Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199970 | XP_013446290.1 | 97.711 | 699 | 16 | 0 | 3 | 701 | 4 | 702 | 0.0 | 1420 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199970 | sp|Q9LYG9|MSL10_ARATH | 43.358 | 685 | 348 | 13 | 39 | 691 | 58 | 734 | 0.0 | 544 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1199970 | Msa1279420 | 0.817005 | 4.125794e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199970 | MtrunA17_Chr8g0369461 | 97.711 | 699 | 16 | 0 | 3 | 701 | 4 | 702 | 0.0 | 1420 |
| Msa1199970 | MtrunA17_Chr2g0300341 | 45.161 | 713 | 351 | 11 | 3 | 694 | 40 | 733 | 0.0 | 597 |
| Msa1199970 | MtrunA17_Chr3g0136141 | 43.413 | 668 | 335 | 12 | 46 | 687 | 76 | 726 | 4.29e-179 | 528 |
| Msa1199970 | MtrunA17_Chr3g0136211 | 42.962 | 682 | 342 | 12 | 46 | 690 | 92 | 763 | 9.50e-171 | 508 |
| Msa1199970 | MtrunA17_Chr3g0136161 | 44.925 | 601 | 307 | 12 | 103 | 690 | 175 | 764 | 1.97e-170 | 507 |
| Msa1199970 | MtrunA17_Chr1g0211561 | 39.281 | 695 | 353 | 11 | 54 | 697 | 241 | 917 | 4.73e-156 | 475 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199970 | AT5G12080.1 | 43.358 | 685 | 348 | 13 | 39 | 691 | 58 | 734 | 0.0 | 544 |
| Msa1199970 | AT5G12080.2 | 43.358 | 685 | 348 | 13 | 39 | 691 | 58 | 734 | 0.0 | 544 |
| Msa1199970 | AT5G12080.3 | 43.358 | 685 | 348 | 13 | 39 | 691 | 58 | 734 | 0.0 | 544 |
| Msa1199970 | AT5G19520.1 | 39.511 | 696 | 384 | 15 | 19 | 688 | 55 | 739 | 1.74e-163 | 489 |
| Msa1199970 | AT5G19520.2 | 39.511 | 696 | 384 | 15 | 19 | 688 | 55 | 739 | 1.74e-163 | 489 |
| Msa1199970 | AT1G53470.1 | 42.308 | 624 | 307 | 11 | 109 | 690 | 248 | 860 | 1.93e-161 | 488 |
| Msa1199970 | AT3G14810.1 | 42.951 | 610 | 313 | 8 | 113 | 690 | 253 | 859 | 2.04e-160 | 485 |
| Msa1199970 | AT1G78610.1 | 42.215 | 623 | 321 | 8 | 102 | 690 | 215 | 832 | 2.65e-159 | 481 |
| Msa1199970 | AT2G17010.1 | 41.519 | 619 | 325 | 10 | 105 | 690 | 276 | 890 | 3.01e-157 | 478 |
| Msa1199970 | AT2G17000.2 | 42.123 | 603 | 312 | 11 | 121 | 690 | 225 | 823 | 2.10e-148 | 453 |
| Msa1199970 | AT2G17000.1 | 42.123 | 603 | 312 | 11 | 121 | 690 | 225 | 823 | 2.76e-148 | 453 |
| Msa1199970 | AT3G14810.2 | 40.625 | 608 | 295 | 10 | 113 | 690 | 253 | 824 | 2.10e-140 | 432 |
| Msa1199970 | AT2G17010.2 | 37.867 | 375 | 196 | 10 | 105 | 446 | 276 | 646 | 2.58e-70 | 242 |
Find 130 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGATCTTCCTTTAGAAAT+TGG | 0.137575 | 8_1:-52281693 | Msa1199970:CDS |
| TCTAGGACTATTGATGATTT+TGG | 0.142127 | 8_1:-52284531 | Msa1199970:CDS |
| ACAGCATTCGTAATTGTTTA+TGG | 0.154236 | 8_1:-52285010 | Msa1199970:CDS |
| TCAATTGCATCACTCATTTC+TGG | 0.158373 | 8_1:+52280062 | None:intergenic |
| ACACCTTGTTGAGGAATTTA+TGG | 0.163154 | 8_1:+52284928 | None:intergenic |
| ATAACAAACATGCATTTATT+AGG | 0.169469 | 8_1:-52285182 | Msa1199970:CDS |
| GTTAATTATGTTAGGTCTTC+AGG | 0.186545 | 8_1:-52284567 | Msa1199970:CDS |
| GCTTAATTTGCACTAAATTA+TGG | 0.221013 | 8_1:-52278349 | Msa1199970:three_prime_UTR |
| TTTGAAGGTGCTCTTGAAAC+TGG | 0.257587 | 8_1:-52281724 | Msa1199970:CDS |
| TGGTTCGAGGAGGATTGATA+TGG | 0.264557 | 8_1:-52284649 | Msa1199970:CDS |
| ACCATAATTCTGGTGGTTAA+TGG | 0.274430 | 8_1:+52278610 | None:intergenic |
| CATGCATTTATTAGGGTTAG+AGG | 0.279036 | 8_1:-52285174 | Msa1199970:CDS |
| CAGGTTTGTCAACAATTTCT+AGG | 0.287188 | 8_1:-52284548 | Msa1199970:CDS |
| GGTTTGGAGATGGTGTTTAA+TGG | 0.296972 | 8_1:-52285153 | Msa1199970:CDS |
| CATCCTCTGATTCTTCTTCC+TGG | 0.298721 | 8_1:+52285342 | None:intergenic |
| GTAGTATTATACAACTAAAA+TGG | 0.302582 | 8_1:-52285654 | Msa1199970:exon |
| CATCTCACTCAAATGAATAT+TGG | 0.302722 | 8_1:-52278494 | Msa1199970:CDS |
| TCTGGTCCACCGGTCGAAAA+TGG | 0.304486 | 8_1:-52284756 | Msa1199970:CDS |
| TAACAAACATGCATTTATTA+GGG | 0.307026 | 8_1:-52285181 | Msa1199970:CDS |
| ACCATTAACCACCAGAATTA+TGG | 0.311068 | 8_1:-52278611 | Msa1199970:CDS |
| GTATTCAAGGATTCGAGATT+TGG | 0.323814 | 8_1:+52285469 | None:intergenic |
| CAACCCTAAACCTTCTTCTA+TGG | 0.328740 | 8_1:-52285585 | Msa1199970:CDS |
| TGCCTCCGGGTGTGGGGAGG+TGG | 0.332523 | 8_1:-52284689 | Msa1199970:CDS |
| GTGTCCATAGAAGAAGGTTT+AGG | 0.335239 | 8_1:+52285581 | None:intergenic |
| TACTTCTCTCACCATAATTC+TGG | 0.340683 | 8_1:+52278600 | None:intergenic |
| TATTAAGTTAATTAATGAAT+AGG | 0.340848 | 8_1:-52278316 | Msa1199970:three_prime_UTR |
| TCTAAACATATTAACATGTT+TGG | 0.347089 | 8_1:-52285228 | Msa1199970:CDS |
| CAGATCTTCCTTTAGAAATT+GGG | 0.353026 | 8_1:-52281692 | Msa1199970:CDS |
| AAGTTGTTGCACTGCTGTTT+TGG | 0.353295 | 8_1:+52281431 | None:intergenic |
| TGGAAGAAGATGAAGAGATT+TGG | 0.355511 | 8_1:-52284669 | Msa1199970:CDS |
| AAAAGCTTGTTAATTATGTT+AGG | 0.357821 | 8_1:-52284575 | Msa1199970:CDS |
| TGGAGAAGCTTAGACGGTTA+AGG | 0.358941 | 8_1:+52285495 | None:intergenic |
| TGTCCATAGAAGAAGGTTTA+GGG | 0.361650 | 8_1:+52285582 | None:intergenic |
| GAAGTTGAAGAAACTTAGTA+TGG | 0.366233 | 8_1:-52284625 | Msa1199970:CDS |
| TACTTACTTGGCACCAGGTT+TGG | 0.366451 | 8_1:+52284437 | None:intergenic |
| TTTGCCATCACACTATGCTT+TGG | 0.367635 | 8_1:+52278683 | None:intergenic |
| AATAATAATTGTGACCCTTT+TGG | 0.369704 | 8_1:-52281376 | Msa1199970:CDS |
| TTTGCTCTAGAGGGATGTTT+AGG | 0.372443 | 8_1:+52285521 | None:intergenic |
| TTGGTTAGTGAAAATTGTTT+TGG | 0.374026 | 8_1:-52284868 | Msa1199970:CDS |
| GGAGAAGCTTAGACGGTTAA+GGG | 0.374557 | 8_1:+52285496 | None:intergenic |
| AAGGTTTAGGGTTGTGTTGT+TGG | 0.374758 | 8_1:+52285594 | None:intergenic |
| GTTTGTTCTGTCACAATAAG+AGG | 0.375987 | 8_1:-52285206 | Msa1199970:CDS |
| ACCTTCAAAGAGTGGAAATA+TGG | 0.382658 | 8_1:+52281738 | None:intergenic |
| TAGAAACAAGAGTAGAAGTA+TGG | 0.384804 | 8_1:+52278285 | None:intergenic |
| ATTCGTAATTGTTTATGGTT+AGG | 0.385766 | 8_1:-52285005 | Msa1199970:CDS |
| TATTCAAGGATTCGAGATTT+GGG | 0.392191 | 8_1:+52285470 | None:intergenic |
| ATGGCAATGGTAACATTTAG+TGG | 0.397376 | 8_1:-52285134 | Msa1199970:CDS |
| TGCTTTGGATTCCAATACTT+TGG | 0.400245 | 8_1:+52278698 | None:intergenic |
| TGGAGAGTAGTGGTTCTGTT+TGG | 0.408314 | 8_1:-52284605 | Msa1199970:CDS |
| AGATGAAGAGATTTGGTTCG+AGG | 0.412885 | 8_1:-52284662 | Msa1199970:CDS |
| ATTTATTAGGGTTAGAGGTT+TGG | 0.413545 | 8_1:-52285169 | Msa1199970:CDS |
| TATGTGTTGGATGCATTGTC+TGG | 0.417172 | 8_1:-52284774 | Msa1199970:CDS |
| AGGCTTCTCTTGATGAGGTT+CGG | 0.417205 | 8_1:+52285541 | None:intergenic |
| ACCATATTTCCACTCTTTGA+AGG | 0.420079 | 8_1:-52281739 | Msa1199970:CDS |
| TTAGTGAGCAAGATTGCGTT+AGG | 0.423646 | 8_1:+52280110 | None:intergenic |
| ACTCAAATGAATATTGGAAA+TGG | 0.435631 | 8_1:-52278488 | Msa1199970:CDS |
| GAAGAGAATAACTTGAGGTT+CGG | 0.441585 | 8_1:+52285622 | None:intergenic |
| AAGGATTCGAGATTTGGGTT+TGG | 0.441587 | 8_1:+52285475 | None:intergenic |
| CAACGGTCTCCAATATCAAA+AGG | 0.442822 | 8_1:+52281228 | None:intergenic |
| TTCAACAATGTTGCCAAACC+TGG | 0.445464 | 8_1:-52284450 | Msa1199970:CDS |
| GAGGTGGATGGTTGTATTCA+AGG | 0.446525 | 8_1:+52285456 | None:intergenic |
| ATCGAAAGAGCATCCTTTGA+AGG | 0.453490 | 8_1:-52284724 | Msa1199970:CDS |
| CAATATTCATTTGAGTGAGA+TGG | 0.454096 | 8_1:+52278495 | None:intergenic |
| GAGTGAGATGGATTTCTTGA+GGG | 0.454915 | 8_1:+52278507 | None:intergenic |
| GGATTTCTTGAGGGAGAAGA+TGG | 0.463123 | 8_1:+52278516 | None:intergenic |
| TAGGGTTGTGTTGTTGGTCA+AGG | 0.463940 | 8_1:+52285600 | None:intergenic |
| AGGCACTTGCAAAACTGTCT+TGG | 0.470534 | 8_1:-52281280 | Msa1199970:CDS |
| GGGTTCAAAGACGATGCCTC+CGG | 0.475509 | 8_1:-52284703 | Msa1199970:CDS |
| AGTGCAATGATAGTCTCTAT+AGG | 0.476490 | 8_1:+52280017 | None:intergenic |
| AGAGTGAAATTAGTAGTGAA+TGG | 0.480411 | 8_1:-52284500 | Msa1199970:CDS |
| GTTTCTTTCGATAAAGAAAA+CGG | 0.480688 | 8_1:+52285079 | None:intergenic |
| TAGGATATCAGAACTCCTCT+TGG | 0.481998 | 8_1:-52278576 | Msa1199970:CDS |
| TTGAGAGCAAACCAAAGTAT+TGG | 0.485327 | 8_1:-52278709 | Msa1199970:CDS |
| TAGCAACTTCCATCACCAAA+AGG | 0.489311 | 8_1:+52281361 | None:intergenic |
| ACTTACCACCCAATTTCTAA+AGG | 0.492720 | 8_1:+52281684 | None:intergenic |
| CTTGATGAGGTTCGGTGTTG+TGG | 0.494184 | 8_1:+52285549 | None:intergenic |
| AAGACGATGCCTCCGGGTGT+GGG | 0.502898 | 8_1:-52284696 | Msa1199970:CDS |
| GTTTCAGTGTCCATAGAAGA+AGG | 0.503056 | 8_1:+52285575 | None:intergenic |
| CTAACCAACTTGAAAACAAA+CGG | 0.506164 | 8_1:+52285111 | None:intergenic |
| TTCTTCCACCTCCCCACACC+CGG | 0.507949 | 8_1:+52284684 | None:intergenic |
| TATAGGAGTTGTAACATCAA+TGG | 0.509480 | 8_1:+52280034 | None:intergenic |
| GTGTCTTCTTCTTCAGAGGT+AGG | 0.512031 | 8_1:+52285422 | None:intergenic |
| CGATGCCTCCGGGTGTGGGG+AGG | 0.515050 | 8_1:-52284692 | Msa1199970:CDS |
| TTGTGTCATTGACGGTGTCC+AGG | 0.516753 | 8_1:-52281208 | Msa1199970:intron |
| CGATAGCGACTATGAATACC+AGG | 0.518235 | 8_1:-52285360 | Msa1199970:CDS |
| GGATGCATTGTCTGGTCCAC+CGG | 0.518479 | 8_1:-52284766 | Msa1199970:CDS |
| TGTTTAGGCTTCTCTTGATG+AGG | 0.519840 | 8_1:+52285536 | None:intergenic |
| GGAAGAAGAATCAGAGGATG+AGG | 0.528727 | 8_1:-52285339 | Msa1199970:CDS |
| GGCAAAACAAATAGATCAAG+TGG | 0.534255 | 8_1:-52278666 | Msa1199970:CDS |
| TTGAAGGTGCTCTTGAAACT+GGG | 0.539718 | 8_1:-52281723 | Msa1199970:CDS |
| AGACGATGCCTCCGGGTGTG+GGG | 0.542932 | 8_1:-52284695 | Msa1199970:CDS |
| GTAGGTAGTTTGTTGCGAGG+TGG | 0.543035 | 8_1:+52285440 | None:intergenic |
| TGAAGAGATTTGGTTCGAGG+AGG | 0.543710 | 8_1:-52284659 | Msa1199970:CDS |
| GGAGACCGTTGTGTCATTGA+CGG | 0.544383 | 8_1:-52281216 | Msa1199970:CDS |
| TTAATAGGAGTTGCTTTCCA+AGG | 0.546937 | 8_1:-52281300 | Msa1199970:CDS |
| TAGGGTTAGAGGTTTGGAGA+TGG | 0.549132 | 8_1:-52285163 | Msa1199970:CDS |
| ATCGTCTTTGAACCCTTCAA+AGG | 0.553009 | 8_1:+52284711 | None:intergenic |
| GTAGTTTGTTGCGAGGTGGA+TGG | 0.556267 | 8_1:+52285444 | None:intergenic |
| TTGAGTGTCTTCTTCTTCAG+AGG | 0.558346 | 8_1:+52285418 | None:intergenic |
| GGTTCAAAGACGATGCCTCC+GGG | 0.560841 | 8_1:-52284702 | Msa1199970:CDS |
| AACGGTCTCCAATATCAAAA+GGG | 0.561853 | 8_1:+52281229 | None:intergenic |
| AGTTAATTAATGAATAGGAT+CGG | 0.563592 | 8_1:-52278311 | Msa1199970:three_prime_UTR |
| ATATATACTTACTTGGCACC+AGG | 0.571486 | 8_1:+52284432 | None:intergenic |
| ATCTTCCTTTAGAAATTGGG+TGG | 0.572304 | 8_1:-52281689 | Msa1199970:intron |
| TAATTATTTACAGATGATTG+TGG | 0.572993 | 8_1:-52280192 | Msa1199970:intron |
| TCGAAAGAGCATCCTTTGAA+GGG | 0.574957 | 8_1:-52284723 | Msa1199970:CDS |
| AGCAACTTCCATCACCAAAA+GGG | 0.577274 | 8_1:+52281362 | None:intergenic |
| GAGATGGTGTTTAATGGCAA+TGG | 0.579159 | 8_1:-52285147 | Msa1199970:CDS |
| TCAAGAGCACCTTCAAAGAG+TGG | 0.582307 | 8_1:+52281730 | None:intergenic |
| TCAGAAGAGATCTTGTATGT+AGG | 0.583061 | 8_1:+52285392 | None:intergenic |
| CTTGTATAAATCTTACATCC+CGG | 0.583954 | 8_1:-52285676 | None:intergenic |
| TGGGTTTGGAGAAGCTTAGA+CGG | 0.588604 | 8_1:+52285489 | None:intergenic |
| TGAGTGAGATGGATTTCTTG+AGG | 0.589719 | 8_1:+52278506 | None:intergenic |
| TTCTCTCACCATAATTCTGG+TGG | 0.590623 | 8_1:+52278603 | None:intergenic |
| CATGATGAAGACAAAGATGA+TGG | 0.594026 | 8_1:+52281254 | None:intergenic |
| GAATCCAAAGCATAGTGTGA+TGG | 0.621159 | 8_1:-52278687 | Msa1199970:CDS |
| ATACCAGGAAGAAGAATCAG+AGG | 0.622604 | 8_1:-52285345 | Msa1199970:CDS |
| TTTAGTTGTATAATACTACC+GGG | 0.637256 | 8_1:+52285658 | None:intergenic |
| TAGTGAGCAAGATTGCGTTA+GGG | 0.638961 | 8_1:+52280111 | None:intergenic |
| GAGGTAGGTAGTTTGTTGCG+AGG | 0.642897 | 8_1:+52285437 | None:intergenic |
| ATCAGAGGATGAGGACGACG+AGG | 0.643308 | 8_1:-52285330 | Msa1199970:CDS |
| TTCCACCTCCCCACACCCGG+AGG | 0.648589 | 8_1:+52284687 | None:intergenic |
| GTGCTTGAAACACCTTGTTG+AGG | 0.657441 | 8_1:+52284919 | None:intergenic |
| ATTATGGTGAGAGAAGTACT+AGG | 0.657963 | 8_1:-52278595 | Msa1199970:CDS |
| AAACTTAGTATGGAGAGTAG+TGG | 0.659135 | 8_1:-52284615 | Msa1199970:CDS |
| TCAGAGGATGAGGACGACGA+GGG | 0.689343 | 8_1:-52285329 | Msa1199970:CDS |
| TCCACCGGTCGAAAATGGCG+AGG | 0.689381 | 8_1:-52284751 | Msa1199970:CDS |
| TCAAGGAAGAGAATAACTTG+AGG | 0.689798 | 8_1:+52285617 | None:intergenic |
| AAACCATAAATTCCTCAACA+AGG | 0.693061 | 8_1:-52284931 | Msa1199970:CDS |
| GGACACCGTCAATGACACAA+CGG | 0.732774 | 8_1:+52281211 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTCTTTTTGAATTTA+AGG | + | chr8_1:52280248-52280267 | None:intergenic | 10.0% |
| !! | GAAAAAAATAAAAATGAAAA+AGG | + | chr8_1:52280664-52280683 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTAAACTGATATT+CGG | + | chr8_1:52281555-52281574 | None:intergenic | 10.0% |
| !!! | AATATTTTCTAATTTATTGA+AGG | - | chr8_1:52282120-52282139 | Msa1199970:intron | 10.0% |
| !!! | AAATTTATCTCTTTTTAATT+TGG | - | chr8_1:52282350-52282369 | Msa1199970:intron | 10.0% |
| !!! | AACAAAGTTTTATTAAAAAT+TGG | - | chr8_1:52283347-52283366 | Msa1199970:intron | 10.0% |
| !! | TATTAAGTTAATTAATGAAT+AGG | - | chr8_1:52285617-52285636 | Msa1199970:CDS | 10.0% |
| !!! | AAAGTTTTATATTTCATCTA+TGG | - | chr8_1:52278892-52278911 | Msa1199970:intron | 15.0% |
| !! | CAAAAATGTTGAAATTATTA+GGG | - | chr8_1:52279740-52279759 | Msa1199970:intron | 15.0% |
| !!! | TTCAAGTCTATTTTATTTTT+TGG | + | chr8_1:52279847-52279866 | None:intergenic | 15.0% |
| !!! | ATAAAGGTGATATATAATTT+TGG | + | chr8_1:52280501-52280520 | None:intergenic | 15.0% |
| !! | TATATATCACCTTTATATAT+TGG | - | chr8_1:52280505-52280524 | Msa1199970:intron | 15.0% |
| !!! | TTTTTTACTATGATATAGAA+GGG | + | chr8_1:52280801-52280820 | None:intergenic | 15.0% |
| !! | AGTAGTTATTATTCAAATAT+TGG | + | chr8_1:52280934-52280953 | None:intergenic | 15.0% |
| !! | AAAAAAAGAGAAATGTTATT+TGG | + | chr8_1:52281812-52281831 | None:intergenic | 15.0% |
| !! | AATTATTTATCTGTTGTATT+TGG | + | chr8_1:52281895-52281914 | None:intergenic | 15.0% |
| !! | TTATTTAAGAAAATATAAGG+TGG | + | chr8_1:52282102-52282121 | None:intergenic | 15.0% |
| !!! | TTTTTTCTAATAGATTAAGA+AGG | + | chr8_1:52283033-52283052 | None:intergenic | 15.0% |
| !!! | TTTTATTAAAAATTGGAGAT+GGG | - | chr8_1:52283354-52283373 | Msa1199970:intron | 15.0% |
| !!! | TCTATTTTATGAAAACTTAA+GGG | + | chr8_1:52284055-52284074 | None:intergenic | 15.0% |
| !!! | ATCTATTTTATGAAAACTTA+AGG | + | chr8_1:52284056-52284075 | None:intergenic | 15.0% |
| !! | TAATGAGTAAAATTGAAATT+TGG | - | chr8_1:52284362-52284381 | Msa1199970:intron | 15.0% |
| !! | AATGAGTAAAATTGAAATTT+GGG | - | chr8_1:52284363-52284382 | Msa1199970:intron | 15.0% |
| !! | TAAACATAAAGAAAATAGAA+AGG | - | chr8_1:52284405-52284424 | Msa1199970:intron | 15.0% |
| !! | AAACATAAAGAAAATAGAAA+GGG | - | chr8_1:52284406-52284425 | Msa1199970:intron | 15.0% |
| !!! | GGAATTAAATTTTCTTTTTT+TGG | - | chr8_1:52284442-52284461 | Msa1199970:intron | 15.0% |
| !! | ATCTACTTTATAAAAACTTA+AGG | - | chr8_1:52284710-52284729 | Msa1199970:CDS | 15.0% |
| !! | TCTACTTTATAAAAACTTAA+GGG | - | chr8_1:52284711-52284730 | Msa1199970:CDS | 15.0% |
| !! | AAGCATAATAAATAAAGAAA+GGG | + | chr8_1:52284814-52284833 | None:intergenic | 15.0% |
| !! | GCAACAAAAATAATTAAAAT+TGG | + | chr8_1:52285164-52285183 | None:intergenic | 15.0% |
| !!! | ACAAAAGATATATAAGTTTT+TGG | + | chr8_1:52285540-52285559 | None:intergenic | 15.0% |
| !!! | TTTTAGTTGTATAATACTAC+CGG | + | chr8_1:52278279-52278298 | None:intergenic | 20.0% |
| !! | GTAGTATTATACAACTAAAA+TGG | - | chr8_1:52278279-52278298 | Msa1199970:three_prime_UTR | 20.0% |
| !!! | AGAAAAAATTTAAAGTGAAG+TGG | - | chr8_1:52278656-52278675 | Msa1199970:CDS | 20.0% |
| !! | TCTAAACATATTAACATGTT+TGG | - | chr8_1:52278705-52278724 | Msa1199970:CDS | 20.0% |
| !! | ATAACAAACATGCATTTATT+AGG | - | chr8_1:52278751-52278770 | Msa1199970:intron | 20.0% |
| !! | TAACAAACATGCATTTATTA+GGG | - | chr8_1:52278752-52278771 | Msa1199970:intron | 20.0% |
| !!! | AAAAGCTTGTTAATTATGTT+AGG | - | chr8_1:52279358-52279377 | Msa1199970:intron | 20.0% |
| !! | AAGCAAAATATATACTTACT+TGG | + | chr8_1:52279511-52279530 | None:intergenic | 20.0% |
| !!! | TTAATTTTGTCTTTTCAAGT+TGG | - | chr8_1:52279600-52279619 | Msa1199970:intron | 20.0% |
| !!! | TTGGAGATAAAATTCATTTT+TGG | - | chr8_1:52279670-52279689 | Msa1199970:intron | 20.0% |
| !! | GCAAAAATGTTGAAATTATT+AGG | - | chr8_1:52279739-52279758 | Msa1199970:intron | 20.0% |
| !! | GATTGAAAATCATATATAAG+TGG | + | chr8_1:52279801-52279820 | None:intergenic | 20.0% |
| !!! | AAGTCTATTTTATTTTTTGG+TGG | + | chr8_1:52279844-52279863 | None:intergenic | 20.0% |
| !! | TATTATATGATATTCTCTCA+AGG | + | chr8_1:52280151-52280170 | None:intergenic | 20.0% |
| !!! | TTTTTACTATGATATAGAAG+GGG | + | chr8_1:52280800-52280819 | None:intergenic | 20.0% |
| !!! | GTTTTTTACTATGATATAGA+AGG | + | chr8_1:52280802-52280821 | None:intergenic | 20.0% |
| !! | AAATGCAATGTAGAAATAAA+TGG | + | chr8_1:52280983-52281002 | None:intergenic | 20.0% |
| !! | CATTTAATATTCTTCTCAAT+TGG | - | chr8_1:52280998-52281017 | Msa1199970:intron | 20.0% |
| !!! | GCAATGAACTATTTTTTTTA+TGG | - | chr8_1:52281602-52281621 | Msa1199970:intron | 20.0% |
| !!! | TTTTTATGGAAAATGATATG+TGG | - | chr8_1:52281616-52281635 | Msa1199970:intron | 20.0% |
| !!! | ATGATTTGTTTACTTTGTAT+TGG | + | chr8_1:52281756-52281775 | None:intergenic | 20.0% |
| !!! | TACAAATGCATTTTTTTGTT+AGG | - | chr8_1:52281956-52281975 | Msa1199970:intron | 20.0% |
| !!! | ACAAATGCATTTTTTTGTTA+GGG | - | chr8_1:52281957-52281976 | Msa1199970:intron | 20.0% |
| !!! | CGTAAAACAATCAATATTTT+TGG | - | chr8_1:52282017-52282036 | Msa1199970:intron | 20.0% |
| !! | TGCATATTAGTAGAAAAATA+CGG | - | chr8_1:52283127-52283146 | Msa1199970:intron | 20.0% |
| !! | TTAAATAAGTCATCTATTGT+AGG | - | chr8_1:52283166-52283185 | Msa1199970:intron | 20.0% |
| !!! | GTTTTATTAAAAATTGGAGA+TGG | - | chr8_1:52283353-52283372 | Msa1199970:intron | 20.0% |
| !! | TTAACTTTGATATGTCTTTA+AGG | + | chr8_1:52283507-52283526 | None:intergenic | 20.0% |
| !! | AGTTTATGATATATATGTCT+TGG | + | chr8_1:52283642-52283661 | None:intergenic | 20.0% |
| !! | TAATTATTTACAGATGATTG+TGG | - | chr8_1:52283741-52283760 | Msa1199970:intron | 20.0% |
| !!! | TGTCATTTTAATAAACTTCA+GGG | + | chr8_1:52283995-52284014 | None:intergenic | 20.0% |
| !!! | TGTAAGTTTTAAAAATAGAG+GGG | + | chr8_1:52284741-52284760 | None:intergenic | 20.0% |
| !!! | GTGTAAGTTTTAAAAATAGA+GGG | + | chr8_1:52284740-52284759 | None:intergenic | 20.0% |
| !!! | AGTGTAAGTTTTAAAAATAG+AGG | + | chr8_1:52284739-52284758 | None:intergenic | 20.0% |
| !! | ATGAGTAAAATTGAAATTTG+GGG | - | chr8_1:52284364-52284383 | Msa1199970:intron | 20.0% |
| !! | AGTAAGAAAAAATTGCAATT+CGG | - | chr8_1:52284486-52284505 | Msa1199970:CDS | 20.0% |
| !!! | AACTTGATGATAACTAATAA+TGG | - | chr8_1:52284538-52284557 | Msa1199970:CDS | 20.0% |
| !! | ATGATAACTAATAATGGTTA+TGG | - | chr8_1:52284544-52284563 | Msa1199970:CDS | 20.0% |
| !!! | AGTGTAAGTTTTAAAAATAG+AGG | - | chr8_1:52284739-52284758 | Msa1199970:CDS | 20.0% |
| !!! | GTGTAAGTTTTAAAAATAGA+GGG | - | chr8_1:52284740-52284759 | Msa1199970:CDS | 20.0% |
| !!! | TGTAAGTTTTAAAAATAGAG+GGG | - | chr8_1:52284741-52284760 | Msa1199970:CDS | 20.0% |
| !! | GAAGCATAATAAATAAAGAA+AGG | + | chr8_1:52284815-52284834 | None:intergenic | 20.0% |
| !! | AACAAGTAGAAAAAAGTAAA+GGG | + | chr8_1:52285077-52285096 | None:intergenic | 20.0% |
| !! | TAACAAGTAGAAAAAAGTAA+AGG | + | chr8_1:52285078-52285097 | None:intergenic | 20.0% |
| !!! | TATTTTTGTTGCTATTTTGA+CGG | - | chr8_1:52285172-52285191 | Msa1199970:CDS | 20.0% |
| !!! | TTTTTGGTTGATGATTATTA+TGG | + | chr8_1:52285524-52285543 | None:intergenic | 20.0% |
| !! | AGTTAATTAATGAATAGGAT+CGG | - | chr8_1:52285622-52285641 | Msa1199970:CDS | 20.0% |
| ! | TTTAGTTGTATAATACTACC+GGG | + | chr8_1:52278278-52278297 | None:intergenic | 25.0% |
| !!! | TTCTTTTTGTTGTGTAACTT+CGG | + | chr8_1:52278640-52278659 | None:intergenic | 25.0% |
| !! | AAAAATTTAAAGTGAAGTGG+AGG | - | chr8_1:52278659-52278678 | Msa1199970:CDS | 25.0% |
| ! | GTTTCTTTCGATAAAGAAAA+CGG | + | chr8_1:52278857-52278876 | None:intergenic | 25.0% |
| ! | ATTCGTAATTGTTTATGGTT+AGG | - | chr8_1:52278928-52278947 | Msa1199970:intron | 25.0% |
| !! | GGAATTTATGGTTTTTCTTT+TGG | + | chr8_1:52278996-52279015 | None:intergenic | 25.0% |
| !! | AACAATTTTCACTAACCAAA+TGG | + | chr8_1:52279064-52279083 | None:intergenic | 25.0% |
| !! | TTGGTTAGTGAAAATTGTTT+TGG | - | chr8_1:52279065-52279084 | Msa1199970:intron | 25.0% |
| !! | TGTTTTTCATCATTATGTGT+TGG | - | chr8_1:52279146-52279165 | Msa1199970:intron | 25.0% |
| ! | ATCTGGCAAAAATATGAATT+TGG | - | chr8_1:52279574-52279593 | Msa1199970:intron | 25.0% |
| !!! | TCAAGTTGGAGATATTAAAA+CGG | - | chr8_1:52279614-52279633 | Msa1199970:intron | 25.0% |
| !!! | AGTTTTTTTCTTCTTTCGAA+TGG | - | chr8_1:52279638-52279657 | Msa1199970:intron | 25.0% |
| ! | AAATGTTGAAATTATTAGGG+CGG | - | chr8_1:52279743-52279762 | Msa1199970:intron | 25.0% |
| ! | TGAAAATCATATATAAGTGG+AGG | + | chr8_1:52279798-52279817 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTGGATAACAAAA+TGG | + | chr8_1:52279832-52279851 | None:intergenic | 25.0% |
| !!! | AAATGAATTTTGGAAGGTTT+TGG | - | chr8_1:52279933-52279952 | Msa1199970:intron | 25.0% |
| !!! | TATGTTTTGATGGAGTATTT+TGG | + | chr8_1:52280287-52280306 | None:intergenic | 25.0% |
| !! | CAATTTTCATTTGTAGAGTA+AGG | + | chr8_1:52280310-52280329 | None:intergenic | 25.0% |
| ! | CTTACTCTACAAATGAAAAT+TGG | - | chr8_1:52280308-52280327 | Msa1199970:intron | 25.0% |
| ! | GAAATATGCAATGTGATAAA+CGG | - | chr8_1:52280629-52280648 | Msa1199970:intron | 25.0% |
| ! | TCATAGTAAAAAACACTCAT+AGG | - | chr8_1:52280808-52280827 | Msa1199970:intron | 25.0% |
| ! | CATAGTAAAAAACACTCATA+GGG | - | chr8_1:52280809-52280828 | Msa1199970:intron | 25.0% |
| ! | ATAGTAAAAAACACTCATAG+GGG | - | chr8_1:52280810-52280829 | Msa1199970:intron | 25.0% |
| ! | TTGAATAATAACTACTCTTC+TGG | - | chr8_1:52280938-52280957 | Msa1199970:intron | 25.0% |
| !!! | TGAAAATGTTTCATTTTGGT+TGG | + | chr8_1:52281088-52281107 | None:intergenic | 25.0% |
| !! | ACGATGAAAATGTTTCATTT+TGG | + | chr8_1:52281092-52281111 | None:intergenic | 25.0% |
| ! | ATTGTTAAAGACAAAGGAAT+TGG | + | chr8_1:52281259-52281278 | None:intergenic | 25.0% |
| ! | TTTAACAATTACCACTAAAG+TGG | - | chr8_1:52281270-52281289 | Msa1199970:CDS | 25.0% |
| ! | TTAACAATTACCACTAAAGT+GGG | - | chr8_1:52281271-52281290 | Msa1199970:CDS | 25.0% |
| ! | TGAGAAACAAAACATATCAT+AGG | + | chr8_1:52281341-52281360 | None:intergenic | 25.0% |
| !!! | AGAAATGAGTTGAAGAATTT+TGG | - | chr8_1:52281578-52281597 | Msa1199970:intron | 25.0% |
| ! | TTTGTTTACTTTGTATTGGA+AGG | + | chr8_1:52281752-52281771 | None:intergenic | 25.0% |
| ! | AAATTGTAAGTGTATACACA+AGG | - | chr8_1:52281838-52281857 | Msa1199970:intron | 25.0% |
| !! | AATAATAATTGTGACCCTTT+TGG | - | chr8_1:52282557-52282576 | Msa1199970:intron | 25.0% |
| !!! | ATCACACAAACTGTTTTAAT+AGG | - | chr8_1:52282618-52282637 | Msa1199970:intron | 25.0% |
| ! | ATTTCTCAACCATTGTATAA+AGG | - | chr8_1:52282827-52282846 | Msa1199970:intron | 25.0% |
| ! | TTTCTCAACCATTGTATAAA+GGG | - | chr8_1:52282828-52282847 | Msa1199970:intron | 25.0% |
| ! | AAAATGATAACTAGTGTCTA+TGG | + | chr8_1:52283228-52283247 | None:intergenic | 25.0% |
| !! | TTTTCAGTGTAGATATAACT+TGG | - | chr8_1:52283317-52283336 | Msa1199970:intron | 25.0% |
| ! | ATAGAGTTCAAATCTATTCA+AGG | + | chr8_1:52283442-52283461 | None:intergenic | 25.0% |
| !! | GTCAAACTTTTACTATTCAA+TGG | - | chr8_1:52283478-52283497 | Msa1199970:intron | 25.0% |
| !! | ATACAACTTGAAATAGCTTT+TGG | + | chr8_1:52283548-52283567 | None:intergenic | 25.0% |
| ! | ATATATGTCTTGGTTAGAAT+AGG | + | chr8_1:52283632-52283651 | None:intergenic | 25.0% |
| !! | AGCCAATAAGCAATTTTTAT+AGG | - | chr8_1:52283845-52283864 | Msa1199970:intron | 25.0% |
| ! | CTCCTATAAAAATTGCTTAT+TGG | + | chr8_1:52283850-52283869 | None:intergenic | 25.0% |
| !! | ACAGATGTAAGTTTTCTTTA+TGG | - | chr8_1:52283951-52283970 | Msa1199970:intron | 25.0% |
| !! | CAGATGTAAGTTTTCTTTAT+GGG | - | chr8_1:52283952-52283971 | Msa1199970:intron | 25.0% |
| !!! | GTCATTTTAATAAACTTCAG+GGG | + | chr8_1:52283994-52284013 | None:intergenic | 25.0% |
| !!! | GTGTCATTTTAATAAACTTC+AGG | + | chr8_1:52283996-52284015 | None:intergenic | 25.0% |
| !!! | GTAAGTTTTAAAAATAGAGG+GGG | + | chr8_1:52284742-52284761 | None:intergenic | 25.0% |
| !! | CAATATTAACAGAGTGTTAA+CGG | + | chr8_1:52284103-52284122 | None:intergenic | 25.0% |
| ! | TTATAATCATTGTTCTCTAG+AGG | - | chr8_1:52284144-52284163 | Msa1199970:intron | 25.0% |
| !! | TTCTTTATTTGATCCTTTAG+AGG | - | chr8_1:52284189-52284208 | Msa1199970:intron | 25.0% |
| ! | TAATGCGATATACACAATTA+AGG | - | chr8_1:52284303-52284322 | Msa1199970:intron | 25.0% |
| ! | TGAGTAAAATTGAAATTTGG+GGG | - | chr8_1:52284365-52284384 | Msa1199970:intron | 25.0% |
| ! | GTAAGAAAAAATTGCAATTC+GGG | - | chr8_1:52284487-52284506 | Msa1199970:CDS | 25.0% |
| ! | ACTTTATAAAAACTTAAGGG+AGG | - | chr8_1:52284714-52284733 | Msa1199970:CDS | 25.0% |
| !!! | GTAAGTTTTAAAAATAGAGG+GGG | - | chr8_1:52284742-52284761 | Msa1199970:CDS | 25.0% |
| !!! | TTGCATCTCTTAATTTTGAT+CGG | + | chr8_1:52284864-52284883 | None:intergenic | 25.0% |
| ! | AAACACATGATATATGATCA+CGG | - | chr8_1:52284896-52284915 | Msa1199970:CDS | 25.0% |
| ! | AAAAGATAATGCACTCAAAA+AGG | + | chr8_1:52284942-52284961 | None:intergenic | 25.0% |
| !!! | TAAAATTGGTTGTGTTACTT+AGG | + | chr8_1:52285150-52285169 | None:intergenic | 25.0% |
| !!! | ATTTTTGTTGCTATTTTGAC+GGG | - | chr8_1:52285173-52285192 | Msa1199970:CDS | 25.0% |
| !! | AAAAAGATGTTTGAGATTCA+TGG | - | chr8_1:52285385-52285404 | Msa1199970:CDS | 25.0% |
| ! | ACTCAAATGAATATTGGAAA+TGG | - | chr8_1:52285445-52285464 | Msa1199970:CDS | 25.0% |
| !!! | GCTTAATTTGCACTAAATTA+TGG | - | chr8_1:52285584-52285603 | Msa1199970:CDS | 25.0% |
| TATTCAAGGATTCGAGATTT+GGG | + | chr8_1:52278466-52278485 | None:intergenic | 30.0% | |
| ATTTATTAGGGTTAGAGGTT+TGG | - | chr8_1:52278764-52278783 | Msa1199970:intron | 30.0% | |
| CTAACCAACTTGAAAACAAA+CGG | + | chr8_1:52278825-52278844 | None:intergenic | 30.0% | |
| ACAGCATTCGTAATTGTTTA+TGG | - | chr8_1:52278923-52278942 | Msa1199970:intron | 30.0% | |
| !!! | GTCTTGTTTTACTCTCATAT+TGG | - | chr8_1:52278950-52278969 | Msa1199970:intron | 30.0% |
| AAACCATAAATTCCTCAACA+AGG | - | chr8_1:52279002-52279021 | Msa1199970:intron | 30.0% | |
| !! | TTTTAATTGGTGCAACCATT+TGG | - | chr8_1:52279046-52279065 | Msa1199970:intron | 30.0% |
| GAAGTTGAAGAAACTTAGTA+TGG | - | chr8_1:52279308-52279327 | Msa1199970:intron | 30.0% | |
| GTTAATTATGTTAGGTCTTC+AGG | - | chr8_1:52279366-52279385 | Msa1199970:intron | 30.0% | |
| !! | TCTAGGACTATTGATGATTT+TGG | - | chr8_1:52279402-52279421 | Msa1199970:intron | 30.0% |
| AGAGTGAAATTAGTAGTGAA+TGG | - | chr8_1:52279433-52279452 | Msa1199970:intron | 30.0% | |
| TACTAAGTTGCTACAAAATC+TGG | - | chr8_1:52279557-52279576 | Msa1199970:intron | 30.0% | |
| ! | CAAGTTGGAGATATTAAAAC+GGG | - | chr8_1:52279615-52279634 | Msa1199970:intron | 30.0% |
| TTTCGAATGGCTGTTAAAAT+TGG | - | chr8_1:52279651-52279670 | Msa1199970:intron | 30.0% | |
| AGAAAAAAACACACTATGTG+TGG | - | chr8_1:52279909-52279928 | Msa1199970:intron | 30.0% | |
| GAAAAAAACACACTATGTGT+GGG | - | chr8_1:52279910-52279929 | Msa1199970:intron | 30.0% | |
| ! | TATGTGTGGGAAATGAATTT+TGG | - | chr8_1:52279923-52279942 | Msa1199970:intron | 30.0% |
| !! | TTTTGATGGAGTATTTTGGA+GGG | + | chr8_1:52280283-52280302 | None:intergenic | 30.0% |
| !! | TAGAGTAAGGTATGTTTTGA+TGG | + | chr8_1:52280297-52280316 | None:intergenic | 30.0% |
| TGATGTTATGCACTATAAAG+GGG | + | chr8_1:52280354-52280373 | None:intergenic | 30.0% | |
| GTGATGTTATGCACTATAAA+GGG | + | chr8_1:52280355-52280374 | None:intergenic | 30.0% | |
| AGTGATGTTATGCACTATAA+AGG | + | chr8_1:52280356-52280375 | None:intergenic | 30.0% | |
| TCACCTTTATATATTGGTGT+AGG | - | chr8_1:52280511-52280530 | Msa1199970:intron | 30.0% | |
| CTTTATATATTGGTGTAGGT+GGG | - | chr8_1:52280515-52280534 | Msa1199970:intron | 30.0% | |
| ATAGTAGTTAAATGCCTCTA+GGG | + | chr8_1:52280600-52280619 | None:intergenic | 30.0% | |
| AATAGTAGTTAAATGCCTCT+AGG | + | chr8_1:52280601-52280620 | None:intergenic | 30.0% | |
| ATCTTCCACTTTAATCATTC+AGG | + | chr8_1:52280695-52280714 | None:intergenic | 30.0% | |
| ! | AGTATGAGTTTGTGACATTT+TGG | + | chr8_1:52280903-52280922 | None:intergenic | 30.0% |
| TGTCACAAACTCATACTTAT+TGG | - | chr8_1:52280906-52280925 | Msa1199970:intron | 30.0% | |
| ! | GTTGGACTTGGTTAAAAAAA+TGG | + | chr8_1:52281070-52281089 | None:intergenic | 30.0% |
| AAAAACTCAACCCAAGTAAT+TGG | + | chr8_1:52281167-52281186 | None:intergenic | 30.0% | |
| TATATATCATGCGATGAGTT+TGG | + | chr8_1:52281209-52281228 | None:intergenic | 30.0% | |
| GTGGTAATTGTTAAAGACAA+AGG | + | chr8_1:52281265-52281284 | None:intergenic | 30.0% | |
| AAAACATATCATAGGAGTGA+TGG | + | chr8_1:52281333-52281352 | None:intergenic | 30.0% | |
| CGTATCCTACAACTAATATT+AGG | - | chr8_1:52281363-52281382 | Msa1199970:CDS | 30.0% | |
| CGACAAATATAGCAACTATT+TGG | + | chr8_1:52281402-52281421 | None:intergenic | 30.0% | |
| AATAGTTGCTATATTTGTCG+TGG | - | chr8_1:52281402-52281421 | Msa1199970:CDS | 30.0% | |
| ATAGTTGCTATATTTGTCGT+GGG | - | chr8_1:52281403-52281422 | Msa1199970:CDS | 30.0% | |
| CAAAATTGTGCCAATTTAGT+GGG | + | chr8_1:52281435-52281454 | None:intergenic | 30.0% | |
| ! | CACTAAATTGGCACAATTTT+GGG | - | chr8_1:52281434-52281453 | Msa1199970:CDS | 30.0% |
| ! | TATTAGTTGGTTCTTGTTCT+TGG | - | chr8_1:52281528-52281547 | Msa1199970:intron | 30.0% |
| !!! | ATTTTTTTGTTAGGGCACAA+AGG | - | chr8_1:52281965-52281984 | Msa1199970:intron | 30.0% |
| !!! | TTTTTTTGTTAGGGCACAAA+GGG | - | chr8_1:52281966-52281985 | Msa1199970:intron | 30.0% |
| !! | ATCTCATGAGATTTTTGAAG+AGG | - | chr8_1:52282159-52282178 | Msa1199970:intron | 30.0% |
| !! | TCTCATGAGATTTTTGAAGA+GGG | - | chr8_1:52282160-52282179 | Msa1199970:intron | 30.0% |
| ! | CAGATCTTCCTTTAGAAATT+GGG | - | chr8_1:52282241-52282260 | Msa1199970:intron | 30.0% |
| !!! | CTCTTTTTAATTTGGCTATG+TGG | - | chr8_1:52282358-52282377 | Msa1199970:intron | 30.0% |
| TTCCATGTAGTCAAAATTCA+TGG | - | chr8_1:52282790-52282809 | Msa1199970:intron | 30.0% | |
| TAACATGACCCTTTATACAA+TGG | + | chr8_1:52282839-52282858 | None:intergenic | 30.0% | |
| ACTAGTATCTAAAAGACAAC+TGG | + | chr8_1:52282863-52282882 | None:intergenic | 30.0% | |
| ! | TGTCTTTTAGATACTAGTTG+AGG | - | chr8_1:52282865-52282884 | Msa1199970:intron | 30.0% |
| !! | TCAACTGTGTCACTTAATAA+GGG | + | chr8_1:52282969-52282988 | None:intergenic | 30.0% |
| TCTTATCTTGATCCAAAGAT+CGG | - | chr8_1:52283265-52283284 | Msa1199970:intron | 30.0% | |
| AGTTCAAATCTATTCAAGGA+TGG | + | chr8_1:52283438-52283457 | None:intergenic | 30.0% | |
| GATTTGAACTCTATTCTATG+AGG | - | chr8_1:52283448-52283467 | Msa1199970:intron | 30.0% | |
| TGAGTAGATATAAACGAATG+TGG | + | chr8_1:52283707-52283726 | None:intergenic | 30.0% | |
| TATAGGAGTTGTAACATCAA+TGG | + | chr8_1:52283902-52283921 | None:intergenic | 30.0% | |
| !! | ATTTTAATAAACTTCAGGGG+AGG | + | chr8_1:52283991-52284010 | None:intergenic | 30.0% |
| CGTTAACACTCTGTTAATAT+TGG | - | chr8_1:52284101-52284120 | Msa1199970:intron | 30.0% | |
| ATTGATGCTCATGCAAAATT+AGG | + | chr8_1:52284225-52284244 | None:intergenic | 30.0% | |
| !! | TTTTTGGTGAACGATGAAAT+TGG | - | chr8_1:52284458-52284477 | Msa1199970:CDS | 30.0% |
| !! | TAATTTTGACCATCTGCATA+TGG | + | chr8_1:52284583-52284602 | None:intergenic | 30.0% |
| !!! | GTTTTTTTTCTTCAGTTCCA+TGG | + | chr8_1:52284642-52284661 | None:intergenic | 30.0% |
| ATTAACAGTGTTAAGAGAGA+AGG | - | chr8_1:52284678-52284697 | Msa1199970:CDS | 30.0% | |
| TTAACAGTGTTAAGAGAGAA+GGG | - | chr8_1:52284679-52284698 | Msa1199970:CDS | 30.0% | |
| !!! | TGTCATTTTAATAGACCTCA+AGG | - | chr8_1:52284771-52284790 | Msa1199970:CDS | 30.0% |
| !! | GTCATTTTAATAGACCTCAA+GGG | - | chr8_1:52284772-52284791 | Msa1199970:CDS | 30.0% |
| TAGAAAGATAATGCAGTCTA+GGG | + | chr8_1:52284984-52285003 | None:intergenic | 30.0% | |
| ATAGAAAGATAATGCAGTCT+AGG | + | chr8_1:52284985-52285004 | None:intergenic | 30.0% | |
| !!! | ACATCTTTTTCAATTCCAAG+AGG | + | chr8_1:52285375-52285394 | None:intergenic | 30.0% |
| CAATATTCATTTGAGTGAGA+TGG | + | chr8_1:52285441-52285460 | None:intergenic | 30.0% | |
| CATCTCACTCAAATGAATAT+TGG | - | chr8_1:52285439-52285458 | Msa1199970:CDS | 30.0% | |
| TAGAAACAAGAGTAGAAGTA+TGG | + | chr8_1:52285651-52285670 | None:intergenic | 30.0% | |
| GAAGAGAATAACTTGAGGTT+CGG | + | chr8_1:52278314-52278333 | None:intergenic | 35.0% | |
| TCAAGGAAGAGAATAACTTG+AGG | + | chr8_1:52278319-52278338 | None:intergenic | 35.0% | |
| TGTCCATAGAAGAAGGTTTA+GGG | + | chr8_1:52278354-52278373 | None:intergenic | 35.0% | |
| !! | TTAAGGGTTTTTGCTCTAGA+GGG | + | chr8_1:52278424-52278443 | None:intergenic | 35.0% |
| GTATTCAAGGATTCGAGATT+TGG | + | chr8_1:52278467-52278486 | None:intergenic | 35.0% | |
| TCAGAAGAGATCTTGTATGT+AGG | + | chr8_1:52278544-52278563 | None:intergenic | 35.0% | |
| GTTTGTTCTGTCACAATAAG+AGG | - | chr8_1:52278727-52278746 | Msa1199970:intron | 35.0% | |
| CATGCATTTATTAGGGTTAG+AGG | - | chr8_1:52278759-52278778 | Msa1199970:intron | 35.0% | |
| ATGGCAATGGTAACATTTAG+TGG | - | chr8_1:52278799-52278818 | Msa1199970:intron | 35.0% | |
| ACACCTTGTTGAGGAATTTA+TGG | + | chr8_1:52279008-52279027 | None:intergenic | 35.0% | |
| !!! | GCACTTGTTGCTGTTTTAAT+TGG | - | chr8_1:52279033-52279052 | Msa1199970:intron | 35.0% |
| TGGAAGAAGATGAAGAGATT+TGG | - | chr8_1:52279264-52279283 | Msa1199970:intron | 35.0% | |
| AAACTTAGTATGGAGAGTAG+TGG | - | chr8_1:52279318-52279337 | Msa1199970:intron | 35.0% | |
| CAGGTTTGTCAACAATTTCT+AGG | - | chr8_1:52279385-52279404 | Msa1199970:intron | 35.0% | |
| ATATATACTTACTTGGCACC+AGG | + | chr8_1:52279504-52279523 | None:intergenic | 35.0% | |
| ! | TGTGGGAAATGAATTTTGGA+AGG | - | chr8_1:52279927-52279946 | Msa1199970:intron | 35.0% |
| !! | TGAATTTTGGAAGGTTTTGG+AGG | - | chr8_1:52279936-52279955 | Msa1199970:intron | 35.0% |
| !! | TTTTGGAGGAAAGACTAAGT+TGG | - | chr8_1:52279950-52279969 | Msa1199970:intron | 35.0% |
| ATTCTTTCCGACGTCAATTT+CGG | + | chr8_1:52280117-52280136 | None:intergenic | 35.0% | |
| !! | TTTGATGGAGTATTTTGGAG+GGG | + | chr8_1:52280282-52280301 | None:intergenic | 35.0% |
| !! | GTTTTGATGGAGTATTTTGG+AGG | + | chr8_1:52280284-52280303 | None:intergenic | 35.0% |
| GATGTTATGCACTATAAAGG+GGG | + | chr8_1:52280353-52280372 | None:intergenic | 35.0% | |
| CCACCTACACCAATATATAA+AGG | + | chr8_1:52280517-52280536 | None:intergenic | 35.0% | |
| CCTTTATATATTGGTGTAGG+TGG | - | chr8_1:52280514-52280533 | Msa1199970:intron | 35.0% | |
| TAGTAGTTAAATGCCTCTAG+GGG | + | chr8_1:52280599-52280618 | None:intergenic | 35.0% | |
| CACTACCTGAATGATTAAAG+TGG | - | chr8_1:52280687-52280706 | Msa1199970:intron | 35.0% | |
| TATCACATTCTTCAATCCAC+TGG | + | chr8_1:52280755-52280774 | None:intergenic | 35.0% | |
| TTCTCAATTGGTCCATATTG+TGG | - | chr8_1:52281010-52281029 | Msa1199970:intron | 35.0% | |
| TCTCAATTGGTCCATATTGT+GGG | - | chr8_1:52281011-52281030 | Msa1199970:intron | 35.0% | |
| AGCACTAAAATCCCACAATA+TGG | + | chr8_1:52281025-52281044 | None:intergenic | 35.0% | |
| !!! | TGTTTCATTTTGGTTGGACT+TGG | + | chr8_1:52281082-52281101 | None:intergenic | 35.0% |
| !! | GGAAAGACCATTTTTGTCTA+TGG | - | chr8_1:52281292-52281311 | Msa1199970:CDS | 35.0% |
| CCTGACCTAATATTAGTTGT+AGG | + | chr8_1:52281371-52281390 | None:intergenic | 35.0% | |
| CCTACAACTAATATTAGGTC+AGG | - | chr8_1:52281368-52281387 | Msa1199970:CDS | 35.0% | |
| CCAAAATTGTGCCAATTTAG+TGG | + | chr8_1:52281436-52281455 | None:intergenic | 35.0% | |
| ! | CCACTAAATTGGCACAATTT+TGG | - | chr8_1:52281433-52281452 | Msa1199970:CDS | 35.0% |
| ! | AATTTTGCTCTGCCGTTAAA+CGG | - | chr8_1:52281471-52281490 | Msa1199970:CDS | 35.0% |
| TAATCATACCCTTCATTGAC+GGG | + | chr8_1:52281500-52281519 | None:intergenic | 35.0% | |
| CTAATCATACCCTTCATTGA+CGG | + | chr8_1:52281501-52281520 | None:intergenic | 35.0% | |
| !! | GATTAGTCTCTCGTATTAGT+TGG | - | chr8_1:52281515-52281534 | Msa1199970:intron | 35.0% |
| ! | CAAAGGAAAAGTTCTGCTTT+TGG | + | chr8_1:52281728-52281747 | None:intergenic | 35.0% |
| ACTTTGTATTGGAAGGTCAA+AGG | + | chr8_1:52281745-52281764 | None:intergenic | 35.0% | |
| !! | AAATGTTATTTGGTGCGAGA+GGG | + | chr8_1:52281802-52281821 | None:intergenic | 35.0% |
| ! | GTATTTGGTACACTCACTTT+TGG | + | chr8_1:52281880-52281899 | None:intergenic | 35.0% |
| ! | AAACATGGTTGGTTGTATCT+TGG | - | chr8_1:52281991-52282010 | Msa1199970:intron | 35.0% |
| ACCATATTTCCACTCTTTGA+AGG | - | chr8_1:52282194-52282213 | Msa1199970:intron | 35.0% | |
| ACCTTCAAAGAGTGGAAATA+TGG | + | chr8_1:52282198-52282217 | None:intergenic | 35.0% | |
| ! | GCAGATCTTCCTTTAGAAAT+TGG | - | chr8_1:52282240-52282259 | Msa1199970:intron | 35.0% |
| ! | ATCTTCCTTTAGAAATTGGG+TGG | - | chr8_1:52282244-52282263 | Msa1199970:intron | 35.0% |
| ACTTACCACCCAATTTCTAA+AGG | + | chr8_1:52282252-52282271 | None:intergenic | 35.0% | |
| ! | TTAATAGGAGTTGCTTTCCA+AGG | - | chr8_1:52282633-52282652 | Msa1199970:intron | 35.0% |
| CATGATGAAGACAAAGATGA+TGG | + | chr8_1:52282682-52282701 | None:intergenic | 35.0% | |
| ! | ATCATGCACCCTTTTGATAT+TGG | - | chr8_1:52282696-52282715 | Msa1199970:intron | 35.0% |
| AACGGTCTCCAATATCAAAA+GGG | + | chr8_1:52282707-52282726 | None:intergenic | 35.0% | |
| AGGTTGTGAAATTACATACC+TGG | + | chr8_1:52282746-52282765 | None:intergenic | 35.0% | |
| AATCCTTGTGCACAAATTAG+AGG | + | chr8_1:52282766-52282785 | None:intergenic | 35.0% | |
| ! | CTAATTTGTGCACAAGGATT+TGG | - | chr8_1:52282766-52282785 | Msa1199970:intron | 35.0% |
| !!! | CACCATGAATTTTGACTACA+TGG | + | chr8_1:52282795-52282814 | None:intergenic | 35.0% |
| !! | GTCAACTGTGTCACTTAATA+AGG | + | chr8_1:52282970-52282989 | None:intergenic | 35.0% |
| TTAAGATCAAAATTGTGCGC+TGG | + | chr8_1:52283006-52283025 | None:intergenic | 35.0% | |
| AACTAGTGTCTATGGAACAT+TGG | + | chr8_1:52283220-52283239 | None:intergenic | 35.0% | |
| TCAATTGCATCACTCATTTC+TGG | + | chr8_1:52283874-52283893 | None:intergenic | 35.0% | |
| AGTGCAATGATAGTCTCTAT+AGG | + | chr8_1:52283919-52283938 | None:intergenic | 35.0% | |
| ! | TTAACGGTGTTAAGAGAGAA+GGG | + | chr8_1:52284087-52284106 | None:intergenic | 35.0% |
| CAACAAGAGGTTTGAATTAG+AGG | + | chr8_1:52284259-52284278 | None:intergenic | 35.0% | |
| !!! | AGAAAGGGTTTTGTTGTAGA+TGG | - | chr8_1:52284421-52284440 | Msa1199970:intron | 35.0% |
| AGAAAAAATTGCAATTCGGG+AGG | - | chr8_1:52284490-52284509 | Msa1199970:CDS | 35.0% | |
| ACATATAGTCCATATGCAGA+TGG | - | chr8_1:52284571-52284590 | Msa1199970:CDS | 35.0% | |
| !! | ATTTTAATAGACCTCAAGGG+AGG | - | chr8_1:52284775-52284794 | Msa1199970:CDS | 35.0% |
| TTGAGAGCAAACCAAAGTAT+TGG | - | chr8_1:52285224-52285243 | Msa1199970:CDS | 35.0% | |
| ! | TGCTTTGGATTCCAATACTT+TGG | + | chr8_1:52285238-52285257 | None:intergenic | 35.0% |
| GGCAAAACAAATAGATCAAG+TGG | - | chr8_1:52285267-52285286 | Msa1199970:CDS | 35.0% | |
| ACCATTAACCACCAGAATTA+TGG | - | chr8_1:52285322-52285341 | Msa1199970:CDS | 35.0% | |
| ACCATAATTCTGGTGGTTAA+TGG | + | chr8_1:52285326-52285345 | None:intergenic | 35.0% | |
| TACTTCTCTCACCATAATTC+TGG | + | chr8_1:52285336-52285355 | None:intergenic | 35.0% | |
| !! | ATTATGGTGAGAGAAGTACT+AGG | - | chr8_1:52285338-52285357 | Msa1199970:CDS | 35.0% |
| ! | AAGGTTTAGGGTTGTGTTGT+TGG | + | chr8_1:52278342-52278361 | None:intergenic | 40.0% |
| CAACCCTAAACCTTCTTCTA+TGG | - | chr8_1:52278348-52278367 | Msa1199970:three_prime_UTR | 40.0% | |
| GTGTCCATAGAAGAAGGTTT+AGG | + | chr8_1:52278355-52278374 | None:intergenic | 40.0% | |
| GTTTCAGTGTCCATAGAAGA+AGG | + | chr8_1:52278361-52278380 | None:intergenic | 40.0% | |
| TGTTTAGGCTTCTCTTGATG+AGG | + | chr8_1:52278400-52278419 | None:intergenic | 40.0% | |
| !! | TTTGCTCTAGAGGGATGTTT+AGG | + | chr8_1:52278415-52278434 | None:intergenic | 40.0% |
| ! | GTTAAGGGTTTTTGCTCTAG+AGG | + | chr8_1:52278425-52278444 | None:intergenic | 40.0% |
| ! | AAGGATTCGAGATTTGGGTT+TGG | + | chr8_1:52278461-52278480 | None:intergenic | 40.0% |
| TTGAGTGTCTTCTTCTTCAG+AGG | + | chr8_1:52278518-52278537 | None:intergenic | 40.0% | |
| ATACCAGGAAGAAGAATCAG+AGG | - | chr8_1:52278588-52278607 | Msa1199970:CDS | 40.0% | |
| !!! | AGTGGAGGCTTGTTTTTGAA+TGG | - | chr8_1:52278674-52278693 | Msa1199970:CDS | 40.0% |
| GGTTTGGAGATGGTGTTTAA+TGG | - | chr8_1:52278780-52278799 | Msa1199970:intron | 40.0% | |
| GAGATGGTGTTTAATGGCAA+TGG | - | chr8_1:52278786-52278805 | Msa1199970:intron | 40.0% | |
| TATGTGTTGGATGCATTGTC+TGG | - | chr8_1:52279159-52279178 | Msa1199970:intron | 40.0% | |
| !! | ATCGAAAGAGCATCCTTTGA+AGG | - | chr8_1:52279209-52279228 | Msa1199970:intron | 40.0% |
| !! | TCGAAAGAGCATCCTTTGAA+GGG | - | chr8_1:52279210-52279229 | Msa1199970:intron | 40.0% |
| ATCGTCTTTGAACCCTTCAA+AGG | + | chr8_1:52279225-52279244 | None:intergenic | 40.0% | |
| ! | AGATGAAGAGATTTGGTTCG+AGG | - | chr8_1:52279271-52279290 | Msa1199970:intron | 40.0% |
| TTCAACAATGTTGCCAAACC+TGG | - | chr8_1:52279483-52279502 | Msa1199970:intron | 40.0% | |
| ATTCTTCAATCCACTGGCAA+TGG | + | chr8_1:52280749-52280768 | None:intergenic | 40.0% | |
| !! | TTGTGACATTTTGGTGTGGA+TGG | + | chr8_1:52280894-52280913 | None:intergenic | 40.0% |
| !! | GAGTTTGTGACATTTTGGTG+TGG | + | chr8_1:52280898-52280917 | None:intergenic | 40.0% |
| !! | TTCTGGTTCATTCTCTTCAC+AGG | - | chr8_1:52280955-52280974 | Msa1199970:intron | 40.0% |
| !! | TTGTGGGATTTTAGTGCTCA+TGG | - | chr8_1:52281027-52281046 | Msa1199970:intron | 40.0% |
| AAGTAATTGGATGGTAGGGT+TGG | + | chr8_1:52281154-52281173 | None:intergenic | 40.0% | |
| AACCCTACCATCCAATTACT+TGG | - | chr8_1:52281153-52281172 | Msa1199970:intron | 40.0% | |
| ACCCTACCATCCAATTACTT+GGG | - | chr8_1:52281154-52281173 | Msa1199970:intron | 40.0% | |
| ACCCAAGTAATTGGATGGTA+GGG | + | chr8_1:52281158-52281177 | None:intergenic | 40.0% | |
| AACCCAAGTAATTGGATGGT+AGG | + | chr8_1:52281159-52281178 | None:intergenic | 40.0% | |
| ACTCAACCCAAGTAATTGGA+TGG | + | chr8_1:52281163-52281182 | None:intergenic | 40.0% | |
| AATGGTCTTTCCCACTTTAG+TGG | + | chr8_1:52281284-52281303 | None:intergenic | 40.0% | |
| GTTGGGACCATAGACAAAAA+TGG | + | chr8_1:52281302-52281321 | None:intergenic | 40.0% | |
| AATCATACCCTTCATTGACG+GGG | + | chr8_1:52281499-52281518 | None:intergenic | 40.0% | |
| !! | AGGAAAAGTTCTGCTTTTGG+TGG | + | chr8_1:52281725-52281744 | None:intergenic | 40.0% |
| !! | GAAATGTTATTTGGTGCGAG+AGG | + | chr8_1:52281803-52281822 | None:intergenic | 40.0% |
| CACAAAGGGAAAAACATGGT+TGG | - | chr8_1:52281980-52281999 | Msa1199970:intron | 40.0% | |
| !! | TTTGAAGGTGCTCTTGAAAC+TGG | - | chr8_1:52282209-52282228 | Msa1199970:intron | 40.0% |
| !! | TTGAAGGTGCTCTTGAAACT+GGG | - | chr8_1:52282210-52282229 | Msa1199970:intron | 40.0% |
| !! | AAGTTGTTGCACTGCTGTTT+TGG | + | chr8_1:52282505-52282524 | None:intergenic | 40.0% |
| ! | AATTGTGACCCTTTTGGTGA+TGG | - | chr8_1:52282563-52282582 | Msa1199970:intron | 40.0% |
| AGCAACTTCCATCACCAAAA+GGG | + | chr8_1:52282574-52282593 | None:intergenic | 40.0% | |
| TAGCAACTTCCATCACCAAA+AGG | + | chr8_1:52282575-52282594 | None:intergenic | 40.0% | |
| CAACGGTCTCCAATATCAAA+AGG | + | chr8_1:52282708-52282727 | None:intergenic | 40.0% | |
| ! | CAACCTCTAATTTGTGCACA+AGG | - | chr8_1:52282760-52282779 | Msa1199970:intron | 40.0% |
| !! | CTGTGTCACTTAATAAGGGA+CGG | + | chr8_1:52282965-52282984 | None:intergenic | 40.0% |
| AGTCATCTATTGTAGGACTG+AGG | - | chr8_1:52283173-52283192 | Msa1199970:intron | 40.0% | |
| GTCATCTATTGTAGGACTGA+GGG | - | chr8_1:52283174-52283193 | Msa1199970:intron | 40.0% | |
| TAGTCACAGATTCCGATCTT+TGG | + | chr8_1:52283280-52283299 | None:intergenic | 40.0% | |
| TAGTGAGCAAGATTGCGTTA+GGG | + | chr8_1:52283825-52283844 | None:intergenic | 40.0% | |
| TTAGTGAGCAAGATTGCGTT+AGG | + | chr8_1:52283826-52283845 | None:intergenic | 40.0% | |
| ! | GTTAACGGTGTTAAGAGAGA+AGG | + | chr8_1:52284088-52284107 | None:intergenic | 40.0% |
| GCTCATGCAAAATTAGGAAG+TGG | + | chr8_1:52284219-52284238 | None:intergenic | 40.0% | |
| !! | GTTGTTCTTCTGAAGCGATA+CGG | - | chr8_1:52284275-52284294 | Msa1199970:intron | 40.0% |
| TTGGGGGAGTTATTAATACG+AGG | - | chr8_1:52284381-52284400 | Msa1199970:intron | 40.0% | |
| TTGCAATTCGGGAGGATAAT+TGG | - | chr8_1:52284498-52284517 | Msa1199970:CDS | 40.0% | |
| ! | AGATAATGCAGTCTAGGGTT+CGG | + | chr8_1:52284979-52284998 | None:intergenic | 40.0% |
| GAATCCAAAGCATAGTGTGA+TGG | - | chr8_1:52285246-52285265 | Msa1199970:CDS | 40.0% | |
| TTTGCCATCACACTATGCTT+TGG | + | chr8_1:52285253-52285272 | None:intergenic | 40.0% | |
| TTCTCTCACCATAATTCTGG+TGG | + | chr8_1:52285333-52285352 | None:intergenic | 40.0% | |
| TAGGATATCAGAACTCCTCT+TGG | - | chr8_1:52285357-52285376 | Msa1199970:CDS | 40.0% | |
| ! | GAGTGAGATGGATTTCTTGA+GGG | + | chr8_1:52285429-52285448 | None:intergenic | 40.0% |
| ! | TGAGTGAGATGGATTTCTTG+AGG | + | chr8_1:52285430-52285449 | None:intergenic | 40.0% |
| ! | TAGGGTTGTGTTGTTGGTCA+AGG | + | chr8_1:52278336-52278355 | None:intergenic | 45.0% |
| AGGCTTCTCTTGATGAGGTT+CGG | + | chr8_1:52278395-52278414 | None:intergenic | 45.0% | |
| GGAGAAGCTTAGACGGTTAA+GGG | + | chr8_1:52278440-52278459 | None:intergenic | 45.0% | |
| TGGAGAAGCTTAGACGGTTA+AGG | + | chr8_1:52278441-52278460 | None:intergenic | 45.0% | |
| TGGGTTTGGAGAAGCTTAGA+CGG | + | chr8_1:52278447-52278466 | None:intergenic | 45.0% | |
| GAGGTGGATGGTTGTATTCA+AGG | + | chr8_1:52278480-52278499 | None:intergenic | 45.0% | |
| GTGTCTTCTTCTTCAGAGGT+AGG | + | chr8_1:52278514-52278533 | None:intergenic | 45.0% | |
| CGATAGCGACTATGAATACC+AGG | - | chr8_1:52278573-52278592 | Msa1199970:CDS | 45.0% | |
| CATCCTCTGATTCTTCTTCC+TGG | + | chr8_1:52278594-52278613 | None:intergenic | 45.0% | |
| GGAAGAAGAATCAGAGGATG+AGG | - | chr8_1:52278594-52278613 | Msa1199970:CDS | 45.0% | |
| TAGGGTTAGAGGTTTGGAGA+TGG | - | chr8_1:52278770-52278789 | Msa1199970:intron | 45.0% | |
| !!! | GTGGCCGTTTGTTTTCAAGT+TGG | - | chr8_1:52278818-52278837 | Msa1199970:intron | 45.0% |
| GTGCTTGAAACACCTTGTTG+AGG | + | chr8_1:52279017-52279036 | None:intergenic | 45.0% | |
| ! | TGAAGAGATTTGGTTCGAGG+AGG | - | chr8_1:52279274-52279293 | Msa1199970:intron | 45.0% |
| TGGTTCGAGGAGGATTGATA+TGG | - | chr8_1:52279284-52279303 | Msa1199970:intron | 45.0% | |
| ! | TGGAGAGTAGTGGTTCTGTT+TGG | - | chr8_1:52279328-52279347 | Msa1199970:intron | 45.0% |
| TACTTACTTGGCACCAGGTT+TGG | + | chr8_1:52279499-52279518 | None:intergenic | 45.0% | |
| TAGTCCACCGAAATTGACGT+CGG | - | chr8_1:52280107-52280126 | Msa1199970:CDS | 45.0% | |
| !! | TTCGCAGTGGATTACAGGTA+GGG | + | chr8_1:52280848-52280867 | None:intergenic | 45.0% |
| !! | ATTCGCAGTGGATTACAGGT+AGG | + | chr8_1:52280849-52280868 | None:intergenic | 45.0% |
| ACCTGTAATCCACTGCGAAT+TGG | - | chr8_1:52280849-52280868 | Msa1199970:intron | 45.0% | |
| CCTGTAATCCACTGCGAATT+GGG | - | chr8_1:52280850-52280869 | Msa1199970:intron | 45.0% | |
| AATTGGGTGAATGGACCACA+AGG | - | chr8_1:52280866-52280885 | Msa1199970:intron | 45.0% | |
| ATGGTAGGGTTGGATTCAGT+CGG | + | chr8_1:52281144-52281163 | None:intergenic | 45.0% | |
| CATGCGATGAGTTTGGTCAT+AGG | + | chr8_1:52281202-52281221 | None:intergenic | 45.0% | |
| ! | ATCATAGGAGTGATGGTGCT+TGG | + | chr8_1:52281326-52281345 | None:intergenic | 45.0% |
| TGGGTTCAAGCCCACTAAAT+TGG | - | chr8_1:52281422-52281441 | Msa1199970:CDS | 45.0% | |
| ATCATACCCTTCATTGACGG+GGG | + | chr8_1:52281498-52281517 | None:intergenic | 45.0% | |
| CATTCGACGAGAAACAACGA+AGG | - | chr8_1:52281650-52281669 | Msa1199970:intron | 45.0% | |
| AGGGCACAAAGGGAAAAACA+TGG | - | chr8_1:52281976-52281995 | Msa1199970:intron | 45.0% | |
| !! | TCAAGAGCACCTTCAAAGAG+TGG | + | chr8_1:52282206-52282225 | None:intergenic | 45.0% |
| ! | AGACAGTTTTGCAAGTGCCT+TGG | + | chr8_1:52282653-52282672 | None:intergenic | 45.0% |
| AGGCACTTGCAAAACTGTCT+TGG | - | chr8_1:52282653-52282672 | Msa1199970:intron | 45.0% | |
| ! | CGGAGGGAGTATGAATATCT+TGG | + | chr8_1:52282945-52282964 | None:intergenic | 45.0% |
| GTCACTTAATAAGGGACGGA+GGG | + | chr8_1:52282961-52282980 | None:intergenic | 45.0% | |
| ! | TGTCACTTAATAAGGGACGG+AGG | + | chr8_1:52282962-52282981 | None:intergenic | 45.0% |
| AGGAAGTGGTATGCCTCTAA+AGG | + | chr8_1:52284205-52284224 | None:intergenic | 45.0% | |
| CGCTTCAGAAGAACAACAAG+AGG | + | chr8_1:52284272-52284291 | None:intergenic | 45.0% | |
| TCTGTCTGATTGTGTGACCA+TGG | - | chr8_1:52284622-52284641 | Msa1199970:CDS | 45.0% | |
| AATTACAGTCACCTCCCTTG+AGG | + | chr8_1:52284789-52284808 | None:intergenic | 45.0% | |
| ! | GATAATGCAGTCTAGGGTTC+GGG | + | chr8_1:52284978-52284997 | None:intergenic | 45.0% |
| GGATTTCTTGAGGGAGAAGA+TGG | + | chr8_1:52285420-52285439 | None:intergenic | 45.0% | |
| !!! | ATATCATATAATATTTTTTT+TGG | - | chr8_1:52280158-52280177 | Msa1199970:CDS | 5.0% |
| !! | ATATTATTTAAGAAAATATA+AGG | + | chr8_1:52282105-52282124 | None:intergenic | 5.0% |
| !!! | AATTATTGATAATTAATTAA+TGG | - | chr8_1:52282411-52282430 | Msa1199970:intron | 5.0% |
| !! | TATTAATTAATTGTAAATTT+AGG | - | chr8_1:52285197-52285216 | Msa1199970:CDS | 5.0% |
| !! | CTTGATGAGGTTCGGTGTTG+TGG | + | chr8_1:52278387-52278406 | None:intergenic | 50.0% |
| !! | GTAGTTTGTTGCGAGGTGGA+TGG | + | chr8_1:52278492-52278511 | None:intergenic | 50.0% |
| !! | GTAGGTAGTTTGTTGCGAGG+TGG | + | chr8_1:52278496-52278515 | None:intergenic | 50.0% |
| !! | GAGGTAGGTAGTTTGTTGCG+AGG | + | chr8_1:52278499-52278518 | None:intergenic | 50.0% |
| !! | ACTTCCTCGCCATTTTCGAC+CGG | + | chr8_1:52279189-52279208 | None:intergenic | 50.0% |
| CTTTCCGACGTCAATTTCGG+TGG | + | chr8_1:52280114-52280133 | None:intergenic | 50.0% | |
| TTACTACCTAGAGCCCCTAG+AGG | - | chr8_1:52280583-52280602 | Msa1199970:intron | 50.0% | |
| ! | TAAATGCCTCTAGGGGCTCT+AGG | + | chr8_1:52280592-52280611 | None:intergenic | 50.0% |
| ATATCCATCGCCATTGCCAG+TGG | - | chr8_1:52280736-52280755 | Msa1199970:intron | 50.0% | |
| !! | CCCAATTCGCAGTGGATTAC+AGG | + | chr8_1:52280853-52280872 | None:intergenic | 50.0% |
| TCCACTGCGAATTGGGTGAA+TGG | - | chr8_1:52280857-52280876 | Msa1199970:intron | 50.0% | |
| TCCATTCACCCAATTCGCAG+TGG | + | chr8_1:52280861-52280880 | None:intergenic | 50.0% | |
| TTGGTGTGGATGGAACCTTG+TGG | + | chr8_1:52280884-52280903 | None:intergenic | 50.0% | |
| GCGATGAGTTTGGTCATAGG+TGG | + | chr8_1:52281199-52281218 | None:intergenic | 50.0% | |
| ! | GAGTGATGGTGCTTGGAGTT+GGG | + | chr8_1:52281319-52281338 | None:intergenic | 50.0% |
| ATTGACGGGGGACCGTTTAA+CGG | + | chr8_1:52281486-52281505 | None:intergenic | 50.0% | |
| !! | TGCTTTTGGTGGCACTCATG+GGG | + | chr8_1:52281714-52281733 | None:intergenic | 50.0% |
| !! | CTGCTTTTGGTGGCACTCAT+GGG | + | chr8_1:52281715-52281734 | None:intergenic | 50.0% |
| !! | TCTGCTTTTGGTGGCACTCA+TGG | + | chr8_1:52281716-52281735 | None:intergenic | 50.0% |
| ! | GGAGACCGTTGTGTCATTGA+CGG | - | chr8_1:52282717-52282736 | Msa1199970:intron | 50.0% |
| GGACACCGTCAATGACACAA+CGG | + | chr8_1:52282725-52282744 | None:intergenic | 50.0% | |
| ! | TTGTGTCATTGACGGTGTCC+AGG | - | chr8_1:52282725-52282744 | Msa1199970:intron | 50.0% |
| ! | GTGCGCTGGTATGTGTGATT+AGG | + | chr8_1:52282992-52283011 | None:intergenic | 50.0% |
| ATCAGAGGATGAGGACGACG+AGG | - | chr8_1:52278603-52278622 | Msa1199970:CDS | 55.0% | |
| TCAGAGGATGAGGACGACGA+GGG | - | chr8_1:52278604-52278623 | Msa1199970:CDS | 55.0% | |
| GGATGCATTGTCTGGTCCAC+CGG | - | chr8_1:52279167-52279186 | Msa1199970:intron | 55.0% | |
| TCTGGTCCACCGGTCGAAAA+TGG | - | chr8_1:52279177-52279196 | Msa1199970:intron | 55.0% | |
| GGGTTCAAAGACGATGCCTC+CGG | - | chr8_1:52279230-52279249 | Msa1199970:intron | 55.0% | |
| GGTTCAAAGACGATGCCTCC+GGG | - | chr8_1:52279231-52279250 | Msa1199970:intron | 55.0% | |
| CAATCCACTGGCAATGGCGA+TGG | + | chr8_1:52280743-52280762 | None:intergenic | 55.0% | |
| ! | GGAGTGATGGTGCTTGGAGT+TGG | + | chr8_1:52281320-52281339 | None:intergenic | 55.0% |
| AAACGGTCCCCCGTCAATGA+AGG | - | chr8_1:52281488-52281507 | Msa1199970:intron | 55.0% | |
| AACGGTCCCCCGTCAATGAA+GGG | - | chr8_1:52281489-52281508 | Msa1199970:intron | 55.0% | |
| !! | TTTTGGTGGCACTCATGGGG+TGG | + | chr8_1:52281711-52281730 | None:intergenic | 55.0% |
| TCCACCGGTCGAAAATGGCG+AGG | - | chr8_1:52279182-52279201 | Msa1199970:intron | 60.0% | |
| !! | TCCTCGCCATTTTCGACCGG+TGG | + | chr8_1:52279186-52279205 | None:intergenic | 60.0% |
| AAAGACGATGCCTCCGGGTG+TGG | - | chr8_1:52279236-52279255 | Msa1199970:intron | 60.0% | |
| AAGACGATGCCTCCGGGTGT+GGG | - | chr8_1:52279237-52279256 | Msa1199970:intron | 60.0% | |
| TTCTTCCACCTCCCCACACC+CGG | + | chr8_1:52279252-52279271 | None:intergenic | 60.0% | |
| AGACGATGCCTCCGGGTGTG+GGG | - | chr8_1:52279238-52279257 | Msa1199970:intron | 65.0% | |
| TTCCACCTCCCCACACCCGG+AGG | + | chr8_1:52279249-52279268 | None:intergenic | 70.0% | |
| CGATGCCTCCGGGTGTGGGG+AGG | - | chr8_1:52279241-52279260 | Msa1199970:intron | 75.0% | |
| TGCCTCCGGGTGTGGGGAGG+TGG | - | chr8_1:52279244-52279263 | Msa1199970:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 52278263 | 52285692 | 52278263 | ID=Msa1199970;Name=Msa1199970 |
| chr8_1 | mRNA | 52278263 | 52285692 | 52278263 | ID=Msa1199970-mRNA-1;Parent=Msa1199970;Name=Msa1199970-mRNA-1;_AED=0.01;_eAED=0.01;_QI=35|1|1|1|1|1|5|203|701 |
| chr8_1 | exon | 52278263 | 52278736 | 52278263 | ID=Msa1199970-mRNA-1:exon:16661;Parent=Msa1199970-mRNA-1 |
| chr8_1 | exon | 52279999 | 52280201 | 52279999 | ID=Msa1199970-mRNA-1:exon:16660;Parent=Msa1199970-mRNA-1 |
| chr8_1 | exon | 52281209 | 52281502 | 52281209 | ID=Msa1199970-mRNA-1:exon:16659;Parent=Msa1199970-mRNA-1 |
| chr8_1 | exon | 52281690 | 52281813 | 52281690 | ID=Msa1199970-mRNA-1:exon:16658;Parent=Msa1199970-mRNA-1 |
| chr8_1 | exon | 52284444 | 52285692 | 52284444 | ID=Msa1199970-mRNA-1:exon:16657;Parent=Msa1199970-mRNA-1 |
| chr8_1 | five_prime_UTR | 52285658 | 52285692 | 52285658 | ID=Msa1199970-mRNA-1:five_prime_utr;Parent=Msa1199970-mRNA-1 |
| chr8_1 | CDS | 52284444 | 52285657 | 52284444 | ID=Msa1199970-mRNA-1:cds;Parent=Msa1199970-mRNA-1 |
| chr8_1 | CDS | 52281690 | 52281813 | 52281690 | ID=Msa1199970-mRNA-1:cds;Parent=Msa1199970-mRNA-1 |
| chr8_1 | CDS | 52281209 | 52281502 | 52281209 | ID=Msa1199970-mRNA-1:cds;Parent=Msa1199970-mRNA-1 |
| chr8_1 | CDS | 52279999 | 52280201 | 52279999 | ID=Msa1199970-mRNA-1:cds;Parent=Msa1199970-mRNA-1 |
| chr8_1 | CDS | 52278466 | 52278736 | 52278466 | ID=Msa1199970-mRNA-1:cds;Parent=Msa1199970-mRNA-1 |
| chr8_1 | three_prime_UTR | 52278263 | 52278465 | 52278263 | ID=Msa1199970-mRNA-1:three_prime_utr;Parent=Msa1199970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
