AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1200550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1200550 MtrunA17_Chr8g0370041 96.781 963 31 0 1 963 235 1197 0.0 1935
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1200550 AT5G65950.1 58.108 962 377 7 1 953 245 1189 0.0 1135

Find 304 sgRNAs with CRISPR-Local

Find 774 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGACAATGTGTTCAGATTT+TGG 0.140646 8_1:-53244672 None:intergenic
CTTATTGAAGAGATTGATTT+TGG 0.155783 8_1:-53235279 None:intergenic
AACTTTATTGTGGGAGGTCC+TGG 0.166045 8_1:+53241781 Msa1200550:CDS
ACCAGGGAGGTTAGGGTTAT+TGG 0.186897 8_1:-53235170 None:intergenic
AGTAGACAATATTTGGTATT+TGG 0.199569 8_1:+53237691 Msa1200550:CDS
TGGTTCGAGGGCAGTGATTC+TGG 0.208307 8_1:-53244141 None:intergenic
CTTCAATTTGCAAGTTCTTA+TGG 0.211916 8_1:-53243993 None:intergenic
CATCATGCTTTACGTATCTT+TGG 0.249164 8_1:+53243924 Msa1200550:CDS
ATACTGTTTCTGAAGGAAAA+AGG 0.253117 8_1:+53241567 Msa1200550:CDS
CTACCACAACATTGTCTTCT+TGG 0.260633 8_1:+53244433 Msa1200550:CDS
GGTGGTGTTCGTAATTCTTC+TGG 0.260949 8_1:-53235149 None:intergenic
TAATAGATAGGTTGAGATTA+AGG 0.261197 8_1:-53235213 None:intergenic
CAAAATATTCTTTGGCCATC+TGG 0.267302 8_1:-53241685 None:intergenic
TGAAACTCTGAATCATCATT+AGG 0.274822 8_1:-53236072 None:intergenic
TTCCTTCAGAAACAGTATAA+TGG 0.274990 8_1:-53241562 None:intergenic
ACCTTCAGCAAAATATTCTT+TGG 0.275878 8_1:-53241693 None:intergenic
ACACCGGTATCGGATGATAT+TGG 0.282939 8_1:-53241881 None:intergenic
CTGTCTGTTATTGCGAAAAT+TGG 0.287365 8_1:+53243388 Msa1200550:CDS
CTTCCACTTGAGTAGACTTC+TGG 0.290457 8_1:-53243534 None:intergenic
TGAGAATCGTCTTCCCCTTC+TGG 0.298216 8_1:-53243781 None:intergenic
AGTTTCAATTGTCTCTTAAC+AGG 0.305805 8_1:+53236088 Msa1200550:five_prime_UTR
CCATTACACTACAGATTGTT+GGG 0.312517 8_1:+53237470 Msa1200550:intron
AAACTCATACTGATTGTAAT+AGG 0.313712 8_1:+53245427 Msa1200550:three_prime_UTR
CTATCCTGCTTATTACTATC+AGG 0.317346 8_1:+53237804 Msa1200550:CDS
TACCACAACATTGTCTTCTT+GGG 0.321215 8_1:+53244434 Msa1200550:CDS
CTTACCAGATTGGATATTAT+AGG 0.323242 8_1:-53242347 None:intergenic
GTGGATGAGTAGACAATATT+TGG 0.324325 8_1:+53237684 Msa1200550:CDS
TCCTTCAGAAACAGTATAAT+GGG 0.324949 8_1:-53241561 None:intergenic
TGTATCCCGGCCCATGAGTA+TGG 0.327126 8_1:-53244946 None:intergenic
CAGGCTTGATTGTCTGTTCA+TGG 0.330224 8_1:-53242111 None:intergenic
CAACCTCCCTTCATCGTTAA+CGG 0.337855 8_1:+53235338 Msa1200550:five_prime_UTR
GAAACTCTGAATCATCATTA+GGG 0.340790 8_1:-53236071 None:intergenic
GAAGTATTTCCGATTGAATC+AGG 0.342296 8_1:-53235314 None:intergenic
ACCGCCATTGATTGTGAGTA+TGG 0.344790 8_1:+53244497 Msa1200550:CDS
TGATGGCTGTCCATAGAATA+TGG 0.354222 8_1:-53243733 None:intergenic
TTTGAGATGGAGGAGGGACT+TGG 0.361890 8_1:+53244389 Msa1200550:CDS
GTTGATTGTTTGTTTGAGAT+TGG 0.363148 8_1:-53235113 None:intergenic
CCTTTGGAGACCAATGTTAC+AGG 0.363183 8_1:-53243628 None:intergenic
ATCATGCTTTACGTATCTTT+GGG 0.365865 8_1:+53243925 Msa1200550:CDS
TCTCTTTGCCGTAGATTTGC+CGG 0.369191 8_1:-53241929 None:intergenic
AAGAAAATACAACAGTCATT+TGG 0.379202 8_1:+53243823 Msa1200550:CDS
CACCGGTATCGGATGATATT+GGG 0.381712 8_1:-53241880 None:intergenic
ACGTAAAGCATGATGGGTTT+AGG 0.383088 8_1:-53243916 None:intergenic
AGACTCCGAGCCATATTCTA+TGG 0.385035 8_1:+53243723 Msa1200550:CDS
AAACCCGCACTTCTTGTTCC+AGG 0.398953 8_1:+53244294 Msa1200550:CDS
TACAAGAAGATCGGTTGAAC+TGG 0.399909 8_1:-53242207 None:intergenic
TGTTTGTTTGAGATTGGATC+TGG 0.400576 8_1:-53235107 None:intergenic
GATGAAGAGCCTAAAATAAC+AGG 0.401349 8_1:-53237757 None:intergenic
ACAAGTGTTGAAGAAGCTTC+TGG 0.401569 8_1:+53235049 Msa1200550:five_prime_UTR
GACAACCTACCAGGGAGGTT+AGG 0.402009 8_1:-53235178 None:intergenic
GCATTTGATTCACCACCATT+TGG 0.402534 8_1:-53243955 None:intergenic
CAGCTGGACCAGTGTCTCTC+TGG 0.402559 8_1:-53241904 None:intergenic
AGCACCGCTGTCAACCTCAT+TGG 0.408677 8_1:-53241353 None:intergenic
CACAGATCTACCTGTGGATC+TGG 0.408919 8_1:-53243559 None:intergenic
TTTCCTGGTACCTGTAACAT+TGG 0.409138 8_1:+53243618 Msa1200550:CDS
AGACACTGGTCCAGCTGGTC+CGG 0.414964 8_1:+53241910 Msa1200550:CDS
GCAGATGTCATTGAAAATCT+AGG 0.419390 8_1:-53244735 None:intergenic
TTTGGTATTTGGTGAATTGT+TGG 0.419839 8_1:+53237702 Msa1200550:CDS
CAGTGTGATACCCGATCTGC+AGG 0.421701 8_1:+53245188 Msa1200550:three_prime_UTR
GATCTGTGTCTTGGTGCCTC+AGG 0.422950 8_1:+53243574 Msa1200550:CDS
TACAGCAACCTAGCAATTCA+TGG 0.425095 8_1:-53236970 None:intergenic
ACGGTATCTTGAAACGTGAT+TGG 0.425528 8_1:+53235357 Msa1200550:five_prime_UTR
CTTGTTCACACCAATGCAAA+TGG 0.425550 8_1:+53235626 Msa1200550:five_prime_UTR
CAGCCATCATGTTCAGCTGC+TGG 0.436257 8_1:+53243747 Msa1200550:CDS
TGCCTCAGGTCCTGCGCTAG+TGG 0.441662 8_1:+53243588 Msa1200550:CDS
GGAGTAGACATCATGGCCTT+TGG 0.441984 8_1:-53243644 None:intergenic
GAAAGGGACTTCAACCTTAG+TGG 0.443485 8_1:-53244207 None:intergenic
CAGATGCAATATTTGTTCAC+TGG 0.443501 8_1:+53237659 Msa1200550:CDS
CAGTGAACAAATATTGCATC+TGG 0.444411 8_1:-53237658 None:intergenic
TATCTCAACCCCTGCAGATC+GGG 0.444503 8_1:-53245198 None:intergenic
AGGGATGGGTAACTTTATTG+TGG 0.444541 8_1:+53241771 Msa1200550:CDS
TTTCCGATTGAATCAGGATC+TGG 0.446284 8_1:-53235308 None:intergenic
CACCTCTCGCAGTGTATGAT+AGG 0.446537 8_1:-53237045 None:intergenic
CAAGATACCGTTAACGATGA+AGG 0.446654 8_1:-53235345 None:intergenic
AATAGATAGGTTGAGATTAA+GGG 0.453417 8_1:-53235212 None:intergenic
CATAAGAACTTGCAAATTGA+AGG 0.455258 8_1:+53243994 Msa1200550:CDS
GGATCTCCCAAGATTGCATA+AGG 0.456212 8_1:-53244528 None:intergenic
ACTTGTTCTCTATAGTCATC+GGG 0.456413 8_1:-53235032 None:intergenic
AACGACTGCGGGAGGAGCCT+AGG 0.456438 8_1:+53245159 Msa1200550:three_prime_UTR
CTAAACCAGCGTACATTTGT+CGG 0.457111 8_1:-53245252 None:intergenic
TTGAGATGGAGGAGGGACTT+GGG 0.457688 8_1:+53244390 Msa1200550:CDS
TCCATTACACTACAGATTGT+TGG 0.458456 8_1:+53237469 Msa1200550:intron
ATTGATCGATCTCAACAGTA+AGG 0.458787 8_1:-53242177 None:intergenic
TTTCTTGCAGCAATTGTGTC+TGG 0.459667 8_1:-53244578 None:intergenic
TCAAAGCACTTCATCATCTT+CGG 0.460028 8_1:-53245105 None:intergenic
GCACCGCTGTCAACCTCATT+GGG 0.461143 8_1:-53241352 None:intergenic
TTGGGAGTGCAGCCATTTCA+AGG 0.464207 8_1:-53241862 None:intergenic
ACTTTATTGTGGGAGGTCCT+GGG 0.465977 8_1:+53241782 Msa1200550:CDS
TGGTTGTTGTGATAATAGAT+AGG 0.466628 8_1:-53235225 None:intergenic
ACGCTTAGTTGAGATAAAAT+CGG 0.466933 8_1:+53237519 Msa1200550:CDS
TTGACCTATAATATCCAATC+TGG 0.468393 8_1:+53242343 Msa1200550:CDS
TGTGGAGTATTCCCTTGAAA+TGG 0.469085 8_1:+53241850 Msa1200550:CDS
AAACTTGTCCCACTTGCCTC+AGG 0.469881 8_1:+53244699 Msa1200550:CDS
CACTGGATAGCTTACCTCTC+TGG 0.471224 8_1:+53243452 Msa1200550:CDS
GGTGTCTATTATAGAGAAGA+AGG 0.473408 8_1:+53236220 Msa1200550:five_prime_UTR
CAATATTTGTTCACTGGGAG+TGG 0.474073 8_1:+53237665 Msa1200550:CDS
CGTAGATTTGCCGGACCAGC+TGG 0.475204 8_1:-53241920 None:intergenic
GAAGATCGGGACAACCTACC+AGG 0.476949 8_1:-53235187 None:intergenic
CTCCTCCCGCAGTCGTTGAA+AGG 0.478205 8_1:-53245153 None:intergenic
TCTTTGGGTTATACTCCAAA+TGG 0.480067 8_1:+53243940 Msa1200550:CDS
TGCTCGGTTACTTGAGGAAG+GGG 0.481267 8_1:+53241411 Msa1200550:CDS
TCCCCTGGAACAAGAAGTGC+GGG 0.482605 8_1:-53244297 None:intergenic
CAAAGATACGTAAAGCATGA+TGG 0.483642 8_1:-53243923 None:intergenic
AAATGAGGGGCAAGAATAAA+CGG 0.484338 8_1:-53244910 None:intergenic
TCAACATTGTTACTGCATAG+TGG 0.484467 8_1:+53237568 Msa1200550:CDS
GAGATTAAGGGATGAAGATC+GGG 0.485049 8_1:-53235200 None:intergenic
CACTTGTTCTCTATAGTCAT+CGG 0.485241 8_1:-53235033 None:intergenic
AAACCAGATCCTGATTCAAT+CGG 0.485306 8_1:+53235305 Msa1200550:five_prime_UTR
GTCTCTCTGGACACCGGTAT+CGG 0.485766 8_1:-53241891 None:intergenic
ACAACCTACCAGGGAGGTTA+GGG 0.487349 8_1:-53235177 None:intergenic
AAGATAGAATGATTGCATTA+CGG 0.488541 8_1:+53236007 Msa1200550:five_prime_UTR
CAGCTGGTCCGGCAAATCTA+CGG 0.489284 8_1:+53241921 Msa1200550:CDS
TGTTCTTAGTGAGTAACAAT+GGG 0.490574 8_1:-53244068 None:intergenic
ACATGGAAAAGCGGATTACA+TGG 0.491830 8_1:+53244978 Msa1200550:three_prime_UTR
GCAAGAAATCAAATACTCAT+TGG 0.492297 8_1:+53244593 Msa1200550:CDS
TAATCACTTCACCATACTCA+TGG 0.493135 8_1:+53244935 Msa1200550:three_prime_UTR
ACCAATAACCCTAACCTCCC+TGG 0.496197 8_1:+53235169 Msa1200550:five_prime_UTR
GAATATGGCTCGGAGTCTCT+TGG 0.497890 8_1:-53243718 None:intergenic
AGCTGAAAGTCCTACTTCAC+TGG 0.499300 8_1:+53243435 Msa1200550:CDS
GGTAAGCTATCCAGTGAAGT+AGG 0.499335 8_1:-53243445 None:intergenic
TTGATCTTGTCAGTCCGCTC+AGG 0.499423 8_1:+53242062 Msa1200550:CDS
TTATAGAGAAGAAGGAAGGA+GGG 0.499639 8_1:+53236228 Msa1200550:five_prime_UTR
TCTATTATAGAGAAGAAGGA+AGG 0.500231 8_1:+53236224 Msa1200550:five_prime_UTR
TCAACTAAGCGTTGTACAGC+TGG 0.500976 8_1:-53237508 None:intergenic
ACTTCATCATCTTCGGCGAC+TGG 0.501518 8_1:-53245098 None:intergenic
CGTATGTCGGTCAGTTTGCT+CGG 0.501702 8_1:+53241395 Msa1200550:CDS
GGTGAAGTGATTACAAAATG+AGG 0.502978 8_1:-53244925 None:intergenic
AACAATGGGTCTCGTCTGAA+TGG 0.503298 8_1:-53244054 None:intergenic
GGCCATCTGGAACCCACAAA+AGG 0.503422 8_1:-53241672 None:intergenic
GTCCCTTTCTGTAGAGGAAG+AGG 0.503593 8_1:+53244221 Msa1200550:CDS
AGGTCCTGCGCTAGTGGGAG+AGG 0.504497 8_1:+53243594 Msa1200550:CDS
GTGAAGTGATTACAAAATGA+GGG 0.507887 8_1:-53244924 None:intergenic
AATATACAAACCATTTGCAT+TGG 0.509173 8_1:-53235636 None:intergenic
TCTAGATGCCATGAATTGCT+AGG 0.510297 8_1:+53236962 Msa1200550:intron
AGGAAGAGGATGGTGTTGAA+AGG 0.512787 8_1:+53244235 Msa1200550:CDS
ACTTTCTTGAACTCTTCCCC+TGG 0.512921 8_1:-53244312 None:intergenic
GGTAACTCCACATTCTTATC+CGG 0.513134 8_1:-53244477 None:intergenic
CAACATTGTTACTGCATAGT+GGG 0.513343 8_1:+53237569 Msa1200550:CDS
CATGCAGATTAGAAATTAAG+TGG 0.514720 8_1:+53243887 Msa1200550:CDS
GTTATCAAAGTTGAGGCTCC+AGG 0.514877 8_1:-53242130 None:intergenic
ATCCTCTTCCTCTACAGAAA+GGG 0.516524 8_1:-53244223 None:intergenic
GGGATGGGTAACTTTATTGT+GGG 0.518090 8_1:+53241772 Msa1200550:CDS
GATCTCCCAAGATTGCATAA+GGG 0.518972 8_1:-53244527 None:intergenic
TGAGATTAAGGGATGAAGAT+CGG 0.520569 8_1:-53235201 None:intergenic
TGTACGCTGGTTTAGTGCAA+TGG 0.520575 8_1:+53245260 Msa1200550:three_prime_UTR
ATGAAGTGCTTTGAGACAGT+TGG 0.520844 8_1:+53245114 Msa1200550:three_prime_UTR
ATTATAGAGAAGAAGGAAGG+AGG 0.520863 8_1:+53236227 Msa1200550:five_prime_UTR
AGATGCAATATTTGTTCACT+GGG 0.521210 8_1:+53237660 Msa1200550:CDS
TTGTTCTTAGTGAGTAACAA+TGG 0.521272 8_1:-53244069 None:intergenic
CAGAGAGACACTGGTCCAGC+TGG 0.521456 8_1:+53241905 Msa1200550:CDS
ATGCAGAATTTCGAAGTGAC+TGG 0.521509 8_1:+53236994 Msa1200550:five_prime_UTR
CACTAAGAACAAGCAAGCCT+CGG 0.521787 8_1:+53244080 Msa1200550:CDS
TCCTCCCGCAGTCGTTGAAA+GGG 0.522067 8_1:-53245152 None:intergenic
AACCCGCACTTCTTGTTCCA+GGG 0.522923 8_1:+53244295 Msa1200550:CDS
AGGGAGGTTAGGGTTATTGG+TGG 0.524310 8_1:-53235167 None:intergenic
ACTTCACCATACTCATGGGC+CGG 0.524886 8_1:+53244940 Msa1200550:three_prime_UTR
TTCTATCTAATAAATGGCTA+CGG 0.524947 8_1:+53242320 Msa1200550:CDS
GTTGTTCCTTCTGCGTATGT+CGG 0.526426 8_1:+53241382 Msa1200550:CDS
TGAAGAAATTACAAGAAGAT+CGG 0.529628 8_1:-53242216 None:intergenic
CATTCCATACTCACAATCAA+TGG 0.529834 8_1:-53244501 None:intergenic
GCAGAAATGTTGTTCGTGCA+AGG 0.530039 8_1:+53235582 Msa1200550:intron
CTTACCTCTCTGGACATTGG+AGG 0.530046 8_1:+53243462 Msa1200550:CDS
CTTGTTCTGTTCAGAGTCCG+AGG 0.532233 8_1:-53244097 None:intergenic
GTCTATACAGAAAAGAGGGA+TGG 0.533994 8_1:+53241756 Msa1200550:CDS
CTAACCTGATAGTAATAAGC+AGG 0.536665 8_1:-53237808 None:intergenic
GAGCTTTGAAATGTTCACAT+TGG 0.539341 8_1:-53244349 None:intergenic
AAACCTCATTTCAAAACCGC+AGG 0.539485 8_1:+53244819 Msa1200550:CDS
TAGCTTACCTCTCTGGACAT+TGG 0.540174 8_1:+53243459 Msa1200550:CDS
CTCCCAATATCATCCGATAC+CGG 0.540532 8_1:+53241878 Msa1200550:CDS
TCTTCTCAATTCAAAGTGCA+AGG 0.540650 8_1:-53245292 None:intergenic
CTCAAGCTGAACTGATTCAT+CGG 0.541099 8_1:-53242038 None:intergenic
AGCCATCATGTTCAGCTGCT+GGG 0.543127 8_1:+53243748 Msa1200550:CDS
TTTGCTCGGTTACTTGAGGA+AGG 0.543615 8_1:+53241409 Msa1200550:CDS
CATCCTCTTCCTCTACAGAA+AGG 0.544919 8_1:-53244224 None:intergenic
AAGATACCGTTAACGATGAA+GGG 0.548797 8_1:-53235344 None:intergenic
CTGGGTATATCTGGACCAGA+AGG 0.549438 8_1:+53243766 Msa1200550:CDS
GGAAGTGCTAATGTGTTGAT+TGG 0.550002 8_1:-53235248 None:intergenic
GTTGAAGTCCCTTTCTGTAG+AGG 0.550119 8_1:+53244215 Msa1200550:CDS
AAGATTGATCTTCAATTCAC+CGG 0.550304 8_1:-53243665 None:intergenic
CTCAACAGTAAGGGGTAGGT+GGG 0.550926 8_1:-53242167 None:intergenic
GTACGCTGGTTTAGTGCAAT+GGG 0.551535 8_1:+53245261 Msa1200550:three_prime_UTR
GTCTGAATGGCATCAAGTAA+TGG 0.551634 8_1:-53244041 None:intergenic
AGTGCTAATGTGTTGATTGG+TGG 0.551718 8_1:-53235245 None:intergenic
TGCTAGTCTATACAGAAAAG+AGG 0.552147 8_1:+53241751 Msa1200550:CDS
CTTGTGGATGTGAAGGGAGG+TGG 0.552474 8_1:+53243685 Msa1200550:CDS
AAAAGCGAAGCAACAACGGA+AGG 0.554859 8_1:-53235404 None:intergenic
ATCTCCCAAGATTGCATAAG+GGG 0.556440 8_1:-53244526 None:intergenic
CTTCACCATACTCATGGGCC+GGG 0.557500 8_1:+53244941 Msa1200550:three_prime_UTR
AAGGAAGGAGGGTTAAACAG+AGG 0.559643 8_1:+53236239 Msa1200550:five_prime_UTR
TCCCACTAGCGCAGGACCTG+AGG 0.559993 8_1:-53243590 None:intergenic
CATGAACAGACAATCAAGCC+TGG 0.560174 8_1:+53242112 Msa1200550:CDS
TTTGCAAGTTCTTATGGACA+TGG 0.560843 8_1:-53243987 None:intergenic
TCTCAACAGTAAGGGGTAGG+TGG 0.561598 8_1:-53242168 None:intergenic
GAGTGAAAAGAGGTCAGCAC+TGG 0.561932 8_1:+53241303 Msa1200550:CDS
GAAGAATTGTGAGCGAGTCT+CGG 0.562420 8_1:+53245310 Msa1200550:three_prime_UTR
ACCCATTATACTGTTTCTGA+AGG 0.563433 8_1:+53241560 Msa1200550:CDS
CGATGAATCAGTTCAGCTTG+AGG 0.563995 8_1:+53242039 Msa1200550:CDS
TGCTATGTCACTAGACATAG+AGG 0.564191 8_1:+53245070 Msa1200550:three_prime_UTR
CTCACTACATGAGTGAAAAG+AGG 0.565143 8_1:+53241293 Msa1200550:CDS
ATATCTCAACCCCTGCAGAT+CGG 0.565559 8_1:-53245199 None:intergenic
CTCCTCCACCCTAAAACTTG+TGG 0.566016 8_1:-53244844 None:intergenic
GCTAGTCTATACAGAAAAGA+GGG 0.566904 8_1:+53241752 Msa1200550:CDS
TCTACCCTTTCAACGACTGC+GGG 0.568399 8_1:+53245148 Msa1200550:three_prime_UTR
TCTATACAGAAAAGAGGGAT+GGG 0.573558 8_1:+53241757 Msa1200550:CDS
GGGTATCTGACTTACCAGAT+TGG 0.575453 8_1:-53242357 None:intergenic
GTATCACACTGAGCAACCCT+AGG 0.578380 8_1:-53245176 None:intergenic
TTGATCGATCTCAACAGTAA+GGG 0.580656 8_1:-53242176 None:intergenic
AGTGGAAGAACCAGATCCAC+AGG 0.580824 8_1:+53243549 Msa1200550:CDS
CGATCTCAACAGTAAGGGGT+AGG 0.581249 8_1:-53242171 None:intergenic
GGGTATATCTGGACCAGAAG+GGG 0.581782 8_1:+53243768 Msa1200550:CDS
TGGGAGTGCAGCCATTTCAA+GGG 0.582745 8_1:-53241861 None:intergenic
CCACAGGTAGATCTGTGTCT+TGG 0.582831 8_1:+53243565 Msa1200550:CDS
AAAGATACGTAAAGCATGAT+GGG 0.584041 8_1:-53243922 None:intergenic
AAAACCTCTCCCACTAGCGC+AGG 0.585233 8_1:-53243598 None:intergenic
TGGGTATATCTGGACCAGAA+GGG 0.586328 8_1:+53243767 Msa1200550:CDS
ACCGGTGTCCAGAGAGACAC+TGG 0.586842 8_1:+53241896 Msa1200550:CDS
CTAATCTAAATCACTAAGTG+AGG 0.586876 8_1:-53245478 None:intergenic
AATTCTGATACAGTATGTGA+AGG 0.587284 8_1:-53244550 None:intergenic
TAGTATTCCCACTCTGACAG+TGG 0.587813 8_1:-53237784 None:intergenic
TTGCTCGGTTACTTGAGGAA+GGG 0.587821 8_1:+53241410 Msa1200550:CDS
TATATGTATTCTTGTGCTGG+CGG 0.588406 8_1:-53237618 None:intergenic
TGGCCAGAAGTCTACTCAAG+TGG 0.589761 8_1:+53243531 Msa1200550:CDS
ATCTAAACCACTGTCAGAGT+GGG 0.590792 8_1:+53237777 Msa1200550:CDS
GATCAATCTTGTGGATGTGA+AGG 0.594317 8_1:+53243678 Msa1200550:CDS
AGACCAATGTTACAGGTACC+AGG 0.594434 8_1:-53243621 None:intergenic
CCTAAAACTTGTGGAGCCTG+CGG 0.595396 8_1:-53244835 None:intergenic
CAAACTTGAAGCCACTGAGA+AGG 0.596257 8_1:-53235452 None:intergenic
ATTCTGATACAGTATGTGAA+GGG 0.596516 8_1:-53244549 None:intergenic
CATTACACTACAGATTGTTG+GGG 0.599335 8_1:+53237471 Msa1200550:intron
ATCAATCTTGTGGATGTGAA+GGG 0.599619 8_1:+53243679 Msa1200550:CDS
ACTGAGTTTGAAGAGTTCGA+AGG 0.599781 8_1:-53244780 None:intergenic
TGAATTGAAGATCAATCTTG+TGG 0.600199 8_1:+53243669 Msa1200550:CDS
ATAAGAACTTGCAAATTGAA+GGG 0.601913 8_1:+53243995 Msa1200550:CDS
CCTGTAACATTGGTCTCCAA+AGG 0.601936 8_1:+53243628 Msa1200550:CDS
ATTGTTACTGCATAGTGGGA+AGG 0.602069 8_1:+53237573 Msa1200550:CDS
CATCTAAACCACTGTCAGAG+TGG 0.602950 8_1:+53237776 Msa1200550:CDS
ACCCGCACTTCTTGTTCCAG+GGG 0.604720 8_1:+53244296 Msa1200550:CDS
CTCAAACAAACAATCAACAA+TGG 0.604843 8_1:+53235118 Msa1200550:five_prime_UTR
CAACGGAAGGAATCTTAGTA+CGG 0.608826 8_1:-53235391 None:intergenic
TACCCAGCAGCTGAACATGA+TGG 0.613604 8_1:-53243750 None:intergenic
TCTTGTCAGTCCGCTCAGGT+TGG 0.614200 8_1:+53242066 Msa1200550:CDS
TGATCGATCTCAACAGTAAG+GGG 0.616226 8_1:-53242175 None:intergenic
AGATTGTTGGGGTGACAACA+AGG 0.617148 8_1:+53237482 Msa1200550:intron
CTGTGTGTTTGAGATGGAGG+AGG 0.618415 8_1:+53244382 Msa1200550:CDS
TTCCCCTGGAACAAGAAGTG+CGG 0.619220 8_1:-53244298 None:intergenic
TTCTGGTTGATCAGACTCTG+AGG 0.619468 8_1:-53244124 None:intergenic
AACATTTCAAAGCTCAGACT+AGG 0.620095 8_1:+53244357 Msa1200550:CDS
TTGGGTTATACTCCAAATGG+TGG 0.620170 8_1:+53243943 Msa1200550:CDS
TCAGTTTGCTCGGTTACTTG+AGG 0.620207 8_1:+53241405 Msa1200550:CDS
AGCACTCTCGCAGGTAACCC+AGG 0.620477 8_1:-53241799 None:intergenic
ATGGGTAACTTTATTGTGGG+AGG 0.620962 8_1:+53241775 Msa1200550:CDS
ACAGTGCTATTAAAATTCAG+AGG 0.622845 8_1:+53241642 Msa1200550:CDS
AAAGGCCATGATGTCTACTC+CGG 0.623202 8_1:+53243646 Msa1200550:CDS
ACCCTTTCAACGACTGCGGG+AGG 0.623701 8_1:+53245151 Msa1200550:three_prime_UTR
GAAGAGCCTAAAATAACAGG+TGG 0.623967 8_1:-53237754 None:intergenic
GTTACCTGCGAGAGTGCTCA+CGG 0.624346 8_1:+53241804 Msa1200550:CDS
GTGGTTAATAACAATAGCAG+TGG 0.625816 8_1:-53244019 None:intergenic
GTCTACCCTTTCAACGACTG+CGG 0.627437 8_1:+53245147 Msa1200550:three_prime_UTR
AGGTAACTGTTGCATGCCTG+AGG 0.627973 8_1:-53244715 None:intergenic
ACCAGTGTCTCTCTGGACAC+CGG 0.629610 8_1:-53241897 None:intergenic
AACTGACCGACATACGCAGA+AGG 0.630474 8_1:-53241388 None:intergenic
TGATACTGTTATCAAAGTTG+AGG 0.630783 8_1:-53242137 None:intergenic
TAGGAACTGTGTGTTTGAGA+TGG 0.631384 8_1:+53244376 Msa1200550:CDS
AGGTTACAGAAGCAGTGACA+TGG 0.632873 8_1:+53237593 Msa1200550:CDS
TGGTGAATCAAATGCACAGA+TGG 0.633052 8_1:+53243963 Msa1200550:CDS
GTGTGATACCCGATCTGCAG+GGG 0.635939 8_1:+53245190 Msa1200550:three_prime_UTR
ACTGCACTGAGGTTCCACTA+AGG 0.636660 8_1:+53244193 Msa1200550:CDS
ATTCACCGGAGTAGACATCA+TGG 0.639303 8_1:-53243651 None:intergenic
ATAACCCTAACCTCCCTGGT+AGG 0.639362 8_1:+53235173 Msa1200550:five_prime_UTR
GCTGTCCATAGAATATGGCT+CGG 0.640093 8_1:-53243728 None:intergenic
TTAGATAGAAGCAAAAGAGA+CGG 0.642841 8_1:-53242307 None:intergenic
ACTGATTGTAATAGGACGAG+AGG 0.644396 8_1:+53245435 Msa1200550:three_prime_UTR
CTTTCTGTAGAGGAAGAGGA+TGG 0.645731 8_1:+53244225 Msa1200550:CDS
AGTGTGATACCCGATCTGCA+GGG 0.645794 8_1:+53245189 Msa1200550:three_prime_UTR
GGCCTATCATACACTGCGAG+AGG 0.646278 8_1:+53237043 Msa1200550:CDS
AATCACTTCACCATACTCAT+GGG 0.646416 8_1:+53244936 Msa1200550:three_prime_UTR
AAAGCATGATGGGTTTAGGT+CGG 0.649995 8_1:-53243912 None:intergenic
TGTTGCATGCCTGAGGCAAG+TGG 0.650035 8_1:-53244708 None:intergenic
AGGACGTGTTTCATACAACA+TGG 0.651453 8_1:+53244255 Msa1200550:CDS
ATCAACATTATCATGTAACA+AGG 0.652503 8_1:-53245014 None:intergenic
AAAACTGCCGGATAAGAATG+TGG 0.654600 8_1:+53244470 Msa1200550:CDS
TTATTGAGTAGTCTTAGGAG+TGG 0.665096 8_1:+53245336 Msa1200550:intron
TGAATGGCATCAAGTAATGG+TGG 0.668380 8_1:-53244038 None:intergenic
GAACTGTGTGTTTGAGATGG+AGG 0.670109 8_1:+53244379 Msa1200550:CDS
GCAAAGAGAAGTTGTACACA+AGG 0.670816 8_1:+53241943 Msa1200550:CDS
AATGTCAGAAACTCCCAATG+AGG 0.673971 8_1:+53241339 Msa1200550:CDS
AAGATCGGGACAACCTACCA+GGG 0.678529 8_1:-53235186 None:intergenic
GATTGCATTACGGAAGCGAG+CGG 0.685686 8_1:+53236017 Msa1200550:five_prime_UTR
TCCATACTCACAATCAATGG+CGG 0.688315 8_1:-53244498 None:intergenic
TGAAGTGATTACAAAATGAG+GGG 0.688413 8_1:-53244923 None:intergenic
AAGAGAAGTTGTACACAAGG+AGG 0.692105 8_1:+53241946 Msa1200550:CDS
CAATCCTCCAATGTCCAGAG+AGG 0.699069 8_1:-53243466 None:intergenic
TCTCCCAAGATTGCATAAGG+GGG 0.703536 8_1:-53244525 None:intergenic
GTTGCATGCCTGAGGCAAGT+GGG 0.705741 8_1:-53244707 None:intergenic
ACTCCCAATGAGGTTGACAG+CGG 0.706466 8_1:+53241349 Msa1200550:CDS
AACCCAAGAAGACAATGTTG+TGG 0.718396 8_1:-53244436 None:intergenic
ATACCGTTAACGATGAAGGG+AGG 0.727805 8_1:-53235341 None:intergenic
TGTGTGTTTGAGATGGAGGA+GGG 0.727942 8_1:+53244383 Msa1200550:CDS
ACAAGCATGACCAACCTGAG+CGG 0.728554 8_1:-53242076 None:intergenic
CCAAGACACAGATCTACCTG+TGG 0.731031 8_1:-53243565 None:intergenic
TATGTCACTAGACATAGAGG+AGG 0.731369 8_1:+53245073 Msa1200550:three_prime_UTR
AATCTTGTGGATGTGAAGGG+AGG 0.733484 8_1:+53243682 Msa1200550:CDS
ATCGGGACAACCTACCAGGG+AGG 0.745882 8_1:-53235183 None:intergenic
TAGTGCGAAGAACTGCACTG+AGG 0.760963 8_1:+53244182 Msa1200550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAAAAATGAAAAACTT+AGG + chr8_1:53236589-53236608 Msa1200550:intron 10.0%
!! ATAAAAAAATGAAAAACTTA+GGG + chr8_1:53236590-53236609 Msa1200550:intron 10.0%
!! ATTAACATAATAATTGAAAA+AGG + chr8_1:53236776-53236795 Msa1200550:intron 10.0%
!! ATTATAAAAGCTAATAAAAA+TGG - chr8_1:53237895-53237914 None:intergenic 10.0%
!! GTATATATATATTTGTATAT+AGG - chr8_1:53240854-53240873 None:intergenic 10.0%
!! AAATATATATATACTATTAC+TGG + chr8_1:53240860-53240879 Msa1200550:intron 10.0%
!! TTATTTATGTTTACTTAAAT+AGG + chr8_1:53242897-53242916 Msa1200550:intron 10.0%
!!! TCATTTTCTCAAAATTTTAT+CGG + chr8_1:53235859-53235878 Msa1200550:intron 15.0%
!!! ATATCACATTACATTTTATT+AGG - chr8_1:53238222-53238241 None:intergenic 15.0%
!! GAAATATTAAAAACGATAAT+CGG - chr8_1:53238483-53238502 None:intergenic 15.0%
!! TTAATATACTATTTCAGTAT+TGG + chr8_1:53238515-53238534 Msa1200550:intron 15.0%
!! AGATAAACAATAAATAAAGA+AGG + chr8_1:53238726-53238745 Msa1200550:intron 15.0%
!! GATAAACAATAAATAAAGAA+GGG + chr8_1:53238727-53238746 Msa1200550:intron 15.0%
!! GATAAACAATAAATAAAGAA+GGG - chr8_1:53238727-53238746 None:intergenic 15.0%
!! AGATAAACAATAAATAAAGA+AGG - chr8_1:53238726-53238745 None:intergenic 15.0%
!! ATCTGTCAATTTATTTATAT+TGG + chr8_1:53238845-53238864 Msa1200550:intron 15.0%
!! AAGCAATCAAAAAATATAAT+TGG - chr8_1:53240325-53240344 None:intergenic 15.0%
!!! GTCATTTTCTAAAAGAATTA+CGG + chr8_1:53235779-53235798 Msa1200550:intron 20.0%
!!! GTTTTATTGAGTTTATGAAT+GGG + chr8_1:53236147-53236166 Msa1200550:intron 20.0%
!!! TTGTTGATTTTTTAGTCATT+GGG + chr8_1:53236335-53236354 Msa1200550:intron 20.0%
!! TATAAACAAGACATAAAAAC+AGG - chr8_1:53236640-53236659 None:intergenic 20.0%
!! AATGGAAAAATAAAGTCAAA+AGG - chr8_1:53236860-53236879 None:intergenic 20.0%
!! ATATTGTACATATGTTAACA+TGG + chr8_1:53237299-53237318 Msa1200550:intron 20.0%
!! TATTGTACATATGTTAACAT+GGG + chr8_1:53237300-53237319 Msa1200550:intron 20.0%
!! TATTAATTACTATAGGTCAT+AGG - chr8_1:53237357-53237376 None:intergenic 20.0%
!! GCAACTTTATTAATTACTAT+AGG - chr8_1:53237364-53237383 None:intergenic 20.0%
!! AATACATATAAAAAGCTAGT+TGG + chr8_1:53237631-53237650 Msa1200550:CDS 20.0%
!! TTACAAAAAAGTCTATATAC+CGG - chr8_1:53237941-53237960 None:intergenic 20.0%
!!! ATTATTTTTACTTGTGTCTT+TGG + chr8_1:53238289-53238308 Msa1200550:intron 20.0%
!! TAGTTTATCTTTGTACTAAT+AGG - chr8_1:53238541-53238560 None:intergenic 20.0%
!! TTTAAAAAATCTCTATTTGC+TGG + chr8_1:53238587-53238606 Msa1200550:intron 20.0%
!!! TTGATGTTTAAAATGAACAA+GGG - chr8_1:53238613-53238632 None:intergenic 20.0%
!!! TTTGATGTTTAAAATGAACA+AGG - chr8_1:53238614-53238633 None:intergenic 20.0%
!! TTAAATGAACATAAATGTGA+GGG - chr8_1:53238663-53238682 None:intergenic 20.0%
!! ATTAAATGAACATAAATGTG+AGG - chr8_1:53238664-53238683 None:intergenic 20.0%
!! GACAATAAATAAAGAATAGA+AGG + chr8_1:53238753-53238772 Msa1200550:intron 20.0%
!!! TGTTTTTTCACTTTTTTGTA+TGG - chr8_1:53239133-53239152 None:intergenic 20.0%
!! AAATGAAAATCATTCGTTTA+AGG - chr8_1:53240043-53240062 None:intergenic 20.0%
!!! TGATTTTCATTTGATTTCAT+TGG + chr8_1:53240051-53240070 Msa1200550:intron 20.0%
!!! TTGGGCTATTTTTTAAATTT+GGG - chr8_1:53240214-53240233 None:intergenic 20.0%
!!! ATTGGGCTATTTTTTAAATT+TGG - chr8_1:53240215-53240234 None:intergenic 20.0%
!! AATTTGTATCCATTATTGAA+GGG + chr8_1:53240434-53240453 Msa1200550:intron 20.0%
!! GAATAAAAAACTATCACATT+TGG - chr8_1:53240461-53240480 None:intergenic 20.0%
!! AAAAAGGTGAAATAGTTATA+AGG + chr8_1:53240553-53240572 Msa1200550:intron 20.0%
!! AAAAGGTGAAATAGTTATAA+GGG + chr8_1:53240554-53240573 Msa1200550:intron 20.0%
!! AAAATAAAGCTAAAAACCAA+CGG - chr8_1:53240580-53240599 None:intergenic 20.0%
!! AACAAATTATTAGATTCTCA+TGG - chr8_1:53241036-53241055 None:intergenic 20.0%
!! TACTATTCAATTATGACTTA+CGG - chr8_1:53241454-53241473 None:intergenic 20.0%
!!! TTTTGCTTCTATCTAATAAA+TGG + chr8_1:53242314-53242333 Msa1200550:CDS 20.0%
!! TTAAAGATGTTCAAAGATAT+AGG - chr8_1:53242625-53242644 None:intergenic 20.0%
!!! TTTTTCTCTCAAAATTTGTA+TGG + chr8_1:53243163-53243182 Msa1200550:intron 20.0%
!!! ATGTAAAATATTTTGTATCC+CGG - chr8_1:53244962-53244981 None:intergenic 20.0%
!!! AAATATTTTACATGGAAAAG+CGG + chr8_1:53244969-53244988 Msa1200550:three_prime_UTR 20.0%
!!! GTTTTAGTCATAATCGAATT+AGG - chr8_1:53235013-53235032 None:intergenic 25.0%
!! AATAGATAGGTTGAGATTAA+GGG - chr8_1:53235215-53235234 None:intergenic 25.0%
!! TAATAGATAGGTTGAGATTA+AGG - chr8_1:53235216-53235235 None:intergenic 25.0%
!!! AGATTGATTTTGGATAAATC+TGG - chr8_1:53235272-53235291 None:intergenic 25.0%
!!! CTTATTGAAGAGATTGATTT+TGG - chr8_1:53235282-53235301 None:intergenic 25.0%
! AAGAGAATGTTATTACTTGA+TGG - chr8_1:53235492-53235511 None:intergenic 25.0%
! AATATACAAACCATTTGCAT+TGG - chr8_1:53235639-53235658 None:intergenic 25.0%
!!! ATTAACCTTCACTAGTTTTA+TGG + chr8_1:53235666-53235685 Msa1200550:intron 25.0%
!!! TTAACCTTCACTAGTTTTAT+GGG + chr8_1:53235667-53235686 Msa1200550:intron 25.0%
! TGTGATTAATTTATAGTGTG+TGG + chr8_1:53235952-53235971 Msa1200550:intron 25.0%
! AAGATAGAATGATTGCATTA+CGG + chr8_1:53236007-53236026 Msa1200550:five_prime_UTR 25.0%
!!! GGTTTTATTGAGTTTATGAA+TGG + chr8_1:53236146-53236165 Msa1200550:intron 25.0%
!!! AATTTTGTTGTTTTTTGTGC+AGG + chr8_1:53236170-53236189 Msa1200550:intron 25.0%
!! AATATCTTTTCGGAATTATC+AGG + chr8_1:53236199-53236218 Msa1200550:five_prime_UTR 25.0%
!!! GTTGTTGATTTTTTAGTCAT+TGG + chr8_1:53236334-53236353 Msa1200550:intron 25.0%
! AGAAACTGAATAAAGAAAAC+AGG - chr8_1:53236516-53236535 None:intergenic 25.0%
!!! GTTCTTGTTTTCAAATATGT+TGG + chr8_1:53236696-53236715 Msa1200550:intron 25.0%
!! TTGTTTTCAAATATGTTGGT+TGG + chr8_1:53236700-53236719 Msa1200550:intron 25.0%
! GTATTTATTGTGGTATATGT+TGG + chr8_1:53236828-53236847 Msa1200550:intron 25.0%
!! AGAAGCAATGAAATTTTATG+AGG + chr8_1:53237019-53237038 Msa1200550:exon 25.0%
!! TTTTATATGTATTCTTGTGC+TGG - chr8_1:53237624-53237643 None:intergenic 25.0%
! AGTAGACAATATTTGGTATT+TGG + chr8_1:53237691-53237710 Msa1200550:CDS 25.0%
!!! AATTTTCCACCTGTTATTTT+AGG + chr8_1:53237748-53237767 Msa1200550:CDS 25.0%
! CATACATTACATGTTTAGAA+AGG + chr8_1:53237857-53237876 Msa1200550:intron 25.0%
! AATTAGTATCACAATTCCAA+TGG - chr8_1:53237998-53238017 None:intergenic 25.0%
!!! GATTTTGTTTTAATCATCGT+TGG + chr8_1:53238145-53238164 Msa1200550:intron 25.0%
!! GTTACTCAAAACATTAGTTT+CGG - chr8_1:53238192-53238211 None:intergenic 25.0%
! CAAGTAAAAATAATTCGACT+CGG - chr8_1:53238283-53238302 None:intergenic 25.0%
!! TTTCCTTCCATTTTGAATAA+AGG - chr8_1:53238329-53238348 None:intergenic 25.0%
! TTAAACATCAAAAGAAGAGA+TGG + chr8_1:53238622-53238641 Msa1200550:intron 25.0%
!! CCACTGTTAAATTTTCATTT+GGG + chr8_1:53238868-53238887 Msa1200550:intron 25.0%
!! CACTGTTAAATTTTCATTTG+GGG + chr8_1:53238869-53238888 Msa1200550:intron 25.0%
! TTTAAAGATTAATCAGTGCA+CGG - chr8_1:53238902-53238921 None:intergenic 25.0%
! TCTCATATGAAAAGATATAG+AGG - chr8_1:53238933-53238952 None:intergenic 25.0%
!! GTTTCTCTTATAGTTTTTCA+AGG - chr8_1:53239549-53239568 None:intergenic 25.0%
! AAAGATCTAGATTAATGAGT+TGG + chr8_1:53239584-53239603 Msa1200550:intron 25.0%
! ACAAATCACAAATGAAAACA+GGG - chr8_1:53239809-53239828 None:intergenic 25.0%
! AACAAATCACAAATGAAAAC+AGG - chr8_1:53239810-53239829 None:intergenic 25.0%
! CATTAAATCCAAAATATGAG+AGG - chr8_1:53240005-53240024 None:intergenic 25.0%
!!! CTCTCATATTTTGGATTTAA+TGG + chr8_1:53240003-53240022 Msa1200550:intron 25.0%
! CTTGAAGACATTTATATTGA+AGG + chr8_1:53240116-53240135 Msa1200550:intron 25.0%
! ACATTTATATTGAAGGAAGT+TGG + chr8_1:53240123-53240142 Msa1200550:intron 25.0%
! AAATCAGGGACATAAAATAA+TGG - chr8_1:53240238-53240257 None:intergenic 25.0%
!!! TTGATTGCTTTTTTAGTTGT+TGG + chr8_1:53240335-53240354 Msa1200550:intron 25.0%
! CAATTTGTATCCATTATTGA+AGG + chr8_1:53240433-53240452 Msa1200550:intron 25.0%
!!! TATTTTTGAACAATGTAAGC+TGG - chr8_1:53240500-53240519 None:intergenic 25.0%
! AAATAAAACTTCGAACACAA+AGG - chr8_1:53240530-53240549 None:intergenic 25.0%
!!! CGAAGTTTTATTTCAGAAAA+AGG + chr8_1:53240537-53240556 Msa1200550:intron 25.0%
!!! GTTGGTTTTTAGCTTTATTT+TGG + chr8_1:53240579-53240598 Msa1200550:intron 25.0%
!!! AAGTCTTCTATTTTAATCCA+TGG + chr8_1:53240774-53240793 Msa1200550:intron 25.0%
!!! AGTCTTCTATTTTAATCCAT+GGG + chr8_1:53240775-53240794 Msa1200550:intron 25.0%
!! TGGTACTATTAAAGATTTTG+TGG + chr8_1:53241832-53241851 Msa1200550:CDS 25.0%
! TGAAGAAATTACAAGAAGAT+CGG - chr8_1:53242219-53242238 None:intergenic 25.0%
! TTCTATCTAATAAATGGCTA+CGG + chr8_1:53242320-53242339 Msa1200550:CDS 25.0%
! TACATTCGTAGTTTCTATTT+AGG + chr8_1:53242438-53242457 Msa1200550:intron 25.0%
! ACATTCGTAGTTTCTATTTA+GGG + chr8_1:53242439-53242458 Msa1200550:intron 25.0%
! TTATGTTTACTTAAATAGGC+CGG + chr8_1:53242901-53242920 Msa1200550:intron 25.0%
!!! GCTTTTTTCTTAAATAGAGA+AGG - chr8_1:53243005-53243024 None:intergenic 25.0%
! AATTTAAAGAATAGAAGCTC+GGG - chr8_1:53243120-53243139 None:intergenic 25.0%
! GAATTTAAAGAATAGAAGCT+CGG - chr8_1:53243121-53243140 None:intergenic 25.0%
!! TGTTTTGTCTATTATTGTTG+TGG + chr8_1:53243214-53243233 Msa1200550:intron 25.0%
!!! TATCATTTTTCAGATCAAAG+TGG + chr8_1:53243352-53243371 Msa1200550:intron 25.0%
! AAGAAAATACAACAGTCATT+TGG + chr8_1:53243823-53243842 Msa1200550:CDS 25.0%
! TCTGTTCCCTTTATTAAAAA+TGG + chr8_1:53243853-53243872 Msa1200550:CDS 25.0%
! CTGTTCCCTTTATTAAAAAT+GGG + chr8_1:53243854-53243873 Msa1200550:CDS 25.0%
! TGTTCCCTTTATTAAAAATG+GGG + chr8_1:53243855-53243874 Msa1200550:CDS 25.0%
!!! GAATCCCCATTTTTAATAAA+GGG - chr8_1:53243862-53243881 None:intergenic 25.0%
!!! AGAATCCCCATTTTTAATAA+AGG - chr8_1:53243863-53243882 None:intergenic 25.0%
! TTATTAAAAATGGGGATTCT+TGG + chr8_1:53243863-53243882 Msa1200550:CDS 25.0%
! ATAAGAACTTGCAAATTGAA+GGG + chr8_1:53243995-53244014 Msa1200550:CDS 25.0%
!! GGGATACAAAATATTTTACA+TGG + chr8_1:53244961-53244980 Msa1200550:three_prime_UTR 25.0%
! ATCAACATTATCATGTAACA+AGG - chr8_1:53245017-53245036 None:intergenic 25.0%
!! AAACTCATACTGATTGTAAT+AGG + chr8_1:53245427-53245446 Msa1200550:three_prime_UTR 25.0%
! GTTGATTGTTTGTTTGAGAT+TGG - chr8_1:53235116-53235135 None:intergenic 30.0%
CTCAAACAAACAATCAACAA+TGG + chr8_1:53235118-53235137 Msa1200550:five_prime_UTR 30.0%
TGGTTGTTGTGATAATAGAT+AGG - chr8_1:53235228-53235247 None:intergenic 30.0%
!! TATTCGATCAGAAGTATTAG+TGG - chr8_1:53235695-53235714 None:intergenic 30.0%
GTATTGTTTGATTGTAGATG+AGG + chr8_1:53235978-53235997 Msa1200550:intron 30.0%
GAAACTCTGAATCATCATTA+GGG - chr8_1:53236074-53236093 None:intergenic 30.0%
TGAAACTCTGAATCATCATT+AGG - chr8_1:53236075-53236094 None:intergenic 30.0%
AGTTTCAATTGTCTCTTAAC+AGG + chr8_1:53236088-53236107 Msa1200550:five_prime_UTR 30.0%
AATTGTCTCTTAACAGGTAT+TGG + chr8_1:53236094-53236113 Msa1200550:intron 30.0%
!!! ACAGGTATTGGATTTTTTAC+TGG + chr8_1:53236106-53236125 Msa1200550:intron 30.0%
TCTATTATAGAGAAGAAGGA+AGG + chr8_1:53236224-53236243 Msa1200550:five_prime_UTR 30.0%
GTGGCTTAAATATAAAGCAT+CGG - chr8_1:53236387-53236406 None:intergenic 30.0%
!!! TCAGTTTCTGATTTTTTCTC+TGG + chr8_1:53236527-53236546 Msa1200550:intron 30.0%
CATGAAACAGAATAGAAATG+AGG + chr8_1:53236733-53236752 Msa1200550:intron 30.0%
GACTGAAATGGTATTTATTG+TGG + chr8_1:53236818-53236837 Msa1200550:intron 30.0%
TATGAGAAATAGCTGTAGAA+TGG - chr8_1:53236878-53236897 None:intergenic 30.0%
ATAGAATGCACACTTGAAAA+AGG - chr8_1:53236907-53236926 None:intergenic 30.0%
! AGCAATGAAATTTTATGAGG+AGG + chr8_1:53237022-53237041 Msa1200550:exon 30.0%
AACAATAGCATTCTCAATCT+AGG - chr8_1:53237140-53237159 None:intergenic 30.0%
TAGATTGAGAATGCTATTGT+TGG + chr8_1:53237139-53237158 Msa1200550:intron 30.0%
TCAATGTTTGTGTGGTTATT+AGG + chr8_1:53237402-53237421 Msa1200550:intron 30.0%
! AGTGTAATGGAAACAGAAAA+TGG - chr8_1:53237460-53237479 None:intergenic 30.0%
ACGCTTAGTTGAGATAAAAT+CGG + chr8_1:53237519-53237538 Msa1200550:CDS 30.0%
AGATGCAATATTTGTTCACT+GGG + chr8_1:53237660-53237679 Msa1200550:CDS 30.0%
! TTTGGTATTTGGTGAATTGT+TGG + chr8_1:53237702-53237721 Msa1200550:CDS 30.0%
TACATGTTTAGAAAGGCAAA+CGG + chr8_1:53237864-53237883 Msa1200550:intron 30.0%
!!! CTATATTGACAGTTTTGAGA+TGG + chr8_1:53238019-53238038 Msa1200550:intron 30.0%
! TTCTTTAGCAGTTTTCGAAA+TGG + chr8_1:53238046-53238065 Msa1200550:intron 30.0%
CTACTTTGCTTGCAAATAAA+AGG - chr8_1:53238089-53238108 None:intergenic 30.0%
AAAAGTGATTCCTCATGATT+TGG - chr8_1:53238412-53238431 None:intergenic 30.0%
GATTAGAAATCTCTATTTGC+TGG + chr8_1:53238788-53238807 Msa1200550:intron 30.0%
AAAGAAGGGAAAAAGAACAA+GGG - chr8_1:53238814-53238833 None:intergenic 30.0%
TAAAGAAGGGAAAAAGAACA+AGG - chr8_1:53238815-53238834 None:intergenic 30.0%
! GCCACTGTTAAATTTTCATT+TGG + chr8_1:53238867-53238886 Msa1200550:intron 30.0%
CCCAAATGAAAATTTAACAG+TGG - chr8_1:53238871-53238890 None:intergenic 30.0%
GGTGTAACTACTGAATTTAT+GGG - chr8_1:53239035-53239054 None:intergenic 30.0%
TAAACCATCAAATTCAAGCT+AGG + chr8_1:53239168-53239187 Msa1200550:intron 30.0%
! CACCAACATGATAATGAATT+AGG + chr8_1:53239302-53239321 Msa1200550:intron 30.0%
CACCTAATTCATTATCATGT+TGG - chr8_1:53239307-53239326 None:intergenic 30.0%
!! GGGACATAAAATAATGGATT+GGG - chr8_1:53240232-53240251 None:intergenic 30.0%
!! AGGGACATAAAATAATGGAT+TGG - chr8_1:53240233-53240252 None:intergenic 30.0%
!!! TTCAGTTAATCTAGTTTTCG+TGG + chr8_1:53240384-53240403 Msa1200550:intron 30.0%
ATTATTAATGTGAGAGTGAC+AGG - chr8_1:53240812-53240831 None:intergenic 30.0%
TAATCCATTCACACTAGATA+TGG + chr8_1:53240828-53240847 Msa1200550:intron 30.0%
ACGGACAAAGTAATCAAAAT+TGG - chr8_1:53240946-53240965 None:intergenic 30.0%
! TCATGCGTTCTAAATTTCAA+TGG + chr8_1:53241236-53241255 Msa1200550:intron 30.0%
! CATGCGTTCTAAATTTCAAT+GGG + chr8_1:53241237-53241256 Msa1200550:intron 30.0%
! TGAAATCATCGTTTTCCATT+TGG + chr8_1:53241510-53241529 Msa1200550:intron 30.0%
TCCTTCAGAAACAGTATAAT+GGG - chr8_1:53241564-53241583 None:intergenic 30.0%
TTCCTTCAGAAACAGTATAA+TGG - chr8_1:53241565-53241584 None:intergenic 30.0%
!! ATACTGTTTCTGAAGGAAAA+AGG + chr8_1:53241567-53241586 Msa1200550:CDS 30.0%
! ACAGTGCTATTAAAATTCAG+AGG + chr8_1:53241642-53241661 Msa1200550:CDS 30.0%
ACCTTCAGCAAAATATTCTT+TGG - chr8_1:53241696-53241715 None:intergenic 30.0%
TGATACTGTTATCAAAGTTG+AGG - chr8_1:53242140-53242159 None:intergenic 30.0%
! CTCTACAGATTGATGTTTTT+GGG - chr8_1:53242251-53242270 None:intergenic 30.0%
TTAGATAGAAGCAAAAGAGA+CGG - chr8_1:53242310-53242329 None:intergenic 30.0%
TTGACCTATAATATCCAATC+TGG + chr8_1:53242343-53242362 Msa1200550:CDS 30.0%
CTTACCAGATTGGATATTAT+AGG - chr8_1:53242350-53242369 None:intergenic 30.0%
AGAAACATTTAAAGATGTGC+TGG - chr8_1:53242396-53242415 None:intergenic 30.0%
CATTCGTAGTTTCTATTTAG+GGG + chr8_1:53242440-53242459 Msa1200550:intron 30.0%
!! TAGCTTTAAACAAAATTGGC+AGG - chr8_1:53242512-53242531 None:intergenic 30.0%
!! GCCAATTTTGTTTAAAGCTA+AGG + chr8_1:53242512-53242531 Msa1200550:intron 30.0%
!! GCCTTAGCTTTAAACAAAAT+TGG - chr8_1:53242516-53242535 None:intergenic 30.0%
! AAAGATATAGGCTTTTAACC+AGG - chr8_1:53242613-53242632 None:intergenic 30.0%
CTATTATGATAATCAACACG+AGG + chr8_1:53242706-53242725 Msa1200550:intron 30.0%
! AGAAGCCTATTTAGCTTAAA+AGG - chr8_1:53242969-53242988 None:intergenic 30.0%
ATAGAAATAAGGATGGGAAT+AGG - chr8_1:53243079-53243098 None:intergenic 30.0%
GGATGAATAGAAATAAGGAT+GGG - chr8_1:53243085-53243104 None:intergenic 30.0%
! ACAAGAACTGCATCTTTTAT+GGG - chr8_1:53243505-53243524 None:intergenic 30.0%
! AACAAGAACTGCATCTTTTA+TGG - chr8_1:53243506-53243525 None:intergenic 30.0%
AAGATTGATCTTCAATTCAC+CGG - chr8_1:53243668-53243687 None:intergenic 30.0%
TGAATTGAAGATCAATCTTG+TGG + chr8_1:53243669-53243688 Msa1200550:CDS 30.0%
CATGCAGATTAGAAATTAAG+TGG + chr8_1:53243887-53243906 Msa1200550:CDS 30.0%
AAAGATACGTAAAGCATGAT+GGG - chr8_1:53243925-53243944 None:intergenic 30.0%
ATCATGCTTTACGTATCTTT+GGG + chr8_1:53243925-53243944 Msa1200550:CDS 30.0%
CTTCAATTTGCAAGTTCTTA+TGG - chr8_1:53243996-53244015 None:intergenic 30.0%
CATAAGAACTTGCAAATTGA+AGG + chr8_1:53243994-53244013 Msa1200550:CDS 30.0%
TGTTCTTAGTGAGTAACAAT+GGG - chr8_1:53244071-53244090 None:intergenic 30.0%
TTGTTCTTAGTGAGTAACAA+TGG - chr8_1:53244072-53244091 None:intergenic 30.0%
!!! TAACAATGAGCACAGTTTTT+TGG - chr8_1:53244164-53244183 None:intergenic 30.0%
ATTCTGATACAGTATGTGAA+GGG - chr8_1:53244552-53244571 None:intergenic 30.0%
AATTCTGATACAGTATGTGA+AGG - chr8_1:53244553-53244572 None:intergenic 30.0%
GCAAGAAATCAAATACTCAT+TGG + chr8_1:53244593-53244612 Msa1200550:CDS 30.0%
!! CACAAAGTTTTGTGTTATGT+GGG + chr8_1:53244622-53244641 Msa1200550:CDS 30.0%
!!! TTTTGAAATGAGGTTTGGAA+GGG - chr8_1:53244815-53244834 None:intergenic 30.0%
TGAAGTGATTACAAAATGAG+GGG - chr8_1:53244926-53244945 None:intergenic 30.0%
GTGAAGTGATTACAAAATGA+GGG - chr8_1:53244927-53244946 None:intergenic 30.0%
CTAATCTAAATCACTAAGTG+AGG - chr8_1:53245481-53245500 None:intergenic 30.0%
ACTTGTTCTCTATAGTCATC+GGG - chr8_1:53235035-53235054 None:intergenic 35.0%
CACTTGTTCTCTATAGTCAT+CGG - chr8_1:53235036-53235055 None:intergenic 35.0%
! TGTTTGTTTGAGATTGGATC+TGG - chr8_1:53235110-53235129 None:intergenic 35.0%
TGAGATTAAGGGATGAAGAT+CGG - chr8_1:53235204-53235223 None:intergenic 35.0%
AAACCAGATCCTGATTCAAT+CGG + chr8_1:53235305-53235324 Msa1200550:five_prime_UTR 35.0%
! GAAGTATTTCCGATTGAATC+AGG - chr8_1:53235317-53235336 None:intergenic 35.0%
AAGATACCGTTAACGATGAA+GGG - chr8_1:53235347-53235366 None:intergenic 35.0%
GGTGTCTATTATAGAGAAGA+AGG + chr8_1:53236220-53236239 Msa1200550:five_prime_UTR 35.0%
ATTATAGAGAAGAAGGAAGG+AGG + chr8_1:53236227-53236246 Msa1200550:five_prime_UTR 35.0%
TTATAGAGAAGAAGGAAGGA+GGG + chr8_1:53236228-53236247 Msa1200550:five_prime_UTR 35.0%
AAAACAGGATCTAAGCTGAT+AGG - chr8_1:53236501-53236520 None:intergenic 35.0%
!! TTCTCTGGTCTTGTTAGTTA+TGG + chr8_1:53236542-53236561 Msa1200550:intron 35.0%
TGAAAAACTTAGGGCATGTA+TGG + chr8_1:53236599-53236618 Msa1200550:intron 35.0%
CATCAGTGGTGAAACAAAAT+CGG - chr8_1:53237106-53237125 None:intergenic 35.0%
AGGCATAGAAATATCATCAG+TGG - chr8_1:53237120-53237139 None:intergenic 35.0%
! CAAGGCACTTCATATACATA+AGG - chr8_1:53237226-53237245 None:intergenic 35.0%
CAGTTGCTATCTATGTTCAT+GGG - chr8_1:53237279-53237298 None:intergenic 35.0%
TCAGTTGCTATCTATGTTCA+TGG - chr8_1:53237280-53237299 None:intergenic 35.0%
CAAGCATTTCAATGTTTGTG+TGG + chr8_1:53237394-53237413 Msa1200550:intron 35.0%
! GTGGCAAAAATTTAGCGTTT+TGG - chr8_1:53237435-53237454 None:intergenic 35.0%
ATGGAAACAGAAAATGGATG+TGG - chr8_1:53237454-53237473 None:intergenic 35.0%
TCCATTACACTACAGATTGT+TGG + chr8_1:53237469-53237488 Msa1200550:intron 35.0%
CCATTACACTACAGATTGTT+GGG + chr8_1:53237470-53237489 Msa1200550:intron 35.0%
CATTACACTACAGATTGTTG+GGG + chr8_1:53237471-53237490 Msa1200550:intron 35.0%
TCAACATTGTTACTGCATAG+TGG + chr8_1:53237568-53237587 Msa1200550:CDS 35.0%
CAACATTGTTACTGCATAGT+GGG + chr8_1:53237569-53237588 Msa1200550:CDS 35.0%
TATATGTATTCTTGTGCTGG+CGG - chr8_1:53237621-53237640 None:intergenic 35.0%
CAGTGAACAAATATTGCATC+TGG - chr8_1:53237661-53237680 None:intergenic 35.0%
CAGATGCAATATTTGTTCAC+TGG + chr8_1:53237659-53237678 Msa1200550:CDS 35.0%
GTGGATGAGTAGACAATATT+TGG + chr8_1:53237684-53237703 Msa1200550:CDS 35.0%
GATGAAGAGCCTAAAATAAC+AGG - chr8_1:53237760-53237779 None:intergenic 35.0%
CTATCCTGCTTATTACTATC+AGG + chr8_1:53237804-53237823 Msa1200550:CDS 35.0%
CTAACCTGATAGTAATAAGC+AGG - chr8_1:53237811-53237830 None:intergenic 35.0%
GACAAGCTAAAGAGTTAAAG+AGG - chr8_1:53237838-53237857 None:intergenic 35.0%
CCATGCAAGAATTCTACTAT+TGG - chr8_1:53237970-53237989 None:intergenic 35.0%
CCAATAGTAGAATTCTTGCA+TGG + chr8_1:53237967-53237986 Msa1200550:intron 35.0%
GTAGTGTTAAATGCCTTTGA+TGG + chr8_1:53238111-53238130 Msa1200550:intron 35.0%
TCATGAAAAGATGCCATCAA+AGG - chr8_1:53238127-53238146 None:intergenic 35.0%
! CTTCCATTTTGAATAAAGGC+TGG - chr8_1:53238325-53238344 None:intergenic 35.0%
CAGCCTTTATTCAAAATGGA+AGG + chr8_1:53238323-53238342 Msa1200550:intron 35.0%
AATGAAACCCTCCCAAAATA+CGG + chr8_1:53238355-53238374 Msa1200550:intron 35.0%
AATGAACATAAATGTGAGGG+AGG - chr8_1:53238660-53238679 None:intergenic 35.0%
GGGTGTAACTACTGAATTTA+TGG - chr8_1:53239036-53239055 None:intergenic 35.0%
TTTGTATGGACCCAACATAT+GGG - chr8_1:53239119-53239138 None:intergenic 35.0%
! TTTTGTATGGACCCAACATA+TGG - chr8_1:53239120-53239139 None:intergenic 35.0%
TGACACAATGTTGTGCTATA+AGG + chr8_1:53239259-53239278 Msa1200550:intron 35.0%
ACCTATAGTAGAAAAGATGG+TGG + chr8_1:53239416-53239435 Msa1200550:intron 35.0%
! TCCACCATCTTTTCTACTAT+AGG - chr8_1:53239420-53239439 None:intergenic 35.0%
!! TAGAAAAGATGGTGGAAACT+AGG + chr8_1:53239424-53239443 Msa1200550:intron 35.0%
AGGAGAGTAGATCAAATGTA+TGG + chr8_1:53239495-53239514 Msa1200550:intron 35.0%
AGTCAAATCACTAGAATCAG+TGG + chr8_1:53239519-53239538 Msa1200550:intron 35.0%
CATGTGATTCACTTAAAGTG+AGG - chr8_1:53239773-53239792 None:intergenic 35.0%
ATCACAAATGAAAACAGGGA+GGG - chr8_1:53239805-53239824 None:intergenic 35.0%
AATCACAAATGAAAACAGGG+AGG - chr8_1:53239806-53239825 None:intergenic 35.0%
AGATGCTGGAAAAATGATGT+TGG - chr8_1:53239870-53239889 None:intergenic 35.0%
TGTTCATATTTCATGCCAGT+GGG - chr8_1:53239901-53239920 None:intergenic 35.0%
ATGTTCATATTTCATGCCAG+TGG - chr8_1:53239902-53239921 None:intergenic 35.0%
!! TTTGGTTTGTACATGTGAGA+GGG - chr8_1:53239939-53239958 None:intergenic 35.0%
TCACAAATACACTATGCCTT+TGG - chr8_1:53239957-53239976 None:intergenic 35.0%
CAAAATATGAGAGGTGAAAG+GGG - chr8_1:53239996-53240015 None:intergenic 35.0%
CCAAAATATGAGAGGTGAAA+GGG - chr8_1:53239997-53240016 None:intergenic 35.0%
TCCAAAATATGAGAGGTGAA+AGG - chr8_1:53239998-53240017 None:intergenic 35.0%
AAATATGATACTCTCCCAAC+CGG + chr8_1:53240169-53240188 Msa1200550:intron 35.0%
!! CATAAAGTGCTGCAAAATCA+GGG - chr8_1:53240252-53240271 None:intergenic 35.0%
!! ACATAAAGTGCTGCAAAATC+AGG - chr8_1:53240253-53240272 None:intergenic 35.0%
GATTAACTGAACCTCCAATA+AGG - chr8_1:53240375-53240394 None:intergenic 35.0%
ACATTTGGTCCCTTCAATAA+TGG - chr8_1:53240446-53240465 None:intergenic 35.0%
TTGTTTATCGCAAGAATCTC+TGG - chr8_1:53240672-53240691 None:intergenic 35.0%
AGATTCTTGCGATAAACAAG+AGG + chr8_1:53240673-53240692 Msa1200550:intron 35.0%
GATAAACAAGAGGATGCAAA+TGG + chr8_1:53240683-53240702 Msa1200550:intron 35.0%
TAGACCTTTGAACCTTGAAT+CGG + chr8_1:53240896-53240915 Msa1200550:intron 35.0%
TTGATTACTTTGTCCGTATG+TGG + chr8_1:53240949-53240968 Msa1200550:intron 35.0%
TGATTACTTTGTCCGTATGT+GGG + chr8_1:53240950-53240969 Msa1200550:intron 35.0%
TTGTTGTCTTTAAACCCACT+TGG + chr8_1:53241051-53241070 Msa1200550:intron 35.0%
TGTTGTCTTTAAACCCACTT+GGG + chr8_1:53241052-53241071 Msa1200550:intron 35.0%
!! ACCCATTATACTGTTTCTGA+AGG + chr8_1:53241560-53241579 Msa1200550:CDS 35.0%
CAAAATATTCTTTGGCCATC+TGG - chr8_1:53241688-53241707 None:intergenic 35.0%
! GCCAAAGAATATTTTGCTGA+AGG + chr8_1:53241692-53241711 Msa1200550:CDS 35.0%
! TGCTAGTCTATACAGAAAAG+AGG + chr8_1:53241751-53241770 Msa1200550:CDS 35.0%
! GCTAGTCTATACAGAAAAGA+GGG + chr8_1:53241752-53241771 Msa1200550:CDS 35.0%
TCTATACAGAAAAGAGGGAT+GGG + chr8_1:53241757-53241776 Msa1200550:CDS 35.0%
!!! AAGGAGGTTTTTGAGTTTGT+TGG + chr8_1:53241962-53241981 Msa1200550:CDS 35.0%
TTGATCGATCTCAACAGTAA+GGG - chr8_1:53242179-53242198 None:intergenic 35.0%
ATTGATCGATCTCAACAGTA+AGG - chr8_1:53242180-53242199 None:intergenic 35.0%
! CCTCTACAGATTGATGTTTT+TGG - chr8_1:53242252-53242271 None:intergenic 35.0%
CCAAAAACATCAATCTGTAG+AGG + chr8_1:53242249-53242268 Msa1200550:CDS 35.0%
ATAAAAAGTAGGCCTATGAC+AGG - chr8_1:53242549-53242568 None:intergenic 35.0%
! GATAATCAACACGAGGTTTT+AGG + chr8_1:53242713-53242732 Msa1200550:intron 35.0%
AAAAGCCTCTTAAGCCTATT+AGG - chr8_1:53242927-53242946 None:intergenic 35.0%
!! TCTGGCCTTTTAAGCTAAAT+AGG + chr8_1:53242961-53242980 Msa1200550:intron 35.0%
! ATAGGCTTCTAAAAAAGCCT+AGG + chr8_1:53242979-53242998 Msa1200550:intron 35.0%
TTCTTAAATAGAGAAGGCCT+AGG - chr8_1:53242999-53243018 None:intergenic 35.0%
CGGATGAATAGAAATAAGGA+TGG - chr8_1:53243086-53243105 None:intergenic 35.0%
GCATCGGATGAATAGAAATA+AGG - chr8_1:53243090-53243109 None:intergenic 35.0%
! CAATTTTCGCAATAACAGAC+AGG - chr8_1:53243390-53243409 None:intergenic 35.0%
CTGTCTGTTATTGCGAAAAT+TGG + chr8_1:53243388-53243407 Msa1200550:CDS 35.0%
ATCAATCTTGTGGATGTGAA+GGG + chr8_1:53243679-53243698 Msa1200550:CDS 35.0%
CAAAGATACGTAAAGCATGA+TGG - chr8_1:53243926-53243945 None:intergenic 35.0%
CATCATGCTTTACGTATCTT+TGG + chr8_1:53243924-53243943 Msa1200550:CDS 35.0%
! TCTTTGGGTTATACTCCAAA+TGG + chr8_1:53243940-53243959 Msa1200550:CDS 35.0%
TTTGCAAGTTCTTATGGACA+TGG - chr8_1:53243990-53244009 None:intergenic 35.0%
GTGGTTAATAACAATAGCAG+TGG - chr8_1:53244022-53244041 None:intergenic 35.0%
!! GAGCTTTGAAATGTTCACAT+TGG - chr8_1:53244352-53244371 None:intergenic 35.0%
AACATTTCAAAGCTCAGACT+AGG + chr8_1:53244357-53244376 Msa1200550:CDS 35.0%
TACCACAACATTGTCTTCTT+GGG + chr8_1:53244434-53244453 Msa1200550:CDS 35.0%
TGTGACTAAACAAAAACTGC+CGG + chr8_1:53244458-53244477 Msa1200550:CDS 35.0%
CATTCCATACTCACAATCAA+TGG - chr8_1:53244504-53244523 None:intergenic 35.0%
!! GCACAAAGTTTTGTGTTATG+TGG + chr8_1:53244621-53244640 Msa1200550:CDS 35.0%
! CTGACAATGTGTTCAGATTT+TGG - chr8_1:53244675-53244694 None:intergenic 35.0%
GCAGATGTCATTGAAAATCT+AGG - chr8_1:53244738-53244757 None:intergenic 35.0%
!!! GTTTTGAAATGAGGTTTGGA+AGG - chr8_1:53244816-53244835 None:intergenic 35.0%
AAATGAGGGGCAAGAATAAA+CGG - chr8_1:53244913-53244932 None:intergenic 35.0%
GGTGAAGTGATTACAAAATG+AGG - chr8_1:53244928-53244947 None:intergenic 35.0%
TAATCACTTCACCATACTCA+TGG + chr8_1:53244935-53244954 Msa1200550:three_prime_UTR 35.0%
AATCACTTCACCATACTCAT+GGG + chr8_1:53244936-53244955 Msa1200550:three_prime_UTR 35.0%
! TCAAAGCACTTCATCATCTT+CGG - chr8_1:53245108-53245127 None:intergenic 35.0%
TCTTCTCAATTCAAAGTGCA+AGG - chr8_1:53245295-53245314 None:intergenic 35.0%
! TTATTGAGTAGTCTTAGGAG+TGG + chr8_1:53245336-53245355 Msa1200550:intron 35.0%
!! ACAAGTGTTGAAGAAGCTTC+TGG + chr8_1:53235049-53235068 Msa1200550:five_prime_UTR 40.0%
GAGATTAAGGGATGAAGATC+GGG - chr8_1:53235203-53235222 None:intergenic 40.0%
!! AGTGCTAATGTGTTGATTGG+TGG - chr8_1:53235248-53235267 None:intergenic 40.0%
!! GGAAGTGCTAATGTGTTGAT+TGG - chr8_1:53235251-53235270 None:intergenic 40.0%
TTTCCGATTGAATCAGGATC+TGG - chr8_1:53235311-53235330 None:intergenic 40.0%
CAAGATACCGTTAACGATGA+AGG - chr8_1:53235348-53235367 None:intergenic 40.0%
ACGGTATCTTGAAACGTGAT+TGG + chr8_1:53235357-53235376 Msa1200550:five_prime_UTR 40.0%
CAACGGAAGGAATCTTAGTA+CGG - chr8_1:53235394-53235413 None:intergenic 40.0%
! TTTCCGACTGATCGTGTTTT+TGG + chr8_1:53235425-53235444 Msa1200550:five_prime_UTR 40.0%
TCACCAAAAACACGATCAGT+CGG - chr8_1:53235431-53235450 None:intergenic 40.0%
!! TTTTTGGTGATCCTTCTCAG+TGG + chr8_1:53235441-53235460 Msa1200550:five_prime_UTR 40.0%
CTTGTTCACACCAATGCAAA+TGG + chr8_1:53235626-53235645 Msa1200550:five_prime_UTR 40.0%
GGTACCCATAAAACTAGTGA+AGG - chr8_1:53235674-53235693 None:intergenic 40.0%
TCAGTGTCTGTGTATGACAA+TGG + chr8_1:53235812-53235831 Msa1200550:intron 40.0%
CTGGAAATTGTTTGTGTGTG+AGG + chr8_1:53236125-53236144 Msa1200550:intron 40.0%
!!! TTGTTGTTTTTTGTGCAGGC+TGG + chr8_1:53236174-53236193 Msa1200550:intron 40.0%
ATTACCAGTTGTTGTGTCAG+TGG + chr8_1:53236458-53236477 Msa1200550:intron 40.0%
! ACTTAGGGCATGTATGGTTT+TGG + chr8_1:53236605-53236624 Msa1200550:intron 40.0%
TTGAAAAAGGACCCTTGAGA+AGG + chr8_1:53236789-53236808 Msa1200550:intron 40.0%
AGAAGGATTAGGGACTGAAA+TGG + chr8_1:53236806-53236825 Msa1200550:intron 40.0%
TCTAGATGCCATGAATTGCT+AGG + chr8_1:53236962-53236981 Msa1200550:intron 40.0%
TACAGCAACCTAGCAATTCA+TGG - chr8_1:53236973-53236992 None:intergenic 40.0%
ATGCAGAATTTCGAAGTGAC+TGG + chr8_1:53236994-53237013 Msa1200550:five_prime_UTR 40.0%
TATATGCTCCATCCATCTGT+TGG + chr8_1:53237165-53237184 Msa1200550:intron 40.0%
TAACACAACCAACAGATGGA+TGG - chr8_1:53237176-53237195 None:intergenic 40.0%
TCACTAACACAACCAACAGA+TGG - chr8_1:53237180-53237199 None:intergenic 40.0%
AATTCTCCTCACAACACACA+AGG - chr8_1:53237244-53237263 None:intergenic 40.0%
TTGCTATCTATGTTCATGGG+AGG - chr8_1:53237276-53237295 None:intergenic 40.0%
CCCAACAATCTGTAGTGTAA+TGG - chr8_1:53237473-53237492 None:intergenic 40.0%
! ATTGTTACTGCATAGTGGGA+AGG + chr8_1:53237573-53237592 Msa1200550:CDS 40.0%
CAATATTTGTTCACTGGGAG+TGG + chr8_1:53237665-53237684 Msa1200550:CDS 40.0%
GAAGAGCCTAAAATAACAGG+TGG - chr8_1:53237757-53237776 None:intergenic 40.0%
ATCTAAACCACTGTCAGAGT+GGG + chr8_1:53237777-53237796 Msa1200550:CDS 40.0%
!! CTCATGAGCATTGAGATTTC+CGG + chr8_1:53237919-53237938 Msa1200550:intron 40.0%
ACGCCAGCCTTTATTCAAAA+TGG + chr8_1:53238319-53238338 Msa1200550:intron 40.0%
ATGAAACCCTCCCAAAATAC+GGG + chr8_1:53238356-53238375 Msa1200550:intron 40.0%
! ATTTCCCTTCCCCGTATTTT+GGG - chr8_1:53238369-53238388 None:intergenic 40.0%
! TATTTCCCTTCCCCGTATTT+TGG - chr8_1:53238370-53238389 None:intergenic 40.0%
AATACGGGGAAGGGAAATAA+AGG + chr8_1:53238371-53238390 Msa1200550:intron 40.0%
ATCTAACCCTCCAAATCATG+AGG + chr8_1:53238399-53238418 Msa1200550:intron 40.0%
! GTGATTCCTCATGATTTGGA+GGG - chr8_1:53238408-53238427 None:intergenic 40.0%
! AGTGATTCCTCATGATTTGG+AGG - chr8_1:53238409-53238428 None:intergenic 40.0%
AGATTAATCAGTGCACGGAT+AGG - chr8_1:53238897-53238916 None:intergenic 40.0%
TATGAGACAGTGTTCAAGCT+AGG + chr8_1:53238996-53239015 Msa1200550:intron 40.0%
TGGGAACCAACAAGTAGTTA+CGG - chr8_1:53239083-53239102 None:intergenic 40.0%
TCATTCCTCACCCATATGTT+GGG + chr8_1:53239106-53239125 Msa1200550:intron 40.0%
ACCATCAAATTCAAGCTAGG+TGG + chr8_1:53239171-53239190 Msa1200550:intron 40.0%
ACCACCTAGCTTGAATTTGA+TGG - chr8_1:53239175-53239194 None:intergenic 40.0%
TTCAAGCTAGGTGGTTGAAA+TGG + chr8_1:53239180-53239199 Msa1200550:intron 40.0%
AATTAGGTGTAGCACAGATG+AGG + chr8_1:53239318-53239337 Msa1200550:intron 40.0%
GACAACATTAGAGAGAGTTG+TGG + chr8_1:53239389-53239408 Msa1200550:intron 40.0%
CGCACCTATAGTAGAAAAGA+TGG + chr8_1:53239413-53239432 Msa1200550:intron 40.0%
GAGAAGACCTGTAGATTCTA+TGG + chr8_1:53239470-53239489 Msa1200550:intron 40.0%
GACCTGTAGATTCTATGGTA+AGG + chr8_1:53239475-53239494 Msa1200550:intron 40.0%
CTCCTTACCATAGAATCTAC+AGG - chr8_1:53239480-53239499 None:intergenic 40.0%
AAGTCTTAATCCGCTAAGTG+GGG - chr8_1:53239665-53239684 None:intergenic 40.0%
CAAGTCTTAATCCGCTAAGT+GGG - chr8_1:53239666-53239685 None:intergenic 40.0%
!!! AGCGGATTAAGACTTGGTTT+TGG + chr8_1:53239670-53239689 Msa1200550:intron 40.0%
!! TTGGTTTGTACATGTGAGAG+GGG - chr8_1:53239938-53239957 None:intergenic 40.0%
!! CTTTGGTTTGTACATGTGAG+AGG - chr8_1:53239940-53239959 None:intergenic 40.0%
CTCTCACATGTACAAACCAA+AGG + chr8_1:53239938-53239957 Msa1200550:intron 40.0%
! CCCTTTCACCTCTCATATTT+TGG + chr8_1:53239994-53240013 Msa1200550:intron 40.0%
TTTAAATTTGGGAGCAGCAC+TGG - chr8_1:53240203-53240222 None:intergenic 40.0%
GAAATAGTTATAAGGGCCGT+TGG + chr8_1:53240561-53240580 Msa1200550:intron 40.0%
CGTGAGAGAGAGTAATATGT+TGG + chr8_1:53240609-53240628 Msa1200550:intron 40.0%
TATCGCAAGAATCTCTGGAT+CGG - chr8_1:53240667-53240686 None:intergenic 40.0%
ACAGGAACAATTTCAACCCA+TGG - chr8_1:53240794-53240813 None:intergenic 40.0%
TAGGCCATATCTAGTGTGAA+TGG - chr8_1:53240835-53240854 None:intergenic 40.0%
TCAAGGTTCAAAGGTCTAAC+CGG - chr8_1:53240894-53240913 None:intergenic 40.0%
!! ACCTACATCGGTTTAATGTG+TGG + chr8_1:53240919-53240938 Msa1200550:intron 40.0%
ACCACACATTAAACCGATGT+AGG - chr8_1:53240923-53240942 None:intergenic 40.0%
TGAATGCAAGTGTTATGCCA+AGG - chr8_1:53240984-53241003 None:intergenic 40.0%
! AATTCTCTCCGGTGTCAATT+TGG + chr8_1:53241135-53241154 Msa1200550:intron 40.0%
! ATTCTCTCCGGTGTCAATTT+GGG + chr8_1:53241136-53241155 Msa1200550:intron 40.0%
CTCACTACATGAGTGAAAAG+AGG + chr8_1:53241293-53241312 Msa1200550:CDS 40.0%
AATGTCAGAAACTCCCAATG+AGG + chr8_1:53241339-53241358 Msa1200550:CDS 40.0%
AGTGAGACTGCATATCCAAA+TGG - chr8_1:53241528-53241547 None:intergenic 40.0%
! AGAGGATGAGTTCCTTTTGT+GGG + chr8_1:53241660-53241679 Msa1200550:CDS 40.0%
GTCTATACAGAAAAGAGGGA+TGG + chr8_1:53241756-53241775 Msa1200550:CDS 40.0%
AGGGATGGGTAACTTTATTG+TGG + chr8_1:53241771-53241790 Msa1200550:CDS 40.0%
GGGATGGGTAACTTTATTGT+GGG + chr8_1:53241772-53241791 Msa1200550:CDS 40.0%
ATGGGTAACTTTATTGTGGG+AGG + chr8_1:53241775-53241794 Msa1200550:CDS 40.0%
! TGTGGAGTATTCCCTTGAAA+TGG + chr8_1:53241850-53241869 Msa1200550:CDS 40.0%
GCAAAGAGAAGTTGTACACA+AGG + chr8_1:53241943-53241962 Msa1200550:CDS 40.0%
AAGAGAAGTTGTACACAAGG+AGG + chr8_1:53241946-53241965 Msa1200550:CDS 40.0%
! CTCAAGCTGAACTGATTCAT+CGG - chr8_1:53242041-53242060 None:intergenic 40.0%
TGATCGATCTCAACAGTAAG+GGG - chr8_1:53242178-53242197 None:intergenic 40.0%
TACAAGAAGATCGGTTGAAC+TGG - chr8_1:53242210-53242229 None:intergenic 40.0%
TCGTAGTTTCTATTTAGGGG+TGG + chr8_1:53242443-53242462 Msa1200550:intron 40.0%
CGTAGTTTCTATTTAGGGGT+GGG + chr8_1:53242444-53242463 Msa1200550:intron 40.0%
TTCTATTTAGGGGTGGGAAT+AGG + chr8_1:53242450-53242469 Msa1200550:intron 40.0%
TTAAACAAAATTGGCAGGCC+AGG - chr8_1:53242507-53242526 None:intergenic 40.0%
! GGCTTAAGAGGCTTTTTGAA+TGG + chr8_1:53242931-53242950 Msa1200550:intron 40.0%
AATAAGGATGGGAATAGGCT+AGG - chr8_1:53243074-53243093 None:intergenic 40.0%
TAAAGAATAGAAGCTCGGGA+CGG - chr8_1:53243116-53243135 None:intergenic 40.0%
!!! GATGCAGTTCTTGTTTTCTC+TGG + chr8_1:53243511-53243530 Msa1200550:CDS 40.0%
TTTCCTGGTACCTGTAACAT+TGG + chr8_1:53243618-53243637 Msa1200550:CDS 40.0%
GATCAATCTTGTGGATGTGA+AGG + chr8_1:53243678-53243697 Msa1200550:CDS 40.0%
TGATGGCTGTCCATAGAATA+TGG - chr8_1:53243736-53243755 None:intergenic 40.0%
!! AAAGCATGATGGGTTTAGGT+CGG - chr8_1:53243915-53243934 None:intergenic 40.0%
!! ACGTAAAGCATGATGGGTTT+AGG - chr8_1:53243919-53243938 None:intergenic 40.0%
TTGGGTTATACTCCAAATGG+TGG + chr8_1:53243943-53243962 Msa1200550:CDS 40.0%
GCATTTGATTCACCACCATT+TGG - chr8_1:53243958-53243977 None:intergenic 40.0%
TGGTGAATCAAATGCACAGA+TGG + chr8_1:53243963-53243982 Msa1200550:CDS 40.0%
TGAATGGCATCAAGTAATGG+TGG - chr8_1:53244041-53244060 None:intergenic 40.0%
GTCTGAATGGCATCAAGTAA+TGG - chr8_1:53244044-53244063 None:intergenic 40.0%
!!! AGCACAGTTTTTTGGTTCGA+GGG - chr8_1:53244156-53244175 None:intergenic 40.0%
ATCCTCTTCCTCTACAGAAA+GGG - chr8_1:53244226-53244245 None:intergenic 40.0%
AGGACGTGTTTCATACAACA+TGG + chr8_1:53244255-53244274 Msa1200550:CDS 40.0%
TAGGAACTGTGTGTTTGAGA+TGG + chr8_1:53244376-53244395 Msa1200550:CDS 40.0%
CTACCACAACATTGTCTTCT+TGG + chr8_1:53244433-53244452 Msa1200550:CDS 40.0%
AACCCAAGAAGACAATGTTG+TGG - chr8_1:53244439-53244458 None:intergenic 40.0%
AAAACTGCCGGATAAGAATG+TGG + chr8_1:53244470-53244489 Msa1200550:CDS 40.0%
GGTAACTCCACATTCTTATC+CGG - chr8_1:53244480-53244499 None:intergenic 40.0%
TCCATACTCACAATCAATGG+CGG - chr8_1:53244501-53244520 None:intergenic 40.0%
ATCTCCCAAGATTGCATAAG+GGG - chr8_1:53244529-53244548 None:intergenic 40.0%
GATCTCCCAAGATTGCATAA+GGG - chr8_1:53244530-53244549 None:intergenic 40.0%
TTTCTTGCAGCAATTGTGTC+TGG - chr8_1:53244581-53244600 None:intergenic 40.0%
ACTGAGTTTGAAGAGTTCGA+AGG - chr8_1:53244783-53244802 None:intergenic 40.0%
!!! TGCGGTTTTGAAATGAGGTT+TGG - chr8_1:53244820-53244839 None:intergenic 40.0%
AAACCTCATTTCAAAACCGC+AGG + chr8_1:53244819-53244838 Msa1200550:CDS 40.0%
!! ACATGGAAAAGCGGATTACA+TGG + chr8_1:53244978-53244997 Msa1200550:three_prime_UTR 40.0%
TGCTATGTCACTAGACATAG+AGG + chr8_1:53245070-53245089 Msa1200550:three_prime_UTR 40.0%
TATGTCACTAGACATAGAGG+AGG + chr8_1:53245073-53245092 Msa1200550:three_prime_UTR 40.0%
!! ATGAAGTGCTTTGAGACAGT+TGG + chr8_1:53245114-53245133 Msa1200550:three_prime_UTR 40.0%
CTAAACCAGCGTACATTTGT+CGG - chr8_1:53245255-53245274 None:intergenic 40.0%
GGAGCTTATTGAGTAGTCTT+AGG + chr8_1:53245331-53245350 Msa1200550:intron 40.0%
ACTGATTGTAATAGGACGAG+AGG + chr8_1:53245435-53245454 Msa1200550:three_prime_UTR 40.0%
GGTGGTGTTCGTAATTCTTC+TGG - chr8_1:53235152-53235171 None:intergenic 45.0%
CAACCTCCCTTCATCGTTAA+CGG + chr8_1:53235338-53235357 Msa1200550:five_prime_UTR 45.0%
ATACCGTTAACGATGAAGGG+AGG - chr8_1:53235344-53235363 None:intergenic 45.0%
AAAAGCGAAGCAACAACGGA+AGG - chr8_1:53235407-53235426 None:intergenic 45.0%
CGGAAAAAGCGAAGCAACAA+CGG - chr8_1:53235411-53235430 None:intergenic 45.0%
CAAACTTGAAGCCACTGAGA+AGG - chr8_1:53235455-53235474 None:intergenic 45.0%
GCAGAAATGTTGTTCGTGCA+AGG + chr8_1:53235582-53235601 Msa1200550:intron 45.0%
ATGTGTCAGTGTCGTGTCAT+CGG - chr8_1:53235743-53235762 None:intergenic 45.0%
! CAGGCTGGCGAATATCTTTT+CGG + chr8_1:53236189-53236208 Msa1200550:intron 45.0%
AAGGAAGGAGGGTTAAACAG+AGG + chr8_1:53236239-53236258 Msa1200550:five_prime_UTR 45.0%
GTCATTGCTGTGTTCGATGT+TGG - chr8_1:53236412-53236431 None:intergenic 45.0%
ATTGCCACTGACACAACAAC+TGG - chr8_1:53236465-53236484 None:intergenic 45.0%
AAGGACCCTTGAGAAGGATT+AGG + chr8_1:53236795-53236814 Msa1200550:intron 45.0%
AGGACCCTTGAGAAGGATTA+GGG + chr8_1:53236796-53236815 Msa1200550:intron 45.0%
CAGTCCCTAATCCTTCTCAA+GGG - chr8_1:53236803-53236822 None:intergenic 45.0%
TCAGTCCCTAATCCTTCTCA+AGG - chr8_1:53236804-53236823 None:intergenic 45.0%
AGGTCATAGGAGAGACAGTA+TGG - chr8_1:53237344-53237363 None:intergenic 45.0%
AGATTGTTGGGGTGACAACA+AGG + chr8_1:53237482-53237501 Msa1200550:intron 45.0%
! TCAACTAAGCGTTGTACAGC+TGG - chr8_1:53237511-53237530 None:intergenic 45.0%
AGGTTACAGAAGCAGTGACA+TGG + chr8_1:53237593-53237612 Msa1200550:CDS 45.0%
CATCTAAACCACTGTCAGAG+TGG + chr8_1:53237776-53237795 Msa1200550:CDS 45.0%
TAGTATTCCCACTCTGACAG+TGG - chr8_1:53237787-53237806 None:intergenic 45.0%
GTTTAGAAAGGCAAACGGCT+AGG + chr8_1:53237869-53237888 Msa1200550:intron 45.0%
!! TTCTTGCATGGTGTCACCAT+TGG + chr8_1:53237979-53237998 Msa1200550:intron 45.0%
TGAAACCCTCCCAAAATACG+GGG + chr8_1:53238357-53238376 Msa1200550:intron 45.0%
!!! TTTTAGAGCGCCCCCAATTT+TGG + chr8_1:53238429-53238448 Msa1200550:intron 45.0%
!! TTTAGAGCGCCCCCAATTTT+GGG + chr8_1:53238430-53238449 Msa1200550:intron 45.0%
TGACCACCGTAACTACTTGT+TGG + chr8_1:53239074-53239093 Msa1200550:intron 45.0%
GAACCAACAAGTAGTTACGG+TGG - chr8_1:53239080-53239099 None:intergenic 45.0%
TATGGGTGAGGAATGAGGAT+GGG - chr8_1:53239102-53239121 None:intergenic 45.0%
ATATGGGTGAGGAATGAGGA+TGG - chr8_1:53239103-53239122 None:intergenic 45.0%
CAACATATGGGTGAGGAATG+AGG - chr8_1:53239107-53239126 None:intergenic 45.0%
CTCATTCCTCACCCATATGT+TGG + chr8_1:53239105-53239124 Msa1200550:intron 45.0%
AAGCTAGGTGGTTGAAATGG+AGG + chr8_1:53239183-53239202 Msa1200550:intron 45.0%
AGGCACAATGCTGTGCTATA+AGG + chr8_1:53239279-53239298 Msa1200550:intron 45.0%
CACAGATGAGGATGTTGTGT+TGG + chr8_1:53239330-53239349 Msa1200550:intron 45.0%
AGGATGTTGTGTTGGATGTG+TGG + chr8_1:53239338-53239357 Msa1200550:intron 45.0%
GTGGTTAGACTAGACACGAT+AGG + chr8_1:53239357-53239376 Msa1200550:intron 45.0%
!! AGATGGTGGAAACTAGGCTT+AGG + chr8_1:53239430-53239449 Msa1200550:intron 45.0%
GAAACTAGGCTTAGGTGGTT+TGG + chr8_1:53239438-53239457 Msa1200550:intron 45.0%
CCAAGTCTTAATCCGCTAAG+TGG - chr8_1:53239667-53239686 None:intergenic 45.0%
!! CCACTTAGCGGATTAAGACT+TGG + chr8_1:53239664-53239683 Msa1200550:intron 45.0%
GGAAAAATGATGTTGGCAGC+AGG - chr8_1:53239863-53239882 None:intergenic 45.0%
AGTGGGTACTTGATAGATGC+TGG - chr8_1:53239884-53239903 None:intergenic 45.0%
AGCATCTATCAAGTACCCAC+TGG + chr8_1:53239883-53239902 Msa1200550:intron 45.0%
ATGTGAGAGGGGTTACACAA+TGG - chr8_1:53239927-53239946 None:intergenic 45.0%
AGCCTGACTGTACACCTTAT+TGG + chr8_1:53240358-53240377 Msa1200550:intron 45.0%
CTCCAATAAGGTGTACAGTC+AGG - chr8_1:53240363-53240382 None:intergenic 45.0%
CTGACTGTACACCTTATTGG+AGG + chr8_1:53240361-53240380 Msa1200550:intron 45.0%
TGATCCTCCAGCATCAACTA+CGG - chr8_1:53240635-53240654 None:intergenic 45.0%
AAATGGTGCACAGGAGTAGT+GGG + chr8_1:53240700-53240719 Msa1200550:intron 45.0%
AAGGTTCAAAGGTCTAACCG+GGG - chr8_1:53240892-53240911 None:intergenic 45.0%
CAAGGTTCAAAGGTCTAACC+GGG - chr8_1:53240893-53240912 None:intergenic 45.0%
AGGTCCGATTCAAGGTTCAA+AGG - chr8_1:53240903-53240922 None:intergenic 45.0%
ACCTTGAATCGGACCTACAT+CGG + chr8_1:53240907-53240926 Msa1200550:intron 45.0%
GTCTTTAAACCCACTTGGGT+TGG + chr8_1:53241056-53241075 Msa1200550:intron 45.0%
GAATTGAACCTGAGACCTCA+AGG - chr8_1:53241120-53241139 None:intergenic 45.0%
GTCTCAGGTTCAATTCTCTC+CGG + chr8_1:53241124-53241143 Msa1200550:intron 45.0%
GTTGTTCCTTCTGCGTATGT+CGG + chr8_1:53241382-53241401 Msa1200550:CDS 45.0%
! TCAGTTTGCTCGGTTACTTG+AGG + chr8_1:53241405-53241424 Msa1200550:CDS 45.0%
TTTGCTCGGTTACTTGAGGA+AGG + chr8_1:53241409-53241428 Msa1200550:CDS 45.0%
TTGCTCGGTTACTTGAGGAA+GGG + chr8_1:53241410-53241429 Msa1200550:CDS 45.0%
! CAGAGGATGAGTTCCTTTTG+TGG + chr8_1:53241659-53241678 Msa1200550:CDS 45.0%
! TTCCTTTTGTGGGTTCCAGA+TGG + chr8_1:53241670-53241689 Msa1200550:CDS 45.0%
AACTTTATTGTGGGAGGTCC+TGG + chr8_1:53241781-53241800 Msa1200550:CDS 45.0%
ACTTTATTGTGGGAGGTCCT+GGG + chr8_1:53241782-53241801 Msa1200550:CDS 45.0%
CTCCCAATATCATCCGATAC+CGG + chr8_1:53241878-53241897 Msa1200550:CDS 45.0%
! CACCGGTATCGGATGATATT+GGG - chr8_1:53241883-53241902 None:intergenic 45.0%
! ACACCGGTATCGGATGATAT+TGG - chr8_1:53241884-53241903 None:intergenic 45.0%
TCTCTTTGCCGTAGATTTGC+CGG - chr8_1:53241932-53241951 None:intergenic 45.0%
CGATGAATCAGTTCAGCTTG+AGG + chr8_1:53242039-53242058 Msa1200550:CDS 45.0%
CAGGCTTGATTGTCTGTTCA+TGG - chr8_1:53242114-53242133 None:intergenic 45.0%
CATGAACAGACAATCAAGCC+TGG + chr8_1:53242112-53242131 Msa1200550:CDS 45.0%
GTTATCAAAGTTGAGGCTCC+AGG - chr8_1:53242133-53242152 None:intergenic 45.0%
GGGTATCTGACTTACCAGAT+TGG - chr8_1:53242360-53242379 None:intergenic 45.0%
GTAAGTCAGATACCCTTGAC+AGG + chr8_1:53242365-53242384 Msa1200550:intron 45.0%
GTGCTGGATAAACCTGTCAA+GGG - chr8_1:53242380-53242399 None:intergenic 45.0%
TGTGCTGGATAAACCTGTCA+AGG - chr8_1:53242381-53242400 None:intergenic 45.0%
CAGGCTCAGGCATAAAAAGT+AGG - chr8_1:53242560-53242579 None:intergenic 45.0%
!!! CTACTTTTTATGCCTGAGCC+TGG + chr8_1:53242558-53242577 Msa1200550:intron 45.0%
TATCATGCTTTCAGAAGGCC+AGG - chr8_1:53242579-53242598 None:intergenic 45.0%
! GGCCTTCTGAAAGCATGATA+CGG + chr8_1:53242579-53242598 Msa1200550:intron 45.0%
CTTAAATAGGCCGGCCTAAT+AGG + chr8_1:53242910-53242929 Msa1200550:intron 45.0%
! TTTTTGAATGGCCTGTGGTC+TGG + chr8_1:53242943-53242962 Msa1200550:intron 45.0%
AAAGAATAGAAGCTCGGGAC+GGG - chr8_1:53243115-53243134 None:intergenic 45.0%
! TAGATGTGCATGTGTCGATG+TGG - chr8_1:53243271-53243290 None:intergenic 45.0%
AGCTGAAAGTCCTACTTCAC+TGG + chr8_1:53243435-53243454 Msa1200550:CDS 45.0%
GGTAAGCTATCCAGTGAAGT+AGG - chr8_1:53243448-53243467 None:intergenic 45.0%
TAGCTTACCTCTCTGGACAT+TGG + chr8_1:53243459-53243478 Msa1200550:CDS 45.0%
CTTCCACTTGAGTAGACTTC+TGG - chr8_1:53243537-53243556 None:intergenic 45.0%
AGACCAATGTTACAGGTACC+AGG - chr8_1:53243624-53243643 None:intergenic 45.0%
! CCTTTGGAGACCAATGTTAC+AGG - chr8_1:53243631-53243650 None:intergenic 45.0%
! CCTGTAACATTGGTCTCCAA+AGG + chr8_1:53243628-53243647 Msa1200550:CDS 45.0%
AAAGGCCATGATGTCTACTC+CGG + chr8_1:53243646-53243665 Msa1200550:CDS 45.0%
ATTCACCGGAGTAGACATCA+TGG - chr8_1:53243654-53243673 None:intergenic 45.0%
AATCTTGTGGATGTGAAGGG+AGG + chr8_1:53243682-53243701 Msa1200550:CDS 45.0%
AGACTCCGAGCCATATTCTA+TGG + chr8_1:53243723-53243742 Msa1200550:CDS 45.0%
GCTGTCCATAGAATATGGCT+CGG - chr8_1:53243731-53243750 None:intergenic 45.0%
TGGGTATATCTGGACCAGAA+GGG + chr8_1:53243767-53243786 Msa1200550:CDS 45.0%
AACAATGGGTCTCGTCTGAA+TGG - chr8_1:53244057-53244076 None:intergenic 45.0%
CACTAAGAACAAGCAAGCCT+CGG + chr8_1:53244080-53244099 Msa1200550:CDS 45.0%
! TTCTGGTTGATCAGACTCTG+AGG - chr8_1:53244127-53244146 None:intergenic 45.0%
!!! GAGCACAGTTTTTTGGTTCG+AGG - chr8_1:53244157-53244176 None:intergenic 45.0%
GAAAGGGACTTCAACCTTAG+TGG - chr8_1:53244210-53244229 None:intergenic 45.0%
GTTGAAGTCCCTTTCTGTAG+AGG + chr8_1:53244215-53244234 Msa1200550:CDS 45.0%
CATCCTCTTCCTCTACAGAA+AGG - chr8_1:53244227-53244246 None:intergenic 45.0%
CTTTCTGTAGAGGAAGAGGA+TGG + chr8_1:53244225-53244244 Msa1200550:CDS 45.0%
! AGGAAGAGGATGGTGTTGAA+AGG + chr8_1:53244235-53244254 Msa1200550:CDS 45.0%
ACTTTCTTGAACTCTTCCCC+TGG - chr8_1:53244315-53244334 None:intergenic 45.0%
! GAACTGTGTGTTTGAGATGG+AGG + chr8_1:53244379-53244398 Msa1200550:CDS 45.0%
! TGTGTGTTTGAGATGGAGGA+GGG + chr8_1:53244383-53244402 Msa1200550:CDS 45.0%
! ACCGCCATTGATTGTGAGTA+TGG + chr8_1:53244497-53244516 Msa1200550:CDS 45.0%
ATGTCCCCCTTATGCAATCT+TGG + chr8_1:53244521-53244540 Msa1200550:CDS 45.0%
TGTCCCCCTTATGCAATCTT+GGG + chr8_1:53244522-53244541 Msa1200550:CDS 45.0%
TCTCCCAAGATTGCATAAGG+GGG - chr8_1:53244528-53244547 None:intergenic 45.0%
GGATCTCCCAAGATTGCATA+AGG - chr8_1:53244531-53244550 None:intergenic 45.0%
ATATCTCAACCCCTGCAGAT+CGG - chr8_1:53245202-53245221 None:intergenic 45.0%
!! TGTACGCTGGTTTAGTGCAA+TGG + chr8_1:53245260-53245279 Msa1200550:three_prime_UTR 45.0%
!! GTACGCTGGTTTAGTGCAAT+GGG + chr8_1:53245261-53245280 Msa1200550:three_prime_UTR 45.0%
GAAGAATTGTGAGCGAGTCT+CGG + chr8_1:53245310-53245329 Msa1200550:three_prime_UTR 45.0%
AGGGAGGTTAGGGTTATTGG+TGG - chr8_1:53235170-53235189 None:intergenic 50.0%
ACCAATAACCCTAACCTCCC+TGG + chr8_1:53235169-53235188 Msa1200550:five_prime_UTR 50.0%
ACCAGGGAGGTTAGGGTTAT+TGG - chr8_1:53235173-53235192 None:intergenic 50.0%
ATAACCCTAACCTCCCTGGT+AGG + chr8_1:53235173-53235192 Msa1200550:five_prime_UTR 50.0%
ACAACCTACCAGGGAGGTTA+GGG - chr8_1:53235180-53235199 None:intergenic 50.0%
AAGATCGGGACAACCTACCA+GGG - chr8_1:53235189-53235208 None:intergenic 50.0%
CAACGTGTGAATGTCGTGTC+TGG + chr8_1:53235885-53235904 Msa1200550:intron 50.0%
GATTGCATTACGGAAGCGAG+CGG + chr8_1:53236017-53236036 Msa1200550:five_prime_UTR 50.0%
CACCTCTCGCAGTGTATGAT+AGG - chr8_1:53237048-53237067 None:intergenic 50.0%
! GAAGTGCCTTGTGTGTTGTG+AGG + chr8_1:53237235-53237254 Msa1200550:intron 50.0%
!! TTAGAGCGCCCCCAATTTTG+GGG + chr8_1:53238431-53238450 Msa1200550:intron 50.0%
TCCAACGTCCCCAAAATTGG+GGG - chr8_1:53238442-53238461 None:intergenic 50.0%
CTCCAACGTCCCCAAAATTG+GGG - chr8_1:53238443-53238462 None:intergenic 50.0%
CCTCCAACGTCCCCAAAATT+GGG - chr8_1:53238444-53238463 None:intergenic 50.0%
TCCTCCAACGTCCCCAAAAT+TGG - chr8_1:53238445-53238464 None:intergenic 50.0%
GAGACAGTGTTCAAGCTAGG+TGG + chr8_1:53238999-53239018 Msa1200550:intron 50.0%
CAACTGCGTGGCTCACAATA+GGG - chr8_1:53239056-53239075 None:intergenic 50.0%
TCAACTGCGTGGCTCACAAT+AGG - chr8_1:53239057-53239076 None:intergenic 50.0%
ATGGACCCAACATATGGGTG+AGG - chr8_1:53239114-53239133 None:intergenic 50.0%
CTAGGTGGTTGAAATGGAGG+AGG + chr8_1:53239186-53239205 Msa1200550:intron 50.0%
TGGTGGAAACTAGGCTTAGG+TGG + chr8_1:53239433-53239452 Msa1200550:intron 50.0%
ATGTAGCTGACCCCACTTAG+CGG + chr8_1:53239652-53239671 Msa1200550:intron 50.0%
! TGTTGGCAGCAGGTTGAAGA+TGG - chr8_1:53239853-53239872 None:intergenic 50.0%
! CACTGGTTATACTGCCGGTT+GGG - chr8_1:53240186-53240205 None:intergenic 50.0%
!! AGCAGCACTGGTTATACTGC+CGG - chr8_1:53240191-53240210 None:intergenic 50.0%
! ATGTTGGCCGTAGTTGATGC+TGG + chr8_1:53240625-53240644 Msa1200550:intron 50.0%
AGAGGATGCAAATGGTGCAC+AGG + chr8_1:53240691-53240710 Msa1200550:intron 50.0%
CAAATGGTGCACAGGAGTAG+TGG + chr8_1:53240699-53240718 Msa1200550:intron 50.0%
AGGTTCAAAGGTCTAACCGG+GGG - chr8_1:53240891-53240910 None:intergenic 50.0%
ACCGATGTAGGTCCGATTCA+AGG - chr8_1:53240911-53240930 None:intergenic 50.0%
AAGGCAGAGCAACCCACATA+CGG - chr8_1:53240965-53240984 None:intergenic 50.0%
TTGAACCTGAGACCTCAAGG+AGG - chr8_1:53241117-53241136 None:intergenic 50.0%
! TCTCCGGTGTCAATTTGGGT+GGG + chr8_1:53241140-53241159 Msa1200550:intron 50.0%
TAGCCCACCCAAATTGACAC+CGG - chr8_1:53241146-53241165 None:intergenic 50.0%
GAGTGAAAAGAGGTCAGCAC+TGG + chr8_1:53241303-53241322 Msa1200550:CDS 50.0%
ACTCCCAATGAGGTTGACAG+CGG + chr8_1:53241349-53241368 Msa1200550:CDS 50.0%
AACTGACCGACATACGCAGA+AGG - chr8_1:53241391-53241410 None:intergenic 50.0%
! CGTATGTCGGTCAGTTTGCT+CGG + chr8_1:53241395-53241414 Msa1200550:CDS 50.0%
TGCTCGGTTACTTGAGGAAG+GGG + chr8_1:53241411-53241430 Msa1200550:CDS 50.0%
!! CGAGAGTGCTCACGGAAAAA+TGG + chr8_1:53241812-53241831 Msa1200550:CDS 50.0%
! TGGGAGTGCAGCCATTTCAA+GGG - chr8_1:53241864-53241883 None:intergenic 50.0%
! TTGGGAGTGCAGCCATTTCA+AGG - chr8_1:53241865-53241884 None:intergenic 50.0%
TTGATCTTGTCAGTCCGCTC+AGG + chr8_1:53242062-53242081 Msa1200550:CDS 50.0%
ACAAGCATGACCAACCTGAG+CGG - chr8_1:53242079-53242098 None:intergenic 50.0%
CTCAACAGTAAGGGGTAGGT+GGG - chr8_1:53242170-53242189 None:intergenic 50.0%
TCTCAACAGTAAGGGGTAGG+TGG - chr8_1:53242171-53242190 None:intergenic 50.0%
CGATCTCAACAGTAAGGGGT+AGG - chr8_1:53242174-53242193 None:intergenic 50.0%
TTTAGGGGTGGGAATAGGCT+AGG + chr8_1:53242455-53242474 Msa1200550:intron 50.0%
! AGGCCTTGTAAAGCCTAGCT+CGG - chr8_1:53242481-53242500 None:intergenic 50.0%
AAAATTGGCAGGCCAGGCTT+AGG - chr8_1:53242501-53242520 None:intergenic 50.0%
GGCCGTATCATGCTTTCAGA+AGG - chr8_1:53242584-53242603 None:intergenic 50.0%
! AGGCTTTTAACCAGGCTAGC+AGG - chr8_1:53242605-53242624 None:intergenic 50.0%
GCCTCTTAAGCCTATTAGGC+CGG - chr8_1:53242923-53242942 None:intergenic 50.0%
! GAGGCTTTTTGAATGGCCTG+TGG + chr8_1:53242938-53242957 Msa1200550:intron 50.0%
AGCTTAAAAGGCCAGACCAC+AGG - chr8_1:53242957-53242976 None:intergenic 50.0%
AAGAATAGAAGCTCGGGACG+GGG - chr8_1:53243114-53243133 None:intergenic 50.0%
CACTGGATAGCTTACCTCTC+TGG + chr8_1:53243452-53243471 Msa1200550:CDS 50.0%
CTTACCTCTCTGGACATTGG+AGG + chr8_1:53243462-53243481 Msa1200550:CDS 50.0%
CAATCCTCCAATGTCCAGAG+AGG - chr8_1:53243469-53243488 None:intergenic 50.0%
TGGCCAGAAGTCTACTCAAG+TGG + chr8_1:53243531-53243550 Msa1200550:CDS 50.0%
AGTGGAAGAACCAGATCCAC+AGG + chr8_1:53243549-53243568 Msa1200550:CDS 50.0%
CACAGATCTACCTGTGGATC+TGG - chr8_1:53243562-53243581 None:intergenic 50.0%
CCAAGACACAGATCTACCTG+TGG - chr8_1:53243568-53243587 None:intergenic 50.0%
CCACAGGTAGATCTGTGTCT+TGG + chr8_1:53243565-53243584 Msa1200550:CDS 50.0%
GGAGTAGACATCATGGCCTT+TGG - chr8_1:53243647-53243666 None:intergenic 50.0%
! GAATATGGCTCGGAGTCTCT+TGG - chr8_1:53243721-53243740 None:intergenic 50.0%
AGCCATCATGTTCAGCTGCT+GGG + chr8_1:53243748-53243767 Msa1200550:CDS 50.0%
TACCCAGCAGCTGAACATGA+TGG - chr8_1:53243753-53243772 None:intergenic 50.0%
GTTCAGCTGCTGGGTATATC+TGG + chr8_1:53243757-53243776 Msa1200550:CDS 50.0%
CTGGGTATATCTGGACCAGA+AGG + chr8_1:53243766-53243785 Msa1200550:CDS 50.0%
GGGTATATCTGGACCAGAAG+GGG + chr8_1:53243768-53243787 Msa1200550:CDS 50.0%
TGAGAATCGTCTTCCCCTTC+TGG - chr8_1:53243784-53243803 None:intergenic 50.0%
CTTGTTCTGTTCAGAGTCCG+AGG - chr8_1:53244100-53244119 None:intergenic 50.0%
TAGTGCGAAGAACTGCACTG+AGG + chr8_1:53244182-53244201 Msa1200550:CDS 50.0%
ACTGCACTGAGGTTCCACTA+AGG + chr8_1:53244193-53244212 Msa1200550:CDS 50.0%
GTCCCTTTCTGTAGAGGAAG+AGG + chr8_1:53244221-53244240 Msa1200550:CDS 50.0%
AAACCCGCACTTCTTGTTCC+AGG + chr8_1:53244294-53244313 Msa1200550:CDS 50.0%
AACCCGCACTTCTTGTTCCA+GGG + chr8_1:53244295-53244314 Msa1200550:CDS 50.0%
TTCCCCTGGAACAAGAAGTG+CGG - chr8_1:53244301-53244320 None:intergenic 50.0%
! CTGTGTGTTTGAGATGGAGG+AGG + chr8_1:53244382-53244401 Msa1200550:CDS 50.0%
! TTTGAGATGGAGGAGGGACT+TGG + chr8_1:53244389-53244408 Msa1200550:CDS 50.0%
TTGAGATGGAGGAGGGACTT+GGG + chr8_1:53244390-53244409 Msa1200550:CDS 50.0%
AAACTTGTCCCACTTGCCTC+AGG + chr8_1:53244699-53244718 Msa1200550:CDS 50.0%
AGGTAACTGTTGCATGCCTG+AGG - chr8_1:53244718-53244737 None:intergenic 50.0%
!!! GAGCCTGCGGTTTTGAAATG+AGG - chr8_1:53244825-53244844 None:intergenic 50.0%
CCTAAAACTTGTGGAGCCTG+CGG - chr8_1:53244838-53244857 None:intergenic 50.0%
! CGCAGGCTCCACAAGTTTTA+GGG + chr8_1:53244836-53244855 Msa1200550:CDS 50.0%
!!! AGGCTCCACAAGTTTTAGGG+TGG + chr8_1:53244839-53244858 Msa1200550:CDS 50.0%
!!! CTCCACAAGTTTTAGGGTGG+AGG + chr8_1:53244842-53244861 Msa1200550:CDS 50.0%
CTCCTCCACCCTAAAACTTG+TGG - chr8_1:53244847-53244866 None:intergenic 50.0%
ACTTCACCATACTCATGGGC+CGG + chr8_1:53244940-53244959 Msa1200550:three_prime_UTR 50.0%
ACTTCATCATCTTCGGCGAC+TGG - chr8_1:53245101-53245120 None:intergenic 50.0%
GTCTACCCTTTCAACGACTG+CGG + chr8_1:53245147-53245166 Msa1200550:three_prime_UTR 50.0%
TCTACCCTTTCAACGACTGC+GGG + chr8_1:53245148-53245167 Msa1200550:three_prime_UTR 50.0%
GTATCACACTGAGCAACCCT+AGG - chr8_1:53245179-53245198 None:intergenic 50.0%
AGTGTGATACCCGATCTGCA+GGG + chr8_1:53245189-53245208 Msa1200550:three_prime_UTR 50.0%
TATCTCAACCCCTGCAGATC+GGG - chr8_1:53245201-53245220 None:intergenic 50.0%
GTTAGCCGACAAATGTACGC+TGG + chr8_1:53245247-53245266 Msa1200550:three_prime_UTR 50.0%
GACAACCTACCAGGGAGGTT+AGG - chr8_1:53235181-53235200 None:intergenic 55.0%
GAAGATCGGGACAACCTACC+AGG - chr8_1:53235190-53235209 None:intergenic 55.0%
GCTGTGTTCGATGTTGGACG+TGG - chr8_1:53236406-53236425 None:intergenic 55.0%
GGCCTATCATACACTGCGAG+AGG + chr8_1:53237043-53237062 Msa1200550:CDS 55.0%
ACCCTCCCAAAATACGGGGA+AGG + chr8_1:53238361-53238380 Msa1200550:intron 55.0%
!! CCCTTCCCCGTATTTTGGGA+GGG - chr8_1:53238365-53238384 None:intergenic 55.0%
CCCTCCCAAAATACGGGGAA+GGG + chr8_1:53238362-53238381 Msa1200550:intron 55.0%
!! TCCCTTCCCCGTATTTTGGG+AGG - chr8_1:53238366-53238385 None:intergenic 55.0%
!! CCCAATTTTGGGGACGTTGG+AGG + chr8_1:53238441-53238460 Msa1200550:intron 55.0%
AGTTACGGTGGTCAACTGCG+TGG - chr8_1:53239068-53239087 None:intergenic 55.0%
GCTAAGTGGGGTCAGCTACA+TGG - chr8_1:53239653-53239672 None:intergenic 55.0%
TGAAAGGGGTTCGAAGGAGG+GGG - chr8_1:53239982-53240001 None:intergenic 55.0%
GTGAAAGGGGTTCGAAGGAG+GGG - chr8_1:53239983-53240002 None:intergenic 55.0%
GGTGAAAGGGGTTCGAAGGA+GGG - chr8_1:53239984-53240003 None:intergenic 55.0%
AGGTGAAAGGGGTTCGAAGG+AGG - chr8_1:53239985-53240004 None:intergenic 55.0%
GAGAGGTGAAAGGGGTTCGA+AGG - chr8_1:53239988-53240007 None:intergenic 55.0%
!! GCACTGGTTATACTGCCGGT+TGG - chr8_1:53240187-53240206 None:intergenic 55.0%
! TTGGCCGTAGTTGATGCTGG+AGG + chr8_1:53240628-53240647 Msa1200550:intron 55.0%
ACTATTACTGGTCCGACCCC+CGG + chr8_1:53240872-53240891 Msa1200550:intron 55.0%
TCAAAGGTCTAACCGGGGGT+CGG - chr8_1:53240887-53240906 None:intergenic 55.0%
! GTATGTGGGTTGCTCTGCCT+TGG + chr8_1:53240964-53240983 Msa1200550:intron 55.0%
!! TAAACCCACTTGGGTTGGCC+TGG + chr8_1:53241061-53241080 Msa1200550:intron 55.0%
!! TTGGGTTGGCCTGGTGGTAT+TGG + chr8_1:53241070-53241089 Msa1200550:intron 55.0%
!! TTGGCCTGGTGGTATTGGCT+TGG + chr8_1:53241075-53241094 Msa1200550:intron 55.0%
!! TGGCCTGGTGGTATTGGCTT+GGG + chr8_1:53241076-53241095 Msa1200550:intron 55.0%
!! GTGGTATTGGCTTGGGACCT+AGG + chr8_1:53241083-53241102 Msa1200550:intron 55.0%
! TCAAGGAGGAGCACACTCCT+AGG - chr8_1:53241103-53241122 None:intergenic 55.0%
! TAGGAGTGTGCTCCTCCTTG+AGG + chr8_1:53241102-53241121 Msa1200550:intron 55.0%
! CTCTCCGGTGTCAATTTGGG+TGG + chr8_1:53241139-53241158 Msa1200550:intron 55.0%
GCACCGCTGTCAACCTCATT+GGG - chr8_1:53241355-53241374 None:intergenic 55.0%
AGCACCGCTGTCAACCTCAT+TGG - chr8_1:53241356-53241375 None:intergenic 55.0%
! GGCCATCTGGAACCCACAAA+AGG - chr8_1:53241675-53241694 None:intergenic 55.0%
!! GTTACCTGCGAGAGTGCTCA+CGG + chr8_1:53241804-53241823 Msa1200550:CDS 55.0%
! TTTTCCGTGAGCACTCTCGC+AGG - chr8_1:53241811-53241830 None:intergenic 55.0%
GTCTCTCTGGACACCGGTAT+CGG - chr8_1:53241894-53241913 None:intergenic 55.0%
ACCAGTGTCTCTCTGGACAC+CGG - chr8_1:53241900-53241919 None:intergenic 55.0%
CAGCTGGTCCGGCAAATCTA+CGG + chr8_1:53241921-53241940 Msa1200550:CDS 55.0%
TCTTGTCAGTCCGCTCAGGT+TGG + chr8_1:53242066-53242085 Msa1200550:CDS 55.0%
AGGCCGAGCTAGGCTTTACA+AGG + chr8_1:53242475-53242494 Msa1200550:intron 55.0%
GGCTTTACAAGGCCTAAGCC+TGG + chr8_1:53242486-53242505 Msa1200550:intron 55.0%
GCTGACCTGCAACCTGTCAT+AGG + chr8_1:53242534-53242553 Msa1200550:intron 55.0%
GTAGGCCTATGACAGGTTGC+AGG - chr8_1:53242542-53242561 None:intergenic 55.0%
GCCGGCCTAATAGGCTTAAG+AGG + chr8_1:53242919-53242938 Msa1200550:intron 55.0%
!! AGCTTAGCCTTGCCTGTCGT+AGG + chr8_1:53243022-53243041 Msa1200550:intron 55.0%
AGGATGGGAATAGGCTAGGC+CGG - chr8_1:53243070-53243089 None:intergenic 55.0%
!! GATCTGTGTCTTGGTGCCTC+AGG + chr8_1:53243574-53243593 Msa1200550:CDS 55.0%
AAAACCTCTCCCACTAGCGC+AGG - chr8_1:53243601-53243620 None:intergenic 55.0%
! GCTAGTGGGAGAGGTTTTCC+TGG + chr8_1:53243603-53243622 Msa1200550:CDS 55.0%
CTTGTGGATGTGAAGGGAGG+TGG + chr8_1:53243685-53243704 Msa1200550:CDS 55.0%
CAGCCATCATGTTCAGCTGC+TGG + chr8_1:53243747-53243766 Msa1200550:CDS 55.0%
TGGTTCGAGGGCAGTGATTC+TGG - chr8_1:53244144-53244163 None:intergenic 55.0%
ACCCGCACTTCTTGTTCCAG+GGG + chr8_1:53244296-53244315 Msa1200550:CDS 55.0%
! TCCCCTGGAACAAGAAGTGC+GGG - chr8_1:53244300-53244319 None:intergenic 55.0%
GTTGCATGCCTGAGGCAAGT+GGG - chr8_1:53244710-53244729 None:intergenic 55.0%
TGTTGCATGCCTGAGGCAAG+TGG - chr8_1:53244711-53244730 None:intergenic 55.0%
! CCGCAGGCTCCACAAGTTTT+AGG + chr8_1:53244835-53244854 Msa1200550:CDS 55.0%
CTTCACCATACTCATGGGCC+GGG + chr8_1:53244941-53244960 Msa1200550:three_prime_UTR 55.0%
TGTATCCCGGCCCATGAGTA+TGG - chr8_1:53244949-53244968 None:intergenic 55.0%
TCCTCCCGCAGTCGTTGAAA+GGG - chr8_1:53245155-53245174 None:intergenic 55.0%
CAGTGTGATACCCGATCTGC+AGG + chr8_1:53245188-53245207 Msa1200550:three_prime_UTR 55.0%
GTGTGATACCCGATCTGCAG+GGG + chr8_1:53245190-53245209 Msa1200550:three_prime_UTR 55.0%
ATCGGGACAACCTACCAGGG+AGG - chr8_1:53235186-53235205 None:intergenic 60.0%
! ACACTGCGAGAGGTGCGTGT+AGG + chr8_1:53237053-53237072 Msa1200550:intron 60.0%
!! GCCCCCAATTTTGGGGACGT+TGG + chr8_1:53238438-53238457 Msa1200550:intron 60.0%
GAAAGGGGTTCGAAGGAGGG+GGG - chr8_1:53239981-53240000 None:intergenic 60.0%
ACCACCAGGCCAACCCAAGT+GGG - chr8_1:53241068-53241087 None:intergenic 60.0%
TACCACCAGGCCAACCCAAG+TGG - chr8_1:53241069-53241088 None:intergenic 60.0%
GGTCCCAAGCCAATACCACC+AGG - chr8_1:53241082-53241101 None:intergenic 60.0%
GTGCTCCTCCTTGAGGTCTC+AGG + chr8_1:53241109-53241128 Msa1200550:intron 60.0%
AGCACTCTCGCAGGTAACCC+AGG - chr8_1:53241802-53241821 None:intergenic 60.0%
ACCGGTGTCCAGAGAGACAC+TGG + chr8_1:53241896-53241915 Msa1200550:CDS 60.0%
CAGCTGGACCAGTGTCTCTC+TGG - chr8_1:53241907-53241926 None:intergenic 60.0%
CAGAGAGACACTGGTCCAGC+TGG + chr8_1:53241905-53241924 Msa1200550:CDS 60.0%
AGACACTGGTCCAGCTGGTC+CGG + chr8_1:53241910-53241929 Msa1200550:CDS 60.0%
CGTAGATTTGCCGGACCAGC+TGG - chr8_1:53241923-53241942 None:intergenic 60.0%
GGAATAGGCTAGGCCGAGCT+AGG + chr8_1:53242465-53242484 Msa1200550:intron 60.0%
GCTTTCAGAAGGCCAGGCTC+AGG - chr8_1:53242573-53242592 None:intergenic 60.0%
CATGATACGGCCTGCTAGCC+TGG + chr8_1:53242592-53242611 Msa1200550:intron 60.0%
AGCCTTGCCTGTCGTAGGCT+AGG + chr8_1:53243027-53243046 Msa1200550:intron 60.0%
AGCCTAGCCTACGACAGGCA+AGG - chr8_1:53243032-53243051 None:intergenic 60.0%
CCTACAGCCTAGCCTACGAC+AGG - chr8_1:53243037-53243056 None:intergenic 60.0%
CCTGTCGTAGGCTAGGCTGT+AGG + chr8_1:53243034-53243053 Msa1200550:intron 60.0%
GCTAGGCTGTAGGTCCCTGT+AGG + chr8_1:53243044-53243063 Msa1200550:intron 60.0%
ATAGGCTAGGCCGGCCTACA+GGG - chr8_1:53243061-53243080 None:intergenic 60.0%
AATAGGCTAGGCCGGCCTAC+AGG - chr8_1:53243062-53243081 None:intergenic 60.0%
ACCCTTTCAACGACTGCGGG+AGG + chr8_1:53245151-53245170 Msa1200550:three_prime_UTR 60.0%
CTCCTCCCGCAGTCGTTGAA+AGG - chr8_1:53245156-53245175 None:intergenic 60.0%
!! ACCCACTTGGGTTGGCCTGG+TGG + chr8_1:53241064-53241083 Msa1200550:intron 65.0%
GGCTGTAGGTCCCTGTAGGC+CGG + chr8_1:53243048-53243067 Msa1200550:intron 65.0%
! AAGCTCGGGACGGGGAGCAT+CGG - chr8_1:53243106-53243125 None:intergenic 65.0%
TGCCTCAGGTCCTGCGCTAG+TGG + chr8_1:53243588-53243607 Msa1200550:CDS 65.0%
GCCTCAGGTCCTGCGCTAGT+GGG + chr8_1:53243589-53243608 Msa1200550:CDS 65.0%
TCCCACTAGCGCAGGACCTG+AGG - chr8_1:53243593-53243612 None:intergenic 65.0%
AGGTCCTGCGCTAGTGGGAG+AGG + chr8_1:53243594-53243613 Msa1200550:CDS 65.0%
AACGACTGCGGGAGGAGCCT+AGG + chr8_1:53245159-53245178 Msa1200550:three_prime_UTR 65.0%
ACGACTGCGGGAGGAGCCTA+GGG + chr8_1:53245160-53245179 Msa1200550:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 53235005 53245547 53235005 ID=Msa1200550;Name=Msa1200550
chr8_1 mRNA 53235005 53245547 53235005 ID=Msa1200550-mRNA-1;Parent=Msa1200550;Name=Msa1200550-mRNA-1;_AED=0.08;_eAED=0.08;_QI=851|1|1|1|0.66|0.6|10|643|963
chr8_1 exon 53235005 53235495 53235005 ID=Msa1200550-mRNA-1:exon:17023;Parent=Msa1200550-mRNA-1
chr8_1 exon 53235586 53235647 53235586 ID=Msa1200550-mRNA-1:exon:17024;Parent=Msa1200550-mRNA-1
chr8_1 exon 53235995 53236109 53235995 ID=Msa1200550-mRNA-1:exon:17025;Parent=Msa1200550-mRNA-1
chr8_1 exon 53236192 53236315 53236192 ID=Msa1200550-mRNA-1:exon:17026;Parent=Msa1200550-mRNA-1
chr8_1 exon 53236967 53237064 53236967 ID=Msa1200550-mRNA-1:exon:17027;Parent=Msa1200550-mRNA-1
chr8_1 exon 53237484 53237825 53237484 ID=Msa1200550-mRNA-1:exon:17028;Parent=Msa1200550-mRNA-1
chr8_1 exon 53241286 53241452 53241286 ID=Msa1200550-mRNA-1:exon:17029;Parent=Msa1200550-mRNA-1
chr8_1 exon 53241541 53242364 53241541 ID=Msa1200550-mRNA-1:exon:17030;Parent=Msa1200550-mRNA-1
chr8_1 exon 53243365 53245330 53243365 ID=Msa1200550-mRNA-1:exon:17031;Parent=Msa1200550-mRNA-1
chr8_1 exon 53245351 53245547 53245351 ID=Msa1200550-mRNA-1:exon:17032;Parent=Msa1200550-mRNA-1
chr8_1 five_prime_UTR 53235005 53235495 53235005 ID=Msa1200550-mRNA-1:five_prime_utr;Parent=Msa1200550-mRNA-1
chr8_1 five_prime_UTR 53235586 53235647 53235586 ID=Msa1200550-mRNA-1:five_prime_utr;Parent=Msa1200550-mRNA-1
chr8_1 five_prime_UTR 53235995 53236109 53235995 ID=Msa1200550-mRNA-1:five_prime_utr;Parent=Msa1200550-mRNA-1
chr8_1 five_prime_UTR 53236192 53236315 53236192 ID=Msa1200550-mRNA-1:five_prime_utr;Parent=Msa1200550-mRNA-1
chr8_1 five_prime_UTR 53236967 53237025 53236967 ID=Msa1200550-mRNA-1:five_prime_utr;Parent=Msa1200550-mRNA-1
chr8_1 CDS 53237026 53237064 53237026 ID=Msa1200550-mRNA-1:cds;Parent=Msa1200550-mRNA-1
chr8_1 CDS 53237484 53237825 53237484 ID=Msa1200550-mRNA-1:cds;Parent=Msa1200550-mRNA-1
chr8_1 CDS 53241286 53241452 53241286 ID=Msa1200550-mRNA-1:cds;Parent=Msa1200550-mRNA-1
chr8_1 CDS 53241541 53242364 53241541 ID=Msa1200550-mRNA-1:cds;Parent=Msa1200550-mRNA-1
chr8_1 CDS 53243365 53244884 53243365 ID=Msa1200550-mRNA-1:cds;Parent=Msa1200550-mRNA-1
chr8_1 three_prime_UTR 53244885 53245330 53244885 ID=Msa1200550-mRNA-1:three_prime_utr;Parent=Msa1200550-mRNA-1
chr8_1 three_prime_UTR 53245351 53245547 53245351 ID=Msa1200550-mRNA-1:three_prime_utr;Parent=Msa1200550-mRNA-1
Gene Sequence

>Msa1200550

ATGAAATTTTATGAGGAGGCCTATCATACACTGCGAGAGATTGTTGGGGTGACAACAAGGTTACCAGCTGTACAACGCTTAGTTGAGATAAAATCGGTTTCTGAACAACTGCATTTCAAGATATCAACATTGTTACTGCATAGTGGGAAGGTTACAGAAGCAGTGACATGGTTCCGCCAGCACAAGAATACATATAAAAAGCTAGTTGGTGCTCCAGATGCAATATTTGTTCACTGGGAGTGGATGAGTAGACAATATTTGGTATTTGGTGAATTGTTGGAGACAAGTTCGAAAATCACTCAAAATTTTCCACCTGTTATTTTAGGCTCTTCATCTAAACCACTGTCAGAGTGGGAATACTATCCTGCTTATTACTATCAGTTAGCAGCTCACTACATGAGTGAAAAGAGGTCAGCACTGGAGCTTGCAATCTCAATGTCAGAAACTCCCAATGAGGTTGACAGCGGTGCTGATTCAGTTGTTCCTTCTGCGTATGTCGGTCAGTTTGCTCGGTTACTTGAGGAAGGGGATAATGTTGATATGCTACCTCTCACTGATGAAGAGTACACCCATTATACTGTTTCTGAAGGAAAAAGGTTTCGAGATTCTCTTGAAATTATTGCTCTTCTAAAAAAAGCTTATGAATCTTACAGTGCTATTAAAATTCAGAGGATGAGTTCCTTTTGTGGGTTCCAGATGGCCAAAGAATATTTTGCTGAAGGTGATATTGTCAACGCAAAGCAGATTTTTGATAGTATTGCTAGTCTATACAGAAAAGAGGGATGGGTAACTTTATTGTGGGAGGTCCTGGGTTACCTGCGAGAGTGCTCACGGAAAAATGGTACTATTAAAGATTTTGTGGAGTATTCCCTTGAAATGGCTGCACTCCCAATATCATCCGATACCGGTGTCCAGAGAGACACTGGTCCAGCTGGTCCGGCAAATCTACGGCAAAGAGAAGTTGTACACAAGGAGGTTTTTGAGTTTGTTGGTGACGCTTCAGTGTTTACAAAGAGTGAAGACTCTAGTAATCTCAAGATTACTGCCGATGAATCAGTTCAGCTTGAGGTTGATCTTGTCAGTCCGCTCAGGTTGGTCATGCTTGTGTCTGTTGCTTTCCATGAACAGACAATCAAGCCTGGAGCCTCAACTTTGATAACAGTATCACTTCTTTCCCACCTACCCCTTACTGTTGAGATCGATCAATTAGAAGTCCAGTTCAACCGATCTTCTTGTAATTTCTTCATAACAAATGCCCAAAAACATCAATCTGTAGAGGACAGTGATACTCAACAGCAGAGAACAGAAACAGCACCGTCTCTTTTGCTTCTATCTAATAAATGGCTACGGTTGACCTATAATATCCAATCTGATCAAAGTGGAAAACTTGAATGCCTGTCTGTTATTGCGAAAATTGGATCACACTTCACAATCTGCTGCAGAGCTGAAAGTCCTACTTCACTGGATAGCTTACCTCTCTGGACATTGGAGGATTGTATACAAACTGTTCCCATAAAAGATGCAGTTCTTGTTTTCTCTGGCCAGAAGTCTACTCAAGTGGAAGAACCAGATCCACAGGTAGATCTGTGTCTTGGTGCCTCAGGTCCTGCGCTAGTGGGAGAGGTTTTCCTGGTACCTGTAACATTGGTCTCCAAAGGCCATGATGTCTACTCCGGTGAATTGAAGATCAATCTTGTGGATGTGAAGGGAGGTGGCTTGTTTAGTCCAAGAGACTCCGAGCCATATTCTATGGACAGCCATCATGTTCAGCTGCTGGGTATATCTGGACCAGAAGGGGAAGACGATTCTCAATTAGATTCAGATAATATAAAGAAAATACAACAGTCATTTGGATTAATTTCTGTTCCCTTTATTAAAAATGGGGATTCTTGGTCATGCAGATTAGAAATTAAGTGGCACCGACCTAAACCCATCATGCTTTACGTATCTTTGGGTTATACTCCAAATGGTGGTGAATCAAATGCACAGATGGTCCATGTCCATAAGAACTTGCAAATTGAAGGGACCACTGCTATTGTTATTAACCACCATTACTTGATGCCATTCAGACGAGACCCATTGTTACTCACTAAGAACAAGCAAGCCTCGGACTCTGAACAGAACAAGCAAGCCTCAGAGTCTGATCAACCAGAATCACTGCCCTCGAACCAAAAAACTGTGCTCATTGTTAGTGCGAAGAACTGCACTGAGGTTCCACTAAGGTTGAAGTCCCTTTCTGTAGAGGAAGAGGATGGTGTTGAAAGGACGTGTTTCATACAACATGGAAGTGAAGAGCTTTCAAAACCCGCACTTCTTGTTCCAGGGGAAGAGTTCAAGAAAGTATTTTCTGTCAGTTCCAATGTGAACATTTCAAAGCTCAGACTAGGAACTGTGTGTTTGAGATGGAGGAGGGACTTGGGTGTTGATGAGAAATCTGCTTCTACCACAACATTGTCTTCTTGGGTTGTGACTAAACAAAAACTGCCGGATAAGAATGTGGAGTTACCGCCATTGATTGTGAGTATGGAATGTCCCCCTTATGCAATCTTGGGAGATCCCTTCACATACTGTATCAGAATTTTGAACCAGACACAATTGCTGCAAGAAATCAAATACTCATTGGCAGATGCACAAAGTTTTGTGTTATGTGGGTATCATAATGACACTGTATACGTTCTTCCAAAATCTGAACACATTGTCAGTTATAAACTTGTCCCACTTGCCTCAGGCATGCAACAGTTACCTAGATTTTCAATGACATCTGCGAGATACTCAGCAGCATATCAGCCTTCGAACTCTTCAAACTCAGTTTTTGTTTTCCCTTCCAAACCTCATTTCAAAACCGCAGGCTCCACAAGTTTTAGGGTGGAGGAGTCTGTAGCTAATGAATAA
Protein sequence

>Msa1200550

MKFYEEAYHTLREIVGVTTRLPAVQRLVEIKSVSEQLHFKISTLLLHSGKVTEAVTWFRQHKNTYKKLVGAPDAIFVHWEWMSRQYLVFGELLETSSKITQNFPPVILGSSSKPLSEWEYYPAYYYQLAAHYMSEKRSALELAISMSETPNEVDSGADSVVPSAYVGQFARLLEEGDNVDMLPLTDEEYTHYTVSEGKRFRDSLEIIALLKKAYESYSAIKIQRMSSFCGFQMAKEYFAEGDIVNAKQIFDSIASLYRKEGWVTLLWEVLGYLRECSRKNGTIKDFVEYSLEMAALPISSDTGVQRDTGPAGPANLRQREVVHKEVFEFVGDASVFTKSEDSSNLKITADESVQLEVDLVSPLRLVMLVSVAFHEQTIKPGASTLITVSLLSHLPLTVEIDQLEVQFNRSSCNFFITNAQKHQSVEDSDTQQQRTETAPSLLLLSNKWLRLTYNIQSDQSGKLECLSVIAKIGSHFTICCRAESPTSLDSLPLWTLEDCIQTVPIKDAVLVFSGQKSTQVEEPDPQVDLCLGASGPALVGEVFLVPVTLVSKGHDVYSGELKINLVDVKGGGLFSPRDSEPYSMDSHHVQLLGISGPEGEDDSQLDSDNIKKIQQSFGLISVPFIKNGDSWSCRLEIKWHRPKPIMLYVSLGYTPNGGESNAQMVHVHKNLQIEGTTAIVINHHYLMPFRRDPLLLTKNKQASDSEQNKQASESDQPESLPSNQKTVLIVSAKNCTEVPLRLKSLSVEEEDGVERTCFIQHGSEELSKPALLVPGEEFKKVFSVSSNVNISKLRLGTVCLRWRRDLGVDEKSASTTTLSSWVVTKQKLPDKNVELPPLIVSMECPPYAILGDPFTYCIRILNQTQLLQEIKYSLADAQSFVLCGYHNDTVYVLPKSEHIVSYKLVPLASGMQQLPRFSMTSARYSAAYQPSNSSNSVFVFPSKPHFKTAGSTSFRVEESVANE*