AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1208520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1208520 MtrunA17_Chr4g0058011 96.690 574 16 2 1 572 1 573 0.0 1141
Msa1208520 MtrunA17_Chr3g0116431 54.383 559 185 16 21 568 12 511 0.0 555
Msa1208520 MtrunA17_Chr7g0249221 37.701 374 186 12 229 571 27 384 1.38e-68 228
Msa1208520 MtrunA17_Chr5g0438891 38.272 324 164 13 229 536 36 339 9.83e-65 217
Msa1208520 MtrunA17_Chr2g0286151 34.097 349 179 11 229 536 44 382 6.46e-51 182
Msa1208520 MtrunA17_Chr1g0195891 33.540 322 167 13 222 510 39 346 9.92e-48 170
Msa1208520 MtrunA17_Chr1g0195891 41.880 117 65 1 457 570 91 207 7.18e-22 97.4
Msa1208520 MtrunA17_Chr8g0356241 30.641 359 152 10 213 532 174 474 9.73e-45 166
Msa1208520 MtrunA17_Chr8g0356241 35.714 168 65 4 229 353 309 476 8.59e-25 108
Msa1208520 MtrunA17_Chr8g0356241 48.780 82 37 1 452 533 185 261 1.24e-17 86.3
Msa1208520 MtrunA17_Chr4g0066941 32.738 336 177 12 229 532 43 361 8.09e-40 152
Msa1208520 MtrunA17_Chr4g0066941 29.341 334 192 9 228 532 87 405 7.95e-34 135
Msa1208520 MtrunA17_Chr4g0066941 40.777 103 53 1 457 559 88 182 6.39e-19 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1208520 AT3G48440.1 58.610 331 125 7 210 531 90 417 3.07e-134 399
Msa1208520 AT3G48440.1 47.561 82 36 3 228 307 342 418 1.46e-14 76.6
Msa1208520 AT3G48440.1 29.268 164 62 5 456 571 106 263 2.20e-12 69.7
Msa1208520 AT5G63260.1 54.121 364 149 8 212 566 79 433 4.28e-124 372
Msa1208520 AT5G63260.2 52.116 378 151 8 212 566 79 449 1.46e-122 369
Msa1208520 AT3G02830.2 42.059 340 137 12 226 532 14 326 5.08e-72 236
Msa1208520 AT3G02830.2 44.118 102 56 1 457 557 62 163 1.28e-21 97.4
Msa1208520 AT3G02830.1 42.059 340 137 12 226 532 34 346 5.67e-72 236
Msa1208520 AT3G02830.1 44.118 102 56 1 457 557 82 183 1.67e-21 97.4
Msa1208520 AT5G16540.3 40.909 308 147 9 229 532 18 294 2.65e-66 220
Msa1208520 AT5G16540.3 39.474 114 56 1 457 557 63 176 3.46e-19 89.7
Msa1208520 AT5G16540.3 41.250 80 42 2 228 306 62 137 4.57e-12 68.2
Msa1208520 AT5G16540.1 40.909 308 147 9 229 532 39 315 3.52e-66 220
Msa1208520 AT5G16540.1 39.474 114 56 1 457 557 84 197 3.79e-19 90.1
Msa1208520 AT5G16540.1 41.250 80 42 2 228 306 83 158 4.46e-12 68.6
Msa1208520 AT3G06410.1 38.872 337 163 11 229 531 51 378 4.41e-64 217
Msa1208520 AT3G06410.1 49.367 79 38 1 456 532 96 174 2.04e-17 85.5
Msa1208520 AT3G06410.1 41.772 79 46 0 455 533 49 127 3.66e-15 78.6
Msa1208520 AT3G06410.1 33.333 93 58 2 215 306 289 378 1.88e-11 67.0
Msa1208520 AT2G47850.1 39.420 345 159 14 225 536 38 365 3.81e-63 215
Msa1208520 AT2G47850.3 39.420 345 159 14 225 536 38 365 3.81e-63 215
Msa1208520 AT5G18550.1 37.764 331 170 10 229 531 48 370 1.34e-62 213
Msa1208520 AT5G18550.1 40.179 112 50 2 457 551 94 205 6.08e-18 87.4
Msa1208520 AT5G18550.1 44.872 78 43 0 455 532 46 123 6.98e-17 84.0
Msa1208520 AT5G18550.4 37.764 331 170 10 229 531 48 370 2.01e-62 213
Msa1208520 AT5G18550.4 40.179 112 50 2 457 551 94 205 7.47e-18 87.0
Msa1208520 AT5G18550.4 44.304 79 44 0 455 533 46 124 8.16e-17 83.6
Msa1208520 AT5G18550.3 38.066 331 169 10 229 531 16 338 3.19e-62 211
Msa1208520 AT5G18550.3 40.179 112 50 2 457 551 62 173 1.13e-17 86.3
Msa1208520 AT5G18550.3 44.304 79 44 0 455 533 14 92 1.30e-16 82.8
Msa1208520 AT5G16540.2 39.935 308 143 11 229 532 39 308 3.38e-59 201
Msa1208520 AT5G16540.2 39.474 114 56 1 457 557 84 197 2.80e-19 90.5
Msa1208520 AT5G16540.2 41.250 80 42 2 228 306 83 158 4.65e-12 68.2
Msa1208520 AT1G04990.1 36.000 325 170 11 229 543 44 340 3.81e-59 202
Msa1208520 AT1G04990.6 36.000 325 170 11 229 543 44 340 3.81e-59 202
Msa1208520 AT1G04990.2 36.000 325 170 11 229 543 44 340 3.81e-59 202
Msa1208520 AT5G18550.2 35.542 332 163 11 229 531 48 357 3.54e-56 196
Msa1208520 AT5G18550.2 40.179 112 50 2 457 551 94 205 5.36e-18 87.4
Msa1208520 AT5G18550.2 44.872 78 43 0 455 532 46 123 6.37e-17 84.0
Msa1208520 AT2G32930.3 34.234 333 184 10 229 547 14 325 5.71e-54 189
Msa1208520 AT2G32930.2 34.234 333 184 10 229 547 41 352 6.73e-54 190
Msa1208520 AT5G16540.4 38.516 283 139 9 229 507 18 269 3.72e-51 177
Msa1208520 AT5G16540.4 39.474 114 56 1 457 557 63 176 1.33e-19 89.4
Msa1208520 AT5G16540.4 41.250 80 42 2 228 306 62 137 2.88e-12 67.8
Msa1208520 AT1G04990.5 33.846 325 157 12 229 543 44 320 2.01e-50 178
Msa1208520 AT2G32930.1 33.934 333 181 11 229 547 41 348 2.03e-50 180
Msa1208520 AT2G47850.2 35.455 330 167 12 225 536 38 339 6.31e-47 171
Msa1208520 AT3G12680.1 30.588 340 140 9 228 532 221 499 2.07e-44 165
Msa1208520 AT3G12680.1 33.939 165 69 3 229 353 337 501 7.31e-24 105
Msa1208520 AT3G12680.1 30.380 237 98 5 323 533 172 367 1.26e-22 102
Msa1208520 AT3G12680.1 30.732 205 81 6 208 351 242 446 4.86e-22 100
Msa1208520 AT1G04990.3 35.926 270 141 10 284 543 12 259 4.74e-44 159
Msa1208520 AT1G04990.3 41.333 75 42 1 279 351 178 252 3.24e-11 65.5
Msa1208520 AT2G47850.4 40.637 251 105 12 317 536 6 243 1.19e-39 148
Msa1208520 AT2G47850.4 41.463 82 46 1 272 351 158 239 2.34e-16 81.3
Msa1208520 AT2G47850.4 40.244 82 44 2 229 309 164 241 2.54e-12 68.9
Msa1208520 AT1G04990.4 33.333 270 128 11 284 543 12 239 1.83e-35 135
Msa1208520 AT1G48195.1 64.935 77 27 0 455 531 4 80 9.91e-33 120
Msa1208520 AT1G48195.1 43.836 73 39 1 280 350 8 80 7.48e-14 67.4

Find 213 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTATGGAATTTGCAAATT+TGG 0.102331 8_1:-66649082 Msa1208520:CDS
TCAGGTTCACCAGGCCTTTC+TGG 0.111248 8_1:+66649470 None:intergenic
GATTGATTATCTGTTATTTC+TGG 0.157583 8_1:-66648710 Msa1208520:three_prime_UTR
AAAATCAATTTCTGCTATTA+GGG 0.196169 8_1:-66652575 Msa1208520:five_prime_UTR
TGCAGTTTCTTCATTAAAAC+TGG 0.219867 8_1:-66649446 Msa1208520:CDS
ATCTCTTATGTATTTATTAC+AGG 0.225819 8_1:-66648750 Msa1208520:three_prime_UTR
GCTGGTTATGGTGCTGAATA+TGG 0.227407 8_1:-66651942 Msa1208520:CDS
ATTAGGGGAAGTGCGCTTTC+TGG 0.242070 8_1:+66649037 None:intergenic
AGTTAAATGCTTCTGCCATT+TGG 0.251143 8_1:-66648489 Msa1208520:three_prime_UTR
GAAAATAAATAACCTGGTTT+TGG 0.252801 8_1:+66651745 None:intergenic
GTCTGGCCCGCGTTCTCTTC+TGG 0.256661 8_1:+66650912 None:intergenic
ATCCATTCCAATCAGAAGTT+TGG 0.261285 8_1:+66649812 None:intergenic
AGAGCCAGTGCGCATGTAAT+AGG 0.276877 8_1:+66650041 None:intergenic
AACTTTGCAACCCGATTCTT+TGG 0.276880 8_1:+66649386 None:intergenic
TCCTTTGGATTAAAGTTAAC+TGG 0.283524 8_1:-66648686 Msa1208520:three_prime_UTR
CGCACTGGCTCTTGTAAGTT+TGG 0.291837 8_1:-66650030 Msa1208520:CDS
TCTGTTATTTCTGGTTCCTT+TGG 0.294201 8_1:-66648701 Msa1208520:three_prime_UTR
GATGGTGGTGGTGCTGGTTA+TGG 0.294963 8_1:-66651954 Msa1208520:CDS
AGAAAGTTAAGTTCTGAAAT+TGG 0.306141 8_1:+66650195 None:intergenic
GGTGGTGATGGTGGTGGTGC+TGG 0.307134 8_1:-66651960 Msa1208520:CDS
GAGCCAGTGCGCATGTAATA+GGG 0.307860 8_1:+66650042 None:intergenic
AAATAAAATGTATCATGTTT+AGG 0.310619 8_1:+66648844 None:intergenic
TCCATTCCAATCAGAAGTTT+GGG 0.314436 8_1:+66649813 None:intergenic
TAAACATTTGTTTCAATTGT+TGG 0.327844 8_1:+66649530 None:intergenic
GTTAAATGCTTCTGCCATTT+GGG 0.327957 8_1:-66648488 Msa1208520:three_prime_UTR
TGGATTAAAGTTAACTGGTT+TGG 0.329479 8_1:-66648681 Msa1208520:three_prime_UTR
AAGACTGGGAGTTGCAAGTT+TGG 0.332151 8_1:-66651807 Msa1208520:CDS
GTTATGGAATTTGCAAATTT+GGG 0.333323 8_1:-66649081 Msa1208520:CDS
CTGAAATTGATGATAAAGTT+TGG 0.348600 8_1:-66652265 Msa1208520:CDS
GCAAATTTAATCACCCCATT+AGG 0.348706 8_1:-66651776 Msa1208520:CDS
TGGGGTTATGGTGGTGGTGA+TGG 0.352887 8_1:-66651972 Msa1208520:CDS
GACTACAAATGCAGGCTGTT+AGG 0.359180 8_1:-66650959 Msa1208520:intron
AGGTCTGGAGGTTGTAAGTT+TGG 0.359978 8_1:-66650258 Msa1208520:CDS
GGTTATGGTGGTGGTGATGG+TGG 0.363462 8_1:-66651969 Msa1208520:CDS
TTCTGATTGGAATGGATATC+AGG 0.365728 8_1:-66649806 Msa1208520:intron
AATGAACAATCTTCAGCTTC+AGG 0.368842 8_1:+66651837 None:intergenic
ATTTCAGAACTTAACTTTCT+CGG 0.371138 8_1:-66650192 Msa1208520:CDS
TTAATGAAGAAACTGCATTC+AGG 0.373181 8_1:+66649452 None:intergenic
GTCCGAGTCCAGGCATCATT+AGG 0.374587 8_1:+66649020 None:intergenic
GATGGTTATGGTGACGGTTA+TGG 0.377832 8_1:-66651918 Msa1208520:CDS
TGGTAGAGATGCTGATGATT+GGG 0.379055 8_1:-66651991 Msa1208520:CDS
TGCTCGCACTATAGTCGTTA+TGG 0.385570 8_1:-66649097 Msa1208520:CDS
TCCGAGTCCAGGCATCATTA+GGG 0.386170 8_1:+66649021 None:intergenic
GTGGTAGAGATGCTGATGAT+TGG 0.386802 8_1:-66651992 Msa1208520:CDS
TTAGGGGAAGTGCGCTTTCT+GGG 0.387787 8_1:+66649038 None:intergenic
TTGCACTATGCACCGGCTAT+TGG 0.391636 8_1:+66648564 None:intergenic
GATGCTGATGATTGGGGTTA+TGG 0.395182 8_1:-66651984 Msa1208520:CDS
GCTGAATATGGGGATGGTTA+TGG 0.402292 8_1:-66651930 Msa1208520:CDS
ACTACAAATGCAGGCTGTTA+GGG 0.405099 8_1:-66650958 Msa1208520:intron
TTGCTCCCCAAACTTCTGAT+TGG 0.407376 8_1:-66649819 Msa1208520:CDS
AGAACCCAGTTGGGGTTCTT+CGG 0.410763 8_1:+66652487 None:intergenic
TCAGCTAATGCTCAGGTGGC+TGG 0.413776 8_1:-66648980 Msa1208520:CDS
TATGGTGGTGGTGATGGTGG+TGG 0.414901 8_1:-66651966 Msa1208520:CDS
CTGGTTATGGTGCTGAATAT+GGG 0.415399 8_1:-66651941 Msa1208520:CDS
AATGCTCAGGTGGCTGGGAT+GGG 0.415592 8_1:-66648974 Msa1208520:CDS
AATTTCACCATCCAAAGAAT+CGG 0.420180 8_1:-66649397 Msa1208520:CDS
CAACGCCGAAGAACCCCAAC+TGG 0.420728 8_1:-66652492 Msa1208520:CDS
GAACTCATCAATTCCCTTTG+AGG 0.425644 8_1:-66651860 Msa1208520:CDS
AGATGAAGAAGAATCTGTTA+AGG 0.426506 8_1:-66652123 Msa1208520:CDS
TCATGAGAAGTTGGATTTGA+AGG 0.428949 8_1:-66652369 Msa1208520:CDS
TAATGCTCAGGTGGCTGGGA+TGG 0.429440 8_1:-66648975 Msa1208520:CDS
TTGAACCTCAGAACCCAGTT+GGG 0.440942 8_1:+66652478 None:intergenic
CCGGCTATTGGTGGTAGTAC+TGG 0.442998 8_1:+66648576 None:intergenic
GGAGGATCTGATCCTCAATC+AGG 0.446882 8_1:-66649967 Msa1208520:CDS
ATAAGTTGTACCAGACGAAT+AGG 0.451170 8_1:+66650165 None:intergenic
AAACATTTGTTTCAATTGTT+GGG 0.452056 8_1:+66649531 None:intergenic
TTGTTCACACACACTGCCCC+TGG 0.452960 8_1:-66652714 Msa1208520:five_prime_UTR
GATGATTGGGGTTATGGTGG+TGG 0.453539 8_1:-66651978 Msa1208520:CDS
TTTGAAATGTGGAGGGAGAA+TGG 0.455545 8_1:-66652552 Msa1208520:exon
CGTTTGAAGTGTTTCCAGAA+AGG 0.459964 8_1:-66649484 Msa1208520:CDS
TGGCAGTATTATCAAAGGTC+TGG 0.460554 8_1:-66650273 Msa1208520:intron
TCAGATCCTCCGACAGTTGT+AGG 0.460793 8_1:+66649979 None:intergenic
TCTCGGCTTACCTATTCGTC+TGG 0.469076 8_1:-66650175 Msa1208520:intron
AACTGCAGGGAAAGAGTGAA+TGG 0.469321 8_1:+66648508 None:intergenic
TTTAAACTTCAAAACTCCAT+TGG 0.471019 8_1:+66648623 None:intergenic
TCTTCAGCTTCAGGCCTCAA+AGG 0.471838 8_1:+66651846 None:intergenic
GAAGAAAGGGTTGATGTTGA+TGG 0.473079 8_1:-66652074 Msa1208520:CDS
CCTCCGACAGTTGTAGGATC+AGG 0.473817 8_1:+66649985 None:intergenic
TGAGTAGGCGTAGGCATCAA+TGG 0.474024 8_1:+66649847 None:intergenic
ATTTCACCATCCAAAGAATC+GGG 0.474319 8_1:-66649396 Msa1208520:CDS
GATGAAGAAGAATCTGTTAA+GGG 0.476242 8_1:-66652122 Msa1208520:CDS
CTTTCTGGAAACACTTCAAA+CGG 0.476293 8_1:+66649485 None:intergenic
GCTCAGGTGGCTGGGATGGG+TGG 0.478265 8_1:-66648971 Msa1208520:CDS
TGCTATTAGGGTTTGAAATG+TGG 0.486682 8_1:-66652563 Msa1208520:five_prime_UTR
GCTGATGATTGGGGTTATGG+TGG 0.488921 8_1:-66651981 Msa1208520:CDS
CCTCAATCAGGGTATGGTAA+TGG 0.491280 8_1:-66649955 Msa1208520:CDS
TGAAGTAGTTTCCGATGAAA+GGG 0.495898 8_1:-66652291 Msa1208520:CDS
CAATAACCTTGCATTCTGTC+TGG 0.497455 8_1:+66650895 None:intergenic
GTGAAGTAGTTTCCGATGAA+AGG 0.497509 8_1:-66652292 Msa1208520:CDS
ATTTGTTGAGGGTGAAGAAA+GGG 0.497561 8_1:-66652087 Msa1208520:CDS
CATGATCCTCTCTGATAAGT+AGG 0.504294 8_1:+66649583 None:intergenic
AATTTCAGCACCCCTTTCAT+CGG 0.505143 8_1:+66652280 None:intergenic
GATTTGAAGGTTGAAGATGA+AGG 0.507972 8_1:-66652356 Msa1208520:CDS
GCATATGAATATGACCCAAA+TGG 0.509009 8_1:+66648474 None:intergenic
AGAATCTCTGAAGGGTGAAA+AGG 0.509352 8_1:-66652147 Msa1208520:CDS
TGGCAGAAGCATTTAACTGC+AGG 0.509551 8_1:+66648494 None:intergenic
CTTCAGCTTCAGGCCTCAAA+GGG 0.509655 8_1:+66651847 None:intergenic
CACTATGCACCGGCTATTGG+TGG 0.510349 8_1:+66648567 None:intergenic
AAGGTTGGGATACTAATAGT+TGG 0.510691 8_1:-66652043 Msa1208520:CDS
AAGGCAGGCCCTTGTCACTA+AGG 0.511305 8_1:+66649351 None:intergenic
CAGCTAATGCTCAGGTGGCT+GGG 0.512237 8_1:-66648979 Msa1208520:CDS
CCCCTAATGATGCCTGGACT+CGG 0.513603 8_1:-66649022 Msa1208520:CDS
TTGCAACCCGATTCTTTGGA+TGG 0.514387 8_1:+66649390 None:intergenic
TATGGTGACGGTTATGGCTA+TGG 0.516935 8_1:-66651912 Msa1208520:CDS
TGTAAGTACAACCACTCAAG+AGG 0.517355 8_1:-66650228 Msa1208520:CDS
TGAACGAGTTGGAGATGAAA+GGG 0.517944 8_1:-66652228 Msa1208520:CDS
AACTTACAGGTCTCAAAGGC+AGG 0.518963 8_1:+66649336 None:intergenic
TGATGGAGACAGCAAAGGTT+GGG 0.522384 8_1:-66652057 Msa1208520:CDS
GTAGGCATCAATGGAGCAAA+AGG 0.524117 8_1:+66649856 None:intergenic
TGCAAACTCAGCTAATGCTC+AGG 0.524400 8_1:-66648987 Msa1208520:CDS
AATTTGTTGAGGGTGAAGAA+AGG 0.527651 8_1:-66652088 Msa1208520:CDS
TAGGATTGTTGTCCGAGTCC+AGG 0.528151 8_1:+66649010 None:intergenic
TTCATGACATAAGTAGAAGA+TGG 0.528240 8_1:+66649557 None:intergenic
ACCAGTTAACTTTAATCCAA+AGG 0.529967 8_1:+66648685 None:intergenic
ACTGCAGGGAAAGAGTGAAT+GGG 0.532004 8_1:+66648509 None:intergenic
CCCCAAACTTCTGATTGGAA+TGG 0.532005 8_1:-66649814 Msa1208520:CDS
AATTTAATCACCCCATTAGG+AGG 0.533115 8_1:-66651773 Msa1208520:CDS
GAAGAAGACCATGAGGCGAC+AGG 0.533137 8_1:+66649898 None:intergenic
TTGATGGAGACAGCAAAGGT+TGG 0.534457 8_1:-66652058 Msa1208520:CDS
ACCGTCAGATCTCAATCAAA+CGG 0.540872 8_1:-66652426 Msa1208520:CDS
GGTGGAGAATGATGATCAAC+TGG 0.542231 8_1:+66652446 None:intergenic
TCATATGCATATGCCCCAGC+AGG 0.544866 8_1:-66648459 Msa1208520:three_prime_UTR
TGATACACCTCGTAGTGAAA+CGG 0.547266 8_1:+66649927 None:intergenic
TTATATGGGGAATCAGCAAA+GGG 0.549637 8_1:+66652681 None:intergenic
TTTATATGGGGAATCAGCAA+AGG 0.550047 8_1:+66652680 None:intergenic
TCTGATCCTCAATCAGGGTA+TGG 0.550275 8_1:-66649961 Msa1208520:CDS
AAAATCATTGCACTATGCAC+CGG 0.550723 8_1:+66648557 None:intergenic
CACAACAACCTGTCGCCTCA+TGG 0.551262 8_1:-66649906 Msa1208520:CDS
TCTTGTTCAACAGTTGCCAA+TGG 0.551816 8_1:-66648639 Msa1208520:three_prime_UTR
TTTAACGATGGTGAACGAGT+TGG 0.552952 8_1:-66652239 Msa1208520:CDS
GTGAACGAGTTGGAGATGAA+AGG 0.554304 8_1:-66652229 Msa1208520:CDS
CCATTACCATACCCTGATTG+AGG 0.554709 8_1:+66649955 None:intergenic
GCACTTCCCCTAATGATGCC+TGG 0.554943 8_1:-66649028 Msa1208520:CDS
TGTGGAGCTTCATGAGAAGT+TGG 0.556036 8_1:-66652378 Msa1208520:CDS
AGAAAGTGCTTAAATTTGTG+TGG 0.556500 8_1:-66648429 Msa1208520:three_prime_UTR
ATCCTCTCTGATAAGTAGGC+AGG 0.557199 8_1:+66649587 None:intergenic
TGGTATGGCAGTATTATCAA+AGG 0.558128 8_1:-66650278 Msa1208520:intron
GTAAGTTTGGATCGAACTGT+AGG 0.559636 8_1:-66650017 Msa1208520:CDS
GCAAAGGGAGTGAAGAAACC+AGG 0.560231 8_1:+66652696 None:intergenic
AGAAGAACCAGAAGAGAACG+CGG 0.561387 8_1:-66650919 Msa1208520:CDS
CAATCAGGGTATGGTAATGG+AGG 0.562537 8_1:-66649952 Msa1208520:CDS
AAAGTTTGGAACTTTAACGA+TGG 0.565585 8_1:-66652251 Msa1208520:CDS
AAAGTTTCGAACTTTAACGA+TGG 0.565585 8_1:-66652314 Msa1208520:CDS
CATCCTGATCCTACAACTGT+CGG 0.566670 8_1:-66649988 Msa1208520:CDS
AAGGAAGAGAAAAGCAGCGA+TGG 0.568512 8_1:-66651882 Msa1208520:CDS
GTTGAACCTCAGAACCCAGT+TGG 0.568812 8_1:+66652477 None:intergenic
GAGAATGTGAATGAAGAGCT+TGG 0.570679 8_1:-66652017 Msa1208520:CDS
TTAAAGTTAACTGGTTTGGA+TGG 0.570691 8_1:-66648677 Msa1208520:three_prime_UTR
GTGCTGTGAACCCTCTTGAG+TGG 0.572535 8_1:+66650217 None:intergenic
GCAGTTTCTTCATTAAAACT+GGG 0.573129 8_1:-66649445 Msa1208520:CDS
TGCCCCTATTACATGCGCAC+TGG 0.574720 8_1:-66650045 Msa1208520:CDS
GGGTGGTCAAATCTACAAGC+TGG 0.574834 8_1:+66649058 None:intergenic
GAAAATGAAGAATTTGTTGA+GGG 0.575745 8_1:-66652098 Msa1208520:CDS
CGCGGGCCAGACAGAATGCA+AGG 0.576542 8_1:-66650901 Msa1208520:intron
GTGAATGAAGAGCTTGGTGG+TGG 0.580195 8_1:-66652011 Msa1208520:CDS
CCCTTGTCACTAAGGTTGCA+AGG 0.581869 8_1:+66649359 None:intergenic
AAACTGCATTCAGGTTCACC+AGG 0.584269 8_1:+66649461 None:intergenic
GGTAGAGATGCTGATGATTG+GGG 0.586505 8_1:-66651990 Msa1208520:CDS
TATTAGGGTTTGAAATGTGG+AGG 0.590972 8_1:-66652560 Msa1208520:five_prime_UTR
TGGTTATGGTGCTGAATATG+GGG 0.591645 8_1:-66651940 Msa1208520:CDS
ACCGTTTGATTGAGATCTGA+CGG 0.592753 8_1:+66652425 None:intergenic
GAAGAACCAGAAGAGAACGC+GGG 0.593025 8_1:-66650918 Msa1208520:CDS
AATGCAGGCTGTTAGGGAGA+AGG 0.594662 8_1:-66650952 Msa1208520:intron
GAATGATGATGAACTTGCTG+TGG 0.596550 8_1:-66652396 Msa1208520:CDS
GGCAGAAGCATTTAACTGCA+GGG 0.596593 8_1:+66648495 None:intergenic
AGCATTAGCTGAGTTTGCAT+AGG 0.596874 8_1:+66648991 None:intergenic
GAAAGTGCTTAAATTTGTGT+GGG 0.597390 8_1:-66648428 None:intergenic
AGCCAGTGCGCATGTAATAG+GGG 0.597843 8_1:+66650043 None:intergenic
TCCTTGCAACCTTAGTGACA+AGG 0.599462 8_1:-66649360 Msa1208520:CDS
TATAGTGCGAGCAGACACTC+TGG 0.602814 8_1:+66649107 None:intergenic
CAGTTTCTTCATTAAAACTG+GGG 0.603026 8_1:-66649444 Msa1208520:CDS
TATGGGGATGGTTATGGTGA+CGG 0.603183 8_1:-66651924 Msa1208520:CDS
TTTGATGATGGCGAACGAGT+TGG 0.603613 8_1:-66652176 Msa1208520:CDS
GGTGGTAGTACTGGTTAGCA+CGG 0.604058 8_1:+66648585 None:intergenic
GCATAACTTACAGGTCTCAA+AGG 0.605332 8_1:+66649332 None:intergenic
AGAACCCCAACTGGGTTCTG+AGG 0.606153 8_1:-66652483 Msa1208520:CDS
GAAGTGTTTCCAGAAAGGCC+TGG 0.609811 8_1:-66649479 Msa1208520:CDS
TGGGGAGCAAGTCCTTGAGT+AGG 0.610371 8_1:+66649832 None:intergenic
ATTAGGGTTTGAAATGTGGA+GGG 0.610630 8_1:-66652559 Msa1208520:five_prime_UTR
CAGTATTATCAAAGGTCTGG+AGG 0.612968 8_1:-66650270 Msa1208520:CDS
TGGTGATGAAGAATCTCTGA+AGG 0.613878 8_1:-66652156 Msa1208520:CDS
TATGGTGCTGAATATGGGGA+TGG 0.616633 8_1:-66651936 Msa1208520:CDS
TGAACCTCAGAACCCAGTTG+GGG 0.617408 8_1:+66652479 None:intergenic
CTGTCTAAAAGCCTTTGTCA+AGG 0.619448 8_1:-66648919 Msa1208520:exon
TTATGGCTATGGTGATGAGA+AGG 0.619525 8_1:-66651901 Msa1208520:CDS
CCAGTACTACCACCAATAGC+CGG 0.624712 8_1:-66648576 Msa1208520:three_prime_UTR
GCAAGTCCTTGAGTAGGCGT+AGG 0.625756 8_1:+66649838 None:intergenic
AAACTCAGCTAATGCTCAGG+TGG 0.626361 8_1:-66648984 Msa1208520:CDS
TGAAAATGAAGAATTTGTTG+AGG 0.627596 8_1:-66652099 Msa1208520:CDS
CTGCAGGGAAAGAGTGAATG+GGG 0.627895 8_1:+66648510 None:intergenic
TTGATGCCTACGCCTACTCA+AGG 0.631915 8_1:-66649844 Msa1208520:CDS
GAGGATCTGATCCTCAATCA+GGG 0.641104 8_1:-66649966 Msa1208520:CDS
CAAAGGGAGTGAAGAAACCA+GGG 0.641898 8_1:+66652697 None:intergenic
CCGAGTCCAGGCATCATTAG+GGG 0.648980 8_1:+66649022 None:intergenic
AATCAGGGTATGGTAATGGA+GGG 0.653641 8_1:-66649951 Msa1208520:CDS
AGATAGAAGATCCTTGACAA+AGG 0.653962 8_1:+66648908 None:intergenic
CCTTGCAACCTTAGTGACAA+GGG 0.655446 8_1:-66649359 Msa1208520:CDS
AGAAAGATCACACACTGACG+CGG 0.662313 8_1:+66652621 None:intergenic
GAAGTAGTTTCCGATGAAAG+GGG 0.663972 8_1:-66652290 Msa1208520:CDS
AACGCCGAAGAACCCCAACT+GGG 0.666568 8_1:-66652491 Msa1208520:CDS
AAAGGGAGTGAAGAAACCAG+GGG 0.669089 8_1:+66652698 None:intergenic
GTAAGTACAACCACTCAAGA+GGG 0.671707 8_1:-66650227 Msa1208520:CDS
CTTTCTTGAAGAAGACCATG+AGG 0.682349 8_1:+66649891 None:intergenic
GGAGGGTCCGTTTCACTACG+AGG 0.682956 8_1:-66649934 Msa1208520:CDS
GATGTTGATGGAGACAGCAA+AGG 0.687704 8_1:-66652062 Msa1208520:CDS
CCATTCCAATCAGAAGTTTG+GGG 0.688247 8_1:+66649814 None:intergenic
CACCTGCCTACTTATCAGAG+AGG 0.690749 8_1:-66649589 Msa1208520:CDS
CCTGATCCTACAACTGTCGG+AGG 0.708304 8_1:-66649985 Msa1208520:CDS
GAACGAGTTGGAGATGAAAG+GGG 0.725208 8_1:-66652227 Msa1208520:CDS
AATGTGAATGAAGAGCTTGG+TGG 0.733698 8_1:-66652014 Msa1208520:CDS
GTTTGATTGAGATCTGACGG+TGG 0.735022 8_1:+66652428 None:intergenic
GGTGATGAAGAATCTCTGAA+GGG 0.735452 8_1:-66652155 Msa1208520:CDS
TTGTCACTAAGGTTGCAAGG+AGG 0.772375 8_1:+66649362 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTGATTTTTATCTTT+TGG - chr8_1:66650842-66650861 Msa1208520:intron 10.0%
!!! ATACATTTTATTTAACTTTA+TGG - chr8_1:66652306-66652325 Msa1208520:CDS 10.0%
!!! AAATATTCTTTTCTTTGTTT+TGG - chr8_1:66650152-66650171 Msa1208520:intron 15.0%
!! AAATAAAATGTATCATGTTT+AGG + chr8_1:66652299-66652318 None:intergenic 15.0%
!!! AGAAAAAAGGTTTTTATATG+GGG + chr8_1:66648475-66648494 None:intergenic 20.0%
!!! GAGAAAAAAGGTTTTTATAT+GGG + chr8_1:66648476-66648495 None:intergenic 20.0%
!!! TGAGAAAAAAGGTTTTTATA+TGG + chr8_1:66648477-66648496 None:intergenic 20.0%
!! TAACAAAAAAGTGAGAAAAA+AGG + chr8_1:66648488-66648507 None:intergenic 20.0%
!! AAAAATCAATTTCTGCTATT+AGG - chr8_1:66648564-66648583 Msa1208520:three_prime_UTR 20.0%
!! AAAATCAATTTCTGCTATTA+GGG - chr8_1:66648565-66648584 Msa1208520:three_prime_UTR 20.0%
!! AAAAATCACAATTCAACATT+AGG + chr8_1:66649650-66649669 None:intergenic 20.0%
!!! TAATGTTGAATTGTGATTTT+TGG - chr8_1:66649649-66649668 Msa1208520:intron 20.0%
!!! CCATTTTTTCAAATTATTAC+GGG + chr8_1:66649754-66649773 None:intergenic 20.0%
!!! GCCATTTTTTCAAATTATTA+CGG + chr8_1:66649755-66649774 None:intergenic 20.0%
!! ATTCCTTGATTAATAATTAC+TGG - chr8_1:66650584-66650603 Msa1208520:intron 20.0%
!!! TTGATTTTTATCTTTTGGTA+TGG - chr8_1:66650847-66650866 Msa1208520:intron 20.0%
!! GATATTATATATCTTCTCAA+TGG + chr8_1:66651003-66651022 None:intergenic 20.0%
!!! TTTAAAATGTTTTGTGTTAC+AGG - chr8_1:66651061-66651080 Msa1208520:intron 20.0%
!!! TTAAAATGTTTTGTGTTACA+GGG - chr8_1:66651062-66651081 Msa1208520:intron 20.0%
!! AAACATTTGTTTCAATTGTT+GGG + chr8_1:66651612-66651631 None:intergenic 20.0%
!! TAAACATTTGTTTCAATTGT+TGG + chr8_1:66651613-66651632 None:intergenic 20.0%
!!! ATCTTTAAAAGATAATTGAC+AGG - chr8_1:66651852-66651871 Msa1208520:CDS 20.0%
!!! TCTTTAAAAGATAATTGACA+GGG - chr8_1:66651853-66651872 Msa1208520:CDS 20.0%
!!! AGTTTTTTTTTGAAGTAGAT+TGG - chr8_1:66651966-66651985 Msa1208520:CDS 20.0%
!!! TTTTATTTGTCTTTAAATCC+AGG - chr8_1:66652009-66652028 Msa1208520:CDS 20.0%
!! TTTAGGAAAAAAAAAACTAG+AGG + chr8_1:66652282-66652301 None:intergenic 20.0%
!! ATCTCTTATGTATTTATTAC+AGG - chr8_1:66652390-66652409 Msa1208520:CDS 20.0%
!! CTGAAATTGATGATAAAGTT+TGG - chr8_1:66648875-66648894 Msa1208520:three_prime_UTR 25.0%
!!! AAAGTTTTGAACTTTGATGA+TGG - chr8_1:66648952-66648971 Msa1208520:CDS 25.0%
!!! TGAAAATGAAGAATTTGTTG+AGG - chr8_1:66649041-66649060 Msa1208520:CDS 25.0%
!!! GAAAATGAAGAATTTGTTGA+GGG - chr8_1:66649042-66649061 Msa1208520:CDS 25.0%
!! TGTTCATTTTATATGAAGAC+TGG - chr8_1:66649318-66649337 Msa1208520:intron 25.0%
!! GTTCATTTTATATGAAGACT+GGG - chr8_1:66649319-66649338 Msa1208520:intron 25.0%
!! GAAAATAAATAACCTGGTTT+TGG + chr8_1:66649398-66649417 None:intergenic 25.0%
! GAAAGAGAAAATAAATAACC+TGG + chr8_1:66649404-66649423 None:intergenic 25.0%
! TATGGCATTGTTGAAATTTA+AGG - chr8_1:66649497-66649516 Msa1208520:CDS 25.0%
!!! CTGAATGTAGTATTTTTGAT+TGG - chr8_1:66649585-66649604 Msa1208520:CDS 25.0%
! CCCGTAATAATTTGAAAAAA+TGG - chr8_1:66649751-66649770 Msa1208520:intron 25.0%
! ACTAGGAATATAACTAAAGT+CGG + chr8_1:66649966-66649985 None:intergenic 25.0%
! GGAAATGAAAAAAACATGTT+AGG + chr8_1:66650420-66650439 None:intergenic 25.0%
! TTATCAATATTATCCTTGCT+AGG + chr8_1:66650778-66650797 None:intergenic 25.0%
! AGCAAGGATAATATTGATAA+TGG - chr8_1:66650778-66650797 Msa1208520:intron 25.0%
!!! AGAAAGTTAAGTTCTGAAAT+TGG + chr8_1:66650948-66650967 None:intergenic 25.0%
! ATTTCAGAACTTAACTTTCT+CGG - chr8_1:66650948-66650967 Msa1208520:CDS 25.0%
! TAAGATCGCATAATAGAAAA+TGG + chr8_1:66651442-66651461 None:intergenic 25.0%
! AATAAACTCTAGTAACTACT+AGG + chr8_1:66651887-66651906 None:intergenic 25.0%
! GTTATGGAATTTGCAAATTT+GGG - chr8_1:66652059-66652078 Msa1208520:CDS 25.0%
! AAAAAAAAACTAGAGGTTCT+GGG + chr8_1:66652275-66652294 None:intergenic 25.0%
! AAAAAAAAAACTAGAGGTTC+TGG + chr8_1:66652276-66652295 None:intergenic 25.0%
!!! GATTGATTATCTGTTATTTC+TGG - chr8_1:66652430-66652449 Msa1208520:CDS 25.0%
! TTTAAACTTCAAAACTCCAT+TGG + chr8_1:66652520-66652539 None:intergenic 25.0%
!!! AGTTTTGAAGTTTAAAAGTC+AGG - chr8_1:66652524-66652543 Msa1208520:CDS 25.0%
!!! GTTTTGAAGTTTAAAAGTCA+GGG - chr8_1:66652525-66652544 Msa1208520:CDS 25.0%
AAAGTTTCGAACTTTAACGA+TGG - chr8_1:66648826-66648845 Msa1208520:three_prime_UTR 30.0%
! AAAGTTTGGAACTTTAACGA+TGG - chr8_1:66648889-66648908 Msa1208520:three_prime_UTR 30.0%
AGATGAAGAAGAATCTGTTA+AGG - chr8_1:66649017-66649036 Msa1208520:CDS 30.0%
GATGAAGAAGAATCTGTTAA+GGG - chr8_1:66649018-66649037 Msa1208520:CDS 30.0%
!!! TTTTGGTTTTTCCTCCTAAT+GGG + chr8_1:66649381-66649400 None:intergenic 30.0%
TCAACAATGCCATATCTAAA+GGG + chr8_1:66649491-66649510 None:intergenic 30.0%
TTCAACAATGCCATATCTAA+AGG + chr8_1:66649492-66649511 None:intergenic 30.0%
!! ACAAAAACAAAGGGTATTTG+GGG + chr8_1:66649546-66649565 None:intergenic 30.0%
!! CACAAAAACAAAGGGTATTT+GGG + chr8_1:66649547-66649566 None:intergenic 30.0%
!! GTATTTTTGATTGGAAGAAC+TGG - chr8_1:66649594-66649613 Msa1208520:intron 30.0%
AATAACTGTTGCATCTTTGT+TGG - chr8_1:66649618-66649637 Msa1208520:intron 30.0%
!!! TGCCTTTAAAATGTCTGTTT+TGG - chr8_1:66649897-66649916 Msa1208520:CDS 30.0%
ATGTTAGTGTCAAAAAACAG+AGG + chr8_1:66649923-66649942 None:intergenic 30.0%
ATATAGTAGAAGATCTCACT+AGG + chr8_1:66649983-66650002 None:intergenic 30.0%
TAGTGAGATCTTCTACTATA+TGG - chr8_1:66649982-66650001 Msa1208520:CDS 30.0%
! GGAAGAGAAAGTTTTACTTT+AGG - chr8_1:66650034-66650053 Msa1208520:CDS 30.0%
! AGAGAAAGTTTTACTTTAGG+AGG - chr8_1:66650037-66650056 Msa1208520:CDS 30.0%
!! GAGAAAGTTTTACTTTAGGA+GGG - chr8_1:66650038-66650057 Msa1208520:CDS 30.0%
ACATAGCAAACATGTTCTAT+TGG - chr8_1:66650088-66650107 Msa1208520:intron 30.0%
!!! TTCTATTGGCTTTTATGACT+GGG - chr8_1:66650102-66650121 Msa1208520:intron 30.0%
ATAAACGATCTATGACCTTA+AGG + chr8_1:66650451-66650470 None:intergenic 30.0%
GATCGTTTATGTTCAATCTT+AGG - chr8_1:66650461-66650480 Msa1208520:intron 30.0%
! ACTTTTACTTGTAGTACCAA+GGG - chr8_1:66650513-66650532 Msa1208520:intron 30.0%
CAGCCAGTAATTATTAATCA+AGG + chr8_1:66650590-66650609 None:intergenic 30.0%
! TTAATAATTACTGGCTGCTT+AGG - chr8_1:66650593-66650612 Msa1208520:intron 30.0%
! GGATTAATAGATGTCACTTA+TGG - chr8_1:66650614-66650633 Msa1208520:intron 30.0%
!!! TGGTTGTTTGGTTTTTACAA+TGG - chr8_1:66650708-66650727 Msa1208520:intron 30.0%
TTTATTATGCTTTCCTAGCA+AGG - chr8_1:66650762-66650781 Msa1208520:intron 30.0%
AAAAAATAATCCTTGCCAGA+TGG + chr8_1:66651386-66651405 None:intergenic 30.0%
AATATGTAACTCATGGAACA+GGG + chr8_1:66651470-66651489 None:intergenic 30.0%
TTGGTAGAATATGTAACTCA+TGG + chr8_1:66651477-66651496 None:intergenic 30.0%
AAAACTTGTAAGAGTTCAGT+TGG + chr8_1:66651496-66651515 None:intergenic 30.0%
ACAGACAAGTCAAATTGATT+AGG + chr8_1:66651519-66651538 None:intergenic 30.0%
!! TAATCAATTTGACTTGTCTG+TGG - chr8_1:66651518-66651537 Msa1208520:intron 30.0%
TTCATGACATAAGTAGAAGA+TGG + chr8_1:66651586-66651605 None:intergenic 30.0%
TTAATGAAGAAACTGCATTC+AGG + chr8_1:66651691-66651710 None:intergenic 30.0%
TGCAGTTTCTTCATTAAAAC+TGG - chr8_1:66651694-66651713 Msa1208520:intron 30.0%
GCAGTTTCTTCATTAAAACT+GGG - chr8_1:66651695-66651714 Msa1208520:intron 30.0%
CAGTTTCTTCATTAAAACTG+GGG - chr8_1:66651696-66651715 Msa1208520:intron 30.0%
AATTTCACCATCCAAAGAAT+CGG - chr8_1:66651743-66651762 Msa1208520:intron 30.0%
! TTAGTATGATTAGTCGTATG+AGG - chr8_1:66651925-66651944 Msa1208520:CDS 30.0%
CGTTATGGAATTTGCAAATT+TGG - chr8_1:66652058-66652077 Msa1208520:CDS 30.0%
! TCAAGGATCTTCTATCTTTT+TGG - chr8_1:66652238-66652257 Msa1208520:CDS 30.0%
TCCTTTGGATTAAAGTTAAC+TGG - chr8_1:66652454-66652473 Msa1208520:CDS 30.0%
ACCAGTTAACTTTAATCCAA+AGG + chr8_1:66652458-66652477 None:intergenic 30.0%
TGGATTAAAGTTAACTGGTT+TGG - chr8_1:66652459-66652478 Msa1208520:CDS 30.0%
!! TTAAAGTTAACTGGTTTGGA+TGG - chr8_1:66652463-66652482 Msa1208520:CDS 30.0%
TTATATGGGGAATCAGCAAA+GGG + chr8_1:66648462-66648481 None:intergenic 35.0%
TTTATATGGGGAATCAGCAA+AGG + chr8_1:66648463-66648482 None:intergenic 35.0%
! TGCTATTAGGGTTTGAAATG+TGG - chr8_1:66648577-66648596 Msa1208520:three_prime_UTR 35.0%
! TATTAGGGTTTGAAATGTGG+AGG - chr8_1:66648580-66648599 Msa1208520:three_prime_UTR 35.0%
! ATTAGGGTTTGAAATGTGGA+GGG - chr8_1:66648581-66648600 Msa1208520:three_prime_UTR 35.0%
TCATGAGAAGTTGGATTTGA+AGG - chr8_1:66648771-66648790 Msa1208520:three_prime_UTR 35.0%
GATTTGAAGGTTGAAGATGA+AGG - chr8_1:66648784-66648803 Msa1208520:three_prime_UTR 35.0%
TGAAGTAGTTTCCGATGAAA+GGG - chr8_1:66648849-66648868 Msa1208520:three_prime_UTR 35.0%
!! AATTTGTTGAGGGTGAAGAA+AGG - chr8_1:66649052-66649071 Msa1208520:CDS 35.0%
! ATTTGTTGAGGGTGAAGAAA+GGG - chr8_1:66649053-66649072 Msa1208520:CDS 35.0%
AAGGTTGGGATACTAATAGT+TGG - chr8_1:66649097-66649116 Msa1208520:CDS 35.0%
AATGAACAATCTTCAGCTTC+AGG + chr8_1:66649306-66649325 None:intergenic 35.0%
GCAAATTTAATCACCCCATT+AGG - chr8_1:66649364-66649383 Msa1208520:CDS 35.0%
AATTTAATCACCCCATTAGG+AGG - chr8_1:66649367-66649386 Msa1208520:CDS 35.0%
!!! TTTGGTTTTTCCTCCTAATG+GGG + chr8_1:66649380-66649399 None:intergenic 35.0%
!!! GTTTTGGTTTTTCCTCCTAA+TGG + chr8_1:66649382-66649401 None:intergenic 35.0%
CTGATGAATCCCTTTAGATA+TGG - chr8_1:66649479-66649498 Msa1208520:CDS 35.0%
!! CCACAAAAACAAAGGGTATT+TGG + chr8_1:66649548-66649567 None:intergenic 35.0%
!!! CCAAATACCCTTTGTTTTTG+TGG - chr8_1:66649545-66649564 Msa1208520:CDS 35.0%
!!! AATACCCTTTGTTTTTGTGG+TGG - chr8_1:66649548-66649567 Msa1208520:CDS 35.0%
ATGTCCACCACAAAAACAAA+GGG + chr8_1:66649555-66649574 None:intergenic 35.0%
AATGTCCACCACAAAAACAA+AGG + chr8_1:66649556-66649575 None:intergenic 35.0%
TATGTGCTTCAAAGATTGCA+AGG + chr8_1:66649689-66649708 None:intergenic 35.0%
!! CAATCTTTGAAGCACATACA+CGG - chr8_1:66649691-66649710 Msa1208520:intron 35.0%
! TGATAGTGTTAGTGTCATGT+CGG - chr8_1:66649796-66649815 Msa1208520:intron 35.0%
! ACGACTTCTATTAGAAGTGT+CGG - chr8_1:66649850-66649869 Msa1208520:CDS 35.0%
! GGCCAAAACAGACATTTTAA+AGG + chr8_1:66649902-66649921 None:intergenic 35.0%
ATCTTCTACTATATGGCGTA+AGG - chr8_1:66649989-66650008 Msa1208520:CDS 35.0%
CTTCGCTAGGGTTATAAAAA+TGG - chr8_1:66650013-66650032 Msa1208520:CDS 35.0%
!!! GTTCTATTGGCTTTTATGAC+TGG - chr8_1:66650101-66650120 Msa1208520:intron 35.0%
TTACTATCACACTATCACTC+TGG - chr8_1:66650312-66650331 Msa1208520:intron 35.0%
! CACTTTTACTTGTAGTACCA+AGG - chr8_1:66650512-66650531 Msa1208520:intron 35.0%
! CTTTTACTTGTAGTACCAAG+GGG - chr8_1:66650514-66650533 Msa1208520:intron 35.0%
TGGTATGGCAGTATTATCAA+AGG - chr8_1:66650862-66650881 Msa1208520:intron 35.0%
ATAAGTTGTACCAGACGAAT+AGG + chr8_1:66650978-66650997 None:intergenic 35.0%
TCCATTCCAATCAGAAGTTT+GGG + chr8_1:66651330-66651349 None:intergenic 35.0%
ATCCATTCCAATCAGAAGTT+TGG + chr8_1:66651331-66651350 None:intergenic 35.0%
TTCTGATTGGAATGGATATC+AGG - chr8_1:66651334-66651353 Msa1208520:intron 35.0%
ATTCAATACCAAAAGCCATC+TGG - chr8_1:66651368-66651387 Msa1208520:intron 35.0%
ATATGTAACTCATGGAACAG+GGG + chr8_1:66651469-66651488 None:intergenic 35.0%
GAATATGTAACTCATGGAAC+AGG + chr8_1:66651471-66651490 None:intergenic 35.0%
! CTTTCTGGAAACACTTCAAA+CGG + chr8_1:66651658-66651677 None:intergenic 35.0%
ATTTCACCATCCAAAGAATC+GGG - chr8_1:66651744-66651763 Msa1208520:intron 35.0%
AAAACAGCAGCATAACTTAC+AGG + chr8_1:66651820-66651839 None:intergenic 35.0%
TATGAGGCTACTAAGTAGAT+TGG - chr8_1:66651941-66651960 Msa1208520:CDS 35.0%
AGATAGAAGATCCTTGACAA+AGG + chr8_1:66652235-66652254 None:intergenic 35.0%
!! TCTGTTATTTCTGGTTCCTT+TGG - chr8_1:66652439-66652458 Msa1208520:CDS 35.0%
AAAATCATTGCACTATGCAC+CGG + chr8_1:66652586-66652605 None:intergenic 35.0%
AGTTAAATGCTTCTGCCATT+TGG - chr8_1:66652651-66652670 Msa1208520:five_prime_UTR 35.0%
! GTTAAATGCTTCTGCCATTT+GGG - chr8_1:66652652-66652671 Msa1208520:five_prime_UTR 35.0%
GCATATGAATATGACCCAAA+TGG + chr8_1:66652669-66652688 None:intergenic 35.0%
!! ACTTTCTCATTTTTCCTGCT+GGG + chr8_1:66652698-66652717 None:intergenic 35.0%
! TTTGAAATGTGGAGGGAGAA+TGG - chr8_1:66648588-66648607 Msa1208520:three_prime_UTR 40.0%
ACCGTCAGATCTCAATCAAA+CGG - chr8_1:66648714-66648733 Msa1208520:three_prime_UTR 40.0%
ACCGTTTGATTGAGATCTGA+CGG + chr8_1:66648718-66648737 None:intergenic 40.0%
!! GAATGATGATGAACTTGCTG+TGG - chr8_1:66648744-66648763 Msa1208520:three_prime_UTR 40.0%
GTGAAGTAGTTTCCGATGAA+AGG - chr8_1:66648848-66648867 Msa1208520:three_prime_UTR 40.0%
GAAGTAGTTTCCGATGAAAG+GGG - chr8_1:66648850-66648869 Msa1208520:three_prime_UTR 40.0%
AATTTCAGCACCCCTTTCAT+CGG + chr8_1:66648863-66648882 None:intergenic 40.0%
TTTAACGATGGTGAACGAGT+TGG - chr8_1:66648901-66648920 Msa1208520:three_prime_UTR 40.0%
! TGAACGAGTTGGAGATGAAA+GGG - chr8_1:66648912-66648931 Msa1208520:three_prime_UTR 40.0%
! TGGTGATGAAGAATCTCTGA+AGG - chr8_1:66648984-66649003 Msa1208520:CDS 40.0%
GGTGATGAAGAATCTCTGAA+GGG - chr8_1:66648985-66649004 Msa1208520:CDS 40.0%
! AGAATCTCTGAAGGGTGAAA+AGG - chr8_1:66648993-66649012 Msa1208520:CDS 40.0%
!! GAAGAAAGGGTTGATGTTGA+TGG - chr8_1:66649066-66649085 Msa1208520:CDS 40.0%
GAGAATGTGAATGAAGAGCT+TGG - chr8_1:66649123-66649142 Msa1208520:intron 40.0%
AATGTGAATGAAGAGCTTGG+TGG - chr8_1:66649126-66649145 Msa1208520:intron 40.0%
TGGTAGAGATGCTGATGATT+GGG - chr8_1:66649149-66649168 Msa1208520:intron 40.0%
! CTGGTTATGGTGCTGAATAT+GGG - chr8_1:66649199-66649218 Msa1208520:intron 40.0%
! TGGTTATGGTGCTGAATATG+GGG - chr8_1:66649200-66649219 Msa1208520:intron 40.0%
! TTATGGCTATGGTGATGAGA+AGG - chr8_1:66649239-66649258 Msa1208520:intron 40.0%
GAACTCATCAATTCCCTTTG+AGG - chr8_1:66649280-66649299 Msa1208520:intron 40.0%
TAGGAGGAAAAACCAAAACC+AGG - chr8_1:66649383-66649402 Msa1208520:CDS 40.0%
GTGTCAGACACTAACATTGT+CGG - chr8_1:66649818-66649837 Msa1208520:CDS 40.0%
! TTTACTTTAGGAGGGACAGT+AGG - chr8_1:66650046-66650065 Msa1208520:CDS 40.0%
!!! GGTGTTTTGACTACAAATGC+AGG - chr8_1:66650173-66650192 Msa1208520:intron 40.0%
ACTACAAATGCAGGCTGTTA+GGG - chr8_1:66650182-66650201 Msa1208520:CDS 40.0%
CAATAACCTTGCATTCTGTC+TGG + chr8_1:66650248-66650267 None:intergenic 40.0%
ATAAACCTTGCACACAGTCA+CGG + chr8_1:66650383-66650402 None:intergenic 40.0%
CATTTCCTTGTGTCACCTTA+AGG - chr8_1:66650433-66650452 Msa1208520:intron 40.0%
TATGACCTTAAGGTGACACA+AGG + chr8_1:66650441-66650460 None:intergenic 40.0%
! GTAAAAGTGCAGAACAACGT+CGG + chr8_1:66650501-66650520 None:intergenic 40.0%
TATGTCCTACTCTTTAACCC+AGG + chr8_1:66650541-66650560 None:intergenic 40.0%
TTATGGACACTCTGATTCTC+AGG - chr8_1:66650631-66650650 Msa1208520:intron 40.0%
AGGAAGCAAACATGGTTGTT+TGG - chr8_1:66650696-66650715 Msa1208520:intron 40.0%
TGGCAGTATTATCAAAGGTC+TGG - chr8_1:66650867-66650886 Msa1208520:intron 40.0%
CAGTATTATCAAAGGTCTGG+AGG - chr8_1:66650870-66650889 Msa1208520:intron 40.0%
TGTAAGTACAACCACTCAAG+AGG - chr8_1:66650912-66650931 Msa1208520:CDS 40.0%
GTAAGTACAACCACTCAAGA+GGG - chr8_1:66650913-66650932 Msa1208520:CDS 40.0%
GTAAGTTTGGATCGAACTGT+AGG - chr8_1:66651123-66651142 Msa1208520:intron 40.0%
!! AATCAGGGTATGGTAATGGA+GGG - chr8_1:66651189-66651208 Msa1208520:intron 40.0%
TGATACACCTCGTAGTGAAA+CGG + chr8_1:66651216-66651235 None:intergenic 40.0%
CTTTCTTGAAGAAGACCATG+AGG + chr8_1:66651252-66651271 None:intergenic 40.0%
CCATTCCAATCAGAAGTTTG+GGG + chr8_1:66651329-66651348 None:intergenic 40.0%
! GACTTGTCTGTGGTTTGTAA+AGG - chr8_1:66651528-66651547 Msa1208520:intron 40.0%
CATGATCCTCTCTGATAAGT+AGG + chr8_1:66651560-66651579 None:intergenic 40.0%
! CGTTTGAAGTGTTTCCAGAA+AGG - chr8_1:66651656-66651675 Msa1208520:intron 40.0%
AACTTTGCAACCCGATTCTT+TGG + chr8_1:66651757-66651776 None:intergenic 40.0%
GCATAACTTACAGGTCTCAA+AGG + chr8_1:66651811-66651830 None:intergenic 40.0%
!!! TGCTGCTGTTTTTGCTTCTA+TGG - chr8_1:66651828-66651847 Msa1208520:CDS 40.0%
AGCATTAGCTGAGTTTGCAT+AGG + chr8_1:66652152-66652171 None:intergenic 40.0%
CTGTCTAAAAGCCTTTGTCA+AGG - chr8_1:66652221-66652240 Msa1208520:CDS 40.0%
TCTTGTTCAACAGTTGCCAA+TGG - chr8_1:66652501-66652520 Msa1208520:CDS 40.0%
!! CTTTCTCATTTTTCCTGCTG+GGG + chr8_1:66652697-66652716 None:intergenic 40.0%
!! CACTTTCTCATTTTTCCTGC+TGG + chr8_1:66652699-66652718 None:intergenic 40.0%
AAAGGGAGTGAAGAAACCAG+GGG + chr8_1:66648445-66648464 None:intergenic 45.0%
CAAAGGGAGTGAAGAAACCA+GGG + chr8_1:66648446-66648465 None:intergenic 45.0%
AGAAAGATCACACACTGACG+CGG + chr8_1:66648522-66648541 None:intergenic 45.0%
TTGAACCTCAGAACCCAGTT+GGG + chr8_1:66648665-66648684 None:intergenic 45.0%
GGTGGAGAATGATGATCAAC+TGG + chr8_1:66648697-66648716 None:intergenic 45.0%
GTTTGATTGAGATCTGACGG+TGG + chr8_1:66648715-66648734 None:intergenic 45.0%
TGTGGAGCTTCATGAGAAGT+TGG - chr8_1:66648762-66648781 Msa1208520:three_prime_UTR 45.0%
! GTGAACGAGTTGGAGATGAA+AGG - chr8_1:66648911-66648930 Msa1208520:three_prime_UTR 45.0%
! GAACGAGTTGGAGATGAAAG+GGG - chr8_1:66648913-66648932 Msa1208520:three_prime_UTR 45.0%
!! TTTGATGATGGCGAACGAGT+TGG - chr8_1:66648964-66648983 Msa1208520:CDS 45.0%
! GATGTTGATGGAGACAGCAA+AGG - chr8_1:66649078-66649097 Msa1208520:CDS 45.0%
TTGATGGAGACAGCAAAGGT+TGG - chr8_1:66649082-66649101 Msa1208520:CDS 45.0%
TGATGGAGACAGCAAAGGTT+GGG - chr8_1:66649083-66649102 Msa1208520:CDS 45.0%
GTGGTAGAGATGCTGATGAT+TGG - chr8_1:66649148-66649167 Msa1208520:intron 45.0%
GGTAGAGATGCTGATGATTG+GGG - chr8_1:66649150-66649169 Msa1208520:intron 45.0%
GATGCTGATGATTGGGGTTA+TGG - chr8_1:66649156-66649175 Msa1208520:intron 45.0%
! GCTGGTTATGGTGCTGAATA+TGG - chr8_1:66649198-66649217 Msa1208520:intron 45.0%
! TATGGTGCTGAATATGGGGA+TGG - chr8_1:66649204-66649223 Msa1208520:intron 45.0%
GCTGAATATGGGGATGGTTA+TGG - chr8_1:66649210-66649229 Msa1208520:intron 45.0%
TATGGGGATGGTTATGGTGA+CGG - chr8_1:66649216-66649235 Msa1208520:intron 45.0%
!! GATGGTTATGGTGACGGTTA+TGG - chr8_1:66649222-66649241 Msa1208520:intron 45.0%
!! TATGGTGACGGTTATGGCTA+TGG - chr8_1:66649228-66649247 Msa1208520:intron 45.0%
AAGGAAGAGAAAAGCAGCGA+TGG - chr8_1:66649258-66649277 Msa1208520:intron 45.0%
AAGACTGGGAGTTGCAAGTT+TGG - chr8_1:66649333-66649352 Msa1208520:intron 45.0%
!! CAAAGGGTATTTGGGGCAAA+AGG + chr8_1:66649539-66649558 None:intergenic 45.0%
GACTACAAATGCAGGCTGTT+AGG - chr8_1:66650181-66650200 Msa1208520:CDS 45.0%
AGAAGAACCAGAAGAGAACG+CGG - chr8_1:66650221-66650240 Msa1208520:CDS 45.0%
TAAACCTTGCACACAGTCAC+GGG + chr8_1:66650382-66650401 None:intergenic 45.0%
ATGTTTGCTTCCTCTGTTCG+TGG + chr8_1:66650689-66650708 None:intergenic 45.0%
ACGAACAGAGGAAGCAAACA+TGG - chr8_1:66650688-66650707 Msa1208520:intron 45.0%
AGGTCTGGAGGTTGTAAGTT+TGG - chr8_1:66650882-66650901 Msa1208520:intron 45.0%
CATCCTGATCCTACAACTGT+CGG - chr8_1:66651152-66651171 Msa1208520:intron 45.0%
GAGGATCTGATCCTCAATCA+GGG - chr8_1:66651174-66651193 Msa1208520:intron 45.0%
TCTGATCCTCAATCAGGGTA+TGG - chr8_1:66651179-66651198 Msa1208520:intron 45.0%
CCATTACCATACCCTGATTG+AGG + chr8_1:66651188-66651207 None:intergenic 45.0%
CCTCAATCAGGGTATGGTAA+TGG - chr8_1:66651185-66651204 Msa1208520:intron 45.0%
!! CAATCAGGGTATGGTAATGG+AGG - chr8_1:66651188-66651207 Msa1208520:intron 45.0%
GTAGGCATCAATGGAGCAAA+AGG + chr8_1:66651287-66651306 None:intergenic 45.0%
TTGCTCCCCAAACTTCTGAT+TGG - chr8_1:66651321-66651340 Msa1208520:intron 45.0%
CCCCAAACTTCTGATTGGAA+TGG - chr8_1:66651326-66651345 Msa1208520:intron 45.0%
ATACCAAAAGCCATCTGGCA+AGG - chr8_1:66651373-66651392 Msa1208520:intron 45.0%
! AATCCTTGCCAGATGGCTTT+TGG + chr8_1:66651379-66651398 None:intergenic 45.0%
ATCCTCTCTGATAAGTAGGC+AGG + chr8_1:66651556-66651575 None:intergenic 45.0%
!! CAAACGGCATCTGCTTTTGA+TGG + chr8_1:66651642-66651661 None:intergenic 45.0%
! AAACTGCATTCAGGTTCACC+AGG + chr8_1:66651682-66651701 None:intergenic 45.0%
TTGCAACCCGATTCTTTGGA+TGG + chr8_1:66651753-66651772 None:intergenic 45.0%
TTGTCACTAAGGTTGCAAGG+AGG + chr8_1:66651781-66651800 None:intergenic 45.0%
TCCTTGCAACCTTAGTGACA+AGG - chr8_1:66651780-66651799 Msa1208520:CDS 45.0%
CCTTGCAACCTTAGTGACAA+GGG - chr8_1:66651781-66651800 Msa1208520:CDS 45.0%
AACTTACAGGTCTCAAAGGC+AGG + chr8_1:66651807-66651826 None:intergenic 45.0%
TGCTCGCACTATAGTCGTTA+TGG - chr8_1:66652043-66652062 Msa1208520:CDS 45.0%
TGCAAACTCAGCTAATGCTC+AGG - chr8_1:66652153-66652172 Msa1208520:CDS 45.0%
AAACTCAGCTAATGCTCAGG+TGG - chr8_1:66652156-66652175 Msa1208520:CDS 45.0%
ACTGCAGGGAAAGAGTGAAT+GGG + chr8_1:66652634-66652653 None:intergenic 45.0%
AACTGCAGGGAAAGAGTGAA+TGG + chr8_1:66652635-66652654 None:intergenic 45.0%
!! GGCAGAAGCATTTAACTGCA+GGG + chr8_1:66652648-66652667 None:intergenic 45.0%
!! TGGCAGAAGCATTTAACTGC+AGG + chr8_1:66652649-66652668 None:intergenic 45.0%
GCAAAGGGAGTGAAGAAACC+AGG + chr8_1:66648447-66648466 None:intergenic 50.0%
AGAACCCAGTTGGGGTTCTT+CGG + chr8_1:66648656-66648675 None:intergenic 50.0%
TGAACCTCAGAACCCAGTTG+GGG + chr8_1:66648664-66648683 None:intergenic 50.0%
GTTGAACCTCAGAACCCAGT+TGG + chr8_1:66648666-66648685 None:intergenic 50.0%
! GTGAATGAAGAGCTTGGTGG+TGG - chr8_1:66649129-66649148 Msa1208520:intron 50.0%
GCTGATGATTGGGGTTATGG+TGG - chr8_1:66649159-66649178 Msa1208520:intron 50.0%
GATGATTGGGGTTATGGTGG+TGG - chr8_1:66649162-66649181 Msa1208520:intron 50.0%
CTTCAGCTTCAGGCCTCAAA+GGG + chr8_1:66649296-66649315 None:intergenic 50.0%
TCTTCAGCTTCAGGCCTCAA+AGG + chr8_1:66649297-66649316 None:intergenic 50.0%
GGCATTGCGATTTGCAAGCT+TGG + chr8_1:66649881-66649900 None:intergenic 50.0%
TATGGCGTAAGGACTTCGCT+AGG - chr8_1:66650000-66650019 Msa1208520:CDS 50.0%
ATGGCGTAAGGACTTCGCTA+GGG - chr8_1:66650001-66650020 Msa1208520:CDS 50.0%
AATGCAGGCTGTTAGGGAGA+AGG - chr8_1:66650188-66650207 Msa1208520:CDS 50.0%
GAAGAACCAGAAGAGAACGC+GGG - chr8_1:66650222-66650241 Msa1208520:CDS 50.0%
AAACCTTGCACACAGTCACG+GGG + chr8_1:66650381-66650400 None:intergenic 50.0%
TTGTAGTACCAAGGGGACCT+GGG - chr8_1:66650521-66650540 Msa1208520:intron 50.0%
TGTACATGAGCCACGAACAG+AGG - chr8_1:66650676-66650695 Msa1208520:intron 50.0%
TCTCGGCTTACCTATTCGTC+TGG - chr8_1:66650965-66650984 Msa1208520:intron 50.0%
AGCCAGTGCGCATGTAATAG+GGG + chr8_1:66651100-66651119 None:intergenic 50.0%
GAGCCAGTGCGCATGTAATA+GGG + chr8_1:66651101-66651120 None:intergenic 50.0%
AGAGCCAGTGCGCATGTAAT+AGG + chr8_1:66651102-66651121 None:intergenic 50.0%
!! CGCACTGGCTCTTGTAAGTT+TGG - chr8_1:66651110-66651129 Msa1208520:intron 50.0%
TCAGATCCTCCGACAGTTGT+AGG + chr8_1:66651164-66651183 None:intergenic 50.0%
GGAGGATCTGATCCTCAATC+AGG - chr8_1:66651173-66651192 Msa1208520:intron 50.0%
TGAGTAGGCGTAGGCATCAA+TGG + chr8_1:66651296-66651315 None:intergenic 50.0%
TTGATGCCTACGCCTACTCA+AGG - chr8_1:66651296-66651315 Msa1208520:intron 50.0%
CACCTGCCTACTTATCAGAG+AGG - chr8_1:66651551-66651570 Msa1208520:intron 50.0%
! GAAGTGTTTCCAGAAAGGCC+TGG - chr8_1:66651661-66651680 Msa1208520:intron 50.0%
CCCTTGTCACTAAGGTTGCA+AGG + chr8_1:66651784-66651803 None:intergenic 50.0%
TATAGTGCGAGCAGACACTC+TGG + chr8_1:66652036-66652055 None:intergenic 50.0%
GGGTGGTCAAATCTACAAGC+TGG + chr8_1:66652085-66652104 None:intergenic 50.0%
! TTAGGGGAAGTGCGCTTTCT+GGG + chr8_1:66652105-66652124 None:intergenic 50.0%
! ATTAGGGGAAGTGCGCTTTC+TGG + chr8_1:66652106-66652125 None:intergenic 50.0%
TCCGAGTCCAGGCATCATTA+GGG + chr8_1:66652122-66652141 None:intergenic 50.0%
TAGGATTGTTGTCCGAGTCC+AGG + chr8_1:66652133-66652152 None:intergenic 50.0%
!! GGTGGTAGTACTGGTTAGCA+CGG + chr8_1:66652558-66652577 None:intergenic 50.0%
CCAGTACTACCACCAATAGC+CGG - chr8_1:66652564-66652583 Msa1208520:five_prime_UTR 50.0%
!! TTGCACTATGCACCGGCTAT+TGG + chr8_1:66652579-66652598 None:intergenic 50.0%
CTGCAGGGAAAGAGTGAATG+GGG + chr8_1:66652633-66652652 None:intergenic 50.0%
TCATATGCATATGCCCCAGC+AGG - chr8_1:66652681-66652700 Msa1208520:five_prime_UTR 50.0%
AACGCCGAAGAACCCCAACT+GGG - chr8_1:66648649-66648668 Msa1208520:three_prime_UTR 55.0%
AGAACCCCAACTGGGTTCTG+AGG - chr8_1:66648657-66648676 Msa1208520:three_prime_UTR 55.0%
!! TGGGGTTATGGTGGTGGTGA+TGG - chr8_1:66649168-66649187 Msa1208520:intron 55.0%
!! GGTTATGGTGGTGGTGATGG+TGG - chr8_1:66649171-66649190 Msa1208520:intron 55.0%
!! TATGGTGGTGGTGATGGTGG+TGG - chr8_1:66649174-66649193 Msa1208520:intron 55.0%
!! GATGGTGGTGGTGCTGGTTA+TGG - chr8_1:66649186-66649205 Msa1208520:intron 55.0%
CTTGTAGTACCAAGGGGACC+TGG - chr8_1:66650520-66650539 Msa1208520:intron 55.0%
CTCTTTAACCCAGGTCCCCT+TGG + chr8_1:66650532-66650551 None:intergenic 55.0%
GGGGACCTGGGTTAAAGAGT+AGG - chr8_1:66650533-66650552 Msa1208520:intron 55.0%
GTGCTGTGAACCCTCTTGAG+TGG + chr8_1:66650926-66650945 None:intergenic 55.0%
TGCCCCTATTACATGCGCAC+TGG - chr8_1:66651095-66651114 Msa1208520:intron 55.0%
CCTCCGACAGTTGTAGGATC+AGG + chr8_1:66651158-66651177 None:intergenic 55.0%
CCTGATCCTACAACTGTCGG+AGG - chr8_1:66651155-66651174 Msa1208520:intron 55.0%
CACAACAACCTGTCGCCTCA+TGG - chr8_1:66651234-66651253 Msa1208520:intron 55.0%
GAAGAAGACCATGAGGCGAC+AGG + chr8_1:66651245-66651264 None:intergenic 55.0%
GCAAGTCCTTGAGTAGGCGT+AGG + chr8_1:66651305-66651324 None:intergenic 55.0%
TGGGGAGCAAGTCCTTGAGT+AGG + chr8_1:66651311-66651330 None:intergenic 55.0%
TCAGGTTCACCAGGCCTTTC+TGG + chr8_1:66651673-66651692 None:intergenic 55.0%
AAGGCAGGCCCTTGTCACTA+AGG + chr8_1:66651792-66651811 None:intergenic 55.0%
GCACTTCCCCTAATGATGCC+TGG - chr8_1:66652112-66652131 Msa1208520:CDS 55.0%
CCGAGTCCAGGCATCATTAG+GGG + chr8_1:66652121-66652140 None:intergenic 55.0%
CCCCTAATGATGCCTGGACT+CGG - chr8_1:66652118-66652137 Msa1208520:CDS 55.0%
GTCCGAGTCCAGGCATCATT+AGG + chr8_1:66652123-66652142 None:intergenic 55.0%
TCAGCTAATGCTCAGGTGGC+TGG - chr8_1:66652160-66652179 Msa1208520:CDS 55.0%
CAGCTAATGCTCAGGTGGCT+GGG - chr8_1:66652161-66652180 Msa1208520:CDS 55.0%
TAATGCTCAGGTGGCTGGGA+TGG - chr8_1:66652165-66652184 Msa1208520:CDS 55.0%
AATGCTCAGGTGGCTGGGAT+GGG - chr8_1:66652166-66652185 Msa1208520:CDS 55.0%
! CCGGCTATTGGTGGTAGTAC+TGG + chr8_1:66652567-66652586 None:intergenic 55.0%
!! CACTATGCACCGGCTATTGG+TGG + chr8_1:66652576-66652595 None:intergenic 55.0%
CAGTTGGGGTTCTTCGGCGT+TGG + chr8_1:66648650-66648669 None:intergenic 60.0%
CAACGCCGAAGAACCCCAAC+TGG - chr8_1:66648648-66648667 Msa1208520:three_prime_UTR 60.0%
GTTCCCCGTGACTGTGTGCA+AGG - chr8_1:66650375-66650394 Msa1208520:intron 60.0%
GGAGGGTCCGTTTCACTACG+AGG - chr8_1:66651206-66651225 Msa1208520:intron 60.0%
!! GGTGGTGATGGTGGTGGTGC+TGG - chr8_1:66649180-66649199 Msa1208520:intron 65.0%
GTCTGGCCCGCGTTCTCTTC+TGG + chr8_1:66650231-66650250 None:intergenic 65.0%
CGCGGGCCAGACAGAATGCA+AGG - chr8_1:66650239-66650258 Msa1208520:CDS 65.0%
GCGAGCAGACACTCTGGTCC+TGG + chr8_1:66652030-66652049 None:intergenic 65.0%
! GGGGAAGTGCGCTTTCTGGG+TGG + chr8_1:66652102-66652121 None:intergenic 65.0%
GCTCAGGTGGCTGGGATGGG+TGG - chr8_1:66652169-66652188 Msa1208520:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 66648429 66652733 66648429 ID=Msa1208520;Name=Msa1208520
chr8_1 mRNA 66648429 66652733 66648429 ID=Msa1208520-mRNA-1;Parent=Msa1208520;Name=Msa1208520-mRNA-1;_AED=0.06;_eAED=0.06;_QI=178|1|1|1|1|1|6|505|572
chr8_1 exon 66648429 66649131 66648429 ID=Msa1208520-mRNA-1:exon:21945;Parent=Msa1208520-mRNA-1
chr8_1 exon 66649343 66649612 66649343 ID=Msa1208520-mRNA-1:exon:21944;Parent=Msa1208520-mRNA-1
chr8_1 exon 66649807 66650079 66649807 ID=Msa1208520-mRNA-1:exon:21943;Parent=Msa1208520-mRNA-1
chr8_1 exon 66650176 66650289 66650176 ID=Msa1208520-mRNA-1:exon:21942;Parent=Msa1208520-mRNA-1
chr8_1 exon 66650902 66650967 66650902 ID=Msa1208520-mRNA-1:exon:21941;Parent=Msa1208520-mRNA-1
chr8_1 exon 66651758 66652733 66651758 ID=Msa1208520-mRNA-1:exon:21940;Parent=Msa1208520-mRNA-1
chr8_1 five_prime_UTR 66652556 66652733 66652556 ID=Msa1208520-mRNA-1:five_prime_utr;Parent=Msa1208520-mRNA-1
chr8_1 CDS 66651758 66652555 66651758 ID=Msa1208520-mRNA-1:cds;Parent=Msa1208520-mRNA-1
chr8_1 CDS 66650902 66650967 66650902 ID=Msa1208520-mRNA-1:cds;Parent=Msa1208520-mRNA-1
chr8_1 CDS 66650176 66650289 66650176 ID=Msa1208520-mRNA-1:cds;Parent=Msa1208520-mRNA-1
chr8_1 CDS 66649807 66650079 66649807 ID=Msa1208520-mRNA-1:cds;Parent=Msa1208520-mRNA-1
chr8_1 CDS 66649343 66649612 66649343 ID=Msa1208520-mRNA-1:cds;Parent=Msa1208520-mRNA-1
chr8_1 CDS 66648934 66649131 66648934 ID=Msa1208520-mRNA-1:cds;Parent=Msa1208520-mRNA-1
chr8_1 three_prime_UTR 66648429 66648933 66648429 ID=Msa1208520-mRNA-1:three_prime_utr;Parent=Msa1208520-mRNA-1
Gene Sequence

>Msa1208520

ATGGAACACTCTGAAGAAATCGATTTAGCTGCTACTGTTTCCAACGCCGAAGAACCCCAACTGGGTTCTGAGGTTCAACAATCTTCACCAGTTGATCATCATTCTCCACCGTCAGATCTCAATCAAACGGTTCAAAAGAATGATGATGAACTTGCTGTGGAGCTTCATGAGAAGTTGGATTTGAAGGTTGAAGATGAAGGAGTTGTTGAAACTGATGATAAAGTTTCGAACTTTAACGATGGTGAAGTAGTTTCCGATGAAAGGGGTGCTGAAATTGATGATAAAGTTTGGAACTTTAACGATGGTGAACGAGTTGGAGATGAAAGGGGTGCTGAAACTGATGATAAAGTTTTGAACTTTGATGATGGCGAACGAGTTGGTGATGAAGAATCTCTGAAGGGTGAAAAGGAAGATGAAGAAGAATCTGTTAAGGGTGAAAATGAAGAATTTGTTGAGGGTGAAGAAAGGGTTGATGTTGATGGAGACAGCAAAGGTTGGGATACTAATAGTTGGAATGAGAATGTGAATGAAGAGCTTGGTGGTGGTAGAGATGCTGATGATTGGGGTTATGGTGGTGGTGATGGTGGTGGTGCTGGTTATGGTGCTGAATATGGGGATGGTTATGGTGACGGTTATGGCTATGGTGATGAGAAGGAAGAGAAAAGCAGCGATGGAACTCATCAATTCCCTTTGAGGCCTGAAGCTGAAGATTGTTCATTTTATATGAAGACTGGGAGTTGCAAGTTTGGATTCAACTGCAAATTTAATCACCCCATTAGGAGGAAAAACCAAAACCAGGCTGTTAGGGAGAAGGTGCGAGAAAGAGAAGAACCAGAAGAGAACGCGGGCCAGACAGAATGCAAGTATTATCAAAGGTCTGGAGGTTGTAAGTTTGGAAAAGCTTGTAAGTACAACCACTCAAGAGGGTTCACAGCACCAATTTCAGAACTTAACTTTCTCGGCTTACCTATTCGTCTGGGAGAGAGAGAGTGCCCCTATTACATGCGCACTGGCTCTTGTAAGTTTGGATCGAACTGTAGGTTTAATCATCCTGATCCTACAACTGTCGGAGGATCTGATCCTCAATCAGGGTATGGTAATGGAGGGTCCGTTTCACTACGAGGTGTATCACAACAACCTGTCGCCTCATGGTCTTCTTCAAGAAAGTTAAATGAAACACCTTTTGCTCCATTGATGCCTACGCCTACTCAAGGACTTGCTCCCCAAACTTCTGATTGGAATGGATATCAGGCACCTGCCTACTTATCAGAGAGGATCATGCATCCATCTTCTACTTATGTCATGAACAACCCAACAATTGAAACAAATGTTTACATGCACCATCAAAAGCAGATGCCGTTTGAAGTGTTTCCAGAAAGGCCTGGTGAACCTGAATGCAGTTTCTTCATTAAAACTGGGGATTGCAAGTTCAAATCTAATTGTAAATTTCACCATCCAAAGAATCGGGTTGCAAAGTTGCCTCCTTGCAACCTTAGTGACAAGGGCCTGCCTTTGAGACCTGACCAGAGTGTCTGCTCGCACTATAGTCGTTATGGAATTTGCAAATTTGGGCCAGCTTGTAGATTTGACCACCCAGAAAGCGCACTTCCCCTAATGATGCCTGGACTCGGACAACAATCCTATGCAAACTCAGCTAATGCTCAGGTGGCTGGGATGGGTGGAAGTGCAAGTGATGCAACAATTCAACAATCTGTCTAA
Protein sequence

>Msa1208520

MEHSEEIDLAATVSNAEEPQLGSEVQQSSPVDHHSPPSDLNQTVQKNDDELAVELHEKLDLKVEDEGVVETDDKVSNFNDGEVVSDERGAEIDDKVWNFNDGERVGDERGAETDDKVLNFDDGERVGDEESLKGEKEDEEESVKGENEEFVEGEERVDVDGDSKGWDTNSWNENVNEELGGGRDADDWGYGGGDGGGAGYGAEYGDGYGDGYGYGDEKEEKSSDGTHQFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENAGQTECKYYQRSGGCKFGKACKYNHSRGFTAPISELNFLGLPIRLGERECPYYMRTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGSVSLRGVSQQPVASWSSSRKLNETPFAPLMPTPTQGLAPQTSDWNGYQAPAYLSERIMHPSSTYVMNNPTIETNVYMHHQKQMPFEVFPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACRFDHPESALPLMMPGLGQQSYANSANAQVAGMGGSASDATIQQSV*