Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191690 | XP_003625157.1 | 98.093 | 734 | 14 | 0 | 1 | 734 | 1 | 734 | 0.0 | 1488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191690 | sp|P93755|C3H30_ARATH | 65.834 | 761 | 188 | 22 | 1 | 734 | 1 | 716 | 0.0 | 884 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191690 | A2Q3L5 | 98.093 | 734 | 14 | 0 | 1 | 734 | 1 | 734 | 0.0 | 1488 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1191690 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1034740 | Msa1191690 | 0.969010 | 1.692138e-129 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191690 | MtrunA17_Chr7g0257831 | 98.093 | 734 | 14 | 0 | 1 | 734 | 1 | 734 | 0.0 | 1488 |
| Msa1191690 | MtrunA17_Chr3g0088521 | 64.206 | 718 | 221 | 15 | 33 | 731 | 31 | 731 | 0.0 | 845 |
| Msa1191690 | MtrunA17_Chr1g0171151 | 53.808 | 604 | 255 | 12 | 33 | 630 | 17 | 602 | 0.0 | 568 |
| Msa1191690 | MtrunA17_Chr5g0437251 | 42.647 | 748 | 297 | 24 | 34 | 731 | 18 | 683 | 2.17e-163 | 487 |
| Msa1191690 | MtrunA17_Chr5g0430211 | 41.691 | 686 | 302 | 14 | 39 | 678 | 27 | 660 | 5.91e-153 | 461 |
| Msa1191690 | MtrunA17_Chr1g0187591 | 41.420 | 676 | 299 | 19 | 44 | 680 | 30 | 647 | 2.73e-142 | 432 |
| Msa1191690 | MtrunA17_Chr3g0092171 | 54.315 | 394 | 142 | 7 | 33 | 422 | 69 | 428 | 2.11e-132 | 401 |
| Msa1191690 | MtrunA17_Chr3g0092171 | 60.377 | 53 | 21 | 0 | 623 | 675 | 453 | 505 | 2.46e-12 | 70.1 |
| Msa1191690 | MtrunA17_Chr3g0092221 | 50.124 | 403 | 143 | 10 | 95 | 495 | 12 | 358 | 2.04e-110 | 340 |
| Msa1191690 | MtrunA17_Chr3g0113651 | 39.912 | 456 | 161 | 11 | 45 | 490 | 8 | 360 | 9.70e-96 | 306 |
| Msa1191690 | MtrunA17_Chr3g0105131 | 35.940 | 601 | 245 | 18 | 62 | 661 | 32 | 493 | 1.40e-95 | 306 |
| Msa1191690 | MtrunA17_Chr3g0105101 | 40.812 | 468 | 173 | 11 | 50 | 517 | 28 | 391 | 7.73e-95 | 300 |
| Msa1191690 | MtrunA17_Chr3g0105141 | 66.929 | 127 | 41 | 1 | 243 | 368 | 15 | 141 | 4.59e-61 | 202 |
| Msa1191690 | MtrunA17_Chr6g0487481 | 75.701 | 107 | 26 | 0 | 260 | 366 | 99 | 205 | 2.06e-57 | 200 |
| Msa1191690 | MtrunA17_Chr8g0389561 | 57.229 | 166 | 57 | 2 | 260 | 417 | 77 | 236 | 2.81e-56 | 197 |
| Msa1191690 | MtrunA17_Chr2g0324781 | 69.369 | 111 | 34 | 0 | 264 | 374 | 77 | 187 | 1.21e-53 | 191 |
| Msa1191690 | MtrunA17_Chr3g0105121 | 33.971 | 418 | 202 | 11 | 263 | 675 | 8 | 356 | 1.61e-53 | 188 |
| Msa1191690 | MtrunA17_Chr3g0135351 | 61.029 | 136 | 49 | 2 | 254 | 388 | 43 | 175 | 1.49e-52 | 183 |
| Msa1191690 | MtrunA17_Chr4g0040391 | 66.355 | 107 | 36 | 0 | 260 | 366 | 56 | 162 | 1.63e-50 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191690 | AT2G41900.1 | 65.834 | 761 | 188 | 22 | 1 | 734 | 1 | 716 | 0.0 | 884 |
| Msa1191690 | AT5G12850.1 | 53.748 | 707 | 270 | 19 | 41 | 727 | 36 | 705 | 0.0 | 684 |
| Msa1191690 | AT5G58620.1 | 44.328 | 670 | 252 | 18 | 44 | 683 | 11 | 589 | 5.39e-162 | 481 |
| Msa1191690 | AT2G40140.2 | 40.311 | 707 | 257 | 20 | 43 | 728 | 29 | 591 | 1.64e-143 | 433 |
| Msa1191690 | AT2G40140.1 | 40.311 | 707 | 257 | 20 | 43 | 728 | 29 | 591 | 1.64e-143 | 433 |
| Msa1191690 | AT3G55980.1 | 47.586 | 435 | 156 | 9 | 41 | 461 | 24 | 400 | 5.04e-123 | 380 |
| Msa1191690 | AT3G55980.2 | 47.586 | 435 | 156 | 9 | 41 | 461 | 91 | 467 | 4.49e-122 | 380 |
| Msa1191690 | AT4G29190.1 | 51.389 | 216 | 93 | 4 | 220 | 428 | 36 | 246 | 1.25e-58 | 202 |
| Msa1191690 | AT2G19810.1 | 56.604 | 159 | 68 | 1 | 210 | 368 | 25 | 182 | 1.01e-56 | 197 |
| Msa1191690 | AT2G25900.2 | 72.477 | 109 | 30 | 0 | 260 | 368 | 86 | 194 | 1.06e-56 | 196 |
| Msa1191690 | AT2G25900.1 | 72.477 | 109 | 30 | 0 | 260 | 368 | 86 | 194 | 1.06e-56 | 196 |
| Msa1191690 | AT5G07500.1 | 64.463 | 121 | 43 | 0 | 246 | 366 | 34 | 154 | 9.84e-55 | 188 |
| Msa1191690 | AT1G03790.1 | 59.859 | 142 | 49 | 3 | 242 | 379 | 64 | 201 | 7.45e-52 | 185 |
| Msa1191690 | AT5G44260.1 | 60.156 | 128 | 46 | 2 | 242 | 368 | 42 | 165 | 8.92e-49 | 176 |
Find 233 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATAATTCTTGGTCAAAA+TGG | 0.154209 | 8_1:-36384861 | Msa1191690:CDS |
| CTAGTGCTGGCTGTAATCTT+AGG | 0.193223 | 8_1:-36386166 | Msa1191690:CDS |
| ATTTCCTCAAATCTCCATTT+TGG | 0.243115 | 8_1:-36384141 | Msa1191690:three_prime_UTR |
| TTATTGCAGGCGGCTTCTTA+TGG | 0.247506 | 8_1:-36385045 | Msa1191690:CDS |
| ATGCCAGGGGTCTGTTTATC+AGG | 0.258008 | 8_1:-36384050 | Msa1191690:three_prime_UTR |
| CCGTTAGCATCCACGGAATT+AGG | 0.259510 | 8_1:+36386275 | None:intergenic |
| GAAAGTGATTATTTCTTTAT+CGG | 0.262167 | 8_1:-36386417 | Msa1191690:CDS |
| CCCCTGGCATCCACAATTAT+TGG | 0.271523 | 8_1:+36384063 | None:intergenic |
| GTGAAGCTGCTTCTTGCAGC+AGG | 0.273866 | 8_1:-36386305 | Msa1191690:CDS |
| AACTGAGATCAAAGAGAAAT+TGG | 0.283003 | 8_1:-36384698 | Msa1191690:CDS |
| TTTGGGGATGATACAGGATT+TGG | 0.290209 | 8_1:-36384112 | Msa1191690:three_prime_UTR |
| TTCTTATTCTCCTCCTTTGT+CGG | 0.292786 | 8_1:-36386123 | Msa1191690:CDS |
| CGCGTGCTTATTCCCATGAT+TGG | 0.294935 | 8_1:-36385908 | Msa1191690:CDS |
| AAAACAGTTGAAGTCAGATT+TGG | 0.296997 | 8_1:+36385171 | None:intergenic |
| ACTTTCTCGGGTCCCTTCTT+CGG | 0.297219 | 8_1:+36385850 | None:intergenic |
| CTTTCTCGGGTCCCTTCTTC+GGG | 0.310844 | 8_1:+36385851 | None:intergenic |
| ACATTTGAAGATTGATCCTT+TGG | 0.314841 | 8_1:-36384026 | Msa1191690:three_prime_UTR |
| TACAATGGCCGAAGCTCTTC+AGG | 0.319804 | 8_1:+36385651 | None:intergenic |
| ATCCCAGCCTTGCATCTTCC+TGG | 0.322304 | 8_1:-36385435 | Msa1191690:CDS |
| AACTCCATGCTTGCAGCTGC+TGG | 0.324417 | 8_1:-36384889 | Msa1191690:CDS |
| TCCTGTATCATCCCCAAAAC+TGG | 0.333421 | 8_1:+36384117 | None:intergenic |
| ATCTCAGGTGCTGCGCCAGC+TGG | 0.340015 | 8_1:-36384667 | Msa1191690:CDS |
| CGGTGGATGAGGTTGGATTA+TGG | 0.349552 | 8_1:-36386529 | Msa1191690:CDS |
| GCAGCCATGAGCATGTTGCC+TGG | 0.353518 | 8_1:-36385564 | Msa1191690:CDS |
| TGCTGCGCCAGCTGGTTCCT+CGG | 0.353578 | 8_1:-36384659 | Msa1191690:CDS |
| CTTCTTCGGGCATTCTCCCC+TGG | 0.358679 | 8_1:+36385864 | None:intergenic |
| CTGGCTCAGTCAATAATTCT+TGG | 0.360024 | 8_1:-36384870 | Msa1191690:CDS |
| TCCCCAAAACTGGACCAAAA+TGG | 0.363905 | 8_1:+36384127 | None:intergenic |
| ACAGGCATGCCAACTCATTA+AGG | 0.364336 | 8_1:+36385310 | None:intergenic |
| CGGCCATTGTATGTTTCAAC+TGG | 0.366588 | 8_1:-36385639 | Msa1191690:CDS |
| ACATGTTACAAAAGGGTCAT+TGG | 0.369130 | 8_1:-36384169 | Msa1191690:three_prime_UTR |
| GTTGTTAACTGCCTTGCCTC+AGG | 0.374258 | 8_1:+36384513 | None:intergenic |
| AAGAGATCATCAAGATTTGA+TGG | 0.375352 | 8_1:+36385228 | None:intergenic |
| GGAAGCAGAAAGTAAAAGAA+TGG | 0.376884 | 8_1:-36384410 | Msa1191690:three_prime_UTR |
| CAATTGACTTCAACTTCAAC+AGG | 0.377422 | 8_1:+36386060 | None:intergenic |
| GTAAGGGTGCTTGCCGGCGC+GGG | 0.377691 | 8_1:-36385794 | Msa1191690:CDS |
| TCAAGATTTGATGGATTCAA+TGG | 0.378043 | 8_1:+36385237 | None:intergenic |
| CTTGAGCCCATTGGAGAGAT+AGG | 0.383762 | 8_1:+36384982 | None:intergenic |
| TTGTTGCTGTTGATCATAAT+CGG | 0.386100 | 8_1:+36385335 | None:intergenic |
| ATTCCGAATGTATTCTTTCA+AGG | 0.389840 | 8_1:-36385943 | Msa1191690:CDS |
| CTAGACTGAAGATTACTTCC+AGG | 0.391284 | 8_1:+36385417 | None:intergenic |
| GCTCTTCACTGTGCTGCTTC+CGG | 0.395253 | 8_1:-36386353 | Msa1191690:CDS |
| GAACTCCCTCTTTCTCCTGC+TGG | 0.397305 | 8_1:-36386038 | Msa1191690:CDS |
| TATCGGATGTTGATATCAAC+AGG | 0.399105 | 8_1:-36386400 | Msa1191690:CDS |
| AGATGCAAGGCTGGGATGTT+TGG | 0.402195 | 8_1:+36385441 | None:intergenic |
| CTAATTCCGTGGATGCTAAC+GGG | 0.402744 | 8_1:-36386274 | Msa1191690:CDS |
| TTCTCCCCTGGATGAACAAA+AGG | 0.403658 | 8_1:+36385876 | None:intergenic |
| GAGGAGCTACTTCAAATTGA+TGG | 0.405740 | 8_1:-36386191 | Msa1191690:CDS |
| GATCATCTTCATTTGAGCTT+GGG | 0.407859 | 8_1:-36384777 | Msa1191690:CDS |
| ACCGATAGTTAAGTGATTCA+TGG | 0.410974 | 8_1:+36386640 | None:intergenic |
| AGTGTTACAAAGGTAACTTT+AGG | 0.411007 | 8_1:-36384363 | Msa1191690:three_prime_UTR |
| TGTTGATCATCATTTATTGC+AGG | 0.414822 | 8_1:-36385058 | Msa1191690:CDS |
| GCCAGCTGGTTCCTCGGGTG+AGG | 0.415311 | 8_1:-36384653 | Msa1191690:CDS |
| TGTCGGCTTCACCTGAGAAC+GGG | 0.415939 | 8_1:-36386106 | Msa1191690:CDS |
| TGAAGCTGCTTCTTGCAGCA+GGG | 0.417923 | 8_1:-36386304 | Msa1191690:CDS |
| TGATTCATGGTGTGGTTTCT+CGG | 0.418912 | 8_1:+36386653 | None:intergenic |
| TTTCACACAACTCTGTTGCT+TGG | 0.421951 | 8_1:-36385470 | Msa1191690:CDS |
| CAATAATTCTTGGTCAAAAT+GGG | 0.422094 | 8_1:-36384860 | Msa1191690:CDS |
| GTCTGTTGATCATGCTGTAT+TGG | 0.422918 | 8_1:-36384605 | Msa1191690:CDS |
| CATTTGAAGATTGATCCTTT+GGG | 0.425180 | 8_1:-36384025 | Msa1191690:three_prime_UTR |
| TCTGTTGATCATGCTGTATT+GGG | 0.426592 | 8_1:-36384604 | Msa1191690:CDS |
| TCTTATGGTGTTCAGCCATC+AGG | 0.430030 | 8_1:-36385030 | Msa1191690:CDS |
| GCCCAATCCAACTTACCATT+GGG | 0.431247 | 8_1:+36384832 | None:intergenic |
| AAGGGCATTCAGTCCAATCA+TGG | 0.433719 | 8_1:+36385895 | None:intergenic |
| CAGCTGTAGTGATACTTTCT+CGG | 0.440024 | 8_1:+36385837 | None:intergenic |
| GCTGCGCCAGCTGGTTCCTC+GGG | 0.442943 | 8_1:-36384658 | Msa1191690:CDS |
| GACTGCACCCATGATAAATC+AGG | 0.445095 | 8_1:+36384739 | None:intergenic |
| AATTTCTCTTTGATCTCAGT+TGG | 0.445539 | 8_1:+36384700 | None:intergenic |
| AACCAATAATTGTGGATGCC+AGG | 0.449318 | 8_1:-36384065 | Msa1191690:three_prime_UTR |
| CGTGGAGACATTCTTCCTGA+TGG | 0.449642 | 8_1:+36385015 | None:intergenic |
| ACTCCACCCATGTCACCTTC+TGG | 0.450662 | 8_1:-36385501 | Msa1191690:CDS |
| TTCACTGTGCTGCTTCCGGT+GGG | 0.454176 | 8_1:-36386349 | Msa1191690:CDS |
| GGCAAAGAAGCAAACTCTCC+TGG | 0.456158 | 8_1:+36385680 | None:intergenic |
| CCCCAATGGTAAGTTGGATT+GGG | 0.458669 | 8_1:-36384833 | Msa1191690:CDS |
| CTTCCAGGAAGATGCAAGGC+TGG | 0.462334 | 8_1:+36385432 | None:intergenic |
| TGAGCAAAGGACGCCGTTGA+TGG | 0.464569 | 8_1:-36386471 | Msa1191690:CDS |
| TCAGGAAGGGATGGATCAAC+AGG | 0.466570 | 8_1:+36385996 | None:intergenic |
| CAAGCACCCTTACGAAAATC+AGG | 0.467829 | 8_1:+36385804 | None:intergenic |
| GACATCGAAGAAGGTGAGCC+AGG | 0.468116 | 8_1:+36385546 | None:intergenic |
| AGATCATCTTCATTTGAGCT+TGG | 0.468995 | 8_1:-36384778 | Msa1191690:CDS |
| AATGTTACATTAACTAAGAA+AGG | 0.469478 | 8_1:-36384431 | Msa1191690:three_prime_UTR |
| TAGTGCTGGCTGTAATCTTA+GGG | 0.470828 | 8_1:-36386165 | Msa1191690:CDS |
| TTCAACTTCAACAGGAGATC+CGG | 0.470845 | 8_1:+36386068 | None:intergenic |
| AATTAATATGACGTGGAGAC+AGG | 0.471650 | 8_1:+36385292 | None:intergenic |
| GAAGCAGAAAGTAAAAGAAT+GGG | 0.475712 | 8_1:-36384409 | Msa1191690:three_prime_UTR |
| TTGTCGGCTTCACCTGAGAA+CGG | 0.475746 | 8_1:-36386107 | Msa1191690:CDS |
| AGGACGGTACAAATTGTTCC+AGG | 0.478546 | 8_1:-36385698 | Msa1191690:CDS |
| AATGAATATGAGCACACAAA+TGG | 0.478801 | 8_1:-36384629 | Msa1191690:CDS |
| GCGAGGAGCCTGATTTATCA+TGG | 0.480265 | 8_1:-36384747 | Msa1191690:CDS |
| AGGAGATCCGGTGGTGGAGA+AGG | 0.485489 | 8_1:+36386080 | None:intergenic |
| GGAGAAGGAGACCCGTTCTC+AGG | 0.488091 | 8_1:+36386095 | None:intergenic |
| CTTCACTGTGCTGCTTCCGG+TGG | 0.492217 | 8_1:-36386350 | Msa1191690:CDS |
| GGTGACATGGGTGGAGTGAA+TGG | 0.492460 | 8_1:+36385507 | None:intergenic |
| GTCAAGCACGTCTTCTGCCA+TGG | 0.494988 | 8_1:-36385595 | Msa1191690:CDS |
| AAATTGGCAACTTCCATCTC+AGG | 0.496278 | 8_1:-36384682 | Msa1191690:CDS |
| TGAGCCAGCAGCTGCAAGCA+TGG | 0.498255 | 8_1:+36384885 | None:intergenic |
| CCAGCTGGTTCCTCGGGTGA+GGG | 0.498286 | 8_1:-36384652 | Msa1191690:CDS |
| AGCTGGCGCAGCACCTGAGA+TGG | 0.500158 | 8_1:+36384669 | None:intergenic |
| AGCCCAATCCAACTTACCAT+TGG | 0.500923 | 8_1:+36384831 | None:intergenic |
| CAATGCTAGAGATATTCATA+TGG | 0.504807 | 8_1:-36385376 | Msa1191690:CDS |
| CCCACACTCCTGAAGAGCTT+CGG | 0.505759 | 8_1:-36385659 | Msa1191690:CDS |
| CCAACCTCATCCACCGATGT+AGG | 0.509535 | 8_1:+36386536 | None:intergenic |
| TTGATGGTTGCTGCTACATA+TGG | 0.511142 | 8_1:-36386455 | Msa1191690:CDS |
| TGTACCGTCCTTGCAGAGAC+GGG | 0.511148 | 8_1:+36385710 | None:intergenic |
| GATTAAACATTTGCTCCTCA+AGG | 0.513705 | 8_1:+36384232 | None:intergenic |
| TTGTTAACTGCCTTGCCTCA+GGG | 0.514076 | 8_1:+36384514 | None:intergenic |
| CAGGGGAGAATGCCCGAAGA+AGG | 0.515191 | 8_1:-36385863 | Msa1191690:CDS |
| GTGGAACCTATCTCTCCAAT+GGG | 0.516161 | 8_1:-36384988 | Msa1191690:CDS |
| TCAGATCCAGCAGGAGAAAG+AGG | 0.517866 | 8_1:+36386032 | None:intergenic |
| CAAATTGATGGTCCTAGTGC+TGG | 0.518193 | 8_1:-36386179 | Msa1191690:CDS |
| AGCTGTAGTGATACTTTCTC+GGG | 0.519357 | 8_1:+36385838 | None:intergenic |
| TGAGAATTGTGTGTCGAAGT+TGG | 0.520178 | 8_1:+36386677 | None:intergenic |
| GGACCTTGAAAGAATACATT+CGG | 0.520381 | 8_1:+36385940 | None:intergenic |
| CCCTCACCCGAGGAACCAGC+TGG | 0.525483 | 8_1:+36384652 | None:intergenic |
| GAGATAGGTTCCACGTTTCG+TGG | 0.525659 | 8_1:+36384997 | None:intergenic |
| TCTTTCTTCTCAGATCCAGC+AGG | 0.526498 | 8_1:+36386023 | None:intergenic |
| GACATGTGTGAATATGCTCA+TGG | 0.527602 | 8_1:-36385771 | Msa1191690:CDS |
| TAGGAGAGACAGAAAACCAC+TGG | 0.527784 | 8_1:-36384344 | Msa1191690:three_prime_UTR |
| CGTAAGGGTGCTTGCCGGCG+CGG | 0.530669 | 8_1:-36385795 | Msa1191690:CDS |
| CTATCTCTCCAATGGGCTCA+AGG | 0.530752 | 8_1:-36384981 | Msa1191690:CDS |
| ACCAATAATTGTGGATGCCA+GGG | 0.531474 | 8_1:-36384064 | Msa1191690:three_prime_UTR |
| ATTGACATCCTTGAGCCCAT+TGG | 0.533162 | 8_1:+36384973 | None:intergenic |
| CGGGTCTCCTTCTCCACCAC+CGG | 0.535005 | 8_1:-36386087 | Msa1191690:CDS |
| TGATCCTACATCGGTGGATG+AGG | 0.535909 | 8_1:-36386540 | Msa1191690:CDS |
| GAAGCTGCTTCTTGCAGCAG+GGG | 0.537195 | 8_1:-36386303 | Msa1191690:CDS |
| CCTACATCGGTGGATGAGGT+TGG | 0.537476 | 8_1:-36386536 | Msa1191690:CDS |
| AAGACAGCTGATTTGTGAGT+CGG | 0.538872 | 8_1:+36385144 | None:intergenic |
| CCTAATTCCGTGGATGCTAA+CGG | 0.540668 | 8_1:-36386275 | Msa1191690:CDS |
| CTAAGATTACAGCCAGCACT+AGG | 0.544045 | 8_1:+36386167 | None:intergenic |
| TCATTTGAGCTTGGGAACAA+TGG | 0.545835 | 8_1:-36384769 | Msa1191690:CDS |
| TCTCAAGTTTAGTGTTACAA+AGG | 0.545973 | 8_1:-36384373 | Msa1191690:three_prime_UTR |
| CGTGGAACCTATCTCTCCAA+TGG | 0.547113 | 8_1:-36384989 | Msa1191690:CDS |
| GGGCTCAAGGATGTCAATGC+TGG | 0.547672 | 8_1:-36384968 | Msa1191690:CDS |
| GCCGAAGCTCTTCAGGAGTG+TGG | 0.548910 | 8_1:+36385658 | None:intergenic |
| CTAAATCTCATGCAAATGAA+AGG | 0.549377 | 8_1:-36386757 | Msa1191690:five_prime_UTR |
| TAGTTAAGTGATTCATGGTG+TGG | 0.551522 | 8_1:+36386645 | None:intergenic |
| TGGACCAAAATGGAGATTTG+AGG | 0.551683 | 8_1:+36384137 | None:intergenic |
| AGACGGGTTCTATATTGTGC+AGG | 0.553860 | 8_1:+36385726 | None:intergenic |
| GATGAGGTTGGATTATGGTA+TGG | 0.556471 | 8_1:-36386524 | Msa1191690:CDS |
| ATTCAATGGCTTCATTCGAC+CGG | 0.556611 | 8_1:+36385251 | None:intergenic |
| ACCATGAATCACTTAACTAT+CGG | 0.558236 | 8_1:-36386641 | Msa1191690:CDS |
| CCCATGTCACCTTCTGGCAA+TGG | 0.558647 | 8_1:-36385495 | Msa1191690:CDS |
| TGGGAATAAGCACGCGAACA+AGG | 0.559628 | 8_1:+36385915 | None:intergenic |
| ACATGTGTGAATATGCTCAT+GGG | 0.562526 | 8_1:-36385770 | Msa1191690:CDS |
| TTCCAGGAAGATGCAAGGCT+GGG | 0.563396 | 8_1:+36385433 | None:intergenic |
| TAAGGGTGCTTGCCGGCGCG+GGG | 0.564739 | 8_1:-36385793 | Msa1191690:CDS |
| TTGTACCGTCCTTGCAGAGA+CGG | 0.564971 | 8_1:+36385709 | None:intergenic |
| AGACAGTTAATGCCAACGCC+GGG | 0.568560 | 8_1:-36384312 | Msa1191690:three_prime_UTR |
| AGCCGTGCTCGCGGAAGCTT+AGG | 0.568886 | 8_1:+36384914 | None:intergenic |
| GACATGACAGACATCGAAGA+AGG | 0.569249 | 8_1:+36385537 | None:intergenic |
| AGGGGAGAATGCCCGAAGAA+GGG | 0.570703 | 8_1:-36385862 | Msa1191690:CDS |
| GTCCCTGATAAACAGACCCC+TGG | 0.573765 | 8_1:+36384047 | None:intergenic |
| GAATAAACAATAACATCTAA+CGG | 0.574687 | 8_1:+36386245 | None:intergenic |
| CATGGCTGCAGCAAAATCCA+TGG | 0.577281 | 8_1:+36385578 | None:intergenic |
| CCCTTACGAAAATCAGGACA+AGG | 0.579234 | 8_1:+36385810 | None:intergenic |
| CTGCTAATAACGACGTGGAA+GGG | 0.580572 | 8_1:-36386583 | Msa1191690:CDS |
| CAGATCCAGCAGGAGAAAGA+GGG | 0.581890 | 8_1:+36386033 | None:intergenic |
| ACGATCCCCGTTAGCATCCA+CGG | 0.582142 | 8_1:+36386268 | None:intergenic |
| GTATGTTTCAACTGGTTCTG+CGG | 0.583036 | 8_1:-36385631 | Msa1191690:CDS |
| AGGGCATTCAGTCCAATCAT+GGG | 0.584059 | 8_1:+36385896 | None:intergenic |
| TGAGCCAGGCAACATGCTCA+TGG | 0.584222 | 8_1:+36385560 | None:intergenic |
| GACGTGCTTGACCGAGGTGA+GGG | 0.585321 | 8_1:+36385606 | None:intergenic |
| TTCAACAGGAGATCCGGTGG+TGG | 0.585729 | 8_1:+36386074 | None:intergenic |
| CCGAAGCTCTTCAGGAGTGT+GGG | 0.587103 | 8_1:+36385659 | None:intergenic |
| GCAACAACTCCTTAATGAGT+TGG | 0.589263 | 8_1:-36385319 | Msa1191690:CDS |
| TCTCCCCTGGATGAACAAAA+GGG | 0.590156 | 8_1:+36385877 | None:intergenic |
| GAAGAGCAGTGCTCTTGTCA+AGG | 0.590240 | 8_1:+36386369 | None:intergenic |
| TTATGGTATGGTCGTCGCAA+GGG | 0.590907 | 8_1:-36386512 | Msa1191690:CDS |
| GTTCTGCGGTTCCCTCACCT+CGG | 0.594015 | 8_1:-36385617 | Msa1191690:CDS |
| CGAGGAGCCTGATTTATCAT+GGG | 0.594503 | 8_1:-36384746 | Msa1191690:CDS |
| CAAGGCAGTTAACAACTGAA+AGG | 0.594773 | 8_1:-36384506 | Msa1191690:three_prime_UTR |
| ATTGAATGTTACATGCCCAA+AGG | 0.595787 | 8_1:+36384010 | None:intergenic |
| ATTATGGTATGGTCGTCGCA+AGG | 0.597308 | 8_1:-36386513 | Msa1191690:CDS |
| TGCCAGGGGTCTGTTTATCA+GGG | 0.598217 | 8_1:-36384049 | Msa1191690:three_prime_UTR |
| GTGCTCTTGTCAAGGCCACA+AGG | 0.598467 | 8_1:+36386377 | None:intergenic |
| TATTAGCAGCAAGCTCAAGA+AGG | 0.599518 | 8_1:+36386597 | None:intergenic |
| ATCATGCTGTATTGGGAACA+TGG | 0.599645 | 8_1:-36384597 | Msa1191690:CDS |
| GCTCAAATGAAGATGATCTA+CGG | 0.601438 | 8_1:+36384782 | None:intergenic |
| GCAGAAAGTAAAAGAATGGG+AGG | 0.602648 | 8_1:-36384406 | Msa1191690:three_prime_UTR |
| GACGGAGATGAAGACGGCAC+AGG | 0.602727 | 8_1:+36386707 | None:intergenic |
| GCTGCTAATAACGACGTGGA+AGG | 0.603136 | 8_1:-36386584 | Msa1191690:CDS |
| TTCTCAGGTGAAGCCGACAA+AGG | 0.603590 | 8_1:+36386110 | None:intergenic |
| AAGAATGTCTCCACGAAACG+TGG | 0.605224 | 8_1:-36385007 | Msa1191690:CDS |
| TCTAACAGTCTTAGCCGCTC+CGG | 0.606773 | 8_1:-36385270 | Msa1191690:CDS |
| GCCATTGCCAGAAGGTGACA+TGG | 0.611555 | 8_1:+36385494 | None:intergenic |
| CTGTTAGAATTAATATGACG+TGG | 0.612704 | 8_1:+36385285 | None:intergenic |
| ATATAGAACCCGTCTCTGCA+AGG | 0.614108 | 8_1:-36385718 | Msa1191690:CDS |
| ATTCACACATGTCCCCGCGC+CGG | 0.614297 | 8_1:+36385781 | None:intergenic |
| TGATCATCATTTATTGCAGG+CGG | 0.614691 | 8_1:-36385055 | Msa1191690:CDS |
| TATGTAGCAGCAACCATCAA+CGG | 0.614726 | 8_1:+36386458 | None:intergenic |
| GTTGATATCAACAGGCCTTG+TGG | 0.614945 | 8_1:-36386392 | Msa1191690:CDS |
| TGGAGTTAGAGCCGTGCTCG+CGG | 0.616438 | 8_1:+36384905 | None:intergenic |
| AGCAGATGGTCAATGAGCAA+AGG | 0.617799 | 8_1:-36386484 | Msa1191690:CDS |
| ATATCGAGGAGAAGAACTCT+CGG | 0.618533 | 8_1:+36385200 | None:intergenic |
| AATAAGCACGCGAACAAGGT+CGG | 0.619335 | 8_1:+36385919 | None:intergenic |
| GAGACAGTTAATGCCAACGC+CGG | 0.620155 | 8_1:-36384313 | Msa1191690:three_prime_UTR |
| AAGGCTGGGATGTTTGGCTG+AGG | 0.620227 | 8_1:+36385447 | None:intergenic |
| TAATTCCGTGGATGCTAACG+GGG | 0.620451 | 8_1:-36386273 | Msa1191690:CDS |
| CCAATAATTGTGGATGCCAG+GGG | 0.621775 | 8_1:-36384063 | Msa1191690:three_prime_UTR |
| GCTCACAATGCGGATGATGT+TGG | 0.621854 | 8_1:-36384811 | Msa1191690:CDS |
| TCACTGTGCTGCTTCCGGTG+GGG | 0.621976 | 8_1:-36386348 | Msa1191690:CDS |
| ATGGGTGGAGTGAATGGTGA+AGG | 0.622440 | 8_1:+36385513 | None:intergenic |
| GATGCAGCTTGATCATCTTG+TGG | 0.622855 | 8_1:-36384566 | Msa1191690:CDS |
| CCAATCCAACTTACCATTGG+GGG | 0.626687 | 8_1:+36384834 | None:intergenic |
| TTGCCAGAAGGTGACATGGG+TGG | 0.627061 | 8_1:+36385498 | None:intergenic |
| TCAGGTGAAGCCGACAAAGG+AGG | 0.632119 | 8_1:+36386113 | None:intergenic |
| CCCAATCCAACTTACCATTG+GGG | 0.638578 | 8_1:+36384833 | None:intergenic |
| GATAGAGACGGAGATGAAGA+CGG | 0.638842 | 8_1:+36386701 | None:intergenic |
| TCGCAAGGGATCGAAGCAGA+TGG | 0.641118 | 8_1:-36386498 | Msa1191690:CDS |
| AGAACCCGTCTCTGCAAGGA+CGG | 0.642420 | 8_1:-36385714 | Msa1191690:CDS |
| TGAAAGGATGTGCTGTGAGT+CGG | 0.642861 | 8_1:-36386741 | Msa1191690:exon |
| AACTTCAACAGGAGATCCGG+TGG | 0.644927 | 8_1:+36386071 | None:intergenic |
| GTCGAAGTTGGAGATAGAGA+CGG | 0.650421 | 8_1:+36386689 | None:intergenic |
| CATGTGTGAATATGCTCATG+GGG | 0.652271 | 8_1:-36385769 | Msa1191690:CDS |
| GCAGAAGACGTGCTTGACCG+AGG | 0.653400 | 8_1:+36385600 | None:intergenic |
| TTTCACAAGTTCAAGCTTCG+GGG | 0.656993 | 8_1:+36386223 | None:intergenic |
| TGAGCTTGGGAACAATGGCG+AGG | 0.658801 | 8_1:-36384764 | Msa1191690:CDS |
| TGTGAAATGCCATTGCCAGA+AGG | 0.659354 | 8_1:+36385486 | None:intergenic |
| ATTACTTCCAGGAAGATGCA+AGG | 0.661108 | 8_1:+36385428 | None:intergenic |
| AAGGATGTGCTGTGAGTCGG+AGG | 0.661354 | 8_1:-36386738 | Msa1191690:exon |
| AGGGGCTGATCCTAATTCCG+TGG | 0.663243 | 8_1:-36386285 | Msa1191690:CDS |
| ATGGCTTCATTCGACCGGAG+CGG | 0.667016 | 8_1:+36385256 | None:intergenic |
| CATATTCATTCCCTCACCCG+AGG | 0.676171 | 8_1:+36384642 | None:intergenic |
| ACTGTCTCAACGCGACCCAG+TGG | 0.684708 | 8_1:+36384328 | None:intergenic |
| GAACCAGTTGAAACATACAA+TGG | 0.685763 | 8_1:+36385636 | None:intergenic |
| TGAGTATGATCCTACATCGG+TGG | 0.686854 | 8_1:-36386546 | Msa1191690:CDS |
| AGATTTGGATCAGCATATCG+AGG | 0.694701 | 8_1:+36385186 | None:intergenic |
| GTTGGATTGGGCTCACAATG+CGG | 0.696691 | 8_1:-36384821 | Msa1191690:CDS |
| GATTGAGTATGATCCTACAT+CGG | 0.700321 | 8_1:-36386549 | Msa1191690:CDS |
| AGGAGAGACAGAAAACCACT+GGG | 0.714994 | 8_1:-36384343 | Msa1191690:three_prime_UTR |
| CCATTGCCAGAAGGTGACAT+GGG | 0.719317 | 8_1:+36385495 | None:intergenic |
| CCTTACGAAAATCAGGACAA+GGG | 0.730105 | 8_1:+36385811 | None:intergenic |
| GCTTGCTGCTAATAACGACG+TGG | 0.738667 | 8_1:-36386588 | Msa1191690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAACAATTAATAGAAGA+AGG | + | chr8_1:36384189-36384208 | None:intergenic | 15.0% |
| !!! | TTTTTTTTAACTTGTTTTGT+TGG | - | chr8_1:36384368-36384387 | Msa1191690:three_prime_UTR | 15.0% |
| !!! | CAAAACAATAATTTGAAACA+TGG | + | chr8_1:36384111-36384130 | None:intergenic | 20.0% |
| !! | TAATAGAAGAAGGAAAAAAA+AGG | + | chr8_1:36384179-36384198 | None:intergenic | 20.0% |
| !!! | GCTGTTTGATTTTAATTTAA+AGG | - | chr8_1:36384243-36384262 | Msa1191690:three_prime_UTR | 20.0% |
| !!! | TCCTTTATTATTGTTGTTTT+TGG | - | chr8_1:36384297-36384316 | Msa1191690:three_prime_UTR | 20.0% |
| !!! | GAAAGTGATTATTTCTTTAT+CGG | - | chr8_1:36384973-36384992 | Msa1191690:CDS | 20.0% |
| !! | GAATAAACAATAACATCTAA+CGG | + | chr8_1:36385148-36385167 | None:intergenic | 20.0% |
| !! | AATGTTACATTAACTAAGAA+AGG | - | chr8_1:36386959-36386978 | Msa1191690:intron | 20.0% |
| !! | AACCTAAAAATTGAAAAGAT+TGG | + | chr8_1:36387115-36387134 | None:intergenic | 20.0% |
| !! | TAGAAAAACATGTTACAAAA+GGG | - | chr8_1:36387214-36387233 | Msa1191690:intron | 20.0% |
| !!! | TAATTTTGAACCAATAATTG+TGG | - | chr8_1:36387317-36387336 | Msa1191690:intron | 20.0% |
| !! | ACAATAATTTGAAACATGGT+TGG | + | chr8_1:36384107-36384126 | None:intergenic | 25.0% |
| ! | TTTAAAGAACCCTAAAAACA+AGG | + | chr8_1:36384152-36384171 | None:intergenic | 25.0% |
| ! | GCCAAAAACAACAATAATAA+AGG | + | chr8_1:36384301-36384320 | None:intergenic | 25.0% |
| ! | AAATTGACTAGAGAAGAAAA+AGG | + | chr8_1:36384490-36384509 | None:intergenic | 25.0% |
| ! | GAAGAAAAATTTGTATTCAC+TGG | + | chr8_1:36386306-36386325 | None:intergenic | 25.0% |
| ! | TCAATAATTCTTGGTCAAAA+TGG | - | chr8_1:36386529-36386548 | Msa1191690:CDS | 25.0% |
| ! | CAATAATTCTTGGTCAAAAT+GGG | - | chr8_1:36386530-36386549 | Msa1191690:CDS | 25.0% |
| !!! | TTTTGAAGTTTTGTTGTTGA+TGG | - | chr8_1:36386933-36386952 | Msa1191690:intron | 25.0% |
| !! | TGCCAATCTTTTCAATTTTT+AGG | - | chr8_1:36387110-36387129 | Msa1191690:intron | 25.0% |
| ! | GTAGAAAAACATGTTACAAA+AGG | - | chr8_1:36387213-36387232 | Msa1191690:intron | 25.0% |
| AGTAAGATTCACTTTCAACT+TGG | - | chr8_1:36384005-36384024 | Msa1191690:three_prime_UTR | 30.0% | |
| TTACGGAGATGAAAAAAACA+CGG | + | chr8_1:36384047-36384066 | None:intergenic | 30.0% | |
| !! | TTTGAAACATGGTTGGTTTA+AGG | + | chr8_1:36384100-36384119 | None:intergenic | 30.0% |
| !!! | AGAATGTTGTCCTTGTTTTT+AGG | - | chr8_1:36384139-36384158 | Msa1191690:three_prime_UTR | 30.0% |
| !!! | GAATGTTGTCCTTGTTTTTA+GGG | - | chr8_1:36384140-36384159 | Msa1191690:three_prime_UTR | 30.0% |
| GAAGATTGAGTTTACTTGAT+TGG | - | chr8_1:36384213-36384232 | Msa1191690:three_prime_UTR | 30.0% | |
| !!! | TCTGAAGGATTGGTTTTAAT+GGG | - | chr8_1:36384585-36384604 | Msa1191690:CDS | 30.0% |
| CTAAATCTCATGCAAATGAA+AGG | - | chr8_1:36384633-36384652 | Msa1191690:CDS | 30.0% | |
| ACCATGAATCACTTAACTAT+CGG | - | chr8_1:36384749-36384768 | Msa1191690:CDS | 30.0% | |
| ! | TTTTTCACAAGTTCAAGCTT+CGG | + | chr8_1:36385172-36385191 | None:intergenic | 30.0% |
| !!! | TATATGCTGTTTTTGATGTC+AGG | + | chr8_1:36385415-36385434 | None:intergenic | 30.0% |
| ATTCCGAATGTATTCTTTCA+AGG | - | chr8_1:36385447-36385466 | Msa1191690:CDS | 30.0% | |
| CAATGCTAGAGATATTCATA+TGG | - | chr8_1:36386014-36386033 | Msa1191690:CDS | 30.0% | |
| ! | TTGTTGCTGTTGATCATAAT+CGG | + | chr8_1:36386058-36386077 | None:intergenic | 30.0% |
| CTGTTAGAATTAATATGACG+TGG | + | chr8_1:36386108-36386127 | None:intergenic | 30.0% | |
| !! | TCAAGATTTGATGGATTCAA+TGG | + | chr8_1:36386156-36386175 | None:intergenic | 30.0% |
| AAGAGATCATCAAGATTTGA+TGG | + | chr8_1:36386165-36386184 | None:intergenic | 30.0% | |
| AAAACAGTTGAAGTCAGATT+TGG | + | chr8_1:36386222-36386241 | None:intergenic | 30.0% | |
| TGTTGATCATCATTTATTGC+AGG | - | chr8_1:36386332-36386351 | Msa1191690:CDS | 30.0% | |
| AATTTCTCTTTGATCTCAGT+TGG | + | chr8_1:36386693-36386712 | None:intergenic | 30.0% | |
| AACTGAGATCAAAGAGAAAT+TGG | - | chr8_1:36386692-36386711 | Msa1191690:CDS | 30.0% | |
| AATGAATATGAGCACACAAA+TGG | - | chr8_1:36386761-36386780 | Msa1191690:intron | 30.0% | |
| GAAGCAGAAAGTAAAAGAAT+GGG | - | chr8_1:36386981-36387000 | Msa1191690:intron | 30.0% | |
| TCTCAAGTTTAGTGTTACAA+AGG | - | chr8_1:36387017-36387036 | Msa1191690:intron | 30.0% | |
| AGTGTTACAAAGGTAACTTT+AGG | - | chr8_1:36387027-36387046 | Msa1191690:intron | 30.0% | |
| ! | ATTTCCTCAAATCTCCATTT+TGG | - | chr8_1:36387249-36387268 | Msa1191690:intron | 30.0% |
| ACATTTGAAGATTGATCCTT+TGG | - | chr8_1:36387364-36387383 | Msa1191690:intron | 30.0% | |
| CATTTGAAGATTGATCCTTT+GGG | - | chr8_1:36387365-36387384 | Msa1191690:intron | 30.0% | |
| ! | CCAAGTTGTAGCATGTTTTA+CGG | + | chr8_1:36384064-36384083 | None:intergenic | 35.0% |
| GATTGAGTTTACTTGATTGG+TGG | - | chr8_1:36384216-36384235 | Msa1191690:three_prime_UTR | 35.0% | |
| !!! | TTAACTTGTTTTGTTGGCAG+AGG | - | chr8_1:36384374-36384393 | Msa1191690:three_prime_UTR | 35.0% |
| ! | TTTTTCCATGCTCTGTTAAG+TGG | - | chr8_1:36384407-36384426 | Msa1191690:three_prime_UTR | 35.0% |
| ATTCTTAGTTGTGTGAAGTG+TGG | - | chr8_1:36384511-36384530 | Msa1191690:three_prime_UTR | 35.0% | |
| ! | TTTTGCATGTTTGTCTCTGA+AGG | - | chr8_1:36384570-36384589 | Msa1191690:CDS | 35.0% |
| !!! | CTCTGAAGGATTGGTTTTAA+TGG | - | chr8_1:36384584-36384603 | Msa1191690:CDS | 35.0% |
| !!! | TGGTTTTAATGGGTTTGTTG+TGG | - | chr8_1:36384595-36384614 | Msa1191690:CDS | 35.0% |
| TAGTTAAGTGATTCATGGTG+TGG | + | chr8_1:36384748-36384767 | None:intergenic | 35.0% | |
| ACCGATAGTTAAGTGATTCA+TGG | + | chr8_1:36384753-36384772 | None:intergenic | 35.0% | |
| GATTGAGTATGATCCTACAT+CGG | - | chr8_1:36384841-36384860 | Msa1191690:CDS | 35.0% | |
| TATCGGATGTTGATATCAAC+AGG | - | chr8_1:36384990-36385009 | Msa1191690:CDS | 35.0% | |
| ! | TTTTCACAAGTTCAAGCTTC+GGG | + | chr8_1:36385171-36385190 | None:intergenic | 35.0% |
| ACTTGTGAAAAACAGTCTTG+AGG | - | chr8_1:36385180-36385199 | Msa1191690:CDS | 35.0% | |
| TTCTTATTCTCCTCCTTTGT+CGG | - | chr8_1:36385267-36385286 | Msa1191690:CDS | 35.0% | |
| ! | CAATTGACTTCAACTTCAAC+AGG | + | chr8_1:36385333-36385352 | None:intergenic | 35.0% |
| GGACCTTGAAAGAATACATT+CGG | + | chr8_1:36385453-36385472 | None:intergenic | 35.0% | |
| ACATGTGTGAATATGCTCAT+GGG | - | chr8_1:36385620-36385639 | Msa1191690:CDS | 35.0% | |
| GAACCAGTTGAAACATACAA+TGG | + | chr8_1:36385757-36385776 | None:intergenic | 35.0% | |
| AATTAATATGACGTGGAGAC+AGG | + | chr8_1:36386101-36386120 | None:intergenic | 35.0% | |
| TGATCATCATTTATTGCAGG+CGG | - | chr8_1:36386335-36386354 | Msa1191690:CDS | 35.0% | |
| GCTCAAATGAAGATGATCTA+CGG | + | chr8_1:36386611-36386630 | None:intergenic | 35.0% | |
| AGATCATCTTCATTTGAGCT+TGG | - | chr8_1:36386612-36386631 | Msa1191690:CDS | 35.0% | |
| GATCATCTTCATTTGAGCTT+GGG | - | chr8_1:36386613-36386632 | Msa1191690:CDS | 35.0% | |
| TCTGTTGATCATGCTGTATT+GGG | - | chr8_1:36386786-36386805 | Msa1191690:intron | 35.0% | |
| GGAAGCAGAAAGTAAAAGAA+TGG | - | chr8_1:36386980-36386999 | Msa1191690:intron | 35.0% | |
| TCAAGGAAGCAAAAAATGAC+AGG | + | chr8_1:36387144-36387163 | None:intergenic | 35.0% | |
| !!! | TGTCATTTTTTGCTTCCTTG+AGG | - | chr8_1:36387143-36387162 | Msa1191690:intron | 35.0% |
| GATTAAACATTTGCTCCTCA+AGG | + | chr8_1:36387161-36387180 | None:intergenic | 35.0% | |
| ACATGTTACAAAAGGGTCAT+TGG | - | chr8_1:36387221-36387240 | Msa1191690:intron | 35.0% | |
| ATTGAATGTTACATGCCCAA+AGG | + | chr8_1:36387383-36387402 | None:intergenic | 35.0% | |
| CCGTAAAACATGCTACAACT+TGG | - | chr8_1:36384061-36384080 | Msa1191690:three_prime_UTR | 40.0% | |
| ! | CATGTTTGTCTCTGAAGGAT+TGG | - | chr8_1:36384575-36384594 | Msa1191690:CDS | 40.0% |
| TGAGAATTGTGTGTCGAAGT+TGG | + | chr8_1:36384716-36384735 | None:intergenic | 40.0% | |
| TGATTCATGGTGTGGTTTCT+CGG | + | chr8_1:36384740-36384759 | None:intergenic | 40.0% | |
| TATTAGCAGCAAGCTCAAGA+AGG | + | chr8_1:36384796-36384815 | None:intergenic | 40.0% | |
| GATGAGGTTGGATTATGGTA+TGG | - | chr8_1:36384866-36384885 | Msa1191690:CDS | 40.0% | |
| TATGTAGCAGCAACCATCAA+CGG | + | chr8_1:36384935-36384954 | None:intergenic | 40.0% | |
| ! | TTGATGGTTGCTGCTACATA+TGG | - | chr8_1:36384935-36384954 | Msa1191690:CDS | 40.0% |
| TTTCACAAGTTCAAGCTTCG+GGG | + | chr8_1:36385170-36385189 | None:intergenic | 40.0% | |
| GAGGAGCTACTTCAAATTGA+TGG | - | chr8_1:36385199-36385218 | Msa1191690:CDS | 40.0% | |
| !! | TAGTGCTGGCTGTAATCTTA+GGG | - | chr8_1:36385225-36385244 | Msa1191690:CDS | 40.0% |
| TTCAACTTCAACAGGAGATC+CGG | + | chr8_1:36385325-36385344 | None:intergenic | 40.0% | |
| ! | TTTTTGATGTCAGGAAGGGA+TGG | + | chr8_1:36385406-36385425 | None:intergenic | 40.0% |
| !!! | GCTGTTTTTGATGTCAGGAA+GGG | + | chr8_1:36385410-36385429 | None:intergenic | 40.0% |
| !!! | TGCTGTTTTTGATGTCAGGA+AGG | + | chr8_1:36385411-36385430 | None:intergenic | 40.0% |
| ! | AATGCCCTTTTGTTCATCCA+GGG | - | chr8_1:36385509-36385528 | Msa1191690:CDS | 40.0% |
| AGCTGTAGTGATACTTTCTC+GGG | + | chr8_1:36385555-36385574 | None:intergenic | 40.0% | |
| CAGCTGTAGTGATACTTTCT+CGG | + | chr8_1:36385556-36385575 | None:intergenic | 40.0% | |
| CCTTACGAAAATCAGGACAA+GGG | + | chr8_1:36385582-36385601 | None:intergenic | 40.0% | |
| ! | CCTTGTCCTGATTTTCGTAA+GGG | - | chr8_1:36385580-36385599 | Msa1191690:CDS | 40.0% |
| GACATGTGTGAATATGCTCA+TGG | - | chr8_1:36385619-36385638 | Msa1191690:CDS | 40.0% | |
| CATGTGTGAATATGCTCATG+GGG | - | chr8_1:36385621-36385640 | Msa1191690:CDS | 40.0% | |
| !! | GTATGTTTCAACTGGTTCTG+CGG | - | chr8_1:36385759-36385778 | Msa1191690:CDS | 40.0% |
| TTTCACACAACTCTGTTGCT+TGG | - | chr8_1:36385920-36385939 | Msa1191690:CDS | 40.0% | |
| ATTACTTCCAGGAAGATGCA+AGG | + | chr8_1:36385965-36385984 | None:intergenic | 40.0% | |
| CTAGACTGAAGATTACTTCC+AGG | + | chr8_1:36385976-36385995 | None:intergenic | 40.0% | |
| GCAACAACTCCTTAATGAGT+TGG | - | chr8_1:36386071-36386090 | Msa1191690:CDS | 40.0% | |
| ATTCAATGGCTTCATTCGAC+CGG | + | chr8_1:36386142-36386161 | None:intergenic | 40.0% | |
| ATATCGAGGAGAAGAACTCT+CGG | + | chr8_1:36386193-36386212 | None:intergenic | 40.0% | |
| AGATTTGGATCAGCATATCG+AGG | + | chr8_1:36386207-36386226 | None:intergenic | 40.0% | |
| !! | AAGACAGCTGATTTGTGAGT+CGG | + | chr8_1:36386249-36386268 | None:intergenic | 40.0% |
| CTGGCTCAGTCAATAATTCT+TGG | - | chr8_1:36386520-36386539 | Msa1191690:CDS | 40.0% | |
| TCATTTGAGCTTGGGAACAA+TGG | - | chr8_1:36386621-36386640 | Msa1191690:CDS | 40.0% | |
| AAATTGGCAACTTCCATCTC+AGG | - | chr8_1:36386708-36386727 | Msa1191690:CDS | 40.0% | |
| GTCTGTTGATCATGCTGTAT+TGG | - | chr8_1:36386785-36386804 | Msa1191690:intron | 40.0% | |
| ATCATGCTGTATTGGGAACA+TGG | - | chr8_1:36386793-36386812 | Msa1191690:intron | 40.0% | |
| CAAGGCAGTTAACAACTGAA+AGG | - | chr8_1:36386884-36386903 | Msa1191690:intron | 40.0% | |
| GCAGAAAGTAAAAGAATGGG+AGG | - | chr8_1:36386984-36387003 | Msa1191690:intron | 40.0% | |
| TGGACCAAAATGGAGATTTG+AGG | + | chr8_1:36387256-36387275 | None:intergenic | 40.0% | |
| !! | TCTCCATTTTGGTCCAGTTT+TGG | - | chr8_1:36387260-36387279 | Msa1191690:intron | 40.0% |
| !! | CTCCATTTTGGTCCAGTTTT+GGG | - | chr8_1:36387261-36387280 | Msa1191690:intron | 40.0% |
| !! | TCCATTTTGGTCCAGTTTTG+GGG | - | chr8_1:36387262-36387281 | Msa1191690:intron | 40.0% |
| TTTGGGGATGATACAGGATT+TGG | - | chr8_1:36387278-36387297 | Msa1191690:intron | 40.0% | |
| AACCAATAATTGTGGATGCC+AGG | - | chr8_1:36387325-36387344 | Msa1191690:intron | 40.0% | |
| ACCAATAATTGTGGATGCCA+GGG | - | chr8_1:36387326-36387345 | Msa1191690:intron | 40.0% | |
| TCACACCACTTAACAGAGCA+TGG | + | chr8_1:36384415-36384434 | None:intergenic | 45.0% | |
| TGAAAGGATGTGCTGTGAGT+CGG | - | chr8_1:36384649-36384668 | Msa1191690:CDS | 45.0% | |
| GATAGAGACGGAGATGAAGA+CGG | + | chr8_1:36384692-36384711 | None:intergenic | 45.0% | |
| GTCGAAGTTGGAGATAGAGA+CGG | + | chr8_1:36384704-36384723 | None:intergenic | 45.0% | |
| CTGCTAATAACGACGTGGAA+GGG | - | chr8_1:36384807-36384826 | Msa1191690:CDS | 45.0% | |
| TGAGTATGATCCTACATCGG+TGG | - | chr8_1:36384844-36384863 | Msa1191690:CDS | 45.0% | |
| ATTATGGTATGGTCGTCGCA+AGG | - | chr8_1:36384877-36384896 | Msa1191690:CDS | 45.0% | |
| TTATGGTATGGTCGTCGCAA+GGG | - | chr8_1:36384878-36384897 | Msa1191690:CDS | 45.0% | |
| AGCAGATGGTCAATGAGCAA+AGG | - | chr8_1:36384906-36384925 | Msa1191690:CDS | 45.0% | |
| GTTGATATCAACAGGCCTTG+TGG | - | chr8_1:36384998-36385017 | Msa1191690:CDS | 45.0% | |
| CCTAATTCCGTGGATGCTAA+CGG | - | chr8_1:36385115-36385134 | Msa1191690:CDS | 45.0% | |
| CTAATTCCGTGGATGCTAAC+GGG | - | chr8_1:36385116-36385135 | Msa1191690:CDS | 45.0% | |
| TAATTCCGTGGATGCTAACG+GGG | - | chr8_1:36385117-36385136 | Msa1191690:CDS | 45.0% | |
| ! | CAAATTGATGGTCCTAGTGC+TGG | - | chr8_1:36385211-36385230 | Msa1191690:CDS | 45.0% |
| CTAAGATTACAGCCAGCACT+AGG | + | chr8_1:36385226-36385245 | None:intergenic | 45.0% | |
| !! | CTAGTGCTGGCTGTAATCTT+AGG | - | chr8_1:36385224-36385243 | Msa1191690:CDS | 45.0% |
| TCTTTCTTCTCAGATCCAGC+AGG | + | chr8_1:36385370-36385389 | None:intergenic | 45.0% | |
| AATAAGCACGCGAACAAGGT+CGG | + | chr8_1:36385474-36385493 | None:intergenic | 45.0% | |
| ! | AGGGCATTCAGTCCAATCAT+GGG | + | chr8_1:36385497-36385516 | None:intergenic | 45.0% |
| !! | AAGGGCATTCAGTCCAATCA+TGG | + | chr8_1:36385498-36385517 | None:intergenic | 45.0% |
| ! | GAATGCCCTTTTGTTCATCC+AGG | - | chr8_1:36385508-36385527 | Msa1191690:CDS | 45.0% |
| ! | ATGCCCTTTTGTTCATCCAG+GGG | - | chr8_1:36385510-36385529 | Msa1191690:CDS | 45.0% |
| TCTCCCCTGGATGAACAAAA+GGG | + | chr8_1:36385516-36385535 | None:intergenic | 45.0% | |
| TTCTCCCCTGGATGAACAAA+AGG | + | chr8_1:36385517-36385536 | None:intergenic | 45.0% | |
| ! | CCCTTGTCCTGATTTTCGTA+AGG | - | chr8_1:36385579-36385598 | Msa1191690:CDS | 45.0% |
| CCCTTACGAAAATCAGGACA+AGG | + | chr8_1:36385583-36385602 | None:intergenic | 45.0% | |
| CAAGCACCCTTACGAAAATC+AGG | + | chr8_1:36385589-36385608 | None:intergenic | 45.0% | |
| !!! | ATTTTCGTAAGGGTGCTTGC+CGG | - | chr8_1:36385590-36385609 | Msa1191690:CDS | 45.0% |
| ! | AGACGGGTTCTATATTGTGC+AGG | + | chr8_1:36385667-36385686 | None:intergenic | 45.0% |
| ATATAGAACCCGTCTCTGCA+AGG | - | chr8_1:36385672-36385691 | Msa1191690:CDS | 45.0% | |
| AGGACGGTACAAATTGTTCC+AGG | - | chr8_1:36385692-36385711 | Msa1191690:CDS | 45.0% | |
| CGGCCATTGTATGTTTCAAC+TGG | - | chr8_1:36385751-36385770 | Msa1191690:CDS | 45.0% | |
| GACATGACAGACATCGAAGA+AGG | + | chr8_1:36385856-36385875 | None:intergenic | 45.0% | |
| TGTGAAATGCCATTGCCAGA+AGG | + | chr8_1:36385907-36385926 | None:intergenic | 45.0% | |
| ACAGGCATGCCAACTCATTA+AGG | + | chr8_1:36386083-36386102 | None:intergenic | 45.0% | |
| TTATTGCAGGCGGCTTCTTA+TGG | - | chr8_1:36386345-36386364 | Msa1191690:CDS | 45.0% | |
| TCTTATGGTGTTCAGCCATC+AGG | - | chr8_1:36386360-36386379 | Msa1191690:CDS | 45.0% | |
| AAGAATGTCTCCACGAAACG+TGG | - | chr8_1:36386383-36386402 | Msa1191690:CDS | 45.0% | |
| GTGGAACCTATCTCTCCAAT+GGG | - | chr8_1:36386402-36386421 | Msa1191690:CDS | 45.0% | |
| ATTGACATCCTTGAGCCCAT+TGG | + | chr8_1:36386420-36386439 | None:intergenic | 45.0% | |
| TCAAAATGGGAATCCCCCAA+TGG | - | chr8_1:36386543-36386562 | Msa1191690:CDS | 45.0% | |
| CCAATCCAACTTACCATTGG+GGG | + | chr8_1:36386559-36386578 | None:intergenic | 45.0% | |
| CCCAATCCAACTTACCATTG+GGG | + | chr8_1:36386560-36386579 | None:intergenic | 45.0% | |
| ! | CCCCAATGGTAAGTTGGATT+GGG | - | chr8_1:36386557-36386576 | Msa1191690:CDS | 45.0% |
| GCCCAATCCAACTTACCATT+GGG | + | chr8_1:36386561-36386580 | None:intergenic | 45.0% | |
| AGCCCAATCCAACTTACCAT+TGG | + | chr8_1:36386562-36386581 | None:intergenic | 45.0% | |
| CGAGGAGCCTGATTTATCAT+GGG | - | chr8_1:36386644-36386663 | Msa1191690:CDS | 45.0% | |
| GACTGCACCCATGATAAATC+AGG | + | chr8_1:36386654-36386673 | None:intergenic | 45.0% | |
| GATGCAGCTTGATCATCTTG+TGG | - | chr8_1:36386824-36386843 | Msa1191690:intron | 45.0% | |
| ! | AATGAGTTTTGCTGACCCTG+AGG | - | chr8_1:36386861-36386880 | Msa1191690:intron | 45.0% |
| TTGTTAACTGCCTTGCCTCA+GGG | + | chr8_1:36386879-36386898 | None:intergenic | 45.0% | |
| TAGGAGAGACAGAAAACCAC+TGG | - | chr8_1:36387046-36387065 | Msa1191690:intron | 45.0% | |
| AGGAGAGACAGAAAACCACT+GGG | - | chr8_1:36387047-36387066 | Msa1191690:intron | 45.0% | |
| AGATTGGCAGCCAAAAAACC+CGG | + | chr8_1:36387099-36387118 | None:intergenic | 45.0% | |
| TCCCCAAAACTGGACCAAAA+TGG | + | chr8_1:36387266-36387285 | None:intergenic | 45.0% | |
| !!! | TCCAGTTTTGGGGATGATAC+AGG | - | chr8_1:36387272-36387291 | Msa1191690:intron | 45.0% |
| TCCTGTATCATCCCCAAAAC+TGG | + | chr8_1:36387276-36387295 | None:intergenic | 45.0% | |
| CCAATAATTGTGGATGCCAG+GGG | - | chr8_1:36387327-36387346 | Msa1191690:intron | 45.0% | |
| ! | GCTTGCTGCTAATAACGACG+TGG | - | chr8_1:36384802-36384821 | Msa1191690:CDS | 50.0% |
| GCTGCTAATAACGACGTGGA+AGG | - | chr8_1:36384806-36384825 | Msa1191690:CDS | 50.0% | |
| TGATCCTACATCGGTGGATG+AGG | - | chr8_1:36384850-36384869 | Msa1191690:CDS | 50.0% | |
| CGGTGGATGAGGTTGGATTA+TGG | - | chr8_1:36384861-36384880 | Msa1191690:CDS | 50.0% | |
| GAAGAGCAGTGCTCTTGTCA+AGG | + | chr8_1:36385024-36385043 | None:intergenic | 50.0% | |
| ! | AACAGCATTTTCAGCCCCAC+CGG | + | chr8_1:36385059-36385078 | None:intergenic | 50.0% |
| TGAAGCTGCTTCTTGCAGCA+GGG | - | chr8_1:36385086-36385105 | Msa1191690:CDS | 50.0% | |
| CCGTTAGCATCCACGGAATT+AGG | + | chr8_1:36385118-36385137 | None:intergenic | 50.0% | |
| TTCTCAGGTGAAGCCGACAA+AGG | + | chr8_1:36385283-36385302 | None:intergenic | 50.0% | |
| !! | TTGTCGGCTTCACCTGAGAA+CGG | - | chr8_1:36385283-36385302 | Msa1191690:CDS | 50.0% |
| AACTTCAACAGGAGATCCGG+TGG | + | chr8_1:36385322-36385341 | None:intergenic | 50.0% | |
| CAGATCCAGCAGGAGAAAGA+GGG | + | chr8_1:36385360-36385379 | None:intergenic | 50.0% | |
| TCAGATCCAGCAGGAGAAAG+AGG | + | chr8_1:36385361-36385380 | None:intergenic | 50.0% | |
| TCAGGAAGGGATGGATCAAC+AGG | + | chr8_1:36385397-36385416 | None:intergenic | 50.0% | |
| TGGGAATAAGCACGCGAACA+AGG | + | chr8_1:36385478-36385497 | None:intergenic | 50.0% | |
| CGCGTGCTTATTCCCATGAT+TGG | - | chr8_1:36385482-36385501 | Msa1191690:CDS | 50.0% | |
| ACTTTCTCGGGTCCCTTCTT+CGG | + | chr8_1:36385543-36385562 | None:intergenic | 50.0% | |
| TTGTACCGTCCTTGCAGAGA+CGG | + | chr8_1:36385684-36385703 | None:intergenic | 50.0% | |
| GGCAAAGAAGCAAACTCTCC+TGG | + | chr8_1:36385713-36385732 | None:intergenic | 50.0% | |
| TACAATGGCCGAAGCTCTTC+AGG | + | chr8_1:36385742-36385761 | None:intergenic | 50.0% | |
| CATGGCTGCAGCAAAATCCA+TGG | + | chr8_1:36385815-36385834 | None:intergenic | 50.0% | |
| ATGGGTGGAGTGAATGGTGA+AGG | + | chr8_1:36385880-36385899 | None:intergenic | 50.0% | |
| CCATTGCCAGAAGGTGACAT+GGG | + | chr8_1:36385898-36385917 | None:intergenic | 50.0% | |
| AGATGCAAGGCTGGGATGTT+TGG | + | chr8_1:36385952-36385971 | None:intergenic | 50.0% | |
| TTCCAGGAAGATGCAAGGCT+GGG | + | chr8_1:36385960-36385979 | None:intergenic | 50.0% | |
| TCTAACAGTCTTAGCCGCTC+CGG | - | chr8_1:36386120-36386139 | Msa1191690:CDS | 50.0% | |
| CGTGGAGACATTCTTCCTGA+TGG | + | chr8_1:36386378-36386397 | None:intergenic | 50.0% | |
| GAGATAGGTTCCACGTTTCG+TGG | + | chr8_1:36386396-36386415 | None:intergenic | 50.0% | |
| CGTGGAACCTATCTCTCCAA+TGG | - | chr8_1:36386401-36386420 | Msa1191690:CDS | 50.0% | |
| CTTGAGCCCATTGGAGAGAT+AGG | + | chr8_1:36386411-36386430 | None:intergenic | 50.0% | |
| ! | CTATCTCTCCAATGGGCTCA+AGG | - | chr8_1:36386409-36386428 | Msa1191690:CDS | 50.0% |
| GGAATCCCCCAATGGTAAGT+TGG | - | chr8_1:36386551-36386570 | Msa1191690:CDS | 50.0% | |
| ! | CCCCCAATGGTAAGTTGGAT+TGG | - | chr8_1:36386556-36386575 | Msa1191690:CDS | 50.0% |
| ! | GTTGGATTGGGCTCACAATG+CGG | - | chr8_1:36386569-36386588 | Msa1191690:CDS | 50.0% |
| GCTCACAATGCGGATGATGT+TGG | - | chr8_1:36386579-36386598 | Msa1191690:CDS | 50.0% | |
| GCGAGGAGCCTGATTTATCA+TGG | - | chr8_1:36386643-36386662 | Msa1191690:CDS | 50.0% | |
| CATATTCATTCCCTCACCCG+AGG | + | chr8_1:36386751-36386770 | None:intergenic | 50.0% | |
| GTTGTTAACTGCCTTGCCTC+AGG | + | chr8_1:36386880-36386899 | None:intergenic | 50.0% | |
| GAGACAGTTAATGCCAACGC+CGG | - | chr8_1:36387077-36387096 | Msa1191690:intron | 50.0% | |
| AGACAGTTAATGCCAACGCC+GGG | - | chr8_1:36387078-36387097 | Msa1191690:intron | 50.0% | |
| !!! | AATGCCAACGCCGGGTTTTT+TGG | - | chr8_1:36387086-36387105 | Msa1191690:intron | 50.0% |
| CCCCTGGCATCCACAATTAT+TGG | + | chr8_1:36387330-36387349 | None:intergenic | 50.0% | |
| ATGCCAGGGGTCTGTTTATC+AGG | - | chr8_1:36387340-36387359 | Msa1191690:intron | 50.0% | |
| TGCCAGGGGTCTGTTTATCA+GGG | - | chr8_1:36387341-36387360 | Msa1191690:intron | 50.0% | |
| AAGGATGTGCTGTGAGTCGG+AGG | - | chr8_1:36384652-36384671 | Msa1191690:CDS | 55.0% | |
| AGGATGTGCTGTGAGTCGGA+GGG | - | chr8_1:36384653-36384672 | Msa1191690:CDS | 55.0% | |
| CCAACCTCATCCACCGATGT+AGG | + | chr8_1:36384857-36384876 | None:intergenic | 55.0% | |
| CCTACATCGGTGGATGAGGT+TGG | - | chr8_1:36384854-36384873 | Msa1191690:CDS | 55.0% | |
| TCGCAAGGGATCGAAGCAGA+TGG | - | chr8_1:36384892-36384911 | Msa1191690:CDS | 55.0% | |
| TGAGCAAAGGACGCCGTTGA+TGG | - | chr8_1:36384919-36384938 | Msa1191690:CDS | 55.0% | |
| GTGCTCTTGTCAAGGCCACA+AGG | + | chr8_1:36385016-36385035 | None:intergenic | 55.0% | |
| !! | GCTCTTCACTGTGCTGCTTC+CGG | - | chr8_1:36385037-36385056 | Msa1191690:CDS | 55.0% |
| !! | TTCACTGTGCTGCTTCCGGT+GGG | - | chr8_1:36385041-36385060 | Msa1191690:CDS | 55.0% |
| GTGAAGCTGCTTCTTGCAGC+AGG | - | chr8_1:36385085-36385104 | Msa1191690:CDS | 55.0% | |
| GAAGCTGCTTCTTGCAGCAG+GGG | - | chr8_1:36385087-36385106 | Msa1191690:CDS | 55.0% | |
| AGGGGCTGATCCTAATTCCG+TGG | - | chr8_1:36385105-36385124 | Msa1191690:CDS | 55.0% | |
| ACGATCCCCGTTAGCATCCA+CGG | + | chr8_1:36385125-36385144 | None:intergenic | 55.0% | |
| TCAGGTGAAGCCGACAAAGG+AGG | + | chr8_1:36385280-36385299 | None:intergenic | 55.0% | |
| !! | TGTCGGCTTCACCTGAGAAC+GGG | - | chr8_1:36385284-36385303 | Msa1191690:CDS | 55.0% |
| TTCAACAGGAGATCCGGTGG+TGG | + | chr8_1:36385319-36385338 | None:intergenic | 55.0% | |
| GAACTCCCTCTTTCTCCTGC+TGG | - | chr8_1:36385352-36385371 | Msa1191690:CDS | 55.0% | |
| AGGGGAGAATGCCCGAAGAA+GGG | - | chr8_1:36385528-36385547 | Msa1191690:CDS | 55.0% | |
| CTTTCTCGGGTCCCTTCTTC+GGG | + | chr8_1:36385542-36385561 | None:intergenic | 55.0% | |
| !!! | CTCATGGGGTTTTCGAGTGC+TGG | - | chr8_1:36385635-36385654 | Msa1191690:CDS | 55.0% |
| AGAACCCGTCTCTGCAAGGA+CGG | - | chr8_1:36385676-36385695 | Msa1191690:CDS | 55.0% | |
| TGTACCGTCCTTGCAGAGAC+GGG | + | chr8_1:36385683-36385702 | None:intergenic | 55.0% | |
| ! | CCGAAGCTCTTCAGGAGTGT+GGG | + | chr8_1:36385734-36385753 | None:intergenic | 55.0% |
| CCCACACTCCTGAAGAGCTT+CGG | - | chr8_1:36385731-36385750 | Msa1191690:CDS | 55.0% | |
| GTCAAGCACGTCTTCTGCCA+TGG | - | chr8_1:36385795-36385814 | Msa1191690:CDS | 55.0% | |
| TGAGCCAGGCAACATGCTCA+TGG | + | chr8_1:36385833-36385852 | None:intergenic | 55.0% | |
| GACATCGAAGAAGGTGAGCC+AGG | + | chr8_1:36385847-36385866 | None:intergenic | 55.0% | |
| GGTGACATGGGTGGAGTGAA+TGG | + | chr8_1:36385886-36385905 | None:intergenic | 55.0% | |
| ACTCCACCCATGTCACCTTC+TGG | - | chr8_1:36385889-36385908 | Msa1191690:CDS | 55.0% | |
| TTGCCAGAAGGTGACATGGG+TGG | + | chr8_1:36385895-36385914 | None:intergenic | 55.0% | |
| CCCATGTCACCTTCTGGCAA+TGG | - | chr8_1:36385895-36385914 | Msa1191690:CDS | 55.0% | |
| GCCATTGCCAGAAGGTGACA+TGG | + | chr8_1:36385899-36385918 | None:intergenic | 55.0% | |
| AAGGCTGGGATGTTTGGCTG+AGG | + | chr8_1:36385946-36385965 | None:intergenic | 55.0% | |
| ATCCCAGCCTTGCATCTTCC+TGG | - | chr8_1:36385955-36385974 | Msa1191690:CDS | 55.0% | |
| CTTCCAGGAAGATGCAAGGC+TGG | + | chr8_1:36385961-36385980 | None:intergenic | 55.0% | |
| ATGGCTTCATTCGACCGGAG+CGG | + | chr8_1:36386137-36386156 | None:intergenic | 55.0% | |
| GGGCTCAAGGATGTCAATGC+TGG | - | chr8_1:36386422-36386441 | Msa1191690:CDS | 55.0% | |
| AACTCCATGCTTGCAGCTGC+TGG | - | chr8_1:36386501-36386520 | Msa1191690:CDS | 55.0% | |
| TGAGCTTGGGAACAATGGCG+AGG | - | chr8_1:36386626-36386645 | Msa1191690:CDS | 55.0% | |
| ! | GTTTTGCTGACCCTGAGGCA+AGG | - | chr8_1:36386866-36386885 | Msa1191690:intron | 55.0% |
| GTCCCTGATAAACAGACCCC+TGG | + | chr8_1:36387346-36387365 | None:intergenic | 55.0% | |
| GACGGAGATGAAGACGGCAC+AGG | + | chr8_1:36384686-36384705 | None:intergenic | 60.0% | |
| !! | CTTCACTGTGCTGCTTCCGG+TGG | - | chr8_1:36385040-36385059 | Msa1191690:CDS | 60.0% |
| !! | TCACTGTGCTGCTTCCGGTG+GGG | - | chr8_1:36385042-36385061 | Msa1191690:CDS | 60.0% |
| GGAGAAGGAGACCCGTTCTC+AGG | + | chr8_1:36385298-36385317 | None:intergenic | 60.0% | |
| !! | AGGAGATCCGGTGGTGGAGA+AGG | + | chr8_1:36385313-36385332 | None:intergenic | 60.0% |
| CTTCTTCGGGCATTCTCCCC+TGG | + | chr8_1:36385529-36385548 | None:intergenic | 60.0% | |
| CAGGGGAGAATGCCCGAAGA+AGG | - | chr8_1:36385527-36385546 | Msa1191690:CDS | 60.0% | |
| ATTCACACATGTCCCCGCGC+CGG | + | chr8_1:36385612-36385631 | None:intergenic | 60.0% | |
| GCCGAAGCTCTTCAGGAGTG+TGG | + | chr8_1:36385735-36385754 | None:intergenic | 60.0% | |
| GTTCTGCGGTTCCCTCACCT+CGG | - | chr8_1:36385773-36385792 | Msa1191690:CDS | 60.0% | |
| GACGTGCTTGACCGAGGTGA+GGG | + | chr8_1:36385787-36385806 | None:intergenic | 60.0% | |
| AGACGTGCTTGACCGAGGTG+AGG | + | chr8_1:36385788-36385807 | None:intergenic | 60.0% | |
| GCAGAAGACGTGCTTGACCG+AGG | + | chr8_1:36385793-36385812 | None:intergenic | 60.0% | |
| GCAGCCATGAGCATGTTGCC+TGG | - | chr8_1:36385826-36385845 | Msa1191690:CDS | 60.0% | |
| AGCCTAAGCTTCCGCGAGCA+CGG | - | chr8_1:36386474-36386493 | Msa1191690:CDS | 60.0% | |
| TGGAGTTAGAGCCGTGCTCG+CGG | + | chr8_1:36386488-36386507 | None:intergenic | 60.0% | |
| TGAGCCAGCAGCTGCAAGCA+TGG | + | chr8_1:36386508-36386527 | None:intergenic | 60.0% | |
| ACTGTCTCAACGCGACCCAG+TGG | + | chr8_1:36387065-36387084 | None:intergenic | 60.0% | |
| GCAGCCAAAAAACCCGGCGT+TGG | + | chr8_1:36387093-36387112 | None:intergenic | 60.0% | |
| CGGGTCTCCTTCTCCACCAC+CGG | - | chr8_1:36385303-36385322 | Msa1191690:CDS | 65.0% | |
| AGCCGTGCTCGCGGAAGCTT+AGG | + | chr8_1:36386479-36386498 | None:intergenic | 65.0% | |
| AGCTGGCGCAGCACCTGAGA+TGG | + | chr8_1:36386724-36386743 | None:intergenic | 65.0% | |
| ! | ATCTCAGGTGCTGCGCCAGC+TGG | - | chr8_1:36386723-36386742 | Msa1191690:CDS | 65.0% |
| ! | TGCTGCGCCAGCTGGTTCCT+CGG | - | chr8_1:36386731-36386750 | Msa1191690:CDS | 65.0% |
| ! | CCAGCTGGTTCCTCGGGTGA+GGG | - | chr8_1:36386738-36386757 | Msa1191690:exon | 65.0% |
| !! | CGTAAGGGTGCTTGCCGGCG+CGG | - | chr8_1:36385595-36385614 | Msa1191690:CDS | 70.0% |
| !! | GTAAGGGTGCTTGCCGGCGC+GGG | - | chr8_1:36385596-36385615 | Msa1191690:CDS | 70.0% |
| !! | TAAGGGTGCTTGCCGGCGCG+GGG | - | chr8_1:36385597-36385616 | Msa1191690:CDS | 70.0% |
| ! | GCTGCGCCAGCTGGTTCCTC+GGG | - | chr8_1:36386732-36386751 | Msa1191690:CDS | 70.0% |
| ! | GCCAGCTGGTTCCTCGGGTG+AGG | - | chr8_1:36386737-36386756 | Msa1191690:CDS | 70.0% |
| CCCTCACCCGAGGAACCAGC+TGG | + | chr8_1:36386741-36386760 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 36384000 | 36387412 | 36384000 | ID=Msa1191690;Name=Msa1191690 |
| chr8_1 | mRNA | 36384000 | 36387412 | 36384000 | ID=Msa1191690-mRNA-1;Parent=Msa1191690;Name=Msa1191690-mRNA-1;_AED=0.08;_eAED=0.08;_QI=29|0|0.5|1|0|0|2|552|734 |
| chr8_1 | exon | 36384000 | 36386779 | 36384000 | ID=Msa1191690-mRNA-1:exon:11999;Parent=Msa1191690-mRNA-1 |
| chr8_1 | exon | 36387407 | 36387412 | 36387407 | ID=Msa1191690-mRNA-1:exon:11998;Parent=Msa1191690-mRNA-1 |
| chr8_1 | five_prime_UTR | 36387407 | 36387412 | 36387407 | ID=Msa1191690-mRNA-1:five_prime_utr;Parent=Msa1191690-mRNA-1 |
| chr8_1 | five_prime_UTR | 36386757 | 36386779 | 36386757 | ID=Msa1191690-mRNA-1:five_prime_utr;Parent=Msa1191690-mRNA-1 |
| chr8_1 | CDS | 36384552 | 36386756 | 36384552 | ID=Msa1191690-mRNA-1:cds;Parent=Msa1191690-mRNA-1 |
| chr8_1 | three_prime_UTR | 36384000 | 36384551 | 36384000 | ID=Msa1191690-mRNA-1:three_prime_utr;Parent=Msa1191690-mRNA-1 |
| Gene Sequence |
| Protein sequence |