Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182850 | XP_003626871.1 | 99.099 | 666 | 6 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1360 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182850 | sp|O50064|FIMB2_ARATH | 78.097 | 662 | 136 | 2 | 1 | 661 | 1 | 654 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1182850 | Msa1231550 | 0.802550 | 5.320159e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182850 | MtrunA17_Chr8g0338551 | 99.099 | 666 | 6 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1360 |
| Msa1182850 | MtrunA17_Chr7g0234481 | 85.907 | 667 | 85 | 5 | 1 | 663 | 1 | 662 | 0.0 | 1150 |
| Msa1182850 | MtrunA17_Chr5g0448051 | 67.169 | 664 | 213 | 2 | 1 | 664 | 1 | 659 | 0.0 | 915 |
| Msa1182850 | MtrunA17_Chr5g0445111 | 63.235 | 680 | 229 | 3 | 1 | 660 | 1 | 679 | 0.0 | 883 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182850 | AT5G48460.1 | 78.097 | 662 | 136 | 2 | 1 | 661 | 1 | 654 | 0.0 | 1068 |
| Msa1182850 | AT5G35700.1 | 65.710 | 662 | 222 | 4 | 1 | 659 | 1 | 660 | 0.0 | 894 |
| Msa1182850 | AT4G26700.4 | 66.934 | 623 | 205 | 1 | 1 | 623 | 1 | 622 | 0.0 | 876 |
| Msa1182850 | AT4G26700.2 | 66.934 | 623 | 205 | 1 | 1 | 623 | 1 | 622 | 0.0 | 876 |
| Msa1182850 | AT4G26700.1 | 66.934 | 623 | 205 | 1 | 1 | 623 | 1 | 622 | 0.0 | 876 |
| Msa1182850 | AT5G55400.1 | 64.696 | 626 | 217 | 3 | 1 | 624 | 1 | 624 | 0.0 | 856 |
| Msa1182850 | AT5G55400.2 | 64.696 | 626 | 217 | 3 | 1 | 624 | 1 | 624 | 0.0 | 856 |
| Msa1182850 | AT5G55400.3 | 64.696 | 626 | 217 | 3 | 1 | 624 | 1 | 624 | 0.0 | 856 |
| Msa1182850 | AT2G04750.1 | 63.636 | 660 | 228 | 5 | 1 | 657 | 1 | 651 | 0.0 | 856 |
| Msa1182850 | AT4G26700.5 | 66.143 | 573 | 193 | 1 | 1 | 573 | 1 | 572 | 0.0 | 791 |
| Msa1182850 | AT4G26700.6 | 66.143 | 573 | 193 | 1 | 1 | 573 | 1 | 572 | 0.0 | 791 |
| Msa1182850 | AT4G26700.3 | 66.143 | 573 | 193 | 1 | 1 | 573 | 1 | 572 | 0.0 | 791 |
| Msa1182850 | AT4G26700.7 | 72.429 | 457 | 125 | 1 | 168 | 624 | 19 | 474 | 0.0 | 699 |
Find 131 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAACTGATGCTGATATTT+TGG | 0.138471 | 8_1:-18017933 | Msa1182850:CDS |
| TGCAACCAAGTTGTTAAAAT+AGG | 0.188350 | 8_1:-18018207 | Msa1182850:CDS |
| GATTCTTCTATTGATGAAAA+TGG | 0.218359 | 8_1:-18015737 | Msa1182850:CDS |
| TGCAGCCTAGAGCTGTAAAT+TGG | 0.227557 | 8_1:-18017338 | Msa1182850:CDS |
| GAATTCCTCAGCATTCTTAA+AGG | 0.241723 | 8_1:-18020698 | Msa1182850:CDS |
| CTTAACTCTGCTAAAGCTAT+TGG | 0.257781 | 8_1:-18020321 | Msa1182850:CDS |
| ATTGTTTATTATCCTAAGTT+TGG | 0.260035 | 8_1:-18015563 | Msa1182850:three_prime_UTR |
| CAAAAGACGGCGTTCTTCTT+TGG | 0.262609 | 8_1:-18020531 | Msa1182850:intron |
| AAGAATGCTGAGGAATTCTT+TGG | 0.279033 | 8_1:+18020703 | None:intergenic |
| GAGAGAAGTTGGCAACATTA+TGG | 0.282586 | 8_1:+18021831 | None:intergenic |
| GCTTATCAATGTGGCAGTTC+CGG | 0.291492 | 8_1:-18020421 | Msa1182850:CDS |
| CATAAGATATGTCTGGTTAC+TGG | 0.328014 | 8_1:-18021662 | Msa1182850:exon |
| TTCTCATTGGTAAATGTTGC+TGG | 0.329595 | 8_1:-18018171 | Msa1182850:CDS |
| GCAACCAAGTTGTTAAAATA+GGG | 0.329708 | 8_1:-18018206 | Msa1182850:CDS |
| CTTATCAATGTGGCAGTTCC+GGG | 0.333421 | 8_1:-18020420 | Msa1182850:CDS |
| ATGTTGAAACTGATTATTAT+AGG | 0.335329 | 8_1:+18015507 | None:intergenic |
| AACTTTCAATCTTGACATCT+TGG | 0.341820 | 8_1:+18021380 | None:intergenic |
| AAGAAAGAGCATTTCGCCTT+TGG | 0.345628 | 8_1:-18018930 | Msa1182850:CDS |
| GGTGATATCACAGATTATTA+AGG | 0.348768 | 8_1:-18020151 | Msa1182850:intron |
| TCTTTGCAGATGGATTCTTT+TGG | 0.353385 | 8_1:-18018319 | Msa1182850:intron |
| ACAAAAGCAAGATTAAGATT+TGG | 0.360008 | 8_1:+18019472 | None:intergenic |
| CCACTATGTCTCTTGCAGTT+AGG | 0.361119 | 8_1:+18019503 | None:intergenic |
| GGAGAGAGCTTCTTATGTTC+AGG | 0.364544 | 8_1:-18021334 | Msa1182850:CDS |
| TTTCAGCGTCATCTGGTGCT+TGG | 0.368288 | 8_1:-18020174 | Msa1182850:intron |
| CTTGTAACAAAAGGAGTAAC+TGG | 0.375475 | 8_1:-18017312 | Msa1182850:intron |
| TTCAGCGTCATCTGGTGCTT+GGG | 0.375496 | 8_1:-18020173 | Msa1182850:intron |
| TGAATTGCTTGATGATAGTA+AGG | 0.391871 | 8_1:-18019949 | Msa1182850:intron |
| ATTACCTCAGTGATGTCTTC+AGG | 0.392028 | 8_1:+18016440 | None:intergenic |
| GTGGAAGGATTAGTGTATTC+TGG | 0.398642 | 8_1:+18019601 | None:intergenic |
| AAAACTTAGGTTCCAAACTT+AGG | 0.404056 | 8_1:+18015551 | None:intergenic |
| TGTACTCTGATTTCTTCAAA+TGG | 0.410707 | 8_1:+18019787 | None:intergenic |
| ATTCTTGTTTCAGCGTCATC+TGG | 0.412164 | 8_1:-18020181 | Msa1182850:intron |
| GCAGCCTAGAGCTGTAAATT+GGG | 0.415395 | 8_1:-18017337 | Msa1182850:CDS |
| GAAGTGAAGGAGAGAGAAGT+TGG | 0.417956 | 8_1:+18021820 | None:intergenic |
| AGAGAAGTTGGCAACATTAT+GGG | 0.424202 | 8_1:+18021832 | None:intergenic |
| TGAGTATGAGGAGGGAAAGT+GGG | 0.424623 | 8_1:-18021428 | Msa1182850:CDS |
| CTCATTGGTTGAAGGATCAA+TGG | 0.425456 | 8_1:+18020567 | None:intergenic |
| TGCAATTTCGAAGAGCTCAT+TGG | 0.426990 | 8_1:+18020552 | None:intergenic |
| GAAACAGCTTAAATTCTCAT+TGG | 0.434900 | 8_1:-18018184 | Msa1182850:CDS |
| ATAAGATATGTCTGGTTACT+GGG | 0.435544 | 8_1:-18021661 | Msa1182850:exon |
| CCTCATTATAGTTGATCAAA+AGG | 0.445199 | 8_1:-18015654 | Msa1182850:three_prime_UTR |
| CACCTTAACAATATCTTCTC+TGG | 0.446667 | 8_1:+18019819 | None:intergenic |
| ATGAGTATGAGGAGGGAAAG+TGG | 0.451963 | 8_1:-18021429 | Msa1182850:CDS |
| ATATATCAATAATGTCTTTG+AGG | 0.455023 | 8_1:-18018884 | Msa1182850:CDS |
| TGTCAGCAGGGATTGTAAAC+TGG | 0.457303 | 8_1:-18018281 | Msa1182850:CDS |
| AATAGCAAAGTTAGCAGCAC+AGG | 0.458719 | 8_1:-18017902 | Msa1182850:CDS |
| CCCACTGTCCTTTCTTCATG+AGG | 0.462266 | 8_1:+18015833 | None:intergenic |
| GCTATTAAGTGTGGTGAGAA+GGG | 0.468638 | 8_1:+18021798 | None:intergenic |
| ACTCTTGAGAAGGTGTCAGC+AGG | 0.469136 | 8_1:-18018294 | Msa1182850:CDS |
| TTAAATGGCATCTTAATTGG+AGG | 0.469515 | 8_1:+18018243 | None:intergenic |
| CTAGAGTCTTCAGTGTCGTC+AGG | 0.469929 | 8_1:+18018955 | None:intergenic |
| TCTTGAACATTCTGACAAGA+TGG | 0.470848 | 8_1:-18019539 | Msa1182850:CDS |
| TAGTGAGAGTGGGAGTCAAT+TGG | 0.471021 | 8_1:-18015798 | Msa1182850:CDS |
| AGCTATTAAGTGTGGTGAGA+AGG | 0.478453 | 8_1:+18021797 | None:intergenic |
| CGAAAAGATTACTCAATCCA+TGG | 0.483964 | 8_1:-18020371 | Msa1182850:CDS |
| ATCAGTATTGCAAGAAAGCT+AGG | 0.485962 | 8_1:-18016482 | Msa1182850:CDS |
| CCACTGTCCTTTCTTCATGA+GGG | 0.487879 | 8_1:+18015834 | None:intergenic |
| ATGTCAAGATTGAAAGTTGT+GGG | 0.487972 | 8_1:-18021375 | Msa1182850:CDS |
| TTGTGTAGTTTATGAGTATG+AGG | 0.492802 | 8_1:-18021440 | Msa1182850:intron |
| AAGCAGCATGAACAGTTTCA+AGG | 0.493048 | 8_1:-18017873 | Msa1182850:intron |
| AATTGGGGTCTTGTAACAAA+AGG | 0.496142 | 8_1:-18017321 | Msa1182850:CDS |
| CAGGACAAAAGTTTATCTGA+TGG | 0.497649 | 8_1:-18017390 | Msa1182850:CDS |
| CATAAGACATAAGATATGTC+TGG | 0.501205 | 8_1:-18021669 | Msa1182850:exon |
| TGTGGTGAGAAGGGAAGTGA+AGG | 0.502757 | 8_1:+18021807 | None:intergenic |
| CGCCTTTGGATTAATAGCCT+CGG | 0.505345 | 8_1:-18018916 | Msa1182850:CDS |
| TGATGCTAGCTGTTAGAGTA+AGG | 0.506551 | 8_1:+18015876 | None:intergenic |
| CAAGGCACATTACAAAACTT+AGG | 0.507961 | 8_1:+18015538 | None:intergenic |
| AAAGGTCAATGTATGATACT+AGG | 0.513380 | 8_1:-18015636 | Msa1182850:three_prime_UTR |
| CGCCAGAGAAGATATTGTTA+AGG | 0.514946 | 8_1:-18019821 | Msa1182850:CDS |
| GGCACACAAGACTTCATTGA+AGG | 0.515640 | 8_1:-18020279 | Msa1182850:CDS |
| CTGGTGCAAGAACATTTAGA+AGG | 0.520054 | 8_1:+18019620 | None:intergenic |
| TCGAAGAGCTCATTGGTTGA+AGG | 0.520913 | 8_1:+18020559 | None:intergenic |
| ACATTTGCAAATTCTAGAGC+AGG | 0.524518 | 8_1:-18020733 | Msa1182850:CDS |
| GTCTTTGAGGATCTTAGAGA+CGG | 0.529073 | 8_1:-18018871 | Msa1182850:CDS |
| CAGTGATGTCTTCAGGAAGC+AGG | 0.536396 | 8_1:+18016447 | None:intergenic |
| TAAAACACCCTCATGAAGAA+AGG | 0.536903 | 8_1:-18015841 | Msa1182850:CDS |
| TCATTGGTTGAAGGATCAAT+GGG | 0.541850 | 8_1:+18020568 | None:intergenic |
| CTTGAACATTCTGACAAGAT+GGG | 0.542230 | 8_1:-18019538 | Msa1182850:CDS |
| TGCTGGAAATGACATTGTGC+AGG | 0.543050 | 8_1:-18018154 | Msa1182850:CDS |
| GGAACTTCAGATAGTGAGAG+TGG | 0.543630 | 8_1:-18015809 | Msa1182850:CDS |
| TGCAATACTGATGATGTAGC+TGG | 0.551121 | 8_1:+18016493 | None:intergenic |
| TGATATATGTTGAATTTCCG+AGG | 0.554248 | 8_1:+18018899 | None:intergenic |
| GCGATTTCACGCTCGCGGGA+AGG | 0.559526 | 8_1:-18017957 | Msa1182850:CDS |
| TTGAAACTGATTATTATAGG+AGG | 0.561662 | 8_1:+18015510 | None:intergenic |
| TTCCGAGGCTATTAATCCAA+AGG | 0.563447 | 8_1:+18018914 | None:intergenic |
| TAACAGCTAGCATCATGTCT+TGG | 0.567300 | 8_1:-18015868 | Msa1182850:CDS |
| CACAAGACTTCATTGAAGGA+AGG | 0.568450 | 8_1:-18020275 | Msa1182850:CDS |
| CTCTTGAGAAGGTGTCAGCA+GGG | 0.569026 | 8_1:-18018293 | Msa1182850:CDS |
| GATTACTCAATCCATGGGAA+AGG | 0.571585 | 8_1:-18020365 | Msa1182850:CDS |
| GATGTCAAGATTGAAAGTTG+TGG | 0.573074 | 8_1:-18021376 | Msa1182850:CDS |
| ATTAAACTTTAGCTTATCTG+TGG | 0.573277 | 8_1:-18018021 | Msa1182850:intron |
| TAACTTCTCCTCTGATGTCA+AGG | 0.574560 | 8_1:-18019751 | Msa1182850:intron |
| AGACCCCAATTTACAGCTCT+AGG | 0.575729 | 8_1:+18017333 | None:intergenic |
| TGTAGTTTATGAGTATGAGG+AGG | 0.580173 | 8_1:-18021437 | Msa1182850:intron |
| CCTAACTGCAAGAGACATAG+TGG | 0.583118 | 8_1:-18019503 | Msa1182850:CDS |
| GAAAAGATTACTCAATCCAT+GGG | 0.588049 | 8_1:-18020370 | Msa1182850:CDS |
| GGGAGAAAATCTGAGTGAGA+AGG | 0.588682 | 8_1:-18021355 | Msa1182850:CDS |
| CTCTTCGAAATTGCAAAAGA+CGG | 0.590029 | 8_1:-18020544 | Msa1182850:CDS |
| GTAGTTTATGAGTATGAGGA+GGG | 0.590304 | 8_1:-18021436 | Msa1182850:intron |
| TCTTTGAGGATCTTAGAGAC+GGG | 0.591124 | 8_1:-18018870 | Msa1182850:intron |
| ACTTGCGATTTCACGCTCGC+GGG | 0.603109 | 8_1:-18017961 | Msa1182850:CDS |
| AACTTGCGATTTCACGCTCG+CGG | 0.605731 | 8_1:-18017962 | Msa1182850:CDS |
| ATTAGTTACCTTGACATCAG+AGG | 0.608195 | 8_1:+18019743 | None:intergenic |
| GTATCAGAATACTGATGAGG+AGG | 0.612432 | 8_1:-18021307 | Msa1182850:CDS |
| ACAAGACTTCATTGAAGGAA+GGG | 0.614619 | 8_1:-18020274 | Msa1182850:intron |
| GCACAGAACTAAGAAGCTCA+AGG | 0.617258 | 8_1:+18017358 | None:intergenic |
| CAGAGAAGATATTGTTAAGG+TGG | 0.618213 | 8_1:-18019818 | Msa1182850:CDS |
| TCAGTATTGCAAGAAAGCTA+GGG | 0.618399 | 8_1:-18016481 | Msa1182850:CDS |
| GAACTTCAGATAGTGAGAGT+GGG | 0.620450 | 8_1:-18015808 | Msa1182850:CDS |
| GCACGCTCGTCAATAGTCCC+CGG | 0.623143 | 8_1:+18020402 | None:intergenic |
| TCAGCGTCATCTGGTGCTTG+GGG | 0.626477 | 8_1:-18020172 | Msa1182850:intron |
| CAGCCTAGAGCTGTAAATTG+GGG | 0.628174 | 8_1:-18017336 | Msa1182850:CDS |
| GTGAACTGATTCTGAAGACA+TGG | 0.629933 | 8_1:+18021621 | None:intergenic |
| CAATGGGAAGATACTTCTTG+AGG | 0.633142 | 8_1:+18020584 | None:intergenic |
| TCAAGCAATTCAAGAAGCTG+AGG | 0.634759 | 8_1:+18019960 | None:intergenic |
| TTTGTATCAGAATACTGATG+AGG | 0.640582 | 8_1:-18021310 | Msa1182850:CDS |
| ACTGCAAGAGACATAGTGGA+AGG | 0.641043 | 8_1:-18019499 | Msa1182850:CDS |
| CCTCATGAAGAAAGGACAGT+GGG | 0.641156 | 8_1:-18015833 | Msa1182850:CDS |
| TTATTATAGGAGGAAATCCA+AGG | 0.645669 | 8_1:+18015520 | None:intergenic |
| AGCTGCCTTTAAGAATGCTG+AGG | 0.647530 | 8_1:+18020693 | None:intergenic |
| GGATGTACAGTAGTCAACAT+TGG | 0.648422 | 8_1:-18020300 | Msa1182850:CDS |
| TTATCAATGTGGCAGTTCCG+GGG | 0.652098 | 8_1:-18020419 | Msa1182850:CDS |
| TAAGATATGTCTGGTTACTG+GGG | 0.666327 | 8_1:-18021660 | Msa1182850:exon |
| CATGAAGAAAGGACAGTGGG+AGG | 0.669124 | 8_1:-18015830 | Msa1182850:CDS |
| TCTGACACTACAGGATGCTG+AGG | 0.672458 | 8_1:-18019653 | Msa1182850:intron |
| GCTGGAAATGACATTGTGCA+GGG | 0.692017 | 8_1:-18018153 | Msa1182850:CDS |
| ATACACTAATCCTTCCACAC+TGG | 0.693042 | 8_1:-18019596 | Msa1182850:CDS |
| TTGCAGCAAGCTTATCAATG+TGG | 0.706692 | 8_1:-18020430 | Msa1182850:intron |
| CCCTCATGAAGAAAGGACAG+TGG | 0.709192 | 8_1:-18015834 | Msa1182850:CDS |
| ACTTATTGTGTGAAGCAATG+TGG | 0.720357 | 8_1:+18020666 | None:intergenic |
| GCTTCCTGAAGACATCACTG+AGG | 0.793102 | 8_1:-18016444 | Msa1182850:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTAATTTTAATTTT+AGG | + | chr8_1:18020229-18020248 | None:intergenic | 0.0% |
| !!! | ATTAATAATAACTTTTTATG+AGG | + | chr8_1:18015623-18015642 | None:intergenic | 10.0% |
| !! | TATATTCAATCTATTTAAAT+AGG | - | chr8_1:18016251-18016270 | Msa1182850:intron | 10.0% |
| !! | AAAATATGACTAAATTATAA+AGG | - | chr8_1:18020307-18020326 | Msa1182850:CDS | 10.0% |
| !! | ATAATAAATAAAACAGTAAG+AGG | + | chr8_1:18016214-18016233 | None:intergenic | 15.0% |
| !!! | TATTATAAGCTATTTGATTT+AGG | - | chr8_1:18016362-18016381 | Msa1182850:intron | 15.0% |
| !! | AATAATATTTCCATGAATAA+TGG | + | chr8_1:18016917-18016936 | None:intergenic | 15.0% |
| !! | AAAATTCAAGATTTATTTGT+AGG | + | chr8_1:18017328-18017347 | None:intergenic | 15.0% |
| !! | AGTATTCTATATTTAATTCA+AGG | - | chr8_1:18017989-18018008 | Msa1182850:CDS | 15.0% |
| !!! | ATAGATTCAAATTTTCTTTT+TGG | - | chr8_1:18018305-18018324 | Msa1182850:CDS | 15.0% |
| !! | GACTATTTACAATATTATAT+TGG | + | chr8_1:18020278-18020297 | None:intergenic | 15.0% |
| !!! | ATAGTTTTATTAACAACTTT+AGG | + | chr8_1:18020449-18020468 | None:intergenic | 15.0% |
| !!! | TTACGAAAAATTAAACTTTT+AGG | - | chr8_1:18021054-18021073 | Msa1182850:intron | 15.0% |
| !!! | TGATTTTTTCTATGAAAGAT+TGG | - | chr8_1:18015871-18015890 | Msa1182850:CDS | 20.0% |
| !!! | TTGATGTTGTTATTGAAATT+TGG | - | chr8_1:18015898-18015917 | Msa1182850:intron | 20.0% |
| !!! | GAAATTCACATTTTTTAAAG+TGG | - | chr8_1:18016297-18016316 | Msa1182850:intron | 20.0% |
| !! | TCTTGTATTTCTTCAAAATA+AGG | + | chr8_1:18016537-18016556 | None:intergenic | 20.0% |
| !! | AAAATGAACATTATAAAGAG+AGG | - | chr8_1:18016558-18016577 | Msa1182850:intron | 20.0% |
| !!! | TTCATATATTTTAAACCAAC+AGG | - | chr8_1:18017517-18017536 | Msa1182850:intron | 20.0% |
| !!! | ATACTATAATTTTTCTCAAG+AGG | + | chr8_1:18017974-18017993 | None:intergenic | 20.0% |
| !!! | AAACTAGTTCTTTAGTTTTT+TGG | - | chr8_1:18018054-18018073 | Msa1182850:intron | 20.0% |
| !!! | TTCTTTAGTTTTTTGGTAAA+AGG | - | chr8_1:18018061-18018080 | Msa1182850:intron | 20.0% |
| !! | ATATATCAATAATGTCTTTG+AGG | - | chr8_1:18018501-18018520 | Msa1182850:intron | 20.0% |
| !!! | TTTTCTTAAAAGATCTTGTA+TGG | - | chr8_1:18018593-18018612 | Msa1182850:intron | 20.0% |
| !! | GAACTATTATGTTAATGAAA+TGG | + | chr8_1:18018667-18018686 | None:intergenic | 20.0% |
| !! | ATTATTCTGGCATTTATAAT+AGG | - | chr8_1:18018736-18018755 | Msa1182850:intron | 20.0% |
| !! | TTATTCTGGCATTTATAATA+GGG | - | chr8_1:18018737-18018756 | Msa1182850:intron | 20.0% |
| !!! | TTTTTAAATGGCATCTTAAT+TGG | + | chr8_1:18019148-18019167 | None:intergenic | 20.0% |
| !!! | CAATTCTCAACTTTTTTAAA+TGG | + | chr8_1:18019160-18019179 | None:intergenic | 20.0% |
| !! | GGAAATAAAAAGTTAATACT+AGG | - | chr8_1:18019253-18019272 | Msa1182850:intron | 20.0% |
| !! | ATAAAAAGTTAATACTAGGT+AGG | - | chr8_1:18019257-18019276 | Msa1182850:intron | 20.0% |
| !! | AAATCATTATCCAAATTACT+CGG | - | chr8_1:18019292-18019311 | Msa1182850:intron | 20.0% |
| !! | AGAAAACACAAAAATTTATG+CGG | - | chr8_1:18019663-18019682 | Msa1182850:intron | 20.0% |
| !!! | TTGAACATAATGCTTTATTA+TGG | + | chr8_1:18020343-18020362 | None:intergenic | 20.0% |
| !! | TTTGTCAATACAAATGTTAT+AGG | + | chr8_1:18020835-18020854 | None:intergenic | 20.0% |
| !!! | TTCAATGTTGTTTATTTCTT+CGG | - | chr8_1:18021015-18021034 | Msa1182850:intron | 20.0% |
| !!! | TAATTTTTCGTAAAAGAAGT+TGG | + | chr8_1:18021047-18021066 | None:intergenic | 20.0% |
| !! | TAAAAAAAATAGTTCACTTG+TGG | + | chr8_1:18021689-18021708 | None:intergenic | 20.0% |
| !! | ATTGTTTATTATCCTAAGTT+TGG | - | chr8_1:18021822-18021841 | Msa1182850:five_prime_UTR | 20.0% |
| ! | TTTGAAAAAGCTATTAAGTG+TGG | + | chr8_1:18015599-18015618 | None:intergenic | 25.0% |
| !! | TGTTATTGAAATTTGGAATC+TGG | - | chr8_1:18015905-18015924 | Msa1182850:intron | 25.0% |
| !! | GTTATTGAAATTTGGAATCT+GGG | - | chr8_1:18015906-18015925 | Msa1182850:intron | 25.0% |
| !!! | TGATTTTGAATTGTTTCTCA+AGG | - | chr8_1:18016102-18016121 | Msa1182850:intron | 25.0% |
| !! | GTTCAATTATCAACTTTTTG+AGG | - | chr8_1:18016161-18016180 | Msa1182850:intron | 25.0% |
| !!! | TACTTGATCTGATTGTTTTA+TGG | + | chr8_1:18016344-18016363 | None:intergenic | 25.0% |
| ! | TCTTCAAAATAAGGAAAACT+CGG | + | chr8_1:18016528-18016547 | None:intergenic | 25.0% |
| !! | GTAAACAGTCATTGATTAAA+CGG | - | chr8_1:18017256-18017275 | Msa1182850:intron | 25.0% |
| ! | ATACTGAAAAAATCTACTGA+TGG | - | chr8_1:18017356-18017375 | Msa1182850:CDS | 25.0% |
| !! | TTTTGAATAGATACAACTAC+TGG | - | chr8_1:18017379-18017398 | Msa1182850:CDS | 25.0% |
| !!! | TATTTTAAACCAACAGGATA+TGG | - | chr8_1:18017523-18017542 | Msa1182850:intron | 25.0% |
| !! | ACTAATTTTGCTCTTTCAAA+GGG | + | chr8_1:18017826-18017845 | None:intergenic | 25.0% |
| !! | AACTAATTTTGCTCTTTCAA+AGG | + | chr8_1:18017827-18017846 | None:intergenic | 25.0% |
| ! | ACAAAAGCAAGATTAAGATT+TGG | + | chr8_1:18017916-18017935 | None:intergenic | 25.0% |
| ! | TCAAGGAAAAATACATTATG+CGG | - | chr8_1:18018006-18018025 | Msa1182850:CDS | 25.0% |
| ! | ACAAACTATAAGATGAAGAA+AGG | + | chr8_1:18018271-18018290 | None:intergenic | 25.0% |
| !! | TTGCTTTGTTGAAATTATTC+TGG | - | chr8_1:18018723-18018742 | Msa1182850:intron | 25.0% |
| ! | TTAATTAATGCCGAGTAATT+TGG | + | chr8_1:18019305-18019324 | None:intergenic | 25.0% |
| ! | GCATAATCTAACTAAATCAT+TGG | - | chr8_1:18019333-18019352 | Msa1182850:intron | 25.0% |
| !! | ATTAAACTTTAGCTTATCTG+TGG | - | chr8_1:18019364-18019383 | Msa1182850:intron | 25.0% |
| !! | AATAACTGATGCTGATATTT+TGG | - | chr8_1:18019452-18019471 | Msa1182850:CDS | 25.0% |
| ! | CTTAAGAATGGTATATGTTA+GGG | - | chr8_1:18019561-18019580 | Msa1182850:CDS | 25.0% |
| !! | TTTTCTTATCACTTTCTTTG+TGG | + | chr8_1:18019649-18019668 | None:intergenic | 25.0% |
| ! | TTTAGTATTATTGCATCTGA+AGG | + | chr8_1:18019774-18019793 | None:intergenic | 25.0% |
| ! | TTGTTATAATCTCAACTTTC+AGG | - | chr8_1:18019976-18019995 | Msa1182850:CDS | 25.0% |
| ! | TTATCTAATTATTGCATGCA+AGG | - | chr8_1:18020131-18020150 | Msa1182850:intron | 25.0% |
| !! | AACATAATGCTTTATTATGG+TGG | + | chr8_1:18020340-18020359 | None:intergenic | 25.0% |
| ! | TTTGAATGGTTAAGACTTAA+GGG | + | chr8_1:18020407-18020426 | None:intergenic | 25.0% |
| !! | TTTTGAATGGTTAAGACTTA+AGG | + | chr8_1:18020408-18020427 | None:intergenic | 25.0% |
| ! | TAAGTCTTAACCATTCAAAA+AGG | - | chr8_1:18020408-18020427 | Msa1182850:CDS | 25.0% |
| !! | TGTAGTTTTCTATTATGCAA+TGG | - | chr8_1:18021222-18021241 | Msa1182850:intron | 25.0% |
| !! | TTTCTATTATGCAATGGATT+AGG | - | chr8_1:18021228-18021247 | Msa1182850:intron | 25.0% |
| !!! | TTCTATTATGCAATGGATTA+GGG | - | chr8_1:18021229-18021248 | Msa1182850:intron | 25.0% |
| ! | AAGGCTTAGTTTAATTCATA+TGG | - | chr8_1:18021263-18021282 | Msa1182850:intron | 25.0% |
| ! | GATTCTTCTATTGATGAAAA+TGG | - | chr8_1:18021648-18021667 | Msa1182850:CDS | 25.0% |
| !! | CTTTTGATCAACTATAATGA+GGG | + | chr8_1:18021733-18021752 | None:intergenic | 25.0% |
| CATAAGACATAAGATATGTC+TGG | - | chr8_1:18015716-18015735 | Msa1182850:exon | 30.0% | |
| ATAAGATATGTCTGGTTACT+GGG | - | chr8_1:18015724-18015743 | Msa1182850:exon | 30.0% | |
| TTGTGTAGTTTATGAGTATG+AGG | - | chr8_1:18015945-18015964 | Msa1182850:intron | 30.0% | |
| AACTTTCAATCTTGACATCT+TGG | + | chr8_1:18016008-18016027 | None:intergenic | 30.0% | |
| ATGTCAAGATTGAAAGTTGT+GGG | - | chr8_1:18016010-18016029 | Msa1182850:intron | 30.0% | |
| TTTGTATCAGAATACTGATG+AGG | - | chr8_1:18016075-18016094 | Msa1182850:intron | 30.0% | |
| ! | TTTGAATTGTTTCTCAAGGT+AGG | - | chr8_1:18016106-18016125 | Msa1182850:intron | 30.0% |
| ATCAGGAAAAAGCAAGAAAA+AGG | + | chr8_1:18016191-18016210 | None:intergenic | 30.0% | |
| AATAAAACAGTAAGAGGATC+AGG | + | chr8_1:18016208-18016227 | None:intergenic | 30.0% | |
| ! | AAGCACTTTAGAGATTGTTT+GGG | + | chr8_1:18016470-18016489 | None:intergenic | 30.0% |
| ! | TAAGCACTTTAGAGATTGTT+TGG | + | chr8_1:18016471-18016490 | None:intergenic | 30.0% |
| AAAATAAGGAAAACTCGGTT+TGG | + | chr8_1:18016523-18016542 | None:intergenic | 30.0% | |
| !! | ACTGCTATTTCCATTATTCA+TGG | - | chr8_1:18016904-18016923 | Msa1182850:intron | 30.0% |
| GAAAAGATTACTCAATCCAT+GGG | - | chr8_1:18017015-18017034 | Msa1182850:intron | 30.0% | |
| GGTGATATCACAGATTATTA+AGG | - | chr8_1:18017234-18017253 | Msa1182850:intron | 30.0% | |
| ! | TGAATTGCTTGATGATAGTA+AGG | - | chr8_1:18017436-18017455 | Msa1182850:intron | 30.0% |
| TGTACTCTGATTTCTTCAAA+TGG | + | chr8_1:18017601-18017620 | None:intergenic | 30.0% | |
| ! | GATGTCAAGGTAACTAATTT+TGG | - | chr8_1:18017647-18017666 | Msa1182850:intron | 30.0% |
| !!! | GTGTACGTTTTAAGACTTAA+AGG | + | chr8_1:18018092-18018111 | None:intergenic | 30.0% |
| GTAACAGAATCTGCTAAAAA+GGG | + | chr8_1:18018122-18018141 | None:intergenic | 30.0% | |
| TGTAACAGAATCTGCTAAAA+AGG | + | chr8_1:18018123-18018142 | None:intergenic | 30.0% | |
| AAAATTGACCACATGAATCA+GGG | + | chr8_1:18018216-18018235 | None:intergenic | 30.0% | |
| TAAAATTGACCACATGAATC+AGG | + | chr8_1:18018217-18018236 | None:intergenic | 30.0% | |
| !!! | GAAGAGAAATTTGTTTTGTC+TGG | + | chr8_1:18018399-18018418 | None:intergenic | 30.0% |
| TGATATATGTTGAATTTCCG+AGG | + | chr8_1:18018489-18018508 | None:intergenic | 30.0% | |
| AGAAAAACAGTCGAAGAATA+AGG | + | chr8_1:18018579-18018598 | None:intergenic | 30.0% | |
| TTCAATTACTTGCAATTTGC+AGG | + | chr8_1:18018630-18018649 | None:intergenic | 30.0% | |
| CATTTATAATAGGGTCTGTT+TGG | - | chr8_1:18018746-18018765 | Msa1182850:intron | 30.0% | |
| !! | GTTGTTTTACTAAGCTATCA+TGG | + | chr8_1:18018891-18018910 | None:intergenic | 30.0% |
| !! | TTAGTTTGCATCCATTAAGT+TGG | - | chr8_1:18019031-18019050 | Msa1182850:intron | 30.0% |
| TCAACACAATACCAACTTAA+TGG | + | chr8_1:18019045-18019064 | None:intergenic | 30.0% | |
| TTAAATGGCATCTTAATTGG+AGG | + | chr8_1:18019145-18019164 | None:intergenic | 30.0% | |
| TGCAACCAAGTTGTTAAAAT+AGG | - | chr8_1:18019178-18019197 | Msa1182850:intron | 30.0% | |
| GCAACCAAGTTGTTAAAATA+GGG | - | chr8_1:18019179-18019198 | Msa1182850:intron | 30.0% | |
| !!! | GTTTCCCTATTTTAACAACT+TGG | + | chr8_1:18019186-18019205 | None:intergenic | 30.0% |
| GAAACAGCTTAAATTCTCAT+TGG | - | chr8_1:18019201-18019220 | Msa1182850:intron | 30.0% | |
| !!! | TGATGCTGATATTTTGGAAT+GGG | - | chr8_1:18019458-18019477 | Msa1182850:CDS | 30.0% |
| CCTAACATATACCATTCTTA+AGG | + | chr8_1:18019563-18019582 | None:intergenic | 30.0% | |
| CCTTAAGAATGGTATATGTT+AGG | - | chr8_1:18019560-18019579 | Msa1182850:CDS | 30.0% | |
| ! | TATTTCCTTTGTGACAGTTT+TGG | + | chr8_1:18019696-18019715 | None:intergenic | 30.0% |
| ACCATTTAATCCCTGAAAAT+GGG | + | chr8_1:18019937-18019956 | None:intergenic | 30.0% | |
| AACCATTTAATCCCTGAAAA+TGG | + | chr8_1:18019938-18019957 | None:intergenic | 30.0% | |
| !! | AACTCGATTTCTGGTAAAAT+CGG | + | chr8_1:18020568-18020587 | None:intergenic | 30.0% |
| ! | AACATTGATTGCATGTTGAT+TGG | - | chr8_1:18020656-18020675 | Msa1182850:CDS | 30.0% |
| GATTACTTGTGCAATACATT+TGG | + | chr8_1:18020737-18020756 | None:intergenic | 30.0% | |
| ! | TTCATCTTTTTCTCTTCATC+TGG | + | chr8_1:18020870-18020889 | None:intergenic | 30.0% |
| TGAATGATAAAAGAGAGAGT+GGG | + | chr8_1:18020999-18021018 | None:intergenic | 30.0% | |
| TTGAATGATAAAAGAGAGAG+TGG | + | chr8_1:18021000-18021019 | None:intergenic | 30.0% | |
| AGATGAATGATCAAAGAGTT+TGG | - | chr8_1:18021162-18021181 | Msa1182850:intron | 30.0% | |
| GATTAGGGTTACAAAGTTTA+AGG | - | chr8_1:18021244-18021263 | Msa1182850:intron | 30.0% | |
| AATGCCTGTTATACAATTTC+AGG | - | chr8_1:18021470-18021489 | Msa1182850:intron | 30.0% | |
| TTCACCTGAAATTGTATAAC+AGG | + | chr8_1:18021477-18021496 | None:intergenic | 30.0% | |
| ! | CCTTTTGATCAACTATAATG+AGG | + | chr8_1:18021734-18021753 | None:intergenic | 30.0% |
| CCTCATTATAGTTGATCAAA+AGG | - | chr8_1:18021731-18021750 | Msa1182850:five_prime_UTR | 30.0% | |
| AAAGGTCAATGTATGATACT+AGG | - | chr8_1:18021749-18021768 | Msa1182850:five_prime_UTR | 30.0% | |
| AAAACTTAGGTTCCAAACTT+AGG | + | chr8_1:18021837-18021856 | None:intergenic | 30.0% | |
| TTATTATAGGAGGAAATCCA+AGG | + | chr8_1:18021868-18021887 | None:intergenic | 30.0% | |
| AGAGAAGTTGGCAACATTAT+GGG | + | chr8_1:18015556-18015575 | None:intergenic | 35.0% | |
| CATAAGATATGTCTGGTTAC+TGG | - | chr8_1:18015723-18015742 | Msa1182850:exon | 35.0% | |
| TAAGATATGTCTGGTTACTG+GGG | - | chr8_1:18015725-18015744 | Msa1182850:exon | 35.0% | |
| TGTAGTTTATGAGTATGAGG+AGG | - | chr8_1:18015948-18015967 | Msa1182850:intron | 35.0% | |
| GTAGTTTATGAGTATGAGGA+GGG | - | chr8_1:18015949-18015968 | Msa1182850:intron | 35.0% | |
| GATGTCAAGATTGAAAGTTG+TGG | - | chr8_1:18016009-18016028 | Msa1182850:intron | 35.0% | |
| ! | TATTTGATTTAGGCCCTGTT+TGG | - | chr8_1:18016372-18016391 | Msa1182850:intron | 35.0% |
| TTTACCTGTCTATCCAAACA+GGG | + | chr8_1:18016388-18016407 | None:intergenic | 35.0% | |
| ATTTACCTGTCTATCCAAAC+AGG | + | chr8_1:18016389-18016408 | None:intergenic | 35.0% | |
| GTTTATTTGAGTGTACCTAC+TGG | + | chr8_1:18016496-18016515 | None:intergenic | 35.0% | |
| ACTAGTGCTGTAATGATTAC+AGG | - | chr8_1:18016612-18016631 | Msa1182850:intron | 35.0% | |
| !! | ACATTTGCAAATTCTAGAGC+AGG | - | chr8_1:18016652-18016671 | Msa1182850:intron | 35.0% |
| AAGAATGCTGAGGAATTCTT+TGG | + | chr8_1:18016685-18016704 | None:intergenic | 35.0% | |
| GAATTCCTCAGCATTCTTAA+AGG | - | chr8_1:18016687-18016706 | Msa1182850:intron | 35.0% | |
| ACTTATTGTGTGAAGCAATG+TGG | + | chr8_1:18016722-18016741 | None:intergenic | 35.0% | |
| ! | TCATTGGTTGAAGGATCAAT+GGG | + | chr8_1:18016820-18016839 | None:intergenic | 35.0% |
| CTCTTCGAAATTGCAAAAGA+CGG | - | chr8_1:18016841-18016860 | Msa1182850:intron | 35.0% | |
| CGAAAAGATTACTCAATCCA+TGG | - | chr8_1:18017014-18017033 | Msa1182850:intron | 35.0% | |
| ! | TGATTTTCATTCCTTTCCCA+TGG | + | chr8_1:18017034-18017053 | None:intergenic | 35.0% |
| CTTAACTCTGCTAAAGCTAT+TGG | - | chr8_1:18017064-18017083 | Msa1182850:intron | 35.0% | |
| ACAAGACTTCATTGAAGGAA+GGG | - | chr8_1:18017111-18017130 | Msa1182850:intron | 35.0% | |
| ! | GAGGAGTTTTCTTTAGATTG+AGG | + | chr8_1:18017409-18017428 | None:intergenic | 35.0% |
| CACCTTAACAATATCTTCTC+TGG | + | chr8_1:18017569-18017588 | None:intergenic | 35.0% | |
| CAGAGAAGATATTGTTAAGG+TGG | - | chr8_1:18017567-18017586 | Msa1182850:intron | 35.0% | |
| ATTAGTTACCTTGACATCAG+AGG | + | chr8_1:18017645-18017664 | None:intergenic | 35.0% | |
| !!! | TTTTTTATAGCCAGTGTGGA+AGG | + | chr8_1:18017802-18017821 | None:intergenic | 35.0% |
| TCTTGAACATTCTGACAAGA+TGG | - | chr8_1:18017846-18017865 | Msa1182850:intron | 35.0% | |
| CTTGAACATTCTGACAAGAT+GGG | - | chr8_1:18017847-18017866 | Msa1182850:intron | 35.0% | |
| !!! | AAGATTATTTTGACCTGTGC+TGG | + | chr8_1:18017951-18017970 | None:intergenic | 35.0% |
| GAATCTGCTAAAAAGGGTAA+TGG | + | chr8_1:18018116-18018135 | None:intergenic | 35.0% | |
| ATCCACGTAGCATAAGTTAA+CGG | + | chr8_1:18018160-18018179 | None:intergenic | 35.0% | |
| TATATCCATCTTTCGCTTGT+AGG | - | chr8_1:18018359-18018378 | Msa1182850:intron | 35.0% | |
| AACAAGCTGAAAACAGCTAA+TGG | + | chr8_1:18018856-18018875 | None:intergenic | 35.0% | |
| ! | AAACAAGTGTGTCACTATCT+AGG | + | chr8_1:18019006-18019025 | None:intergenic | 35.0% |
| !! | TTGTGTTGATTCTTTGCAGA+TGG | - | chr8_1:18019056-18019075 | Msa1182850:intron | 35.0% |
| !! | TCTTTGCAGATGGATTCTTT+TGG | - | chr8_1:18019066-18019085 | Msa1182850:intron | 35.0% |
| TTCTCATTGGTAAATGTTGC+TGG | - | chr8_1:18019214-18019233 | Msa1182850:intron | 35.0% | |
| !! | CTGATGCTGATATTTTGGAA+TGG | - | chr8_1:18019457-18019476 | Msa1182850:CDS | 35.0% |
| ! | AGGCTGCTTTGAATATTGAA+AGG | + | chr8_1:18019543-18019562 | None:intergenic | 35.0% |
| ATTCAAAGCAGCCTTAAGAA+TGG | - | chr8_1:18019549-18019568 | Msa1182850:CDS | 35.0% | |
| AACTTGCAATGTGTTTAGAC+TGG | - | chr8_1:18019850-18019869 | Msa1182850:intron | 35.0% | |
| ! | TTCATTTTCTGCCCATTTTC+AGG | - | chr8_1:18019923-18019942 | Msa1182850:intron | 35.0% |
| ! | TCATTTTCTGCCCATTTTCA+GGG | - | chr8_1:18019924-18019943 | Msa1182850:intron | 35.0% |
| CAGGACAAAAGTTTATCTGA+TGG | - | chr8_1:18019995-18020014 | Msa1182850:CDS | 35.0% | |
| ! | AATTGGGGTCTTGTAACAAA+AGG | - | chr8_1:18020064-18020083 | Msa1182850:intron | 35.0% |
| CTTGTAACAAAAGGAGTAAC+TGG | - | chr8_1:18020073-18020092 | Msa1182850:intron | 35.0% | |
| ! | GTGAAACTTGCCTTTTTGAA+TGG | + | chr8_1:18020421-18020440 | None:intergenic | 35.0% |
| GTACCAAAATTGTGTCAACT+CGG | + | chr8_1:18020596-18020615 | None:intergenic | 35.0% | |
| GGTACCTAAAAACGTAAACT+CGG | - | chr8_1:18020611-18020630 | Msa1182850:CDS | 35.0% | |
| ! | TGTTATAGGAGTGTAAAGCA+AGG | + | chr8_1:18020821-18020840 | None:intergenic | 35.0% |
| ! | TCTTTTTCTCTTCATCTGGA+TGG | + | chr8_1:18020866-18020885 | None:intergenic | 35.0% |
| ATCAGTATTGCAAGAAAGCT+AGG | - | chr8_1:18020903-18020922 | Msa1182850:intron | 35.0% | |
| TCAGTATTGCAAGAAAGCTA+GGG | - | chr8_1:18020904-18020923 | Msa1182850:intron | 35.0% | |
| AAGACATCACTGAGGTAATT+TGG | - | chr8_1:18020949-18020968 | Msa1182850:intron | 35.0% | |
| TGGGAGCAATGAAACAATAT+TGG | + | chr8_1:18020980-18020999 | None:intergenic | 35.0% | |
| ATTAGCTAGCACAGCAAATT+TGG | - | chr8_1:18021107-18021126 | Msa1182850:intron | 35.0% | |
| ! | GTTGGTTCAAGGATAATCTT+CGG | + | chr8_1:18021296-18021315 | None:intergenic | 35.0% |
| AATATGAGCCATACTCAACA+AGG | - | chr8_1:18021332-18021351 | Msa1182850:CDS | 35.0% | |
| AAGTCAATCCTTGTTGAGTA+TGG | + | chr8_1:18021343-18021362 | None:intergenic | 35.0% | |
| TAGTCATTGCTAAACAACAG+TGG | + | chr8_1:18021424-18021443 | None:intergenic | 35.0% | |
| !!! | TTTCTTCATGAGGGTGTTTT+AGG | + | chr8_1:18021545-18021564 | None:intergenic | 35.0% |
| TAAAACACCCTCATGAAGAA+AGG | - | chr8_1:18021544-18021563 | Msa1182850:intron | 35.0% | |
| CAAGGCACATTACAAAACTT+AGG | + | chr8_1:18021850-18021869 | None:intergenic | 35.0% | |
| !! | CTAAGTTTTGTAATGTGCCT+TGG | - | chr8_1:18021848-18021867 | Msa1182850:five_prime_UTR | 35.0% |
| GAGAGAAGTTGGCAACATTA+TGG | + | chr8_1:18015557-18015576 | None:intergenic | 40.0% | |
| GCTATTAAGTGTGGTGAGAA+GGG | + | chr8_1:18015590-18015609 | None:intergenic | 40.0% | |
| AGCTATTAAGTGTGGTGAGA+AGG | + | chr8_1:18015591-18015610 | None:intergenic | 40.0% | |
| ! | GTGAACTGATTCTGAAGACA+TGG | + | chr8_1:18015767-18015786 | None:intergenic | 40.0% |
| GTATCAGAATACTGATGAGG+AGG | - | chr8_1:18016078-18016097 | Msa1182850:intron | 40.0% | |
| ! | TCTAAAGTGCTTAAGCCAGT+AGG | - | chr8_1:18016478-18016497 | Msa1182850:CDS | 40.0% |
| !! | AAGGAAAACTCGGTTTGGAT+TGG | + | chr8_1:18016518-18016537 | None:intergenic | 40.0% |
| CAATGGGAAGATACTTCTTG+AGG | + | chr8_1:18016804-18016823 | None:intergenic | 40.0% | |
| ! | CTCATTGGTTGAAGGATCAA+TGG | + | chr8_1:18016821-18016840 | None:intergenic | 40.0% |
| TGCAATTTCGAAGAGCTCAT+TGG | + | chr8_1:18016836-18016855 | None:intergenic | 40.0% | |
| GGAAATAGCAGTAAGCTAGA+TGG | + | chr8_1:18016896-18016915 | None:intergenic | 40.0% | |
| TTGCAGCAAGCTTATCAATG+TGG | - | chr8_1:18016955-18016974 | Msa1182850:intron | 40.0% | |
| GATTACTCAATCCATGGGAA+AGG | - | chr8_1:18017020-18017039 | Msa1182850:intron | 40.0% | |
| GGATGTACAGTAGTCAACAT+TGG | - | chr8_1:18017085-18017104 | Msa1182850:intron | 40.0% | |
| CACAAGACTTCATTGAAGGA+AGG | - | chr8_1:18017110-18017129 | Msa1182850:intron | 40.0% | |
| ! | ATTCTTGTTTCAGCGTCATC+TGG | - | chr8_1:18017204-18017223 | Msa1182850:intron | 40.0% |
| TCAAGCAATTCAAGAAGCTG+AGG | + | chr8_1:18017428-18017447 | None:intergenic | 40.0% | |
| TCAACTCTTCCATATCCTGT+TGG | + | chr8_1:18017535-18017554 | None:intergenic | 40.0% | |
| CGCCAGAGAAGATATTGTTA+AGG | - | chr8_1:18017564-18017583 | Msa1182850:intron | 40.0% | |
| TAACTTCTCCTCTGATGTCA+AGG | - | chr8_1:18017634-18017653 | Msa1182850:intron | 40.0% | |
| ! | GTCGCTGATTGAATTTCGTA+TGG | - | chr8_1:18017708-18017727 | Msa1182850:intron | 40.0% |
| CTGGTGCAAGAACATTTAGA+AGG | + | chr8_1:18017768-18017787 | None:intergenic | 40.0% | |
| ! | GTGGAAGGATTAGTGTATTC+TGG | + | chr8_1:18017787-18017806 | None:intergenic | 40.0% |
| ATACACTAATCCTTCCACAC+TGG | - | chr8_1:18017789-18017808 | Msa1182850:intron | 40.0% | |
| !!! | GGGATTTTTTATAGCCAGTG+TGG | + | chr8_1:18017806-18017825 | None:intergenic | 40.0% |
| ! | TTGCACATATTTTCCAGCAC+AGG | - | chr8_1:18017935-18017954 | Msa1182850:CDS | 40.0% |
| ! | TATGCGGTCGTTTAAGTTAC+TGG | - | chr8_1:18018022-18018041 | Msa1182850:intron | 40.0% |
| ATCCGTTAACTTATGCTACG+TGG | - | chr8_1:18018155-18018174 | Msa1182850:CDS | 40.0% | |
| !! | AAGAAAGAGCATTTCGCCTT+TGG | - | chr8_1:18018455-18018474 | Msa1182850:intron | 40.0% |
| TTCCGAGGCTATTAATCCAA+AGG | + | chr8_1:18018474-18018493 | None:intergenic | 40.0% | |
| ! | GTCTTTGAGGATCTTAGAGA+CGG | - | chr8_1:18018514-18018533 | Msa1182850:intron | 40.0% |
| ! | TCTTTGAGGATCTTAGAGAC+GGG | - | chr8_1:18018515-18018534 | Msa1182850:intron | 40.0% |
| !! | TCTTTTGGAGACTCTTGAGA+AGG | - | chr8_1:18019081-18019100 | Msa1182850:intron | 40.0% |
| AATAGCAAAGTTAGCAGCAC+AGG | - | chr8_1:18019483-18019502 | Msa1182850:CDS | 40.0% | |
| AAGCAGCATGAACAGTTTCA+AGG | - | chr8_1:18019512-18019531 | Msa1182850:CDS | 40.0% | |
| CATTAATTCGTCAGTGTGTG+TGG | + | chr8_1:18019591-18019610 | None:intergenic | 40.0% | |
| CGAATTAATGCACACGTCTA+TGG | - | chr8_1:18019601-18019620 | Msa1182850:CDS | 40.0% | |
| !! | GCCCATTTTCAGGGATTAAA+TGG | - | chr8_1:18019933-18019952 | Msa1182850:intron | 40.0% |
| CGGGTAAACTCGAGTAAAAT+CGG | + | chr8_1:18020495-18020514 | None:intergenic | 40.0% | |
| ! | GAGTTTGACTCGAGTTAACT+CGG | + | chr8_1:18020535-18020554 | None:intergenic | 40.0% |
| ! | TGCAATACTGATGATGTAGC+TGG | + | chr8_1:18020895-18020914 | None:intergenic | 40.0% |
| ATTACCTCAGTGATGTCTTC+AGG | + | chr8_1:18020948-18020967 | None:intergenic | 40.0% | |
| ! | ATAAGTGGACAGTTGGTTCA+AGG | + | chr8_1:18021307-18021326 | None:intergenic | 40.0% |
| TGAACCAACTGTCCACTTAT+CGG | - | chr8_1:18021307-18021326 | Msa1182850:CDS | 40.0% | |
| TGATGCTAGCTGTTAGAGTA+AGG | + | chr8_1:18021512-18021531 | None:intergenic | 40.0% | |
| TAACAGCTAGCATCATGTCT+TGG | - | chr8_1:18021517-18021536 | Msa1182850:intron | 40.0% | |
| GAACTTCAGATAGTGAGAGT+GGG | - | chr8_1:18021577-18021596 | Msa1182850:intron | 40.0% | |
| GAAGTGAAGGAGAGAGAAGT+TGG | + | chr8_1:18015568-18015587 | None:intergenic | 45.0% | |
| ATGAGTATGAGGAGGGAAAG+TGG | - | chr8_1:18015956-18015975 | Msa1182850:intron | 45.0% | |
| TGAGTATGAGGAGGGAAAGT+GGG | - | chr8_1:18015957-18015976 | Msa1182850:intron | 45.0% | |
| GGGAGAAAATCTGAGTGAGA+AGG | - | chr8_1:18016030-18016049 | Msa1182850:intron | 45.0% | |
| GGAGAGAGCTTCTTATGTTC+AGG | - | chr8_1:18016051-18016070 | Msa1182850:intron | 45.0% | |
| ! | AGCTGCCTTTAAGAATGCTG+AGG | + | chr8_1:18016695-18016714 | None:intergenic | 45.0% |
| ! | TCGAAGAGCTCATTGGTTGA+AGG | + | chr8_1:18016829-18016848 | None:intergenic | 45.0% |
| CAAAAGACGGCGTTCTTCTT+TGG | - | chr8_1:18016854-18016873 | Msa1182850:intron | 45.0% | |
| GCTTATCAATGTGGCAGTTC+CGG | - | chr8_1:18016964-18016983 | Msa1182850:intron | 45.0% | |
| CTTATCAATGTGGCAGTTCC+GGG | - | chr8_1:18016965-18016984 | Msa1182850:intron | 45.0% | |
| TTATCAATGTGGCAGTTCCG+GGG | - | chr8_1:18016966-18016985 | Msa1182850:intron | 45.0% | |
| GGCACACAAGACTTCATTGA+AGG | - | chr8_1:18017106-18017125 | Msa1182850:intron | 45.0% | |
| !! | TCGTATGGTTCTGACACTAC+AGG | - | chr8_1:18017723-18017742 | Msa1182850:intron | 45.0% |
| CCACTATGTCTCTTGCAGTT+AGG | + | chr8_1:18017885-18017904 | None:intergenic | 45.0% | |
| CCTAACTGCAAGAGACATAG+TGG | - | chr8_1:18017882-18017901 | Msa1182850:CDS | 45.0% | |
| ! | ACTGCAAGAGACATAGTGGA+AGG | - | chr8_1:18017886-18017905 | Msa1182850:CDS | 45.0% |
| GTTCACAACCCTGATTCATG+TGG | - | chr8_1:18018205-18018224 | Msa1182850:CDS | 45.0% | |
| CCATTCCTACAAGCGAAAGA+TGG | + | chr8_1:18018367-18018386 | None:intergenic | 45.0% | |
| CCATCTTTCGCTTGTAGGAA+TGG | - | chr8_1:18018364-18018383 | Msa1182850:intron | 45.0% | |
| CGCCTTTGGATTAATAGCCT+CGG | - | chr8_1:18018469-18018488 | Msa1182850:intron | 45.0% | |
| TGTCAGCAGGGATTGTAAAC+TGG | - | chr8_1:18019104-18019123 | Msa1182850:intron | 45.0% | |
| TGCTGGAAATGACATTGTGC+AGG | - | chr8_1:18019231-18019250 | Msa1182850:intron | 45.0% | |
| GCTGGAAATGACATTGTGCA+GGG | - | chr8_1:18019232-18019251 | Msa1182850:intron | 45.0% | |
| CTGCACCAAAACTGTCACAA+AGG | - | chr8_1:18019688-18019707 | Msa1182850:intron | 45.0% | |
| GCACAGAACTAAGAAGCTCA+AGG | + | chr8_1:18020030-18020049 | None:intergenic | 45.0% | |
| TGCAGCCTAGAGCTGTAAAT+TGG | - | chr8_1:18020047-18020066 | Msa1182850:intron | 45.0% | |
| GCAGCCTAGAGCTGTAAATT+GGG | - | chr8_1:18020048-18020067 | Msa1182850:intron | 45.0% | |
| CAGCCTAGAGCTGTAAATTG+GGG | - | chr8_1:18020049-18020068 | Msa1182850:intron | 45.0% | |
| AGACCCCAATTTACAGCTCT+AGG | + | chr8_1:18020055-18020074 | None:intergenic | 45.0% | |
| ! | TACCTCAACTCGTTTTGTCC+AGG | - | chr8_1:18020172-18020191 | Msa1182850:intron | 45.0% |
| TACCTGGACAAAACGAGTTG+AGG | + | chr8_1:18020177-18020196 | None:intergenic | 45.0% | |
| GGTCAAACTCGGGTAAAATC+GGG | + | chr8_1:18020514-18020533 | None:intergenic | 45.0% | |
| CGGTCAAACTCGGGTAAAAT+CGG | + | chr8_1:18020515-18020534 | None:intergenic | 45.0% | |
| GAGTTAACTCGGTCAAACTC+GGG | + | chr8_1:18020524-18020543 | None:intergenic | 45.0% | |
| CGAGTTAACTCGGTCAAACT+CGG | + | chr8_1:18020525-18020544 | None:intergenic | 45.0% | |
| TCGGAGGTAAACTCGATTTC+TGG | + | chr8_1:18020577-18020596 | None:intergenic | 45.0% | |
| CCAAAATTGTGTCAACTCGG+AGG | + | chr8_1:18020593-18020612 | None:intergenic | 45.0% | |
| !! | CCTCCGAGTTGACACAATTT+TGG | - | chr8_1:18020590-18020609 | Msa1182850:CDS | 45.0% |
| ! | CTCGCCGAGTTTACGTTTTT+AGG | + | chr8_1:18020618-18020637 | None:intergenic | 45.0% |
| ! | GCGAGTTAACACTCGATTTG+TGG | - | chr8_1:18020633-18020652 | Msa1182850:CDS | 45.0% |
| CCACTGTCCTTTCTTCATGA+GGG | + | chr8_1:18021554-18021573 | None:intergenic | 45.0% | |
| CCTCATGAAGAAAGGACAGT+GGG | - | chr8_1:18021552-18021571 | Msa1182850:intron | 45.0% | |
| GGAACTTCAGATAGTGAGAG+TGG | - | chr8_1:18021576-18021595 | Msa1182850:intron | 45.0% | |
| TAGTGAGAGTGGGAGTCAAT+TGG | - | chr8_1:18021587-18021606 | Msa1182850:intron | 45.0% | |
| !!! | TTTTATTTCTTTATTTATTT+CGG | - | chr8_1:18017144-18017163 | Msa1182850:intron | 5.0% |
| TGTGGTGAGAAGGGAAGTGA+AGG | + | chr8_1:18015581-18015600 | None:intergenic | 50.0% | |
| TAGGCCCTGTTTGGATAGAC+AGG | - | chr8_1:18016381-18016400 | Msa1182850:intron | 50.0% | |
| TTTCAGCGTCATCTGGTGCT+TGG | - | chr8_1:18017211-18017230 | Msa1182850:intron | 50.0% | |
| TTCAGCGTCATCTGGTGCTT+GGG | - | chr8_1:18017212-18017231 | Msa1182850:intron | 50.0% | |
| TCTGACACTACAGGATGCTG+AGG | - | chr8_1:18017732-18017751 | Msa1182850:intron | 50.0% | |
| CTAGAGTCTTCAGTGTCGTC+AGG | + | chr8_1:18018433-18018452 | None:intergenic | 50.0% | |
| !! | ACTCTTGAGAAGGTGTCAGC+AGG | - | chr8_1:18019091-18019110 | Msa1182850:intron | 50.0% |
| !! | CTCTTGAGAAGGTGTCAGCA+GGG | - | chr8_1:18019092-18019111 | Msa1182850:intron | 50.0% |
| AACTTGCGATTTCACGCTCG+CGG | - | chr8_1:18019423-18019442 | Msa1182850:intron | 50.0% | |
| GTTCTCGAGTCGAGTTTACC+TGG | + | chr8_1:18020193-18020212 | None:intergenic | 50.0% | |
| CAGTGATGTCTTCAGGAAGC+AGG | + | chr8_1:18020941-18020960 | None:intergenic | 50.0% | |
| GCTTCCTGAAGACATCACTG+AGG | - | chr8_1:18020941-18020960 | Msa1182850:intron | 50.0% | |
| TTCGCCGATAAGTGGACAGT+TGG | + | chr8_1:18021314-18021333 | None:intergenic | 50.0% | |
| GGCTCATATTCGCCGATAAG+TGG | + | chr8_1:18021322-18021341 | None:intergenic | 50.0% | |
| CCCTCATGAAGAAAGGACAG+TGG | - | chr8_1:18021551-18021570 | Msa1182850:intron | 50.0% | |
| CCCACTGTCCTTTCTTCATG+AGG | + | chr8_1:18021555-18021574 | None:intergenic | 50.0% | |
| CATGAAGAAAGGACAGTGGG+AGG | - | chr8_1:18021555-18021574 | Msa1182850:intron | 50.0% | |
| TCAGCGTCATCTGGTGCTTG+GGG | - | chr8_1:18017213-18017232 | Msa1182850:intron | 55.0% | |
| ACTTGCGATTTCACGCTCGC+GGG | - | chr8_1:18019424-18019443 | Msa1182850:intron | 55.0% | |
| GCACGCTCGTCAATAGTCCC+CGG | + | chr8_1:18016986-18017005 | None:intergenic | 60.0% | |
| GCGATTTCACGCTCGCGGGA+AGG | - | chr8_1:18019428-18019447 | Msa1182850:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 18015512 | 18021895 | 18015512 | ID=Msa1182850;Name=Msa1182850 |
| chr8_1 | mRNA | 18015512 | 18021895 | 18015512 | ID=Msa1182850-mRNA-1;Parent=Msa1182850;Name=Msa1182850-mRNA-1;_AED=0.12;_eAED=0.12;_QI=219|1|1|1|1|1|14|215|666 |
| chr8_1 | exon | 18015512 | 18015915 | 18015512 | ID=Msa1182850-mRNA-1:exon:6910;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18016445 | 18016536 | 18016445 | ID=Msa1182850-mRNA-1:exon:6909;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18017313 | 18017409 | 18017313 | ID=Msa1182850-mRNA-1:exon:6908;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18017874 | 18018031 | 18017874 | ID=Msa1182850-mRNA-1:exon:6907;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18018133 | 18018332 | 18018133 | ID=Msa1182850-mRNA-1:exon:6906;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18018871 | 18019026 | 18018871 | ID=Msa1182850-mRNA-1:exon:6905;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18019451 | 18019662 | 18019451 | ID=Msa1182850-mRNA-1:exon:6904;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18019752 | 18019868 | 18019752 | ID=Msa1182850-mRNA-1:exon:6903;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18019950 | 18020018 | 18019950 | ID=Msa1182850-mRNA-1:exon:6902;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18020152 | 18020190 | 18020152 | ID=Msa1182850-mRNA-1:exon:6901;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18020275 | 18020446 | 18020275 | ID=Msa1182850-mRNA-1:exon:6900;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18020532 | 18020773 | 18020532 | ID=Msa1182850-mRNA-1:exon:6899;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18021284 | 18021454 | 18021284 | ID=Msa1182850-mRNA-1:exon:6898;Parent=Msa1182850-mRNA-1 |
| chr8_1 | exon | 18021590 | 18021895 | 18021590 | ID=Msa1182850-mRNA-1:exon:6897;Parent=Msa1182850-mRNA-1 |
| chr8_1 | five_prime_UTR | 18021677 | 18021895 | 18021677 | ID=Msa1182850-mRNA-1:five_prime_utr;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18021590 | 18021676 | 18021590 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18021284 | 18021454 | 18021284 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18020532 | 18020773 | 18020532 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18020275 | 18020446 | 18020275 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18020152 | 18020190 | 18020152 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18019950 | 18020018 | 18019950 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18019752 | 18019868 | 18019752 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18019451 | 18019662 | 18019451 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18018871 | 18019026 | 18018871 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18018133 | 18018332 | 18018133 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18017874 | 18018031 | 18017874 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18017313 | 18017409 | 18017313 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18016445 | 18016536 | 18016445 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | CDS | 18015727 | 18015915 | 18015727 | ID=Msa1182850-mRNA-1:cds;Parent=Msa1182850-mRNA-1 |
| chr8_1 | three_prime_UTR | 18015512 | 18015726 | 18015512 | ID=Msa1182850-mRNA-1:three_prime_utr;Parent=Msa1182850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
