8_1:15100958-15100977 Msa1180860:intron 35.0%
! TAAGCCACAATTGATTCAAG+AGG - chr8_1:15100965-15100984 None:intergenic 35.0%
! TGTTGATGGAGGAAAATGAT+AGG + chr8_1:15101255-15101274 Msa1180860:CDS 35.0%
TTTCCTATGTAGAACTGACA+TGG + chr8_1:15101408-15101427 Msa1180860:intron 35.0%
! ACACCTTCAATTAGAAGTGT+TGG + chr8_1:15101527-15101546 Msa1180860:intron 35.0%
!! GTACTTTCAAAGTGCTTTTG+GGG - chr8_1:15101574-15101593 None:intergenic 35.0%
!! GTGTACTTTCAAAGTGCTTT+TGG - chr8_1:15101576-15101595 None:intergenic 35.0%
! GCACTTTGAAAGTACACATT+CGG + chr8_1:15101579-15101598 Msa1180860:intron 35.0%
AAAACATGGTTTCTCCCATT+TGG + chr8_1:15101645-15101664 Msa1180860:intron 35.0%
TGAGTATGCAAAGAAAGTGA+GGG - chr8_1:15101787-15101806 None:intergenic 35.0%
ATATATGGCTAATGGAATCC+TGG + chr8_1:15101964-15101983 Msa1180860:intron 35.0%
GTAAAAGAAAAAGAGAAGCC+AGG - chr8_1:15101985-15102004 None:intergenic 35.0%
AATGGACAAAAGCCTGAAAA+AGG - chr8_1:15102007-15102026 None:intergenic 35.0%
TGCTAAAGTTTCTTCTGCAA+TGG - chr8_1:15102025-15102044 None:intergenic 35.0%
GAATTTCTTTCAAAGGCTAC+TGG + chr8_1:15102045-15102064 Msa1180860:CDS 35.0%
CATTGACAATATCAACAGCT+CGG - chr8_1:15102554-15102573 None:intergenic 35.0%
! TATTGAGCTGCTTTATATGC+AGG + chr8_1:15102599-15102618 Msa1180860:CDS 35.0%
TACACTTCTGTTGTAGAAGA+TGG + chr8_1:15102768-15102787 Msa1180860:CDS 35.0%
ATGTCTGCTCTAACAAAATG+TGG - chr8_1:15103007-15103026 None:intergenic 35.0%
ATGATCAACAATGTGGATGA+TGG - chr8_1:15103074-15103093 None:intergenic 35.0%
CATCCACATTGTTGATCATA+TGG + chr8_1:15103075-15103094 Msa1180860:CDS 35.0%
AGTCCATATGATCAACAATG+TGG - chr8_1:15103081-15103100 None:intergenic 35.0%
CATTGTTGATCATATGGACT+TGG + chr8_1:15103081-15103100 Msa1180860:CDS 35.0%
! TGGAGGTACATTATTCAACT+TGG + chr8_1:15103101-15103120 Msa1180860:intron 35.0%
!! CTTGCTATTATTGATAGCCA+TGG + chr8_1:15103172-15103191 Msa1180860:intron 35.0%
! TTCTTTTACTGATGGTACAC+CGG + chr8_1:15103279-15103298 Msa1180860:intron 35.0%
CAAAACAAACGCATATATGC+CGG - chr8_1:15103301-15103320 None:intergenic 35.0%
! TATTGACTAGTGTGGTTGAA+AGG + chr8_1:15103378-15103397 Msa1180860:intron 35.0%
! AATCTGACATCTTGTTTGCA+GGG + chr8_1:15103605-15103624 Msa1180860:intron 35.0%
! CTCAATGGATTTACTGATGA+AGG + chr8_1:15103642-15103661 Msa1180860:CDS 35.0%
ATGGATTTACTGATGAAGGA+TGG + chr8_1:15103646-15103665 Msa1180860:CDS 35.0%
TTCATCACCTGACAAGTTAA+TGG + chr8_1:15103716-15103735 Msa1180860:CDS 35.0%
TCATCACCTGACAAGTTAAT+GGG + chr8_1:15103717-15103736 Msa1180860:CDS 35.0%
AGACAGTAAACGTTATGCAA+TGG - chr8_1:15103946-15103965 None:intergenic 35.0%
ATTGCATAACGTTTACTGTC+TGG + chr8_1:15103945-15103964 Msa1180860:intron 35.0%
TAGGCAAAACATGATTCAGA+GGG + chr8_1:15104056-15104075 Msa1180860:intron 35.0%
GCAACAAATAGGCATGTTAA+AGG - chr8_1:15104108-15104127 None:intergenic 35.0%
! TGTACCCCTATGAAAAGTAT+GGG + chr8_1:15104161-15104180 Msa1180860:intron 35.0%
CTGTGTAAGCATCCATATTA+TGG - chr8_1:15104333-15104352 None:intergenic 35.0%
! GGCTTAATTATGCCAGTTTT+TGG + chr8_1:15104526-15104545 Msa1180860:intron 35.0%
CATCATTTCTTCAGGAGAAT+GGG - chr8_1:15104576-15104595 None:intergenic 35.0%
TTGCAACAGAAACAATTCTC+TGG - chr8_1:15104600-15104619 None:intergenic 35.0%
ATCAATATGACAAGGAAACC+AGG - chr8_1:15104686-15104705 None:intergenic 35.0%
GATGTAACTATGCAAGTGTT+AGG - chr8_1:15104716-15104735 None:intergenic 35.0%
CATATAGACAGCACAATTAC+AGG - chr8_1:15104776-15104795 None:intergenic 35.0%
CTGTAATTGTGCTGTCTATA+TGG + chr8_1:15104774-15104793 Msa1180860:intron 35.0%
!!! GATGTTTTGATTTCAGACAC+AGG - chr8_1:15104875-15104894 None:intergenic 35.0%
AGCAAATATAAGTTCTGCAC+AGG - chr8_1:15105086-15105105 None:intergenic 35.0%
! TCAGCAAATGAAGCATCAAT+TGG - chr8_1:15105109-15105128 None:intergenic 35.0%
! CTAACTTTTCCAGATTCAAG+AGG - chr8_1:15105169-15105188 None:intergenic 35.0%
! AGTGATAATGCTGGAAATTC+TGG + chr8_1:15105350-15105369 Msa1180860:CDS 35.0%
ATTGGATCTGCAACAGTTAT+AGG + chr8_1:15105579-15105598 Msa1180860:CDS 35.0%
ATAAGGTGGTACAGCTACTA+TGG + chr8_1:15100269-15100288 Msa1180860:exon 40.0%
ATAGATTCGGCCACCAAAAT+TGG - chr8_1:15100929-15100948 None:intergenic 40.0%
AGCAGAGAAAAGAGTCTTTC+AGG + chr8_1:15101192-15101211 Msa1180860:CDS 40.0%
!! AAAGAGTCTTTCAGGTTGCA+AGG + chr8_1:15101200-15101219 Msa1180860:CDS 40.0%
AGCCATGAATAAGCTGTTGA+TGG + chr8_1:15101241-15101260 Msa1180860:CDS 40.0%
CTCCATCAACAGCTTATTCA+TGG - chr8_1:15101246-15101265 None:intergenic 40.0%
! CATGAATAAGCTGTTGATGG+AGG + chr8_1:15101244-15101263 Msa1180860:CDS 40.0%
AAATGATAGGTTGCAGAAGC+AGG + chr8_1:15101268-15101287 Msa1180860:CDS 40.0%
AATAGCCATTCTCATACACG+AGG - chr8_1:15101301-15101320 None:intergenic 40.0%
TGTCCATGTCAGTTCTACAT+AGG - chr8_1:15101414-15101433 None:intergenic 40.0%
GCACCAACACTTCTAATTGA+AGG - chr8_1:15101533-15101552 None:intergenic 40.0%
!! TTTCAAAGTGCTTTTGGGGA+GGG - chr8_1:15101570-15101589 None:intergenic 40.0%
CTGAGTATGCAAAGAAAGTG+AGG - chr8_1:15101788-15101807 None:intergenic 40.0%
CTCACTTTCTTTGCATACTC+AGG + chr8_1:15101786-15101805 Msa1180860:intron 40.0%
! GAGTGTGATTGATGGATACT+TGG + chr8_1:15101902-15101921 Msa1180860:intron 40.0%
ATACCTTCATTCCAGGCATT+TGG - chr8_1:15102089-15102108 None:intergenic 40.0%
TCTTGAGATACCTTCATTCC+AGG - chr8_1:15102096-15102115 None:intergenic 40.0%
AGAAATAGCGACGATTCCAA+TGG - chr8_1:15102344-15102363 None:intergenic 40.0%
TGGTCAAACATACACTTTCC+AGG + chr8_1:15102485-15102504 Msa1180860:intron 40.0%
!!! CTTTTAGGATTTCTGCAACC+TGG - chr8_1:15102506-15102525 None:intergenic 40.0%
TCCTAAAAGATCGTCCTTTG+TGG + chr8_1:15102517-15102536 Msa1180860:CDS 40.0%
! ACCACAAAGGACGATCTTTT+AGG - chr8_1:15102521-15102540 None:intergenic 40.0%
TACCTGATAAGACCTTGTGA+AGG + chr8_1:15103040-15103059 Msa1180860:CDS 40.0%
TGTTGATCATATGGACTTGG+AGG + chr8_1:15103084-15103103 Msa1180860:CDS 40.0%
TCCACTATATGAATCACCGA+TGG + chr8_1:15103215-15103234 Msa1180860:CDS 40.0%
ACCATCGGTGATTCATATAG+TGG - chr8_1:15103219-15103238 None:intergenic 40.0%
TAGTGTGGTTGAAAGGACTA+TGG + chr8_1:15103385-15103404 Msa1180860:intron 40.0%
TACAGGCTTTACGTCATCTA+AGG + chr8_1:15103433-15103452 Msa1180860:intron 40.0%
CCTTGGCAAAAGATACTAAC+CGG - chr8_1:15103545-15103564 None:intergenic 40.0%
! CGGTTAGTATCTTTTGCCAA+GGG + chr8_1:15103543-15103562 Msa1180860:intron 40.0%
! GGTTAGTATCTTTTGCCAAG+GGG + chr8_1:15103544-15103563 Msa1180860:intron 40.0%
! GTTAGTATCTTTTGCCAAGG+GGG + chr8_1:15103545-15103564 Msa1180860:intron 40.0%
! GAATCTGACATCTTGTTTGC+AGG + chr8_1:15103604-15103623 Msa1180860:intron 40.0%
! ATCTGACATCTTGTTTGCAG+GGG + chr8_1:15103606-15103625 Msa1180860:intron 40.0%
TGATGAAGGATGGACAATGA+TGG + chr8_1:15103656-15103675 Msa1180860:CDS 40.0%
GATGAAGGATGGACAATGAT+GGG + chr8_1:15103657-15103676 Msa1180860:CDS 40.0%
!! TTCAGACCCATTAACTTGTC+AGG - chr8_1:15103726-15103745 None:intergenic 40.0%
ATGGGTCTGAATCTTTCCTT+TGG + chr8_1:15103735-15103754 Msa1180860:CDS 40.0%
CTGAATCTTTCCTTTGGCAA+TGG + chr8_1:15103741-15103760 Msa1180860:CDS 40.0%
AGAAGGAAATCCATTGCCAA+AGG - chr8_1:15103754-15103773 None:intergenic 40.0%
AACACAGCATTACTGACAGA+AGG - chr8_1:15103771-15103790 None:intergenic 40.0%
TAATGCTGTGTTATGTGCCA+AGG + chr8_1:15103779-15103798 Msa1180860:CDS 40.0%
!! CTGTAATAGCATTGATGCCT+TGG - chr8_1:15103799-15103818 None:intergenic 40.0%
! CAAGGCATCAATGCTATTAC+AGG + chr8_1:15103797-15103816 Msa1180860:CDS 40.0%
CATCAATGCTATTACAGGTC+AGG + chr8_1:15103802-15103821 Msa1180860:intron 40.0%
ATAGAGACTTCCAAATGCCT+AGG + chr8_1:15104037-15104056 Msa1180860:intron 40.0%
! TCATGTTTTGCCTAGGCATT+TGG - chr8_1:15104050-15104069 None:intergenic 40.0%
! CTCTGAATCATGTTTTGCCT+AGG - chr8_1:15104057-15104076 None:intergenic 40.0%
CTAGGCAAAACATGATTCAG+AGG + chr8_1:15104055-15104074 Msa1180860:intron 40.0%
AGGCAAAACATGATTCAGAG+GGG + chr8_1:15104057-15104076 Msa1180860:intron 40.0%
!! TGATTCAGAGGGGTACTTAT+AGG + chr8_1:15104067-15104086 Msa1180860:intron 40.0%
!! GATTCAGAGGGGTACTTATA+GGG + chr8_1:15104068-15104087 Msa1180860:intron 40.0%
CTGTACCCCTATGAAAAGTA+TGG + chr8_1:15104160-15104179 Msa1180860:intron 40.0%
! TCTGGCCCATACTTTTCATA+GGG - chr8_1:15104169-15104188 None:intergenic 40.0%
GCAACTCATACAAATTCCTC+TGG - chr8_1:15104187-15104206 None:intergenic 40.0%
GTTGCATTGCACATATCCAA+TGG + chr8_1:15104202-15104221 Msa1180860:intron 40.0%
ATTCTGATCTATGTTCACGC+AGG - chr8_1:15104303-15104322 None:intergenic 40.0%
TGCGTGAACATAGATCAGAA+TGG + chr8_1:15104302-15104321 Msa1180860:CDS 40.0%
GCGTGAACATAGATCAGAAT+GGG + chr8_1:15104303-15104322 Msa1180860:CDS 40.0%
AGAATGGGCAGACCATAATA+TGG + chr8_1:15104318-15104337 Msa1180860:CDS 40.0%
GAGATCCAGTTAAGCTACAA+GGG - chr8_1:15104375-15104394 None:intergenic 40.0%
AGCATGAGGAGGTGATATAT+TGG + chr8_1:15104446-15104465 Msa1180860:intron 40.0%
CCATCATTTCTTCAGGAGAA+TGG - chr8_1:15104577-15104596 None:intergenic 40.0%
CCATTCTCCTGAAGAAATGA+TGG + chr8_1:15104574-15104593 Msa1180860:CDS 40.0%
GTCCATGCTTAACTCTCTTA+TGG + chr8_1:15104650-15104669 Msa1180860:intron 40.0%
GTCCATAAGAGAGTTAAGCA+TGG - chr8_1:15104655-15104674 None:intergenic 40.0%
! TTTTGAACTTCCGCTTCCAT+TGG + chr8_1:15104933-15104952 Msa1180860:intron 40.0%
GGAATGGATGAGAATGCTAT+TGG + chr8_1:15105058-15105077 Msa1180860:CDS 40.0%
CAGCATTATCACTTGATGCT+CGG - chr8_1:15105343-15105362 None:intergenic 40.0%
GCATGTGAACTCAGATTAGA+AGG - chr8_1:15105512-15105531 None:intergenic 40.0%
TCTAATCTGAGTTCACATGC+TGG + chr8_1:15105512-15105531 Msa1180860:CDS 40.0%
CTAATCTGAGTTCACATGCT+GGG + chr8_1:15105513-15105532 Msa1180860:CDS 40.0%
ACCCACACACACAGTAACTT+AGG + chr8_1:15100117-15100136 Msa1180860:five_prime_UTR 45.0%
CCCTAAGTTACTGTGTGTGT+GGG - chr8_1:15100121-15100140 None:intergenic 45.0%
CCCACACACACAGTAACTTA+GGG + chr8_1:15100118-15100137 Msa1180860:five_prime_UTR 45.0%
ACCCTAAGTTACTGTGTGTG+TGG - chr8_1:15100122-15100141 None:intergenic 45.0%
!! AATCTGAGAAACGGTGTCGT+TGG - chr8_1:15100169-15100188 None:intergenic 45.0%
GTGCTTATTACCATCCTTGC+AGG - chr8_1:15100295-15100314 None:intergenic 45.0%
TGTACGTTATACACCTGAGC+AGG + chr8_1:15100335-15100354 Msa1180860:CDS 45.0%
! AGCAGGTTGAAGCTCTTGAA+AGG + chr8_1:15100352-15100371 Msa1180860:CDS 45.0%
! TCAGGTTGCAAGGTGTGAAT+AGG + chr8_1:15101210-15101229 Msa1180860:CDS 45.0%
TCTCACCTCGTGTATGAGAA+TGG + chr8_1:15101293-15101312 Msa1180860:CDS 45.0%
!! CTTTCAAAGTGCTTTTGGGG+AGG - chr8_1:15101571-15101590 None:intergenic 45.0%
TGACTCACAACTCGTGTCTT+TGG - chr8_1:15101815-15101834 None:intergenic 45.0%
CTTGGTCACGTTCTGACATT+TGG + chr8_1:15101920-15101939 Msa1180860:intron 45.0%
! TTTTGCTGATATGGACAGCC+TGG + chr8_1:15102310-15102329 Msa1180860:intron 45.0%
!! GGAATCGTCGCTATTTCTCA+TGG + chr8_1:15102346-15102365 Msa1180860:CDS 45.0%
!! GCTATTTCTCATGGTTGCAC+TGG + chr8_1:15102355-15102374 Msa1180860:CDS 45.0%
! ATGTGGTTGGTGCATAAAGC+TGG - chr8_1:15102716-15102735 None:intergenic 45.0%
GCTTTATGCACCAACCACAT+TGG + chr8_1:15102716-15102735 Msa1180860:intron 45.0%
!!! TTTTAGAGCCACTTGCCACT+AGG - chr8_1:15102797-15102816 None:intergenic 45.0%
AGAGACCTCTCACAGATCTA+AGG - chr8_1:15102947-15102966 None:intergenic 45.0%
CTAACAAAATGTGGCACAGG+AGG - chr8_1:15102998-15103017 None:intergenic 45.0%
GCTCTAACAAAATGTGGCAC+AGG - chr8_1:15103001-15103020 None:intergenic 45.0%
! CTCCTTCACAAGGTCTTATC+AGG - chr8_1:15103045-15103064 None:intergenic 45.0%
CTGATAAGACCTTGTGAAGG+AGG + chr8_1:15103043-15103062 Msa1180860:CDS 45.0%
ATAAGACCTTGTGAAGGAGG+TGG + chr8_1:15103046-15103065 Msa1180860:CDS 45.0%
!! TATAGTGGACGCAGTACTTC+TGG - chr8_1:15103204-15103223 None:intergenic 45.0%
ATATGAATCACCGATGGTGC+TGG + chr8_1:15103221-15103240 Msa1180860:CDS 45.0%
AGAAGACTACTATGGCGGTA+TGG + chr8_1:15103247-15103266 Msa1180860:intron 45.0%
TTTCTCAGCCCAATGTCACT+GGG + chr8_1:15103472-15103491 Msa1180860:CDS 45.0%
! ATACTAACCGGCTCAATCTC+TGG - chr8_1:15103533-15103552 None:intergenic 45.0%
! CCGGTTAGTATCTTTTGCCA+AGG + chr8_1:15103542-15103561 Msa1180860:intron 45.0%
GAACAAAAATCATGCCCCCT+TGG - chr8_1:15103562-15103581 None:intergenic 45.0%
TGTTTGCAGGGGTTTCAATG+AGG + chr8_1:15103617-15103636 Msa1180860:intron 45.0%
! GGTTTCAATGAGGCACTCAA+TGG + chr8_1:15103627-15103646 Msa1180860:CDS 45.0%
!! TGGACAATGATGGGCAATGA+CGG + chr8_1:15103666-15103685 Msa1180860:CDS 45.0%
!! ACTTTTCATAGGGGTACAGC+AGG - chr8_1:15104159-15104178 None:intergenic 45.0%
! CTGGCCCATACTTTTCATAG+GGG - chr8_1:15104168-15104187 None:intergenic 45.0%
! CTCTGGCCCATACTTTTCAT+AGG - chr8_1:15104170-15104189 None:intergenic 45.0%
! CTATGAAAAGTATGGGCCAG+AGG + chr8_1:15104168-15104187 Msa1180860:intron 45.0%
TATGTTCACGCAGGAACCTT+AGG - chr8_1:15104294-15104313 None:intergenic 45.0%
ACAGCTGCTGCCATTAAAGT+TGG + chr8_1:15104349-15104368 Msa1180860:CDS 45.0%
GCTACAAGGGCCAACTTTAA+TGG - chr8_1:15104362-15104381 None:intergenic 45.0%
CGAGATCCAGTTAAGCTACA+AGG - chr8_1:15104376-15104395 None:intergenic 45.0%
GGATCTCGCGTAGGAAATTA+CGG + chr8_1:15104388-15104407 Msa1180860:CDS 45.0%
GATCTCGCGTAGGAAATTAC+GGG + chr8_1:15104389-15104408 Msa1180860:CDS 45.0%
ATCTCGCGTAGGAAATTACG+GGG + chr8_1:15104390-15104409 Msa1180860:CDS 45.0%
TGCTCAATAGTGTGTGCTAG+CGG - chr8_1:15104430-15104449 None:intergenic 45.0%
AGCACACACTATTGAGCATG+AGG + chr8_1:15104432-15104451 Msa1180860:CDS 45.0%
ACACACTATTGAGCATGAGG+AGG + chr8_1:15104435-15104454 Msa1180860:CDS 45.0%
TCTCTGGCCATCATTTCTTC+AGG - chr8_1:15104584-15104603 None:intergenic 45.0%
AGCATGGACCGAACAATATG+AGG - chr8_1:15104639-15104658 None:intergenic 45.0%
TCTTATGGACGTTGCTTACC+TGG + chr8_1:15104665-15104684 Msa1180860:intron 45.0%
AACTTCCGCTTCCATTGGAA+TGG + chr8_1:15104938-15104957 Msa1180860:intron 45.0%
ACTTCCGCTTCCATTGGAAT+GGG + chr8_1:15104939-15104958 Msa1180860:intron 45.0%
!!! TTGTTTTGGTAGCTCTGCAG+TGG + chr8_1:15105037-15105056 Msa1180860:intron 45.0%
AAATCCAGAGGGTAGAAGTG+GGG - chr8_1:15105137-15105156 None:intergenic 45.0%
GAAATCCAGAGGGTAGAAGT+GGG - chr8_1:15105138-15105157 None:intergenic 45.0%
GGGATGATACGAAATCCAGA+GGG - chr8_1:15105148-15105167 None:intergenic 45.0%
AGGGATGATACGAAATCCAG+AGG - chr8_1:15105149-15105168 None:intergenic 45.0%
CGTATCATCCCTCTTGAATC+TGG + chr8_1:15105157-15105176 Msa1180860:CDS 45.0%
! ATCAAGAGTGCGATTAGGAC+TGG - chr8_1:15105285-15105304 None:intergenic 45.0%
! GCAAGATCAAGAGTGCGATT+AGG - chr8_1:15105290-15105309 None:intergenic 45.0%
TTGATGCTCGGTTTCCAGTA+GGG - chr8_1:15105331-15105350 None:intergenic 45.0%
! CGAGCATCAAGTGATAATGC+TGG + chr8_1:15105341-15105360 Msa1180860:CDS 45.0%
GCAAGAGAATGTAGCATGCA+TGG + chr8_1:15105427-15105446 Msa1180860:CDS 45.0%
! AAAGTGCTAACGCTACCCTT+TGG - chr8_1:15105487-15105506 None:intergenic 45.0%
GTTGCAGATCCAATGAGCAA+GGG - chr8_1:15105573-15105592 None:intergenic 45.0%
TGTTGCAGATCCAATGAGCA+AGG - chr8_1:15105574-15105593 None:intergenic 45.0%
TATAGGTACGTGTCTTGCTG+AGG + chr8_1:15105596-15105615 Msa1180860:CDS 45.0%
TACAGCTACTATGGCCTGCA+AGG + chr8_1:15100278-15100297 Msa1180860:exon 50.0%
TCAAGAGCTTCAACCTGCTC+AGG - chr8_1:15100351-15100370 None:intergenic 50.0%
!! TCACACAATTTGGTTCGGGC+TGG + chr8_1:15100760-15100779 Msa1180860:intron 50.0%
ATCACACGTCTGTGTCGTGT+TGG + chr8_1:15101477-15101496 Msa1180860:intron 50.0%
TCACACGTCTGTGTCGTGTT+GGG + chr8_1:15101478-15101497 Msa1180860:intron 50.0%
GTTGGGACACTAACATGCGT+CGG + chr8_1:15101495-15101514 Msa1180860:intron 50.0%
AGACACGAGTTGTGAGTCAG+TGG + chr8_1:15101816-15101835 Msa1180860:CDS 50.0%
TGTGAGTCAGTGGTGACTAG+TGG + chr8_1:15101826-15101845 Msa1180860:CDS 50.0%
! TGACTAGTCAACATCCCCCA+AGG + chr8_1:15101860-15101879 Msa1180860:CDS 50.0%
! GACTAGTCAACATCCCCCAA+GGG + chr8_1:15101861-15101880 Msa1180860:CDS 50.0%
ATCAATCACACTCACCCTGC+AGG - chr8_1:15101895-15101914 None:intergenic 50.0%
TGCAGGGTGAGTGTGATTGA+TGG + chr8_1:15101894-15101913 Msa1180860:intron 50.0%
TACTGGAACCGCTGTTGAGT+GGG + chr8_1:15102062-15102081 Msa1180860:CDS 50.0%
CATTTGGACCCACTCAACAG+CGG - chr8_1:15102073-15102092 None:intergenic 50.0%
GGTCCAAATGCCTGGAATGA+AGG + chr8_1:15102083-15102102 Msa1180860:CDS 50.0%
ATTCCAATGGAATCCGGACC+AGG - chr8_1:15102331-15102350 None:intergenic 50.0%
GCGACGATTCCAATGGAATC+CGG - chr8_1:15102337-15102356 None:intergenic 50.0%
AGCAAGAGCTTGTGGTCTAG+TGG + chr8_1:15102384-15102403 Msa1180860:CDS 50.0%
GCAAGAGCTTGTGGTCTAGT+GGG + chr8_1:15102385-15102404 Msa1180860:CDS 50.0%
TAGTGGGACTAGAACCCACT+AGG + chr8_1:15102401-15102420 Msa1180860:CDS 50.0%
AGTGGGACTAGAACCCACTA+GGG + chr8_1:15102402-15102421 Msa1180860:CDS 50.0%
CTAGAACCCACTAGGGTAAG+TGG + chr8_1:15102409-15102428 Msa1180860:intron 50.0%
TCTGGACCACTTACCCTAGT+GGG - chr8_1:15102418-15102437 None:intergenic 50.0%
ATCTGGACCACTTACCCTAG+TGG - chr8_1:15102419-15102438 None:intergenic 50.0%
CGGCAATCACGAAACCACAA+AGG - chr8_1:15102534-15102553 None:intergenic 50.0%
ATAGTTCCACCGCTAGCAGT+GGG - chr8_1:15102582-15102601 None:intergenic 50.0%
AATAGTTCCACCGCTAGCAG+TGG - chr8_1:15102583-15102602 None:intergenic 50.0%
AACAACCAAAAGTCGCGAGC+AGG - chr8_1:15102744-15102763 None:intergenic 50.0%
TGTAGAAGATGGCAGCCTAG+TGG + chr8_1:15102779-15102798 Msa1180860:CDS 50.0%
TAGGACTGGGTCATTGCACA+AGG - chr8_1:15102872-15102891 None:intergenic 50.0%
GTGTGCCTTAGATCTGTGAG+AGG + chr8_1:15102939-15102958 Msa1180860:intron 50.0%
! GGTCTTATCAGGTACCCACT+AGG - chr8_1:15103034-15103053 None:intergenic 50.0%
ATGGAACCACCTCCTTCACA+AGG - chr8_1:15103055-15103074 None:intergenic 50.0%
!! AGTACTTCTGGAACGCTCCA+TGG - chr8_1:15103192-15103211 None:intergenic 50.0%
! GCTGGCTCAGAAGACTACTA+TGG + chr8_1:15103239-15103258 Msa1180860:CDS 50.0%
GGCTCAGAAGACTACTATGG+CGG + chr8_1:15103242-15103261 Msa1180860:CDS 50.0%
GTTTCTCAGCCCAATGTCAC+TGG + chr8_1:15103471-15103490 Msa1180860:CDS 50.0%
CACTTAGCCAGAGATTGAGC+CGG + chr8_1:15103523-15103542 Msa1180860:CDS 50.0%
AACCTTAGGAGAATGGCTGG+AGG - chr8_1:15104280-15104299 None:intergenic 50.0%
AGGAACCTTAGGAGAATGGC+TGG - chr8_1:15104283-15104302 None:intergenic 50.0%
ACGCAGGAACCTTAGGAGAA+TGG - chr8_1:15104287-15104306 None:intergenic 50.0%
GTTGGCCCTTGTAGCTTAAC+TGG + chr8_1:15104367-15104386 Msa1180860:CDS 50.0%
AGCTTAACTGGATCTCGCGT+AGG + chr8_1:15104379-15104398 Msa1180860:CDS 50.0%
TCTCGCGTAGGAAATTACGG+GGG + chr8_1:15104391-15104410 Msa1180860:CDS 50.0%
GCTCAATAGTGTGTGCTAGC+GGG - chr8_1:15104429-15104448 None:intergenic 50.0%
CTTCCGCTTCCATTGGAATG+GGG + chr8_1:15104940-15104959 Msa1180860:intron 50.0%
CTTCCCCATTCCAATGGAAG+CGG - chr8_1:15104946-15104965 None:intergenic 50.0%
AGAAGGCTTCCCCATTCCAA+TGG - chr8_1:15104952-15104971 None:intergenic 50.0%
! TTGGTAGCTCTGCAGTGGAA+TGG + chr8_1:15105042-15105061 Msa1180860:intron 50.0%
CGAAATCCAGAGGGTAGAAG+TGG - chr8_1:15105139-15105158 None:intergenic 50.0%
CTTGCATCTGCCCTTGACAT+TGG + chr8_1:15105305-15105324 Msa1180860:CDS 50.0%
TCCAGTAGGGCCAATGTCAA+GGG - chr8_1:15105318-15105337 None:intergenic 50.0%
TTCCAGTAGGGCCAATGTCA+AGG - chr8_1:15105319-15105338 None:intergenic 50.0%
CTTGATGCTCGGTTTCCAGT+AGG - chr8_1:15105332-15105351 None:intergenic 50.0%
AGGCACAAACCCTTGCTCAT+TGG + chr8_1:15105561-15105580 Msa1180860:CDS 50.0%
GCTACTATGGCCTGCAAGGA+TGG + chr8_1:15100282-15100301 Msa1180860:exon 55.0%
TGCAGGACTTGCATCCCTTG+GGG - chr8_1:15101878-15101897 None:intergenic 55.0%
CTGCAGGACTTGCATCCCTT+GGG - chr8_1:15101879-15101898 None:intergenic 55.0%
CAAGGGATGCAAGTCCTGCA+GGG + chr8_1:15101878-15101897 Msa1180860:CDS 55.0%
CTACTGGAACCGCTGTTGAG+TGG + chr8_1:15102061-15102080 Msa1180860:CDS 55.0%
GTTGAGTGGGTCCAAATGCC+TGG + chr8_1:15102075-15102094 Msa1180860:CDS 55.0%
CTGATATGGACAGCCTGGTC+CGG + chr8_1:15102315-15102334 Msa1180860:intron 55.0%
AATGTGCTGCCCACTGCTAG+CGG + chr8_1:15102570-15102589 Msa1180860:CDS 55.0%
AGAGCAGACATGCTGCCTAG+TGG + chr8_1:15103016-15103035 Msa1180860:CDS 55.0%
GAGCAGACATGCTGCCTAGT+GGG + chr8_1:15103017-15103036 Msa1180860:CDS 55.0%
GTCTTCTGAGCCAGCACCAT+CGG - chr8_1:15103234-15103253 None:intergenic 55.0%
TCAGCCCAATGTCACTGGGT+GGG + chr8_1:15103476-15103495 Msa1180860:CDS 55.0%
CTTCCCCACCCAGTGACATT+GGG - chr8_1:15103483-15103502 None:intergenic 55.0%
TCTTCCCCACCCAGTGACAT+TGG - chr8_1:15103484-15103503 None:intergenic 55.0%
GGGTACAGCAGGACAAGCAA+AGG - chr8_1:15104148-15104167 None:intergenic 55.0%
! GAATGGCTGGAGGCACATTC+TGG - chr8_1:15104270-15104289 None:intergenic 55.0%
TGCCTCCAGCCATTCTCCTA+AGG + chr8_1:15104275-15104294 Msa1180860:CDS 55.0%
TGAGTTCACATGCTGGGCTG+AGG + chr8_1:15105519-15105538 Msa1180860:CDS 55.0%
AGCAAGGGTTTGTGCCTCAG+GGG - chr8_1:15105558-15105577 None:intergenic 55.0%
GAGCAAGGGTTTGTGCCTCA+GGG - chr8_1:15105559-15105578 None:intergenic 55.0%
TGAGCAAGGGTTTGTGCCTC+AGG - chr8_1:15105560-15105579 None:intergenic 55.0%
GCAGGACTTGCATCCCTTGG+GGG - chr8_1:15101877-15101896 None:intergenic 60.0%
CCTGCAGGACTTGCATCCCT+TGG - chr8_1:15101880-15101899 None:intergenic 60.0%
CCAAGGGATGCAAGTCCTGC+AGG + chr8_1:15101877-15101896 Msa1180860:CDS 60.0%
CAGCCTGGTCCGGATTCCAT+TGG + chr8_1:15102325-15102344 Msa1180860:intron 60.0%
! GGTGTCGCAGCAAGAGCTTG+TGG + chr8_1:15102376-15102395 Msa1180860:CDS 60.0%
CGAGCAGGTGCCAATGTGGT+TGG - chr8_1:15102729-15102748 None:intergenic 60.0%
! TGGCACCTGCTCGCGACTTT+TGG + chr8_1:15102736-15102755 Msa1180860:CDS 60.0%
GATGGCAGCCTAGTGGCAAG+TGG + chr8_1:15102786-15102805 Msa1180860:intron 60.0%
! TGTGGCACAGGAGGCATGCT+TGG - chr8_1:15102989-15103008 None:intergenic 60.0%
CTCAGCCCAATGTCACTGGG+TGG + chr8_1:15103475-15103494 Msa1180860:CDS 60.0%
CAGCCCAATGTCACTGGGTG+GGG + chr8_1:15103477-15103496 Msa1180860:CDS 60.0%
CTAAGTGCTCGCAGAGCTGC+TGG - chr8_1:15103510-15103529 None:intergenic 60.0%
GATGCCCCACTTCTACCCTC+TGG + chr8_1:15105130-15105149 Msa1180860:CDS 60.0%
GCCCTTGACATTGGCCCTAC+TGG + chr8_1:15105314-15105333 Msa1180860:CDS 60.0%
TGTGCCTCAGGGGTTCCTAG+CGG - chr8_1:15105548-15105567 None:intergenic 60.0%
GGTACGTGTCTTGCTGAGGC+TGG + chr8_1:15105600-15105619 Msa1180860:exon 60.0%
GTCGCGAGCAGGTGCCAATG+TGG - chr8_1:15102733-15102752 None:intergenic 65.0%
GTCACCGCTAGGAACCCCTG+AGG + chr8_1:15105541-15105560 Msa1180860:CDS 65.0%
GTGCTGCCCACTGCTAGCGG+TGG + chr8_1:15102573-15102592 Msa1180860:CDS 70.0%
GCTGGGCTGAGGTCACCGCT+AGG + chr8_1:15105530-15105549 Msa1180860:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 15100016 15105676 15100016 ID=Msa1180860;Name=Msa1180860
chr8_1 mRNA 15100016 15105676 15100016 ID=Msa1180860-mRNA-1;Parent=Msa1180860;Name=Msa1180860-mRNA-1;_AED=0.11;_eAED=0.11;_QI=272|1|1|1|1|1|15|60|703
chr8_1 exon 15100016 15100490 15100016 ID=Msa1180860-mRNA-1:exon:5661;Parent=Msa1180860-mRNA-1
chr8_1 exon 15101181 15101340 15101181 ID=Msa1180860-mRNA-1:exon:5662;Parent=Msa1180860-mRNA-1
chr8_1 exon 15101808 15101899 15101808 ID=Msa1180860-mRNA-1:exon:5663;Parent=Msa1180860-mRNA-1
chr8_1 exon 15102014 15102104 15102014 ID=Msa1180860-mRNA-1:exon:5664;Parent=Msa1180860-mRNA-1
chr8_1 exon 15102328 15102423 15102328 ID=Msa1180860-mRNA-1:exon:5665;Parent=Msa1180860-mRNA-1
chr8_1 exon 15102507 15102620 15102507 ID=Msa1180860-mRNA-1:exon:5666;Parent=Msa1180860-mRNA-1
chr8_1 exon 15102717 15102800 15102717 ID=Msa1180860-mRNA-1:exon:5667;Parent=Msa1180860-mRNA-1
chr8_1 exon 15102950 15103105 15102950 ID=Msa1180860-mRNA-1:exon:5668;Parent=Msa1180860-mRNA-1
chr8_1 exon 15103189 15103263 15103189 ID=Msa1180860-mRNA-1:exon:5669;Parent=Msa1180860-mRNA-1
chr8_1 exon 15103438 15103544 15103438 ID=Msa1180860-mRNA-1:exon:5670;Parent=Msa1180860-mRNA-1
chr8_1 exon 15103626 15103818 15103626 ID=Msa1180860-mRNA-1:exon:5671;Parent=Msa1180860-mRNA-1
chr8_1 exon 15104271 15104456 15104271 ID=Msa1180860-mRNA-1:exon:5672;Parent=Msa1180860-mRNA-1
chr8_1 exon 15104542 15104619 15104542 ID=Msa1180860-mRNA-1:exon:5673;Parent=Msa1180860-mRNA-1
chr8_1 exon 15105049 15105183 15105049 ID=Msa1180860-mRNA-1:exon:5674;Parent=Msa1180860-mRNA-1
chr8_1 exon 15105275 15105676 15105275 ID=Msa1180860-mRNA-1:exon:5675;Parent=Msa1180860-mRNA-1
chr8_1 five_prime_UTR 15100016 15100287 15100016 ID=Msa1180860-mRNA-1:five_prime_utr;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15100288 15100490 15100288 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15101181 15101340 15101181 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15101808 15101899 15101808 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15102014 15102104 15102014 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15102328 15102423 15102328 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15102507 15102620 15102507 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15102717 15102800 15102717 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15102950 15103105 15102950 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15103189 15103263 15103189 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15103438 15103544 15103438 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15103626 15103818 15103626 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15104271 15104456 15104271 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15104542 15104619 15104542 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15105049 15105183 15105049 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 CDS 15105275 15105616 15105275 ID=Msa1180860-mRNA-1:cds;Parent=Msa1180860-mRNA-1
chr8_1 three_prime_UTR 15105617 15105676 15105617 ID=Msa1180860-mRNA-1:three_prime_utr;Parent=Msa1180860-mRNA-1
Gene Sequence

>Msa1180860

ATGGCCTGCAAGGATGGTAATAAGCACTTAATGGATAATGGAAAGTATGTACGTTATACACCTGAGCAGGTTGAAGCTCTTGAAAGGCTTTATCATGAATGTCCTAAACCAAGTTCAATTCGAAGACAACAACTTATTAGGGAATGTCCTATTCTTTCTAATATTGAACCAAGACAAATCAAAGTTTGGTTTCAGAATAGAAGATGTAGAGAGAAGCAGAGAAAAGAGTCTTTCAGGTTGCAAGGTGTGAATAGGAAGTTGACAGCCATGAATAAGCTGTTGATGGAGGAAAATGATAGGTTGCAGAAGCAGGTGTCTCACCTCGTGTATGAGAATGGCTATTTTCGTCAAAACACCCAAAATGCAACCAAAGACACGAGTTGTGAGTCAGTGGTGACTAGTGGTCAGCACAATATGACTAGTCAACATCCCCCAAGGGATGCAAGTCCTGCAGGGCTTTTGTCCATTGCAGAAGAAACTTTAGCAGAATTTCTTTCAAAGGCTACTGGAACCGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTCGCTATTTCTCATGGTTGCACTGGTGTCGCAGCAAGAGCTTGTGGTCTAGTGGGACTAGAACCCACTAGGGTTGCAGAAATCCTAAAAGATCGTCCTTTGTGGTTTCGTGATTGCCGAGCTGTTGATATTGTCAATGTGCTGCCCACTGCTAGCGGTGGAACTATTGAGCTGCTTTATATGCAGCTTTATGCACCAACCACATTGGCACCTGCTCGCGACTTTTGGTTGTTACGCTACACTTCTGTTGTAGAAGATGGCAGCCTAGTGATCTGTGAGAGGTCTCTTAAAAATACTCAAAATGGTCCAAGCATGCCTCCTGTGCCACATTTTGTTAGAGCAGACATGCTGCCTAGTGGGTACCTGATAAGACCTTGTGAAGGAGGTGGTTCCATCATCCACATTGTTGATCATATGGACTTGGAGCCATGGAGCGTTCCAGAAGTACTGCGTCCACTATATGAATCACCGATGGTGCTGGCTCAGAAGACTACTATGGCGGCTTTACGTCATCTAAGGCAGATTTCGCATGAAGTTTCTCAGCCCAATGTCACTGGGTGGGGAAGACGACCAGCAGCTCTGCGAGCACTTAGCCAGAGATTGAGCCGGGGTTTCAATGAGGCACTCAATGGATTTACTGATGAAGGATGGACAATGATGGGCAATGACGGTGTTGATGATGTCACTATTCTAGTGAATTCATCACCTGACAAGTTAATGGGTCTGAATCTTTCCTTTGGCAATGGATTTCCTTCTGTCAGTAATGCTGTGTTATGTGCCAAGGCATCAATGCTATTACAGAATGTGCCTCCAGCCATTCTCCTAAGGTTCCTGCGTGAACATAGATCAGAATGGGCAGACCATAATATGGATGCTTACACAGCTGCTGCCATTAAAGTTGGCCCTTGTAGCTTAACTGGATCTCGCGTAGGAAATTACGGGGGTCAAGTGATACTCCCGCTAGCACACACTATTGAGCATGAGGAGTTTTTGGAAGTTATTAAGTTGGACGGAGTTGCCCATTCTCCTGAAGAAATGATGGCCAGAGAATTGTTTCTGTTGCAACTCTGCAGTGGAATGGATGAGAATGCTATTGGCACCTGTGCAGAACTTATATTTGCTCCAATTGATGCTTCATTTGCTGATGATGCCCCACTTCTACCCTCTGGATTTCGTATCATCCCTCTTGAATCTGGAAAAGAATCGTCCAGTCCTAATCGCACTCTTGATCTTGCATCTGCCCTTGACATTGGCCCTACTGGAAACCGAGCATCAAGTGATAATGCTGGAAATTCTGGTTGTGTGAGATCTGTGATGACAATAGCATTTGAATTTGCATATGAAAGTCATATGCAAGAGAATGTAGCATGCATGGCACGCCAATATGTTCGCAGTATTATATCATCAGTCCAAAGGGTAGCGTTAGCACTTTCTCCTTCTAATCTGAGTTCACATGCTGGGCTGAGGTCACCGCTAGGAACCCCTGAGGCACAAACCCTTGCTCATTGGATCTGCAACAGTTATAGGTACGTGTCTTGCTGA
Protein sequence

>Msa1180860

MACKDGNKHLMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPRQIKVWFQNRRCREKQRKESFRLQGVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRQNTQNATKDTSCESVVTSGQHNMTSQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVDIVNVLPTASGGTIELLYMQLYAPTTLAPARDFWLLRYTSVVEDGSLVICERSLKNTQNGPSMPPVPHFVRADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESPMVLAQKTTMAALRHLRQISHEVSQPNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTMMGNDGVDDVTILVNSSPDKLMGLNLSFGNGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADHNMDAYTAAAIKVGPCSLTGSRVGNYGGQVILPLAHTIEHEEFLEVIKLDGVAHSPEEMMARELFLLQLCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLESGKESSSPNRTLDLASALDIGPTGNRASSDNAGNSGCVRSVMTIAFEFAYESHMQENVACMARQYVRSIISSVQRVALALSPSNLSSHAGLRSPLGTPEAQTLAHWICNSYRYVSC*