AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1203230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203230 MtrunA17_Chr8g0373821 94.944 534 26 1 1 534 1 533 0.0 1048
Msa1203230 MtrunA17_Chr5g0403241 63.636 319 103 4 225 534 1188 1502 4.23e-126 402
Msa1203230 MtrunA17_Chr5g0403241 43.448 145 75 1 64 201 492 636 1.76e-29 124
Msa1203230 MtrunA17_Chr4g0075321 66.875 320 96 5 223 534 742 1059 5.31e-126 394
Msa1203230 MtrunA17_Chr4g0075321 44.400 250 104 3 13 240 326 562 1.40e-45 172
Msa1203230 MtrunA17_Chr8g0373841 58.468 248 59 4 6 240 20 236 2.41e-78 254
Msa1203230 MtrunA17_Chr5g0399801 37.788 217 104 6 343 534 874 1084 2.59e-35 141
Msa1203230 MtrunA17_Chr4g0003501 36.916 214 108 6 343 534 742 950 4.40e-34 137
Msa1203230 MtrunA17_Chr4g0003511 37.674 215 107 6 343 534 837 1047 2.85e-33 135
Msa1203230 MtrunA17_Chr7g0255181 32.450 302 156 13 248 534 432 700 7.40e-31 127
Msa1203230 MtrunA17_Chr1g0183321 39.344 183 100 6 361 534 561 741 2.86e-30 125
Msa1203230 MtrunA17_Chr1g0190311 39.459 185 98 7 361 534 458 639 4.11e-30 124
Msa1203230 MtrunA17_Chr7g0262001 38.122 181 105 4 361 534 517 697 4.04e-28 119
Msa1203230 MtrunA17_Chr3g0080761 29.878 328 171 11 237 534 361 659 1.23e-27 117
Msa1203230 MtrunA17_Chr1g0170651 31.454 337 181 12 204 534 249 541 3.96e-27 115
Msa1203230 MtrunA17_Chr8g0354821 29.755 326 175 11 235 534 386 683 1.48e-26 114
Msa1203230 MtrunA17_Chr7g0232811 31.390 223 110 5 355 534 312 534 2.33e-24 106
Msa1203230 MtrunA17_Chr6g0477001 35.227 176 100 3 359 534 85 246 2.17e-23 101
Msa1203230 MtrunA17_Chr7g0232981 34.409 186 100 3 355 518 303 488 4.12e-23 102
Msa1203230 MtrunA17_Chr4g0075341 39.521 167 59 3 47 208 167 296 4.46e-22 98.2
Msa1203230 MtrunA17_Chr4g0075341 51.685 89 39 1 54 138 24 112 3.41e-19 89.7
Msa1203230 MtrunA17_Chr6g0476121 32.701 211 111 5 352 534 431 638 4.86e-22 100
Msa1203230 MtrunA17_Chr8g0368901 30.645 186 115 3 343 515 571 755 7.19e-22 99.8
Msa1203230 MtrunA17_Chr7g0252211 27.673 318 171 10 248 534 463 752 7.34e-22 99.8
Msa1203230 MtrunA17_Chr6g0476111 33.645 214 108 7 351 534 480 689 1.08e-21 99.0
Msa1203230 MtrunA17_Chr7g0232841 32.864 213 103 7 362 534 311 523 1.21e-21 98.2
Msa1203230 MtrunA17_Chr1g0201311 34.940 166 95 3 369 534 67 219 3.49e-21 96.7
Msa1203230 MtrunA17_Chr8g0368911 29.032 186 118 3 343 515 564 748 4.75e-21 97.4
Msa1203230 MtrunA17_Chr2g0305371 34.706 170 95 4 365 534 314 467 1.14e-20 95.1
Msa1203230 MtrunA17_Chr3g0125251 35.503 169 91 4 369 534 1307 1460 1.53e-20 96.3
Msa1203230 MtrunA17_Chr1g0201621 34.337 166 96 3 369 534 67 219 1.66e-20 94.7
Msa1203230 MtrunA17_Chr8g0369301 26.502 283 161 10 249 515 484 735 2.59e-20 94.7
Msa1203230 MtrunA17_Chr6g0467381 29.189 185 105 4 354 518 387 565 4.26e-18 87.4
Msa1203230 MtrunA17_Chr6g0467421 29.189 185 105 4 354 518 387 565 4.33e-18 87.4
Msa1203230 MtrunA17_Chr6g0467531 29.189 185 105 4 354 518 387 565 1.25e-17 86.3
Msa1203230 MtrunA17_Chr6g0467411 29.730 185 103 5 355 518 305 483 1.74e-17 85.1
Msa1203230 MtrunA17_Chr3g0094881 29.167 192 121 5 346 523 439 629 2.21e-17 85.5
Msa1203230 MtrunA17_Chr1g0163051 28.962 183 116 4 346 515 463 644 2.74e-17 85.1
Msa1203230 MtrunA17_Chr6g0467401 28.649 185 106 4 354 518 387 565 6.92e-17 84.0
Msa1203230 MtrunA17_Chr2g0306961 28.649 185 106 4 354 518 286 464 1.37e-16 82.4
Msa1203230 MtrunA17_Chr6g0460921 31.492 181 107 5 364 534 242 415 9.68e-16 79.3
Msa1203230 MtrunA17_Chr1g0163041 28.962 183 116 4 346 515 382 563 2.92e-15 78.6
Msa1203230 MtrunA17_Chr2g0297191 36.496 137 73 4 398 534 1044 1166 2.73e-14 76.3
Msa1203230 MtrunA17_Chr1g0149611 32.051 156 80 5 388 534 365 503 1.04e-13 73.6
Msa1203230 MtrunA17_Chr7g0232751 50.000 62 31 0 457 518 30 91 5.16e-13 65.9
Msa1203230 MtrunA17_Chr1g0149581 30.769 156 82 5 388 534 1523 1661 2.18e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203230 AT2G23740.1 56.757 296 112 5 248 534 1082 1370 1.45e-94 314
Msa1203230 AT2G23740.1 35.294 136 80 2 65 192 401 536 8.39e-18 87.8
Msa1203230 AT2G23740.3 56.757 296 112 5 248 534 1089 1377 1.69e-94 314
Msa1203230 AT2G23740.3 35.294 136 80 2 65 192 408 543 8.93e-18 87.8
Msa1203230 AT2G23740.6 56.757 296 112 5 248 534 1089 1377 1.69e-94 314
Msa1203230 AT2G23740.6 35.294 136 80 2 65 192 408 543 8.93e-18 87.8
Msa1203230 AT2G23740.2 56.757 296 112 5 248 534 1089 1377 1.69e-94 314
Msa1203230 AT2G23740.2 35.294 136 80 2 65 192 408 543 8.93e-18 87.8
Msa1203230 AT2G23740.4 58.369 233 84 4 248 474 1089 1314 3.70e-74 256
Msa1203230 AT2G23740.4 35.294 136 80 2 65 192 408 543 8.34e-18 87.8
Msa1203230 AT2G23740.5 58.369 233 84 4 248 474 1089 1314 3.70e-74 256
Msa1203230 AT2G23740.5 35.294 136 80 2 65 192 408 543 8.34e-18 87.8
Msa1203230 AT1G73100.1 30.154 325 169 11 237 534 371 664 2.48e-32 132
Msa1203230 AT3G04380.2 34.934 229 118 10 316 534 223 430 3.42e-30 123
Msa1203230 AT3G04380.5 34.934 229 118 10 316 534 207 414 3.94e-30 123
Msa1203230 AT3G04380.6 34.934 229 118 10 316 534 223 430 4.83e-30 123
Msa1203230 AT3G04380.3 34.934 229 118 10 316 534 234 441 4.91e-30 123
Msa1203230 AT3G04380.1 34.934 229 118 10 316 534 250 457 5.04e-30 123
Msa1203230 AT2G22740.2 34.722 216 113 6 343 534 574 785 5.23e-30 125
Msa1203230 AT2G22740.1 34.722 216 113 6 343 534 574 785 5.23e-30 125
Msa1203230 AT3G04380.4 34.934 229 118 10 316 534 250 457 5.86e-30 123
Msa1203230 AT1G04050.3 38.547 179 102 5 362 534 438 614 1.00e-28 120
Msa1203230 AT1G04050.2 38.547 179 102 5 362 534 542 718 1.18e-28 121
Msa1203230 AT1G04050.1 38.547 179 102 5 362 534 542 718 1.18e-28 121
Msa1203230 AT2G35160.5 35.979 189 97 5 355 534 580 753 1.80e-28 120
Msa1203230 AT2G35160.2 35.979 189 97 5 355 534 616 789 2.28e-28 120
Msa1203230 AT2G35160.3 35.979 189 97 5 355 534 616 789 2.28e-28 120
Msa1203230 AT2G35160.1 35.979 189 97 5 355 534 616 789 2.28e-28 120
Msa1203230 AT2G35160.4 35.979 189 97 5 355 534 616 789 2.28e-28 120
Msa1203230 AT5G43990.16 37.017 181 101 6 362 534 506 681 1.10e-25 112
Msa1203230 AT5G43990.5 37.017 181 101 6 362 534 506 681 1.10e-25 112
Msa1203230 AT5G43990.17 37.017 181 101 6 362 534 506 681 1.10e-25 112
Msa1203230 AT5G43990.14 37.017 181 101 6 362 534 506 681 1.10e-25 112
Msa1203230 AT5G43990.8 37.017 181 101 6 362 534 457 632 1.11e-25 111
Msa1203230 AT5G43990.12 37.017 181 101 6 362 534 457 632 1.11e-25 111
Msa1203230 AT5G43990.6 37.017 181 101 6 362 534 457 632 1.11e-25 111
Msa1203230 AT5G43990.13 37.017 181 101 6 362 534 457 632 1.11e-25 111
Msa1203230 AT5G43990.3 37.017 181 101 6 362 534 526 701 1.17e-25 112
Msa1203230 AT5G43990.11 37.017 181 101 6 362 534 526 701 1.17e-25 112
Msa1203230 AT5G43990.1 37.017 181 101 6 362 534 526 701 1.17e-25 112
Msa1203230 AT5G43990.4 37.017 181 101 6 362 534 526 701 1.17e-25 112
Msa1203230 AT5G43990.7 37.017 181 101 6 362 534 437 612 1.22e-25 111
Msa1203230 AT5G43990.9 37.017 181 101 6 362 534 549 724 1.28e-25 111
Msa1203230 AT5G43990.2 37.017 181 101 6 362 534 549 724 1.28e-25 111
Msa1203230 AT5G43990.15 37.017 181 101 6 362 534 529 704 1.28e-25 111
Msa1203230 AT5G43990.10 37.017 181 101 6 362 534 529 704 1.28e-25 111
Msa1203230 AT5G13960.1 33.476 233 121 6 332 534 391 619 3.40e-25 110
Msa1203230 AT5G13960.2 33.476 233 121 6 332 534 257 485 3.71e-25 109
Msa1203230 AT5G04940.2 32.243 214 121 5 343 534 454 665 1.35e-23 105
Msa1203230 AT5G04940.1 32.243 214 121 5 343 534 454 665 1.35e-23 105
Msa1203230 AT1G17770.1 28.354 328 182 13 233 534 388 688 8.18e-22 100
Msa1203230 AT3G03750.2 33.155 187 105 4 364 534 169 351 2.12e-21 96.3
Msa1203230 AT4G30860.1 34.118 170 96 4 365 534 307 460 2.24e-20 94.7
Msa1203230 AT1G77300.1 33.526 173 89 5 369 534 1009 1162 1.65e-19 93.6
Msa1203230 AT1G77300.2 33.526 173 89 5 369 534 1009 1162 2.01e-19 93.2
Msa1203230 AT3G59960.3 33.544 158 91 3 377 534 102 245 5.86e-18 84.7
Msa1203230 AT3G59960.2 33.544 158 91 3 377 534 102 245 5.86e-18 84.7
Msa1203230 AT3G59960.4 33.544 158 91 3 377 534 102 245 5.86e-18 84.7
Msa1203230 AT3G59960.1 33.544 158 91 3 377 534 102 245 8.69e-18 85.1
Msa1203230 AT1G76710.3 31.176 170 96 3 369 534 72 224 1.81e-17 85.9
Msa1203230 AT1G76710.4 31.176 170 96 3 369 534 72 224 1.91e-17 85.9
Msa1203230 AT1G76710.2 31.176 170 96 3 369 534 72 224 2.41e-17 85.5
Msa1203230 AT1G76710.1 31.176 170 96 3 369 534 72 224 2.41e-17 85.5
Msa1203230 AT2G33290.1 24.471 331 204 8 204 515 334 637 2.82e-17 85.5
Msa1203230 AT2G33290.3 24.471 331 204 8 204 515 334 637 2.82e-17 85.5
Msa1203230 AT2G33290.4 24.471 331 204 8 204 515 334 637 2.82e-17 85.5
Msa1203230 AT2G33290.2 24.471 331 204 8 204 515 334 637 2.82e-17 85.5
Msa1203230 AT2G44150.1 34.177 158 90 3 377 534 107 250 8.95e-17 82.4
Msa1203230 AT4G13460.1 26.738 187 122 3 343 515 451 636 3.11e-16 82.4
Msa1203230 AT4G13460.2 26.738 187 122 3 343 515 451 636 3.11e-16 82.4
Msa1203230 AT2G24740.1 31.250 192 97 7 371 534 566 750 7.59e-16 81.3
Msa1203230 AT5G42400.7 35.036 137 75 4 398 534 1261 1383 7.40e-14 75.5
Msa1203230 AT5G42400.2 35.036 137 75 4 398 534 1261 1383 7.40e-14 75.5
Msa1203230 AT5G42400.8 35.036 137 75 4 398 534 1261 1383 7.40e-14 75.5
Msa1203230 AT5G42400.5 35.036 137 75 4 398 534 1261 1383 7.40e-14 75.5
Msa1203230 AT5G42400.4 35.036 137 75 4 398 534 1261 1383 7.40e-14 75.5
Msa1203230 AT5G42400.1 35.036 137 75 4 398 534 1261 1383 7.40e-14 75.5
Msa1203230 AT5G42400.3 35.036 137 75 4 398 534 1261 1383 7.40e-14 75.5
Msa1203230 AT5G42400.6 35.036 137 75 4 398 534 1261 1383 7.40e-14 75.5
Msa1203230 AT3G03750.1 29.348 184 100 6 364 534 169 335 6.99e-13 70.5

Find 116 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATACATAATTTCCTTAT+TGG 0.135814 8_1:+57291266 None:intergenic
GATGAAGAAAAGGACATATT+TGG 0.136959 8_1:-57292903 Msa1203230:CDS
GGCGAAATGCTCAAGCTTTC+TGG 0.183364 8_1:-57293553 Msa1203230:CDS
TTGATCTCCAATGGACTTTC+CGG 0.248032 8_1:+57293628 None:intergenic
CGAATATGATATATCGAAAA+TGG 0.248933 8_1:-57294148 Msa1203230:CDS
ATGAAGAAAAGGACATATTT+GGG 0.300996 8_1:-57292902 Msa1203230:CDS
GAACGGAGTTCGTGTTAAAT+TGG 0.304027 8_1:-57292499 Msa1203230:CDS
AGTCCATGCAAATCAGGTTC+TGG 0.321251 8_1:+57293665 None:intergenic
CCGTTCTGCAATATTCTGTT+TGG 0.323633 8_1:+57292516 None:intergenic
GGTCTTTATGACAGAGAAAA+AGG 0.323703 8_1:-57292475 Msa1203230:intron
TATACGTGATCACACGTTTC+AGG 0.337540 8_1:+57292933 None:intergenic
CTACGCAATTGATGAAGAAT+TGG 0.343331 8_1:+57293307 None:intergenic
AACTCTGTAATCCACAAGAT+TGG 0.362412 8_1:+57291682 None:intergenic
TGTGGAGGTACAACTGGTTC+TGG 0.365849 8_1:-57293823 Msa1203230:CDS
TGTAAATGGTCGAATCATAT+TGG 0.379997 8_1:-57292850 Msa1203230:CDS
AGGTTCGCATACGATGTAAA+TGG 0.389210 8_1:-57292864 Msa1203230:CDS
CCCATTTGTGGAGGTACAAC+TGG 0.389596 8_1:-57293829 Msa1203230:CDS
CAACTTATTCCGCAACATAC+TGG 0.390580 8_1:+57291314 None:intergenic
AACATTTAAAGTGTCCAATA+AGG 0.399037 8_1:-57291280 Msa1203230:three_prime_UTR
TGTACGACGGTTTGAATTTG+AGG 0.401657 8_1:+57293723 None:intergenic
GGACTTGGTGTTGGCACATC+CGG 0.404270 8_1:-57293647 Msa1203230:CDS
ATTCACAGGGATTCGGAGTA+AGG 0.405434 8_1:-57292380 Msa1203230:intron
ACCAGTTGTACCTCCACAAA+TGG 0.405601 8_1:+57293828 None:intergenic
TTCTTTGCAAAGAACATCTC+AGG 0.407939 8_1:-57293574 Msa1203230:CDS
TGATAATGAGAATGCTGTTA+AGG 0.413807 8_1:-57293503 Msa1203230:CDS
TATGCGAACCTTCCGGCCAT+TGG 0.417185 8_1:+57292876 None:intergenic
TACATCGTATGCGAACCTTC+CGG 0.420636 8_1:+57292869 None:intergenic
ACACCAAGTCCATGCAAATC+AGG 0.422391 8_1:+57293659 None:intergenic
TGTCTAGGTTCATCAATAAC+AGG 0.425670 8_1:-57292066 Msa1203230:intron
TTATCTGATTCACAGGGATT+CGG 0.425686 8_1:-57292387 Msa1203230:intron
TAGTAGAATCAATGACATAT+CGG 0.427363 8_1:+57292101 None:intergenic
GAAGGATATCCTTGTCTTTG+TGG 0.429180 8_1:-57291410 Msa1203230:CDS
TATGTATGTGTAACATTGAA+TGG 0.430897 8_1:-57291253 Msa1203230:three_prime_UTR
GCAAGCTAAGTGAATCCCTT+TGG 0.435509 8_1:+57294073 None:intergenic
ATCAAGGCCTGTGGATGAAA+TGG 0.435866 8_1:-57294010 Msa1203230:CDS
CTGCAATATTCTGTTTGGAC+AGG 0.439001 8_1:+57292521 None:intergenic
CAGCTGTTCACCCAATCTTG+TGG 0.439542 8_1:-57291693 Msa1203230:CDS
GTAAACATCTCCCAAGGCTT+AGG 0.442228 8_1:+57293343 None:intergenic
GTCCATGCAAATCAGGTTCT+GGG 0.452226 8_1:+57293666 None:intergenic
GTCATTGATTCTACTACATA+TGG 0.457853 8_1:-57292094 Msa1203230:CDS
CTTCGACCAATCTACTCATA+TGG 0.464079 8_1:+57292131 None:intergenic
GACGGTTTGAATTTGAGGTC+TGG 0.466441 8_1:+57293728 None:intergenic
TGAATAGCCATTTCATCCAC+AGG 0.471451 8_1:+57294003 None:intergenic
TTGATTCTGCCGCAAAGCTT+AGG 0.472145 8_1:+57293437 None:intergenic
AGTAGAATCAATGACATATC+GGG 0.477925 8_1:+57292102 None:intergenic
ACTCTGTAATCCACAAGATT+GGG 0.478800 8_1:+57291683 None:intergenic
ATGCAATGACCTAAGCTTTG+CGG 0.481210 8_1:-57293446 Msa1203230:CDS
GAACCTGATTTGCATGGACT+TGG 0.484117 8_1:-57293662 Msa1203230:CDS
CATTGTCGATCCTTGGTACC+AGG 0.488120 8_1:+57293967 None:intergenic
ATGTATATCTTCCTAAGCCT+TGG 0.489667 8_1:-57293354 Msa1203230:CDS
TGTATATCTTCCTAAGCCTT+GGG 0.489888 8_1:-57293353 Msa1203230:CDS
GAGATGTTCTTTGCAAAGAA+AGG 0.490990 8_1:+57293577 None:intergenic
TGCTCGACATTGTCGATCCT+TGG 0.497731 8_1:+57293960 None:intergenic
CTACATATGGCAATGTGTCT+AGG 0.499868 8_1:-57292081 Msa1203230:CDS
AAATGTTGAGGTTCTCGTAA+AGG 0.502271 8_1:+57291366 None:intergenic
GATTGTAAGCATACACATAT+CGG 0.502921 8_1:-57291644 Msa1203230:CDS
TGTAAGTATCGTTCCCGTCC+TGG 0.503749 8_1:-57293793 Msa1203230:CDS
TGCTAACCATATGAGTAGAT+TGG 0.507042 8_1:-57292137 Msa1203230:CDS
CATTGGCACAAAGCCGAGAC+GGG 0.509657 8_1:-57293751 Msa1203230:CDS
AAGAATTGGCTTTGTCACAT+AGG 0.511032 8_1:+57293321 None:intergenic
GATTTGCATGGACTTGGTGT+TGG 0.512745 8_1:-57293656 Msa1203230:CDS
AAAGTAAGCACTCCCATTTG+TGG 0.515955 8_1:-57293841 Msa1203230:CDS
AAAATTAGGGTCGTCGCGAA+AGG 0.515962 8_1:-57293479 Msa1203230:CDS
TATGAGCCTGTGCTCGGAGA+AGG 0.522588 8_1:-57291428 Msa1203230:CDS
CGGAGTTCGTGTTAAATTGG+AGG 0.527617 8_1:-57292496 Msa1203230:CDS
GTATATATTGCTACCAATTG+TGG 0.528485 8_1:+57293903 None:intergenic
CAAACCGTCGTACATTAAAG+AGG 0.536529 8_1:-57293714 Msa1203230:CDS
CAGTGTGTGAGAACCACAAT+TGG 0.538082 8_1:-57293916 Msa1203230:CDS
ATTTGAGGTCTGGCCCGTCT+CGG 0.538631 8_1:+57293738 None:intergenic
GGCACATCCGGAAAGTCCAT+TGG 0.540615 8_1:-57293635 Msa1203230:CDS
ACATCATTGATGACCGACAC+TGG 0.541784 8_1:+57293604 None:intergenic
CAGGGATTCGGAGTAAGGGC+TGG 0.542170 8_1:-57292375 Msa1203230:CDS
CCAGTTGTACCTCCACAAAT+GGG 0.544157 8_1:+57293829 None:intergenic
GACACTGGATTGATCTCCAA+TGG 0.545742 8_1:+57293619 None:intergenic
CAGAGTTATTGTAGAGGGCA+CGG 0.549634 8_1:-57291666 Msa1203230:CDS
GGATATCCTTCTCCGAGCAC+AGG 0.557561 8_1:+57291422 None:intergenic
ATTTGTAGAACCTGGTACCA+AGG 0.559017 8_1:-57293977 Msa1203230:CDS
GTCTGATATAGAAAACCAAA+GGG 0.569533 8_1:-57294088 Msa1203230:CDS
ATTCAAATATTTGTAGAACC+TGG 0.571965 8_1:-57293985 Msa1203230:CDS
ATAGCAATGGAACAGTATCA+AGG 0.573226 8_1:-57294026 Msa1203230:CDS
TTCCCAGAACCTGATTTGCA+TGG 0.573567 8_1:-57293668 Msa1203230:CDS
ACATTGGCACAAAGCCGAGA+CGG 0.573840 8_1:-57293752 Msa1203230:CDS
ATTGCGTAGTCTTGATTCTG+AGG 0.575859 8_1:-57293293 Msa1203230:intron
TTAGACTGTCCAGTATGTTG+CGG 0.576338 8_1:-57291323 Msa1203230:three_prime_UTR
AGTCTGATATAGAAAACCAA+AGG 0.577396 8_1:-57294089 Msa1203230:CDS
GAAATGATCTCGTATAGCAA+TGG 0.579189 8_1:-57294039 Msa1203230:CDS
TATGACTATGAGCCTGTGCT+CGG 0.579323 8_1:-57291434 Msa1203230:CDS
CTTTCCTCTTTAATGTACGA+CGG 0.585682 8_1:+57293710 None:intergenic
TTCACAGGGATTCGGAGTAA+GGG 0.591817 8_1:-57292379 Msa1203230:intron
AAATGGTCGAATCATATTGG+AGG 0.599006 8_1:-57292847 Msa1203230:intron
CAGGAGGCACACAACAGACG+CGG 0.600597 8_1:-57292294 Msa1203230:CDS
TGTGGATCTTTGAAATGCTG+AGG 0.600856 8_1:-57291392 Msa1203230:exon
TTGGGAAACCAATGGCCGGA+AGG 0.605290 8_1:-57292884 Msa1203230:CDS
CATATGTCAAAGACAAGGGA+AGG 0.609395 8_1:-57293939 Msa1203230:CDS
ATATTTGGGAAACCAATGGC+CGG 0.622843 8_1:-57292888 Msa1203230:CDS
GATTACAGAGTTATTGTAGA+GGG 0.624276 8_1:-57291671 Msa1203230:CDS
AGATCTACTACACATATCAC+AGG 0.627421 8_1:+57293412 None:intergenic
GGACATATTTGGGAAACCAA+TGG 0.633831 8_1:-57292892 Msa1203230:CDS
TTCAAAGATCCACAAAGACA+AGG 0.641053 8_1:+57291401 None:intergenic
TGGAACAGTATCAAGGCCTG+TGG 0.651781 8_1:-57294019 Msa1203230:CDS
ACGTTTGTGTGTGAGTACAT+TGG 0.657919 8_1:-57292333 Msa1203230:CDS
AGGCACACAACAGACGCGGA+AGG 0.658214 8_1:-57292290 Msa1203230:intron
ATTGGAGATCAATCCAGTGT+CGG 0.662554 8_1:-57293617 Msa1203230:CDS
GTAGAATCAATGACATATCG+GGG 0.662628 8_1:+57292103 None:intergenic
ACATAGGTAAACATCTCCCA+AGG 0.667902 8_1:+57293337 None:intergenic
AATAATACTTCGATTCACAA+AGG 0.669953 8_1:+57291169 None:intergenic
GGATTACAGAGTTATTGTAG+AGG 0.671573 8_1:-57291672 Msa1203230:CDS
CATATGAGTAGATTGGTCGA+AGG 0.675409 8_1:-57292130 Msa1203230:CDS
TCGAGCATATGTCAAAGACA+AGG 0.675984 8_1:-57293944 Msa1203230:CDS
CGAGCATATGTCAAAGACAA+GGG 0.676900 8_1:-57293943 Msa1203230:CDS
CCAAACAGAATATTGCAGAA+CGG 0.677454 8_1:-57292516 Msa1203230:CDS
AGGAAAGCTGAAGAAAATTG+CGG 0.686851 8_1:-57293694 Msa1203230:CDS
GTAAGCACTCCCATTTGTGG+AGG 0.692374 8_1:-57293838 Msa1203230:CDS
ACACATTGAACATCTCGTTG+AGG 0.704374 8_1:-57291199 Msa1203230:three_prime_UTR
AAAGCTGAAGAAAATTGCGG+TGG 0.708696 8_1:-57293691 Msa1203230:CDS
TTCGAGTGTAACGATAAGTG+CGG 0.716852 8_1:-57292555 Msa1203230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTGTAGTTTACAATTAA+TGG + chr8_1:57292482-57292501 None:intergenic 15.0%
!! TGGCATTTAAAAAGAAAAAT+TGG - chr8_1:57292211-57292230 Msa1203230:intron 20.0%
!!! ATTTTAGCATATTCTAGATA+TGG + chr8_1:57292553-57292572 None:intergenic 20.0%
!! GATAAGACAAAAAATTAACA+TGG - chr8_1:57293263-57293282 Msa1203230:intron 20.0%
!!! GCAATTTGTTCATTTTTAAT+TGG - chr8_1:57293287-57293306 Msa1203230:intron 20.0%
!!! CTACACATTTAATAACTTTT+TGG + chr8_1:57293400-57293419 None:intergenic 20.0%
!! ATAGACTACTTTAAACTTAA+CGG - chr8_1:57293482-57293501 Msa1203230:CDS 20.0%
!! TTGTATTTAACACATTAATC+AGG + chr8_1:57293509-57293528 None:intergenic 20.0%
! CGAATATGATATATCGAAAA+TGG - chr8_1:57291145-57291164 Msa1203230:three_prime_UTR 25.0%
! ATTCAAATATTTGTAGAACC+TGG - chr8_1:57291308-57291327 Msa1203230:three_prime_UTR 25.0%
!! TTTCTTTTTGTAAGAGACAT+TGG - chr8_1:57291525-57291544 Msa1203230:intron 25.0%
! AATGCTGTTAAGGAAAAATT+AGG - chr8_1:57291800-57291819 Msa1203230:intron 25.0%
! ATGCTGTTAAGGAAAAATTA+GGG - chr8_1:57291801-57291820 Msa1203230:intron 25.0%
! ATGATCAAACTGTAATGATA+CGG - chr8_1:57292050-57292069 Msa1203230:intron 25.0%
!!! TATGTAGTTGTGTTTTGTTA+AGG - chr8_1:57292137-57292156 Msa1203230:CDS 25.0%
! AATAGCAGGTTAAATATTGT+CGG + chr8_1:57292288-57292307 None:intergenic 25.0%
!! ATACCTTTTTGATGAAGAAA+AGG - chr8_1:57292380-57292399 Msa1203230:intron 25.0%
! ATGAAGAAAAGGACATATTT+GGG - chr8_1:57292391-57292410 Msa1203230:intron 25.0%
!! TCCTAACATATTCATTTTGT+AGG - chr8_1:57292572-57292591 Msa1203230:CDS 25.0%
! ACCTACAAAATGAATATGTT+AGG + chr8_1:57292576-57292595 None:intergenic 25.0%
! TGTAAGATGTAAATTCTACT+AGG + chr8_1:57292623-57292642 None:intergenic 25.0%
!!! TAACTAATTTTTTCCAATGC+TGG - chr8_1:57292678-57292697 Msa1203230:intron 25.0%
! AAATTTCTCTACAAAACTTC+AGG - chr8_1:57292701-57292720 Msa1203230:intron 25.0%
! GCTATATTTGGTATTAAAAC+AGG + chr8_1:57293098-57293117 None:intergenic 25.0%
!!! GCAATTTTCTTTGCTATATT+TGG + chr8_1:57293110-57293129 None:intergenic 25.0%
! TAGTAGAATCAATGACATAT+CGG + chr8_1:57293195-57293214 None:intergenic 25.0%
! TTATTTCCTTGAACATAAGA+TGG - chr8_1:57293332-57293351 Msa1203230:CDS 25.0%
! GCTATTTACAACTAAATGAT+TGG - chr8_1:57293555-57293574 Msa1203230:CDS 25.0%
! ATTTACAACTAAATGATTGG+TGG - chr8_1:57293558-57293577 Msa1203230:CDS 25.0%
!! AACATTTAAAGTGTCCAATA+AGG - chr8_1:57294013-57294032 Msa1203230:CDS 25.0%
! CACATACATAATTTCCTTAT+TGG + chr8_1:57294030-57294049 None:intergenic 25.0%
! TATGTATGTGTAACATTGAA+TGG - chr8_1:57294040-57294059 Msa1203230:CDS 25.0%
! AATAATACTTCGATTCACAA+AGG + chr8_1:57294127-57294146 None:intergenic 25.0%
AGTCTGATATAGAAAACCAA+AGG - chr8_1:57291204-57291223 Msa1203230:three_prime_UTR 30.0%
GTCTGATATAGAAAACCAAA+GGG - chr8_1:57291205-57291224 Msa1203230:three_prime_UTR 30.0%
GTATATATTGCTACCAATTG+TGG + chr8_1:57291393-57291412 None:intergenic 30.0%
TACAAAAAGAAAATCCAGGA+CGG + chr8_1:57291517-57291536 None:intergenic 30.0%
CTCTTACAAAAAGAAAATCC+AGG + chr8_1:57291521-57291540 None:intergenic 30.0%
! TGATAATGAGAATGCTGTTA+AGG - chr8_1:57291790-57291809 Msa1203230:intron 30.0%
!! GTTTTGTTAAGGAGCTAAAT+CGG - chr8_1:57292148-57292167 Msa1203230:CDS 30.0%
! ACTCACAAGAATACAGATTT+TGG - chr8_1:57292191-57292210 Msa1203230:intron 30.0%
ATAGCAGGTTAAATATTGTC+GGG + chr8_1:57292287-57292306 None:intergenic 30.0%
! TGTCCTTTTCTTCATCAAAA+AGG + chr8_1:57292386-57292405 None:intergenic 30.0%
GATGAAGAAAAGGACATATT+TGG - chr8_1:57292390-57292409 Msa1203230:intron 30.0%
TGTAAATGGTCGAATCATAT+TGG - chr8_1:57292443-57292462 Msa1203230:intron 30.0%
TAACATATTCAGAACAGCAT+GGG + chr8_1:57292513-57292532 None:intergenic 30.0%
TTAACATATTCAGAACAGCA+TGG + chr8_1:57292514-57292533 None:intergenic 30.0%
!! TTTCTTCCTTTTTACTGACT+TGG - chr8_1:57293072-57293091 Msa1203230:intron 30.0%
AGTAGAATCAATGACATATC+GGG + chr8_1:57293194-57293213 None:intergenic 30.0%
!! GTCATTGATTCTACTACATA+TGG - chr8_1:57293199-57293218 Msa1203230:intron 30.0%
!! TTTTAATTGGCAACATCGTT+AGG - chr8_1:57293300-57293319 Msa1203230:CDS 30.0%
GATTACAGAGTTATTGTAGA+GGG - chr8_1:57293622-57293641 Msa1203230:CDS 30.0%
GATTGTAAGCATACACATAT+CGG - chr8_1:57293649-57293668 Msa1203230:CDS 30.0%
! GCAGTAACTTGTAACAATAA+TGG + chr8_1:57293750-57293769 None:intergenic 30.0%
ACAACAACAGAAAAATGTTG+AGG + chr8_1:57293942-57293961 None:intergenic 30.0%
! TTCAATGTGTCTCATCTTTT+AGG + chr8_1:57294084-57294103 None:intergenic 30.0%
GAAATGATCTCGTATAGCAA+TGG - chr8_1:57291254-57291273 Msa1203230:three_prime_UTR 35.0%
ATAGCAATGGAACAGTATCA+AGG - chr8_1:57291267-57291286 Msa1203230:three_prime_UTR 35.0%
ACAAAAAGAAAATCCAGGAC+GGG + chr8_1:57291516-57291535 None:intergenic 35.0%
CTTTCCTCTTTAATGTACGA+CGG + chr8_1:57291586-57291605 None:intergenic 35.0%
AGGAAAGCTGAAGAAAATTG+CGG - chr8_1:57291599-57291618 Msa1203230:intron 35.0%
GAGATGTTCTTTGCAAAGAA+AGG + chr8_1:57291719-57291738 None:intergenic 35.0%
TTCTTTGCAAAGAACATCTC+AGG - chr8_1:57291719-57291738 Msa1203230:intron 35.0%
AGATCTACTACACATATCAC+AGG + chr8_1:57291884-57291903 None:intergenic 35.0%
ATGTATATCTTCCTAAGCCT+TGG - chr8_1:57291939-57291958 Msa1203230:intron 35.0%
TGTATATCTTCCTAAGCCTT+GGG - chr8_1:57291940-57291959 Msa1203230:intron 35.0%
!! AAGAATTGGCTTTGTCACAT+AGG + chr8_1:57291975-57291994 None:intergenic 35.0%
CTACGCAATTGATGAAGAAT+TGG + chr8_1:57291989-57292008 None:intergenic 35.0%
GAAAAATCACTTCATCCTTG+TGG - chr8_1:57292254-57292273 Msa1203230:intron 35.0%
!!! TAACCTGCTATTTTGTTAGC+AGG - chr8_1:57292296-57292315 Msa1203230:CDS 35.0%
AAATGGTCGAATCATATTGG+AGG - chr8_1:57292446-57292465 Msa1203230:intron 35.0%
TGTAGAGAAATTTCCAGCAT+TGG + chr8_1:57292694-57292713 None:intergenic 35.0%
TTCTCTACAAAACTTCAGGA+AGG - chr8_1:57292705-57292724 Msa1203230:intron 35.0%
CCAAACAGAATATTGCAGAA+CGG - chr8_1:57292777-57292796 Msa1203230:intron 35.0%
GGTCTTTATGACAGAGAAAA+AGG - chr8_1:57292818-57292837 Msa1203230:intron 35.0%
CTTTATGACAGAGAAAAAGG+TGG - chr8_1:57292821-57292840 Msa1203230:intron 35.0%
!! ACGTTTGTTATCTGATTCAC+AGG - chr8_1:57292899-57292918 Msa1203230:CDS 35.0%
!! CGTTTGTTATCTGATTCACA+GGG - chr8_1:57292900-57292919 Msa1203230:CDS 35.0%
TTATCTGATTCACAGGGATT+CGG - chr8_1:57292906-57292925 Msa1203230:CDS 35.0%
CAAAAGAAGAGATTACGTCT+TGG + chr8_1:57293041-57293060 None:intergenic 35.0%
TGCTAACCATATGAGTAGAT+TGG - chr8_1:57293156-57293175 Msa1203230:intron 35.0%
GTAGAATCAATGACATATCG+GGG + chr8_1:57293193-57293212 None:intergenic 35.0%
TGTCTAGGTTCATCAATAAC+AGG - chr8_1:57293227-57293246 Msa1203230:intron 35.0%
CCAAAACCATCTTATGTTCA+AGG + chr8_1:57293341-57293360 None:intergenic 35.0%
! CCTTGAACATAAGATGGTTT+TGG - chr8_1:57293338-57293357 Msa1203230:CDS 35.0%
ACTCTGTAATCCACAAGATT+GGG + chr8_1:57293613-57293632 None:intergenic 35.0%
AACTCTGTAATCCACAAGAT+TGG + chr8_1:57293614-57293633 None:intergenic 35.0%
GGATTACAGAGTTATTGTAG+AGG - chr8_1:57293621-57293640 Msa1203230:CDS 35.0%
TAAGTGATGTGTGCATATAG+AGG + chr8_1:57293707-57293726 None:intergenic 35.0%
TTCAAAGATCCACAAAGACA+AGG + chr8_1:57293895-57293914 None:intergenic 35.0%
AAATGTTGAGGTTCTCGTAA+AGG + chr8_1:57293930-57293949 None:intergenic 35.0%
TGAATAGCCATTTCATCCAC+AGG + chr8_1:57291293-57291312 None:intergenic 40.0%
ATTTGTAGAACCTGGTACCA+AGG - chr8_1:57291316-57291335 Msa1203230:three_prime_UTR 40.0%
TCGAGCATATGTCAAAGACA+AGG - chr8_1:57291349-57291368 Msa1203230:three_prime_UTR 40.0%
CGAGCATATGTCAAAGACAA+GGG - chr8_1:57291350-57291369 Msa1203230:three_prime_UTR 40.0%
CATATGTCAAAGACAAGGGA+AGG - chr8_1:57291354-57291373 Msa1203230:three_prime_UTR 40.0%
AAAGTAAGCACTCCCATTTG+TGG - chr8_1:57291452-57291471 Msa1203230:CDS 40.0%
TGTACGACGGTTTGAATTTG+AGG + chr8_1:57291573-57291592 None:intergenic 40.0%
CAAACCGTCGTACATTAAAG+AGG - chr8_1:57291579-57291598 Msa1203230:intron 40.0%
AAAGCTGAAGAAAATTGCGG+TGG - chr8_1:57291602-57291621 Msa1203230:intron 40.0%
! TTGATCTCCAATGGACTTTC+CGG + chr8_1:57291668-57291687 None:intergenic 40.0%
ATTGGAGATCAATCCAGTGT+CGG - chr8_1:57291676-57291695 Msa1203230:CDS 40.0%
ATGCAATGACCTAAGCTTTG+CGG - chr8_1:57291847-57291866 Msa1203230:intron 40.0%
ACATAGGTAAACATCTCCCA+AGG + chr8_1:57291959-57291978 None:intergenic 40.0%
! ATTGCGTAGTCTTGATTCTG+AGG - chr8_1:57292000-57292019 Msa1203230:intron 40.0%
TTGTCGGGAAAAAAACCACA+AGG + chr8_1:57292272-57292291 None:intergenic 40.0%
GATCCTGCTAACAAAATAGC+AGG + chr8_1:57292302-57292321 None:intergenic 40.0%
TATACGTGATCACACGTTTC+AGG + chr8_1:57292363-57292382 None:intergenic 40.0%
GGACATATTTGGGAAACCAA+TGG - chr8_1:57292401-57292420 Msa1203230:intron 40.0%
ATATTTGGGAAACCAATGGC+CGG - chr8_1:57292405-57292424 Msa1203230:intron 40.0%
AGGTTCGCATACGATGTAAA+TGG - chr8_1:57292429-57292448 Msa1203230:intron 40.0%
! ATTCAGAACAGCATGGGTTA+GGG + chr8_1:57292507-57292526 None:intergenic 40.0%
TATTCAGAACAGCATGGGTT+AGG + chr8_1:57292508-57292527 None:intergenic 40.0%
TTCGAGTGTAACGATAAGTG+CGG - chr8_1:57292738-57292757 Msa1203230:intron 40.0%
CTGCAATATTCTGTTTGGAC+AGG + chr8_1:57292775-57292794 None:intergenic 40.0%
CCGTTCTGCAATATTCTGTT+TGG + chr8_1:57292780-57292799 None:intergenic 40.0%
GAACGGAGTTCGTGTTAAAT+TGG - chr8_1:57292794-57292813 Msa1203230:intron 40.0%
ACGTTTGTGTGTGAGTACAT+TGG - chr8_1:57292960-57292979 Msa1203230:CDS 40.0%
AACAGGCCAAGTCAGTAAAA+AGG + chr8_1:57293081-57293100 None:intergenic 40.0%
CTTCGACCAATCTACTCATA+TGG + chr8_1:57293165-57293184 None:intergenic 40.0%
! CATATGAGTAGATTGGTCGA+AGG - chr8_1:57293163-57293182 Msa1203230:intron 40.0%
CTACATATGGCAATGTGTCT+AGG - chr8_1:57293212-57293231 Msa1203230:intron 40.0%
GTGAACAGTTGACATCAGTA+CGG - chr8_1:57293776-57293795 Msa1203230:CDS 40.0%
GAAGGATATCCTTGTCTTTG+TGG - chr8_1:57293883-57293902 Msa1203230:CDS 40.0%
!! TGTGGATCTTTGAAATGCTG+AGG - chr8_1:57293901-57293920 Msa1203230:CDS 40.0%
TTAGACTGTCCAGTATGTTG+CGG - chr8_1:57293970-57293989 Msa1203230:CDS 40.0%
CAACTTATTCCGCAACATAC+TGG + chr8_1:57293982-57294001 None:intergenic 40.0%
ACACATTGAACATCTCGTTG+AGG - chr8_1:57294094-57294113 Msa1203230:CDS 40.0%
GCAAGCTAAGTGAATCCCTT+TGG + chr8_1:57291223-57291242 None:intergenic 45.0%
ATCAAGGCCTGTGGATGAAA+TGG - chr8_1:57291283-57291302 Msa1203230:three_prime_UTR 45.0%
CAGTGTGTGAGAACCACAAT+TGG - chr8_1:57291377-57291396 Msa1203230:exon 45.0%
CCAGTTGTACCTCCACAAAT+GGG + chr8_1:57291467-57291486 None:intergenic 45.0%
ACCAGTTGTACCTCCACAAA+TGG + chr8_1:57291468-57291487 None:intergenic 45.0%
! GACGGTTTGAATTTGAGGTC+TGG + chr8_1:57291568-57291587 None:intergenic 45.0%
! TTCCCAGAACCTGATTTGCA+TGG - chr8_1:57291625-57291644 Msa1203230:CDS 45.0%
GTCCATGCAAATCAGGTTCT+GGG + chr8_1:57291630-57291649 None:intergenic 45.0%
AGTCCATGCAAATCAGGTTC+TGG + chr8_1:57291631-57291650 None:intergenic 45.0%
! GAACCTGATTTGCATGGACT+TGG - chr8_1:57291631-57291650 Msa1203230:CDS 45.0%
ACACCAAGTCCATGCAAATC+AGG + chr8_1:57291637-57291656 None:intergenic 45.0%
!! GATTTGCATGGACTTGGTGT+TGG - chr8_1:57291637-57291656 Msa1203230:CDS 45.0%
GACACTGGATTGATCTCCAA+TGG + chr8_1:57291677-57291696 None:intergenic 45.0%
! ACATCATTGATGACCGACAC+TGG + chr8_1:57291692-57291711 None:intergenic 45.0%
AAAATTAGGGTCGTCGCGAA+AGG - chr8_1:57291814-57291833 Msa1203230:intron 45.0%
TTGATTCTGCCGCAAAGCTT+AGG + chr8_1:57291859-57291878 None:intergenic 45.0%
GTAAACATCTCCCAAGGCTT+AGG + chr8_1:57291953-57291972 None:intergenic 45.0%
TACATCGTATGCGAACCTTC+CGG + chr8_1:57292427-57292446 None:intergenic 45.0%
CGGAGTTCGTGTTAAATTGG+AGG - chr8_1:57292797-57292816 Msa1203230:intron 45.0%
ATTCACAGGGATTCGGAGTA+AGG - chr8_1:57292913-57292932 Msa1203230:CDS 45.0%
TTCACAGGGATTCGGAGTAA+GGG - chr8_1:57292914-57292933 Msa1203230:CDS 45.0%
!!! TGGTGAAGTTTTAGAGCAGC+AGG - chr8_1:57292980-57292999 Msa1203230:intron 45.0%
!!! TGAAGTTTTAGAGCAGCAGG+AGG - chr8_1:57292983-57293002 Msa1203230:intron 45.0%
CAGAGTTATTGTAGAGGGCA+CGG - chr8_1:57293627-57293646 Msa1203230:CDS 45.0%
TATGACTATGAGCCTGTGCT+CGG - chr8_1:57293859-57293878 Msa1203230:CDS 45.0%
TGGAACAGTATCAAGGCCTG+TGG - chr8_1:57291274-57291293 Msa1203230:three_prime_UTR 50.0%
CATTGTCGATCCTTGGTACC+AGG + chr8_1:57291329-57291348 None:intergenic 50.0%
TGCTCGACATTGTCGATCCT+TGG + chr8_1:57291336-57291355 None:intergenic 50.0%
GTAAGCACTCCCATTTGTGG+AGG - chr8_1:57291455-57291474 Msa1203230:CDS 50.0%
! CCCATTTGTGGAGGTACAAC+TGG - chr8_1:57291464-57291483 Msa1203230:CDS 50.0%
! TGTGGAGGTACAACTGGTTC+TGG - chr8_1:57291470-57291489 Msa1203230:intron 50.0%
! TGTAAGTATCGTTCCCGTCC+TGG - chr8_1:57291500-57291519 Msa1203230:intron 50.0%
ACATTGGCACAAAGCCGAGA+CGG - chr8_1:57291541-57291560 Msa1203230:intron 50.0%
GGCGAAATGCTCAAGCTTTC+TGG - chr8_1:57291740-57291759 Msa1203230:intron 50.0%
CAGCTGTTCACCCAATCTTG+TGG - chr8_1:57293600-57293619 Msa1203230:CDS 50.0%
CATTGGCACAAAGCCGAGAC+GGG - chr8_1:57291542-57291561 Msa1203230:intron 55.0%
! ATTTGAGGTCTGGCCCGTCT+CGG + chr8_1:57291558-57291577 None:intergenic 55.0%
!! GGACTTGGTGTTGGCACATC+CGG - chr8_1:57291646-57291665 Msa1203230:CDS 55.0%
GGCACATCCGGAAAGTCCAT+TGG - chr8_1:57291658-57291677 Msa1203230:CDS 55.0%
TTGGGAAACCAATGGCCGGA+AGG - chr8_1:57292409-57292428 Msa1203230:intron 55.0%
TATGCGAACCTTCCGGCCAT+TGG + chr8_1:57292420-57292439 None:intergenic 55.0%
!! GCTGGCGAAGCTATTTTGCG+TGG - chr8_1:57292936-57292955 Msa1203230:CDS 55.0%
TATGAGCCTGTGCTCGGAGA+AGG - chr8_1:57293865-57293884 Msa1203230:CDS 55.0%
GGATATCCTTCTCCGAGCAC+AGG + chr8_1:57293874-57293893 None:intergenic 55.0%
CAGGGATTCGGAGTAAGGGC+TGG - chr8_1:57292918-57292937 Msa1203230:CDS 60.0%
! CAGGAGGCACACAACAGACG+CGG - chr8_1:57292999-57293018 Msa1203230:intron 60.0%
AGGCACACAACAGACGCGGA+AGG - chr8_1:57293003-57293022 Msa1203230:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 57291101 57294214 57291101 ID=Msa1203230;Name=Msa1203230
chr8_1 mRNA 57291101 57294214 57291101 ID=Msa1203230-mRNA-1;Parent=Msa1203230;Name=Msa1203230-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|1|0.85|1|0.83|0.85|7|293|534
chr8_1 exon 57291101 57291486 57291101 ID=Msa1203230-mRNA-1:exon:18684;Parent=Msa1203230-mRNA-1
chr8_1 exon 57291625 57291712 57291625 ID=Msa1203230-mRNA-1:exon:18683;Parent=Msa1203230-mRNA-1
chr8_1 exon 57292067 57292198 57292067 ID=Msa1203230-mRNA-1:exon:18682;Parent=Msa1203230-mRNA-1
chr8_1 exon 57292291 57292394 57292291 ID=Msa1203230-mRNA-1:exon:18681;Parent=Msa1203230-mRNA-1
chr8_1 exon 57292476 57292592 57292476 ID=Msa1203230-mRNA-1:exon:18680;Parent=Msa1203230-mRNA-1
chr8_1 exon 57292848 57292997 57292848 ID=Msa1203230-mRNA-1:exon:18679;Parent=Msa1203230-mRNA-1
chr8_1 exon 57293294 57294214 57293294 ID=Msa1203230-mRNA-1:exon:18678;Parent=Msa1203230-mRNA-1
chr8_1 CDS 57293294 57294214 57293294 ID=Msa1203230-mRNA-1:cds;Parent=Msa1203230-mRNA-1
chr8_1 CDS 57292848 57292997 57292848 ID=Msa1203230-mRNA-1:cds;Parent=Msa1203230-mRNA-1
chr8_1 CDS 57292476 57292592 57292476 ID=Msa1203230-mRNA-1:cds;Parent=Msa1203230-mRNA-1
chr8_1 CDS 57292291 57292394 57292291 ID=Msa1203230-mRNA-1:cds;Parent=Msa1203230-mRNA-1
chr8_1 CDS 57292067 57292198 57292067 ID=Msa1203230-mRNA-1:cds;Parent=Msa1203230-mRNA-1
chr8_1 CDS 57291625 57291712 57291625 ID=Msa1203230-mRNA-1:cds;Parent=Msa1203230-mRNA-1
chr8_1 CDS 57291394 57291486 57291394 ID=Msa1203230-mRNA-1:cds;Parent=Msa1203230-mRNA-1
chr8_1 three_prime_UTR 57291101 57291393 57291101 ID=Msa1203230-mRNA-1:three_prime_utr;Parent=Msa1203230-mRNA-1
Gene Sequence

>Msa1203230

ATGGCAATGCTTCATAATGAAGAACATATTTGCGTTGTAAATCGCGAATATGATATATCGAAAATGGATGATGAACTCAGCGACAGTTCAGTTGTAATGAAAGAGTCTGATATAGAAAACCAAAGGGATTCACTTAGCTTGCAAGAATCTACAGAAATGATCTCGTATAGCAATGGAACAGTATCAAGGCCTGTGGATGAAATGGCTATTCAAATATTTGTAGAACCTGGTACCAAGGATCGACAATGTCGAGCATATGTCAAAGACAAGGGAAGGCAGTGTGTGAGAACCACAATTGGTAGCAATATATACTGTTGTGCTCATTTCTCAAACAAAAGAGAAAGACGTCTTAAAGTAAGCACTCCCATTTGTGGAGGTACAACTGGTTCTGGTAATAGCTGTAAGTATCGTTCCCGTCCTGGATTTTCTTTTTGTAAGAGACATTGGCACAAAGCCGAGACGGGCCAGACCTCAAATTCAAACCGTCGTACATTAAAGAGGAAAGCTGAAGAAAATTGCGGTGGTTCCCAGAACCTGATTTGCATGGACTTGGTGTTGGCACATCCGGAAAGTCCATTGGAGATCAATCCAGTGTCGGTCATCAATGATGTTGATCCTTTCTTTGCAAAGAACATCTCAGGCGAAATGCTCAAGCTTTCTGGTAATGATCATAATGAAGACTCTTGTATTGATAATGAGAATGCTGTTAAGGAAAAATTAGGGTCGTCGCGAAAGGTTATAGTGTTATGCAATGACCTAAGCTTTGCGGCAGAATCAACTCCTGTGATATGTGTAGTAGATCTACAAGTACTAAATTATCTTTGTGAGCAAGAGAGATATGTATATCTTCCTAAGCCTTGGGAGATGTTTACCTATGTGACAAAGCCAATTCTTCATCAATTGCGTAGTCTTGATTCTGAGGATCTGCAACTGTCTTGTAATTGCTTATATTCTACTTGCTGTCCTGAAACGTGTGATCACGTATACCTTTTTGATGAAGAAAAGGACATATTTGGGAAACCAATGGCCGGAAGGTTCGCATACGATGTAAATGGTCGAATCATATTGGAGGAAGGTAGTTTTGTCTTCGAGTGTAACGATAAGTGCGGATGCAATAAAACCTGTCCAAACAGAATATTGCAGAACGGAGTTCGTGTTAAATTGGAGGTCTTTATGACAGAGAAAAAGGGATTCGGAGTAAGGGCTGGCGAAGCTATTTTGCGTGGCACGTTTGTGTGTGAGTACATTGGTGAAGTTTTAGAGCAGCAGGAGGCACACAACAGACGCGGAAGCAAAGAAAATTGCAGTTATTTCTTAGACATTGATGCTCGTGCTAACCATATGAGTAGATTGGTCGAAGGACATCCCCGATATGTCATTGATTCTACTACATATGGCAATGTGTCTAGGTTCATCAATAACAGCTGTTCACCCAATCTTGTGGATTACAGAGTTATTGTAGAGGGCACGGATTGTAAGCATACACATATCGGTCTTTACGCAAGTCGAGATATTGCTTTGCATGAAGAATTGACATATAATTATGACTATGAGCCTGTGCTCGGAGAAGGATATCCTTGTCTTTGTGGATCTTTGAAATGCTGA
Protein sequence

>Msa1203230

MAMLHNEEHICVVNREYDISKMDDELSDSSVVMKESDIENQRDSLSLQESTEMISYSNGTVSRPVDEMAIQIFVEPGTKDRQCRAYVKDKGRQCVRTTIGSNIYCCAHFSNKRERRLKVSTPICGGTTGSGNSCKYRSRPGFSFCKRHWHKAETGQTSNSNRRTLKRKAEENCGGSQNLICMDLVLAHPESPLEINPVSVINDVDPFFAKNISGEMLKLSGNDHNEDSCIDNENAVKEKLGSSRKVIVLCNDLSFAAESTPVICVVDLQVLNYLCEQERYVYLPKPWEMFTYVTKPILHQLRSLDSEDLQLSCNCLYSTCCPETCDHVYLFDEEKDIFGKPMAGRFAYDVNGRIILEEGSFVFECNDKCGCNKTCPNRILQNGVRVKLEVFMTEKKGFGVRAGEAILRGTFVCEYIGEVLEQQEAHNRRGSKENCSYFLDIDARANHMSRLVEGHPRYVIDSTTYGNVSRFINNSCSPNLVDYRVIVEGTDCKHTHIGLYASRDIALHEELTYNYDYEPVLGEGYPCLCGSLKC*