Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220430 | KEH32536.1 | 69.876 | 322 | 22 | 5 | 134 | 382 | 66 | 385 | 9.22e-127 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220430 | sp|Q651V6|PIN2_ORYSJ | 49.684 | 316 | 85 | 9 | 134 | 382 | 66 | 374 | 9.92e-77 | 252 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1220430 | Msa1394350 | 0.859828 | 3.156800e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220430 | MtrunA17_Chr4g0071571 | 69.876 | 322 | 22 | 5 | 134 | 382 | 66 | 385 | 3.38e-130 | 387 |
| Msa1220430 | MtrunA17_Chr4g0071551 | 93.333 | 135 | 9 | 0 | 134 | 268 | 66 | 200 | 6.35e-86 | 260 |
| Msa1220430 | MtrunA17_Chr7g0255941 | 48.276 | 290 | 98 | 7 | 135 | 379 | 67 | 349 | 7.27e-69 | 228 |
| Msa1220430 | MtrunA17_Chr4g0044181 | 43.252 | 326 | 103 | 6 | 134 | 378 | 66 | 390 | 8.13e-69 | 229 |
| Msa1220430 | MtrunA17_Chr7g0252861 | 89.147 | 129 | 4 | 2 | 1 | 119 | 38 | 166 | 2.33e-68 | 223 |
| Msa1220430 | MtrunA17_Chr6g0478431 | 45.724 | 304 | 102 | 8 | 135 | 376 | 67 | 369 | 1.33e-66 | 222 |
| Msa1220430 | MtrunA17_Chr1g0160461 | 45.455 | 286 | 102 | 5 | 135 | 367 | 67 | 351 | 8.93e-66 | 220 |
| Msa1220430 | MtrunA17_Chr8g0393111 | 43.542 | 271 | 99 | 9 | 135 | 367 | 67 | 321 | 1.03e-54 | 189 |
| Msa1220430 | MtrunA17_Chr6g0461671 | 74.359 | 117 | 27 | 1 | 6 | 119 | 63 | 179 | 8.33e-50 | 175 |
| Msa1220430 | MtrunA17_Chr4g0015031 | 58.088 | 136 | 46 | 2 | 1 | 125 | 24 | 159 | 1.03e-42 | 155 |
| Msa1220430 | MtrunA17_Chr1g0159341 | 60.145 | 138 | 50 | 4 | 135 | 270 | 67 | 201 | 2.05e-42 | 155 |
| Msa1220430 | MtrunA17_Chr7g0252891 | 57.692 | 130 | 44 | 2 | 1 | 119 | 35 | 164 | 2.73e-41 | 152 |
| Msa1220430 | MtrunA17_Chr7g0252881 | 61.017 | 118 | 43 | 1 | 5 | 119 | 26 | 143 | 2.86e-41 | 151 |
| Msa1220430 | MtrunA17_Chr7g0252911 | 61.864 | 118 | 42 | 1 | 5 | 119 | 26 | 143 | 9.78e-41 | 150 |
| Msa1220430 | MtrunA17_Chr7g0252921 | 59.322 | 118 | 45 | 1 | 5 | 119 | 25 | 142 | 8.91e-39 | 144 |
| Msa1220430 | MtrunA17_Chr2g0298971 | 36.752 | 234 | 116 | 6 | 124 | 340 | 54 | 272 | 1.52e-36 | 139 |
| Msa1220430 | MtrunA17_Chr7g0249141 | 41.026 | 117 | 65 | 3 | 135 | 249 | 67 | 181 | 1.10e-18 | 86.7 |
| Msa1220430 | MtrunA17_Chr6g0452821 | 48.421 | 95 | 49 | 0 | 132 | 226 | 64 | 158 | 6.42e-18 | 84.3 |
| Msa1220430 | MtrunA17_Chr7g0216571 | 48.980 | 98 | 45 | 2 | 132 | 227 | 75 | 169 | 1.25e-17 | 83.6 |
| Msa1220430 | MtrunA17_Chr4g0071561 | 58.442 | 77 | 29 | 2 | 279 | 354 | 55 | 129 | 1.06e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220430 | AT5G57090.1 | 85.926 | 135 | 18 | 1 | 134 | 268 | 66 | 199 | 1.53e-72 | 239 |
| Msa1220430 | AT5G57090.1 | 55.446 | 101 | 37 | 2 | 290 | 382 | 303 | 403 | 8.67e-21 | 95.1 |
| Msa1220430 | AT2G01420.3 | 45.779 | 308 | 91 | 7 | 134 | 376 | 66 | 362 | 2.60e-69 | 228 |
| Msa1220430 | AT2G01420.2 | 45.779 | 308 | 91 | 7 | 134 | 376 | 66 | 362 | 1.21e-68 | 228 |
| Msa1220430 | AT1G70940.1 | 44.551 | 312 | 97 | 6 | 134 | 376 | 66 | 370 | 1.37e-68 | 228 |
| Msa1220430 | AT2G01420.1 | 45.779 | 308 | 91 | 7 | 134 | 376 | 66 | 362 | 1.53e-68 | 228 |
| Msa1220430 | AT1G23080.2 | 44.771 | 306 | 96 | 6 | 134 | 376 | 66 | 361 | 2.65e-68 | 225 |
| Msa1220430 | AT1G23080.1 | 45.215 | 303 | 99 | 6 | 134 | 376 | 66 | 361 | 9.29e-68 | 226 |
| Msa1220430 | AT1G23080.3 | 45.215 | 303 | 99 | 6 | 134 | 376 | 66 | 361 | 1.02e-67 | 226 |
| Msa1220430 | AT1G23080.4 | 45.215 | 303 | 99 | 6 | 134 | 376 | 66 | 361 | 1.02e-67 | 226 |
| Msa1220430 | AT1G73590.1 | 45.426 | 317 | 98 | 6 | 134 | 376 | 66 | 381 | 1.61e-66 | 223 |
| Msa1220430 | AT5G57090.2 | 90.816 | 98 | 9 | 0 | 171 | 268 | 2 | 99 | 2.48e-53 | 186 |
| Msa1220430 | AT5G57090.2 | 55.446 | 101 | 37 | 2 | 290 | 382 | 203 | 303 | 1.26e-20 | 94.4 |
| Msa1220430 | AT1G77110.2 | 45.685 | 197 | 97 | 6 | 135 | 323 | 67 | 261 | 1.29e-42 | 157 |
| Msa1220430 | AT1G77110.1 | 45.685 | 197 | 97 | 6 | 135 | 323 | 67 | 261 | 1.47e-42 | 157 |
| Msa1220430 | AT5G18280.1 | 64.957 | 117 | 38 | 1 | 6 | 119 | 53 | 169 | 3.28e-38 | 144 |
| Msa1220430 | AT3G04080.1 | 61.538 | 117 | 42 | 1 | 6 | 119 | 52 | 168 | 4.09e-35 | 135 |
| Msa1220430 | AT5G16530.2 | 39.597 | 149 | 77 | 3 | 135 | 283 | 67 | 202 | 1.52e-21 | 95.1 |
| Msa1220430 | AT5G16530.1 | 39.597 | 149 | 77 | 3 | 135 | 283 | 67 | 202 | 2.89e-21 | 94.7 |
| Msa1220430 | AT5G15100.1 | 48.235 | 85 | 39 | 1 | 157 | 241 | 93 | 172 | 8.16e-17 | 81.6 |
Find 142 sgRNAs with CRISPR-Local
Find 630 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCAAATCCTATGCTTTC+TGG | 0.083914 | 8_1:-83622152 | Msa1220430:CDS |
| CAAGAACGTTTGGCTGAATT+TGG | 0.087403 | 8_1:-83617090 | Msa1220430:CDS |
| TGCAGGCAACTGCAGGTTTA+AGG | 0.182550 | 8_1:-83623834 | Msa1220430:intron |
| TCAAATTAACAGCATGATTT+CGG | 0.216162 | 8_1:-83624899 | Msa1220430:five_prime_UTR |
| CAAATTAACAGCATGATTTC+GGG | 0.235105 | 8_1:-83624898 | Msa1220430:five_prime_UTR |
| GGAATCTTTGGTTTCACTTT+TGG | 0.255771 | 8_1:-83624004 | Msa1220430:CDS |
| AGTTGGACGTTTGAGCATTT+TGG | 0.261699 | 8_1:+83624604 | None:intergenic |
| CAAATTCAGCCAAACGTTCT+TGG | 0.281907 | 8_1:+83617091 | None:intergenic |
| TTGTTCTGCAAAGTGTTATT+TGG | 0.283570 | 8_1:-83622588 | Msa1220430:CDS |
| CTTCAAACTGATGCTGAAAT+AGG | 0.286348 | 8_1:-83622430 | Msa1220430:CDS |
| ATGTGTAACTCCTTGTTATT+AGG | 0.289274 | 8_1:+83622071 | None:intergenic |
| TCTTCCTAACACACTTGTTA+TGG | 0.291487 | 8_1:-83622671 | Msa1220430:CDS |
| AATCCTTACTCTACACATTA+TGG | 0.293486 | 8_1:-83624998 | Msa1220430:five_prime_UTR |
| GATCATTGGAAGATATAAAA+TGG | 0.301610 | 8_1:+83622831 | None:intergenic |
| GAGAAGAGTAATGGAGAATC+TGG | 0.307773 | 8_1:+83624931 | None:intergenic |
| CCGGTTAGAACCCTTCATTC+AGG | 0.332577 | 8_1:+83624789 | None:intergenic |
| ATCAACTTTGAATGATGTTA+TGG | 0.339187 | 8_1:+83622486 | None:intergenic |
| TACTACTCTCAAACAATATC+AGG | 0.342401 | 8_1:-83624734 | Msa1220430:five_prime_UTR |
| TCTGATGTTGTTTCGCTTAA+CGG | 0.342671 | 8_1:-83622463 | Msa1220430:CDS |
| GCAGCAAGCAGCGGAATCTT+TGG | 0.343563 | 8_1:-83624016 | Msa1220430:CDS |
| CTTCCTAACACACTTGTTAT+GGG | 0.344721 | 8_1:-83622670 | Msa1220430:CDS |
| AACTGCAGGTTTAAGGGCTT+TGG | 0.359320 | 8_1:-83623827 | Msa1220430:CDS |
| GAGATTACGCACTTCTTAAT+CGG | 0.368496 | 8_1:-83624470 | Msa1220430:CDS |
| GAACCAGAAAGCATAGGATT+TGG | 0.370922 | 8_1:+83622149 | None:intergenic |
| TTTGGGTTGTTGGTTCTGTT+TGG | 0.372030 | 8_1:-83617072 | Msa1220430:CDS |
| TTAAGATTCCCTTCAGAAAC+AGG | 0.372767 | 8_1:+83622023 | None:intergenic |
| CAAAGACACCAGTTCGAGTT+GGG | 0.390510 | 8_1:-83623945 | Msa1220430:CDS |
| GCAGGCAACTGCAGGTTTAA+GGG | 0.398221 | 8_1:-83623833 | Msa1220430:intron |
| AGGAGTTACACATGTTTGTT+TGG | 0.398785 | 8_1:-83622061 | Msa1220430:CDS |
| ATTGTTTGAGAGTAGTATTA+AGG | 0.400762 | 8_1:+83624740 | None:intergenic |
| GGCAATCTCAATCTAATGTT+TGG | 0.401491 | 8_1:-83624768 | Msa1220430:five_prime_UTR |
| GTCTGCATGCCAAGAACGTT+TGG | 0.416469 | 8_1:-83617100 | Msa1220430:CDS |
| ATTCCCATAACAAGTGTGTT+AGG | 0.421389 | 8_1:+83622667 | None:intergenic |
| GATAGCATGGGTGGTGGAAG+TGG | 0.427657 | 8_1:-83622101 | Msa1220430:CDS |
| TTTGGCTGAATTTGGGTTGT+TGG | 0.428779 | 8_1:-83617082 | Msa1220430:CDS |
| AAACATTAGATTGAGATTGC+CGG | 0.431172 | 8_1:+83624770 | None:intergenic |
| ACGGAATCTGTAGATCTTAT+CGG | 0.432095 | 8_1:+83624565 | None:intergenic |
| TGCATAAGAAGAGGGGAGGG+AGG | 0.434830 | 8_1:-83622217 | Msa1220430:CDS |
| TGGCCGTTGGATGTGGTGGC+AGG | 0.434886 | 8_1:+83624706 | None:intergenic |
| CCACACACCCCAACTCGAAC+TGG | 0.445500 | 8_1:+83623937 | None:intergenic |
| TAATGTGTAGAGTAAGGATT+AGG | 0.445991 | 8_1:+83625001 | None:intergenic |
| TGTGTTAGGAAGAGTTGAAA+GGG | 0.446908 | 8_1:+83622681 | None:intergenic |
| AAAACCAAGATAGTCTTGAT+TGG | 0.450593 | 8_1:-83622720 | Msa1220430:CDS |
| AAGAACGTTTGGCTGAATTT+GGG | 0.455398 | 8_1:-83617089 | Msa1220430:CDS |
| CATCCATAATGTGTAGAGTA+AGG | 0.457297 | 8_1:+83624995 | None:intergenic |
| AGGTTTAAGGGCTTTGGAAG+GGG | 0.457955 | 8_1:-83623821 | Msa1220430:CDS |
| GCTCAAACGTCCAACTCGTC+AGG | 0.458315 | 8_1:-83624597 | Msa1220430:five_prime_UTR |
| ACCCTTCATTCAGGCACACC+AGG | 0.460923 | 8_1:+83624798 | None:intergenic |
| GTGAATCAGCTGCTAAGAAA+TGG | 0.462800 | 8_1:+83622794 | None:intergenic |
| CTTTCTGGTTCTACAAGTGC+TGG | 0.462832 | 8_1:-83622137 | Msa1220430:CDS |
| TTTGCATTTGAGAAGAGTAA+TGG | 0.463301 | 8_1:+83624922 | None:intergenic |
| TGGTCCAATCAAGACTATCT+TGG | 0.466921 | 8_1:+83622716 | None:intergenic |
| AGTGGTGAGTTGTTCAATAA+TGG | 0.467127 | 8_1:-83622188 | Msa1220430:CDS |
| AGTCCTCGGAGTAGCCCCTT+TGG | 0.467482 | 8_1:+83622304 | None:intergenic |
| CCCCTGGTGTGCCTGAATGA+AGG | 0.477380 | 8_1:-83624800 | Msa1220430:five_prime_UTR |
| AAGCGGAAGGTGTTGTTCCA+TGG | 0.478410 | 8_1:-83623978 | Msa1220430:CDS |
| ATGGGTGGTGGAAGTGGTAA+TGG | 0.481285 | 8_1:-83622095 | Msa1220430:CDS |
| TAATTCATAGCAAGGATCAT+TGG | 0.481448 | 8_1:+83622817 | None:intergenic |
| AAACTAGAGCCTCTTGGAGT+TGG | 0.484261 | 8_1:+83622330 | None:intergenic |
| GTCTTTGATCGCAATTCCCA+TGG | 0.492227 | 8_1:+83623961 | None:intergenic |
| CAGGTTTAAGGGCTTTGGAA+GGG | 0.494592 | 8_1:-83623822 | Msa1220430:CDS |
| CTGACCGTGGCCGTTGGATG+TGG | 0.495023 | 8_1:+83624699 | None:intergenic |
| TGGTTAAAACTAGAGCCTCT+TGG | 0.498874 | 8_1:+83622324 | None:intergenic |
| ATTAAGAAGTGCGTAATCTC+CGG | 0.499147 | 8_1:+83624473 | None:intergenic |
| GTGTGTTAGGAAGAGTTGAA+AGG | 0.500046 | 8_1:+83622680 | None:intergenic |
| CCTGAATGAAGGGTTCTAAC+CGG | 0.500559 | 8_1:-83624789 | Msa1220430:five_prime_UTR |
| CCAGAAAGCATAGGATTTGG+AGG | 0.501646 | 8_1:+83622152 | None:intergenic |
| TCTTCGCAATTTGAAGTCCT+CGG | 0.505766 | 8_1:+83622260 | None:intergenic |
| ACAAATGTGATGAGAAGGAT+AGG | 0.512412 | 8_1:+83624518 | None:intergenic |
| CCTTCGAAATTTGAAGTCCT+CGG | 0.514043 | 8_1:+83622290 | None:intergenic |
| GGATGCATAAGAAGAGGGGA+GGG | 0.515503 | 8_1:-83622220 | Msa1220430:CDS |
| AAGAAAGATAGCATGGGTGG+TGG | 0.522398 | 8_1:-83622107 | Msa1220430:CDS |
| AGTGCTTCACCTGTTTCTGA+AGG | 0.523459 | 8_1:-83622032 | Msa1220430:CDS |
| AGAAGAGTAATGGAGAATCT+GGG | 0.524757 | 8_1:+83624932 | None:intergenic |
| CGAGGACTTCAAATTTCGAA+GGG | 0.525462 | 8_1:-83622289 | Msa1220430:CDS |
| CTACACATTATGGATGGAAG+TGG | 0.527135 | 8_1:-83624988 | Msa1220430:five_prime_UTR |
| AGCGGAAGGTGTTGTTCCAT+GGG | 0.527585 | 8_1:-83623977 | Msa1220430:CDS |
| CACAAAGAAGAAAGATAGCA+TGG | 0.528645 | 8_1:-83622114 | Msa1220430:CDS |
| GCGGAGAGTTCGACGGAGGA+AGG | 0.529188 | 8_1:+83624661 | None:intergenic |
| GCAGGTTTAAGGGCTTTGGA+AGG | 0.529646 | 8_1:-83623823 | Msa1220430:CDS |
| CCGTTGGATGTGGTGGCAGG+TGG | 0.535170 | 8_1:+83624709 | None:intergenic |
| AGGATGCATAAGAAGAGGGG+AGG | 0.538999 | 8_1:-83622221 | Msa1220430:CDS |
| GCTATGTATGGTGATTTCTC+AGG | 0.545619 | 8_1:-83622631 | Msa1220430:CDS |
| AGGGGAGGGAGGAGTATGAG+TGG | 0.545646 | 8_1:-83622206 | Msa1220430:CDS |
| ACCGTGGCCGTTGGATGTGG+TGG | 0.548274 | 8_1:+83624702 | None:intergenic |
| CGGAGGAAGGTGATCGGTAA+CGG | 0.550078 | 8_1:+83624674 | None:intergenic |
| GTGGTGATGCAGGCAACTGC+AGG | 0.557963 | 8_1:-83623841 | Msa1220430:intron |
| GAGAGTGACTCCTGACGAGT+TGG | 0.560863 | 8_1:+83624587 | None:intergenic |
| GCCACCACATCCAACGGCCA+CGG | 0.561052 | 8_1:-83624703 | Msa1220430:five_prime_UTR |
| CCACCTGCCACCACATCCAA+CGG | 0.562179 | 8_1:-83624709 | Msa1220430:five_prime_UTR |
| AGAAATGGTAATTCATAGCA+AGG | 0.563456 | 8_1:+83622809 | None:intergenic |
| ATTTCAGCATCAGTTTGAAG+TGG | 0.563565 | 8_1:+83622433 | None:intergenic |
| CCCTGGTGTGCCTGAATGAA+GGG | 0.563931 | 8_1:-83624799 | Msa1220430:five_prime_UTR |
| CCGAGGACTTCAAATTTCGA+AGG | 0.565058 | 8_1:-83622290 | Msa1220430:CDS |
| ATTGAGGATGCATAAGAAGA+GGG | 0.566567 | 8_1:-83622225 | Msa1220430:CDS |
| AATTTAGATCTTGTTCACAT+TGG | 0.568868 | 8_1:-83624360 | Msa1220430:CDS |
| ATAAAATGGAAAGATAGTAA+TGG | 0.571283 | 8_1:+83622845 | None:intergenic |
| AAAGATTCCGCTGCTTGCTG+CGG | 0.571438 | 8_1:+83624018 | None:intergenic |
| TTTGGTGAATTCGGAGTCGG+AGG | 0.571700 | 8_1:+83624622 | None:intergenic |
| TCAAAGACACCAGTTCGAGT+TGG | 0.572147 | 8_1:-83623946 | Msa1220430:CDS |
| ATTCGGAGTCGGAGGAGAAG+TGG | 0.573474 | 8_1:+83624630 | None:intergenic |
| GTGTTTATCATACATACTAA+AGG | 0.574617 | 8_1:-83624848 | Msa1220430:five_prime_UTR |
| GATGCTGAAATAGGTGAAGA+TGG | 0.576751 | 8_1:-83622421 | Msa1220430:intron |
| CTTACTCTACACATTATGGA+TGG | 0.580236 | 8_1:-83624994 | Msa1220430:five_prime_UTR |
| GTGCTTTATATGATGCCGTC+CGG | 0.580449 | 8_1:-83624492 | Msa1220430:exon |
| GAAAGCATAGGATTTGGAGG+AGG | 0.582023 | 8_1:+83622155 | None:intergenic |
| TGAGCATACGCACTCAAACC+AGG | 0.584096 | 8_1:+83624045 | None:intergenic |
| CATACATAGCTCTTAAAAGA+GGG | 0.587601 | 8_1:+83622644 | None:intergenic |
| CGGAGGAGAAGTGGATTGAA+CGG | 0.588870 | 8_1:+83624639 | None:intergenic |
| CCATACATAGCTCTTAAAAG+AGG | 0.589751 | 8_1:+83622643 | None:intergenic |
| TGAAAGGGAGAAAAGTGTAA+TGG | 0.590561 | 8_1:+83622696 | None:intergenic |
| ACAGCACAAATGTGATGAGA+AGG | 0.593154 | 8_1:+83624513 | None:intergenic |
| CATTGAGGATGCATAAGAAG+AGG | 0.597713 | 8_1:-83622226 | Msa1220430:CDS |
| GTGCTTCACCTGTTTCTGAA+GGG | 0.599388 | 8_1:-83622031 | Msa1220430:CDS |
| AAAGCATAGGATTTGGAGGA+GGG | 0.604256 | 8_1:+83622156 | None:intergenic |
| ATAATGACGCAATCAACCCC+TGG | 0.608332 | 8_1:-83624816 | Msa1220430:five_prime_UTR |
| GTTCGACGGAGGAAGGTGAT+CGG | 0.608673 | 8_1:+83624668 | None:intergenic |
| CCCTTCATTCAGGCACACCA+GGG | 0.615855 | 8_1:+83624799 | None:intergenic |
| AAAGACACCAGTTCGAGTTG+GGG | 0.616668 | 8_1:-83623944 | Msa1220430:intron |
| CAAATGTGATGAGAAGGATA+GGG | 0.622119 | 8_1:+83624519 | None:intergenic |
| TCAGAAACCGCAGCAAGCAG+CGG | 0.624986 | 8_1:-83624025 | Msa1220430:CDS |
| TGATTTCTCAGGAAATCTCA+TGG | 0.626161 | 8_1:-83622620 | Msa1220430:CDS |
| CTTGTAGAACCAGAAAGCAT+AGG | 0.628500 | 8_1:+83622143 | None:intergenic |
| ATTTGATAAGATATTGCAAG+CGG | 0.629667 | 8_1:-83623794 | Msa1220430:intron |
| GGTGAGTTGTTCAATAATGG+TGG | 0.635458 | 8_1:-83622185 | Msa1220430:CDS |
| TTGAACGGCGGAGAGTTCGA+CGG | 0.643014 | 8_1:+83624654 | None:intergenic |
| GATAAGATCTACAGATTCCG+TGG | 0.643142 | 8_1:-83624563 | Msa1220430:five_prime_UTR |
| ATCGGTAACGGATCTGACCG+TGG | 0.644280 | 8_1:+83624686 | None:intergenic |
| TCAAGAGAACCAACTCCAAG+AGG | 0.646233 | 8_1:-83622339 | Msa1220430:intron |
| AAGATGAGACATTGACATTG+AGG | 0.656036 | 8_1:-83622241 | Msa1220430:CDS |
| AAGAAGAAAGATAGCATGGG+TGG | 0.662615 | 8_1:-83622110 | Msa1220430:CDS |
| TGGTAATGGACCTAATAACA+AGG | 0.666402 | 8_1:-83622081 | Msa1220430:CDS |
| ACAAAGAAGAAAGATAGCAT+GGG | 0.672441 | 8_1:-83622113 | Msa1220430:CDS |
| TAACCAAAGGGGCTACTCCG+AGG | 0.672738 | 8_1:-83622307 | Msa1220430:CDS |
| TTGAGGATGCATAAGAAGAG+GGG | 0.674550 | 8_1:-83622224 | Msa1220430:CDS |
| GAGGACTTCAAATTTCGAAG+GGG | 0.687103 | 8_1:-83622288 | Msa1220430:CDS |
| AGAAGTGCGTAATCTCCGGA+CGG | 0.689054 | 8_1:+83624477 | None:intergenic |
| AAACAACAAGAAGAGTGCCA+CGG | 0.689245 | 8_1:+83624546 | None:intergenic |
| AACGGCGGAGAGTTCGACGG+AGG | 0.690782 | 8_1:+83624657 | None:intergenic |
| ATTTCGAAGGGGCTACTCCG+AGG | 0.691389 | 8_1:-83622277 | Msa1220430:CDS |
| CCTTCATTCAGGCACACCAG+GGG | 0.698561 | 8_1:+83624800 | None:intergenic |
| AGGAGAAGTGGATTGAACGG+CGG | 0.721406 | 8_1:+83624642 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAGAACAAATTTTTTTTA+GGG | + | chr8_1:83617249-83617268 | None:intergenic | 10.0% |
| !! | TATTCCATAAAATAAAAAAA+TGG | - | chr8_1:83617845-83617864 | Msa1220430:intron | 10.0% |
| !!! | TTTTTTTTTTTGAAACAAAA+AGG | - | chr8_1:83620367-83620386 | Msa1220430:intron | 10.0% |
| !! | TAAATACTACTAATAAAAAA+AGG | - | chr8_1:83623449-83623468 | Msa1220430:intron | 10.0% |
| !! | GTAATAAAAAAAAATTACAT+GGG | - | chr8_1:83623712-83623731 | Msa1220430:intron | 10.0% |
| !! | TAATAAAAAAAAATTACATG+GGG | - | chr8_1:83623713-83623732 | Msa1220430:intron | 10.0% |
| !!! | TTTGTTTATAATTTTTCAAT+GGG | + | chr8_1:83623775-83623794 | None:intergenic | 10.0% |
| !!! | ATTTGTTTATAATTTTTCAA+TGG | + | chr8_1:83623776-83623795 | None:intergenic | 10.0% |
| !! | ATTGAAAAATTATAAACAAA+TGG | - | chr8_1:83623775-83623794 | Msa1220430:intron | 10.0% |
| !! | TAAATAAGAATAAGAATAAT+AGG | + | chr8_1:83623996-83624015 | None:intergenic | 10.0% |
| !!! | ATTTTAAAATGAAATAATTG+AGG | - | chr8_1:83624310-83624329 | Msa1220430:intron | 10.0% |
| !! | TATTAAAATTATTAAAAACC+AGG | - | chr8_1:83624338-83624357 | Msa1220430:CDS | 10.0% |
| !!! | CAATAGAACAAATTTTTTTT+AGG | + | chr8_1:83617250-83617269 | None:intergenic | 15.0% |
| !!! | TGTTCCATTTTTTTATTTTA+TGG | + | chr8_1:83617852-83617871 | None:intergenic | 15.0% |
| !!! | AAATTTGAAATGAATTTATG+TGG | - | chr8_1:83618261-83618280 | Msa1220430:intron | 15.0% |
| !!! | TGAATTCATCTATTTTTTTA+TGG | - | chr8_1:83618591-83618610 | Msa1220430:intron | 15.0% |
| !! | ATGAGTAATAATTGATTATA+AGG | + | chr8_1:83618797-83618816 | None:intergenic | 15.0% |
| !!! | TGAAAGTTGATATATTTATA+GGG | + | chr8_1:83620272-83620291 | None:intergenic | 15.0% |
| !!! | ATGAAAGTTGATATATTTAT+AGG | + | chr8_1:83620273-83620292 | None:intergenic | 15.0% |
| !! | ATAGTATGAATCATATTATT+AGG | - | chr8_1:83622694-83622713 | Msa1220430:CDS | 15.0% |
| !! | ATAACATTACATAAACTTAT+TGG | - | chr8_1:83622973-83622992 | Msa1220430:intron | 15.0% |
| !!! | TTAAATTTTTTTAGAGTCAT+TGG | - | chr8_1:83623404-83623423 | Msa1220430:intron | 15.0% |
| !!! | AAATTTTGTAATTTGATGAA+GGG | + | chr8_1:83623573-83623592 | None:intergenic | 15.0% |
| !! | CGTAATAAAAAAAAATTACA+TGG | - | chr8_1:83623711-83623730 | Msa1220430:intron | 15.0% |
| !! | AATAAAAAAAAATTACATGG+GGG | - | chr8_1:83623714-83623733 | Msa1220430:intron | 15.0% |
| !! | TTTGTAAAAGCAAAATTTAT+TGG | - | chr8_1:83624103-83624122 | Msa1220430:intron | 15.0% |
| !! | TTGTAAAAGCAAAATTTATT+GGG | - | chr8_1:83624104-83624123 | Msa1220430:intron | 15.0% |
| !! | TCTCGTTTAATTATAAACAT+AGG | - | chr8_1:83618897-83618916 | Msa1220430:intron | 20.0% |
| !!! | GTGTATAAATTTGTTTAAGA+AGG | + | chr8_1:83618987-83619006 | None:intergenic | 20.0% |
| !! | ATAAAATGGAAAGATAGTAA+TGG | + | chr8_1:83619279-83619298 | None:intergenic | 20.0% |
| !!! | AAATTTCTTTTTGTAGTCTT+GGG | - | chr8_1:83622306-83622325 | Msa1220430:CDS | 20.0% |
| !!! | ACTTTTTCTATACTCATTAA+TGG | + | chr8_1:83622652-83622671 | None:intergenic | 20.0% |
| !! | ATACTATTATGCAATGTATT+AGG | + | chr8_1:83622681-83622700 | None:intergenic | 20.0% |
| !! | AATATAGTGAAAAGTTTCAA+AGG | - | chr8_1:83622831-83622850 | Msa1220430:CDS | 20.0% |
| !!! | TGGAATTCATTGATAATATT+AGG | - | chr8_1:83622901-83622920 | Msa1220430:intron | 20.0% |
| !!! | AAGAATTTGCTTAATTCTAT+TGG | - | chr8_1:83622924-83622943 | Msa1220430:intron | 20.0% |
| !!! | AATTGAAGATTATTTGGTTT+TGG | - | chr8_1:83623547-83623566 | Msa1220430:intron | 20.0% |
| !!! | GAAATTTTGTAATTTGATGA+AGG | + | chr8_1:83623574-83623593 | None:intergenic | 20.0% |
| !! | ATAAGAATAAGAATAATAGG+TGG | + | chr8_1:83623993-83624012 | None:intergenic | 20.0% |
| !!! | GGAAAAAAAATCATGAATTT+TGG | - | chr8_1:83624262-83624281 | Msa1220430:intron | 20.0% |
| !!! | AATTAACCAAATTGATTCAA+AGG | + | chr8_1:83624708-83624727 | None:intergenic | 20.0% |
| !! | TTTGTCAAATTCTCTTTATA+TGG | + | chr8_1:83624784-83624803 | None:intergenic | 20.0% |
| !! | AAATGCAGTAAATTAAATTG+CGG | + | chr8_1:83624990-83625009 | None:intergenic | 20.0% |
| !! | AATCTTTGACCAATTTTTGA+AGG | - | chr8_1:83617095-83617114 | Msa1220430:CDS | 25.0% |
| !! | ATCTTTGACCAATTTTTGAA+GGG | - | chr8_1:83617096-83617115 | Msa1220430:CDS | 25.0% |
| ! | TCAAATTAACAGCATGATTT+CGG | - | chr8_1:83617222-83617241 | Msa1220430:intron | 25.0% |
| ! | GTGTTTATCATACATACTAA+AGG | - | chr8_1:83617273-83617292 | Msa1220430:intron | 25.0% |
| ! | ATTGTTTGAGAGTAGTATTA+AGG | + | chr8_1:83617384-83617403 | None:intergenic | 25.0% |
| ! | CAAAATGAAAAACATGAACA+CGG | + | chr8_1:83617736-83617755 | None:intergenic | 25.0% |
| ! | AATTTAGATCTTGTTCACAT+TGG | - | chr8_1:83617761-83617780 | Msa1220430:intron | 25.0% |
| !! | GGAACAATTTGCATTTTATT+AGG | - | chr8_1:83617866-83617885 | Msa1220430:intron | 25.0% |
| ! | GATATACAATTAAGCACAAT+AGG | - | chr8_1:83617972-83617991 | Msa1220430:intron | 25.0% |
| !!! | TTTGTGTGTTGTTTTTATGA+AGG | - | chr8_1:83618238-83618257 | Msa1220430:intron | 25.0% |
| ! | ATTTGATAAGATATTGCAAG+CGG | - | chr8_1:83618327-83618346 | Msa1220430:intron | 25.0% |
| ! | TTATTCAAATACACTCTTTG+CGG | - | chr8_1:83618496-83618515 | Msa1220430:intron | 25.0% |
| ! | GATGTGGAGATTAATTAAAA+GGG | + | chr8_1:83618651-83618670 | None:intergenic | 25.0% |
| ! | TGATGTGGAGATTAATTAAA+AGG | + | chr8_1:83618652-83618671 | None:intergenic | 25.0% |
| ! | AATTGATTATAAGGCTAAGT+AGG | + | chr8_1:83618788-83618807 | None:intergenic | 25.0% |
| ! | ATTTGTTTAAGAAGGAAACA+TGG | + | chr8_1:83618979-83618998 | None:intergenic | 25.0% |
| ! | CAGAGAAATTGTTATAACTA+GGG | + | chr8_1:83619028-83619047 | None:intergenic | 25.0% |
| ! | ACAGAGAAATTGTTATAACT+AGG | + | chr8_1:83619029-83619048 | None:intergenic | 25.0% |
| ! | AATATCATAGCAACATATAG+CGG | + | chr8_1:83619171-83619190 | None:intergenic | 25.0% |
| ! | TTTATTCCATAACATTGATC+TGG | + | chr8_1:83619231-83619250 | None:intergenic | 25.0% |
| !! | TTATGGAATAAACCATTTTG+TGG | - | chr8_1:83619239-83619258 | Msa1220430:intron | 25.0% |
| ! | GATCATTGGAAGATATAAAA+TGG | + | chr8_1:83619293-83619312 | None:intergenic | 25.0% |
| ! | ATCAACTTTGAATGATGTTA+TGG | + | chr8_1:83619638-83619657 | None:intergenic | 25.0% |
| !! | ATTTTCATGTGGAACATATT+TGG | + | chr8_1:83620174-83620193 | None:intergenic | 25.0% |
| ! | GAAAATATTGTTGCATCAAA+AGG | - | chr8_1:83620188-83620207 | Msa1220430:intron | 25.0% |
| ! | AGAATGTCATGAATATACAT+TGG | - | chr8_1:83620405-83620424 | Msa1220430:intron | 25.0% |
| ! | GAATGTCATGAATATACATT+GGG | - | chr8_1:83620406-83620425 | Msa1220430:intron | 25.0% |
| ! | ACATTTGTCAAAGAGTAATT+TGG | - | chr8_1:83620539-83620558 | Msa1220430:intron | 25.0% |
| ! | TAGATCTTATCTTGGTTTAA+TGG | + | chr8_1:83620583-83620602 | None:intergenic | 25.0% |
| !! | TTTTCAGCATTACTGTTATT+TGG | - | chr8_1:83621392-83621411 | Msa1220430:intron | 25.0% |
| ! | CTTGAAACATCTAGAAATTA+GGG | - | chr8_1:83621853-83621872 | Msa1220430:intron | 25.0% |
| !! | ATCTAGAAATTAGGGATTTT+GGG | - | chr8_1:83621861-83621880 | Msa1220430:intron | 25.0% |
| ! | TAAAAACAAAATGCATTGGA+CGG | + | chr8_1:83621996-83622015 | None:intergenic | 25.0% |
| !! | GAAAAATGTTTGTCTTTTGA+AGG | + | chr8_1:83622151-83622170 | None:intergenic | 25.0% |
| ! | GAATTTGGAAAAAGCTTAAA+GGG | + | chr8_1:83622180-83622199 | None:intergenic | 25.0% |
| ! | AGAATTTGGAAAAAGCTTAA+AGG | + | chr8_1:83622181-83622200 | None:intergenic | 25.0% |
| ! | ACTTTATCATGGATAGAATT+TGG | + | chr8_1:83622195-83622214 | None:intergenic | 25.0% |
| ! | AGACTACAAAAAGAAATTTC+AGG | + | chr8_1:83622305-83622324 | None:intergenic | 25.0% |
| !! | GAAATTTCTTTTTGTAGTCT+TGG | - | chr8_1:83622305-83622324 | Msa1220430:CDS | 25.0% |
| !!! | ACTTGTCTAGATTGATTTTT+TGG | - | chr8_1:83622356-83622375 | Msa1220430:intron | 25.0% |
| ! | ATAAAGCCTGATAGTTATTA+AGG | - | chr8_1:83622383-83622402 | Msa1220430:intron | 25.0% |
| !!! | TGACAGTATACTTTTTTGTA+GGG | + | chr8_1:83622443-83622462 | None:intergenic | 25.0% |
| !!! | ATGACAGTATACTTTTTTGT+AGG | + | chr8_1:83622444-83622463 | None:intergenic | 25.0% |
| ! | CACAAATAATGTATAGGTAA+GGG | - | chr8_1:83622569-83622588 | Msa1220430:CDS | 25.0% |
| ! | ACAAATAATGTATAGGTAAG+GGG | - | chr8_1:83622570-83622589 | Msa1220430:CDS | 25.0% |
| !! | AAATTTGGGGAGTTAATTTT+CGG | - | chr8_1:83623012-83623031 | Msa1220430:intron | 25.0% |
| ! | TTAAACATTCTTAACAATGG+TGG | + | chr8_1:83623078-83623097 | None:intergenic | 25.0% |
| ! | GTGTTAAACATTCTTAACAA+TGG | + | chr8_1:83623081-83623100 | None:intergenic | 25.0% |
| !!! | AGGAATCTATTTTTTTACAG+AGG | + | chr8_1:83623520-83623539 | None:intergenic | 25.0% |
| ! | ATAATCTTCAATTACAAGGA+AGG | + | chr8_1:83623540-83623559 | None:intergenic | 25.0% |
| ! | CCAAATAATCTTCAATTACA+AGG | + | chr8_1:83623544-83623563 | None:intergenic | 25.0% |
| ! | CCTTGTAATTGAAGATTATT+TGG | - | chr8_1:83623541-83623560 | Msa1220430:intron | 25.0% |
| !! | TGAAATTTGCTCAAATTACA+GGG | + | chr8_1:83623610-83623629 | None:intergenic | 25.0% |
| ! | CTTGTAATTTGAAGATTCTT+TGG | + | chr8_1:83623689-83623708 | None:intergenic | 25.0% |
| ! | CAAAGAATCTTCAAATTACA+AGG | - | chr8_1:83623687-83623706 | Msa1220430:intron | 25.0% |
| ! | TTGTAAATGGTTTAGATACT+TGG | + | chr8_1:83623817-83623836 | None:intergenic | 25.0% |
| ! | AGTATCTAAACCATTTACAA+TGG | - | chr8_1:83623817-83623836 | Msa1220430:CDS | 25.0% |
| ! | TGTTGAATGAAAAAAACCAT+TGG | + | chr8_1:83623943-83623962 | None:intergenic | 25.0% |
| ! | ATGCATTAAATTGTGTTGAA+CGG | - | chr8_1:83624505-83624524 | Msa1220430:exon | 25.0% |
| !!! | ACGATTTTGGTTAATTTAGT+TGG | - | chr8_1:83624672-83624691 | Msa1220430:five_prime_UTR | 25.0% |
| ! | ATAGTTCCTTTGAATCAATT+TGG | - | chr8_1:83624699-83624718 | Msa1220430:five_prime_UTR | 25.0% |
| ! | AATGCAGTAAATTAAATTGC+GGG | + | chr8_1:83624989-83625008 | None:intergenic | 25.0% |
| TAATGTGTAGAGTAAGGATT+AGG | + | chr8_1:83617123-83617142 | None:intergenic | 30.0% | |
| AATCCTTACTCTACACATTA+TGG | - | chr8_1:83617123-83617142 | Msa1220430:intron | 30.0% | |
| TTTGCATTTGAGAAGAGTAA+TGG | + | chr8_1:83617202-83617221 | None:intergenic | 30.0% | |
| CAAATTAACAGCATGATTTC+GGG | - | chr8_1:83617223-83617242 | Msa1220430:intron | 30.0% | |
| AAACATTAGATTGAGATTGC+CGG | + | chr8_1:83617354-83617373 | None:intergenic | 30.0% | |
| TACTACTCTCAAACAATATC+AGG | - | chr8_1:83617387-83617406 | Msa1220430:intron | 30.0% | |
| !! | TTTGAGCATTTTGGTGAATT+CGG | + | chr8_1:83617511-83617530 | None:intergenic | 30.0% |
| !!! | TATGCTGTTATTTTTGATGC+TGG | - | chr8_1:83617707-83617726 | Msa1220430:intron | 30.0% |
| ! | AACACAATTTTCTCTGCAAT+AGG | - | chr8_1:83617812-83617831 | Msa1220430:intron | 30.0% |
| TCACCAAAATTATTTGAGTG+TGG | - | chr8_1:83617906-83617925 | Msa1220430:intron | 30.0% | |
| ! | ATGCCACACTCAAATAATTT+TGG | + | chr8_1:83617912-83617931 | None:intergenic | 30.0% |
| ! | GCATGTTAATTGATCCTTTT+TGG | - | chr8_1:83618422-83618441 | Msa1220430:intron | 30.0% |
| ! | TAAAGAGTGTGAAACCAAAA+AGG | + | chr8_1:83618439-83618458 | None:intergenic | 30.0% |
| !!! | TTTTTGGTTTCACACTCTTT+AGG | - | chr8_1:83618438-83618457 | Msa1220430:intron | 30.0% |
| !!! | TCTTTAGGTGTTAGTTTTGA+GGG | - | chr8_1:83618453-83618472 | Msa1220430:intron | 30.0% |
| GAATTCACATCTCGTAAAAA+CGG | + | chr8_1:83618578-83618597 | None:intergenic | 30.0% | |
| AATGTTGTAGTAATGTGATG+TGG | + | chr8_1:83618667-83618686 | None:intergenic | 30.0% | |
| ATGTGCATGAACGTTTATAA+TGG | - | chr8_1:83618760-83618779 | Msa1220430:intron | 30.0% | |
| TGTTAAGTCTTCTCTTATAG+AGG | + | chr8_1:83618933-83618952 | None:intergenic | 30.0% | |
| CTATCTATAACCATGATTAC+CGG | - | chr8_1:83619078-83619097 | Msa1220430:intron | 30.0% | |
| TAATTCATAGCAAGGATCAT+TGG | + | chr8_1:83619307-83619326 | None:intergenic | 30.0% | |
| AGAAATGGTAATTCATAGCA+AGG | + | chr8_1:83619315-83619334 | None:intergenic | 30.0% | |
| CTTCAAAAAGTAGTTATCCT+TGG | - | chr8_1:83619349-83619368 | Msa1220430:intron | 30.0% | |
| ! | AAAACCAAGATAGTCTTGAT+TGG | - | chr8_1:83619401-83619420 | Msa1220430:intron | 30.0% |
| CATACATAGCTCTTAAAAGA+GGG | + | chr8_1:83619480-83619499 | None:intergenic | 30.0% | |
| ! | TTGTTCTGCAAAGTGTTATT+TGG | - | chr8_1:83619533-83619552 | Msa1220430:intron | 30.0% |
| ACAAAGAAGAAAGATAGCAT+GGG | - | chr8_1:83620008-83620027 | Msa1220430:intron | 30.0% | |
| !! | ATGTGTAACTCCTTGTTATT+AGG | + | chr8_1:83620053-83620072 | None:intergenic | 30.0% |
| ! | GATGCAACAATATTTTCATG+TGG | + | chr8_1:83620185-83620204 | None:intergenic | 30.0% |
| GACGTTTGTAGGAAATTATT+TGG | + | chr8_1:83620309-83620328 | None:intergenic | 30.0% | |
| AAACAAAATTTGGATGGAAG+AGG | + | chr8_1:83620448-83620467 | None:intergenic | 30.0% | |
| ! | TCTTCCATCCAAATTTTGTT+TGG | - | chr8_1:83620447-83620466 | Msa1220430:intron | 30.0% |
| !! | CTTCCATCCAAATTTTGTTT+GGG | - | chr8_1:83620448-83620467 | Msa1220430:intron | 30.0% |
| TTATCTTGGTTTAATGGTTC+AGG | + | chr8_1:83620577-83620596 | None:intergenic | 30.0% | |
| GTTAAGGATAGATCTTATCT+TGG | + | chr8_1:83620591-83620610 | None:intergenic | 30.0% | |
| TTTGTATTCATTGACACAAC+TGG | - | chr8_1:83620965-83620984 | Msa1220430:intron | 30.0% | |
| !! | TGGTAAGGAAGTATTGATAA+TGG | - | chr8_1:83621511-83621530 | Msa1220430:intron | 30.0% |
| !! | GGTAAGGAAGTATTGATAAT+GGG | - | chr8_1:83621512-83621531 | Msa1220430:intron | 30.0% |
| CTTTAACCTTAGTAATACCT+TGG | - | chr8_1:83621624-83621643 | Msa1220430:intron | 30.0% | |
| ! | AGAAAACCAAGGTATTACTA+AGG | + | chr8_1:83621633-83621652 | None:intergenic | 30.0% |
| !! | TTAGTAATACCTTGGTTTTC+TGG | - | chr8_1:83621632-83621651 | Msa1220430:intron | 30.0% |
| AGTTTAAACTTATGTCCAAG+AGG | + | chr8_1:83621658-83621677 | None:intergenic | 30.0% | |
| AAGTTTAAACTCCTTATAGC+TGG | - | chr8_1:83621667-83621686 | Msa1220430:intron | 30.0% | |
| AGTTTAAACTCCTTATAGCT+GGG | - | chr8_1:83621668-83621687 | Msa1220430:intron | 30.0% | |
| TATGGATCATCAATAAAGGT+GGG | + | chr8_1:83621748-83621767 | None:intergenic | 30.0% | |
| ATATGGATCATCAATAAAGG+TGG | + | chr8_1:83621749-83621768 | None:intergenic | 30.0% | |
| ! | ACCTTTATTGATGATCCATA+TGG | - | chr8_1:83621748-83621767 | Msa1220430:intron | 30.0% |
| TCCATATGGATCATCAATAA+AGG | + | chr8_1:83621752-83621771 | None:intergenic | 30.0% | |
| ! | CCTAATTTCTAGATGTTTCA+AGG | + | chr8_1:83621855-83621874 | None:intergenic | 30.0% |
| CCTTGAAACATCTAGAAATT+AGG | - | chr8_1:83621852-83621871 | Msa1220430:intron | 30.0% | |
| ! | CATCTAGAAATTAGGGATTT+TGG | - | chr8_1:83621860-83621879 | Msa1220430:intron | 30.0% |
| GTTAGGTTTCAAAACTCTTA+GGG | + | chr8_1:83621936-83621955 | None:intergenic | 30.0% | |
| GGTCTAAAAACAAAATGCAT+TGG | + | chr8_1:83622000-83622019 | None:intergenic | 30.0% | |
| AAACAACTCATGTAGTAAGT+AGG | - | chr8_1:83622088-83622107 | Msa1220430:CDS | 30.0% | |
| AACAACTCATGTAGTAAGTA+GGG | - | chr8_1:83622089-83622108 | Msa1220430:CDS | 30.0% | |
| !!! | GCAGGATTTTAACTTTATCA+TGG | + | chr8_1:83622206-83622225 | None:intergenic | 30.0% |
| AAAGTTAAAATCCTGCTCTT+TGG | - | chr8_1:83622210-83622229 | Msa1220430:CDS | 30.0% | |
| GAGAACATTCCAAAATACTT+AGG | + | chr8_1:83622259-83622278 | None:intergenic | 30.0% | |
| ! | AATAACTATCAGGCTTTATC+TGG | + | chr8_1:83622382-83622401 | None:intergenic | 30.0% |
| GGATATCCTTAATAACTATC+AGG | + | chr8_1:83622392-83622411 | None:intergenic | 30.0% | |
| GCACAAATAATGTATAGGTA+AGG | - | chr8_1:83622568-83622587 | Msa1220430:CDS | 30.0% | |
| ! | GATTCTTTTTCTCCAAATAG+AGG | + | chr8_1:83622619-83622638 | None:intergenic | 30.0% |
| TTTGGAGAAAAAGAATCAGA+AGG | - | chr8_1:83622622-83622641 | Msa1220430:CDS | 30.0% | |
| ! | AGCTTATGATAGTCTTGAAT+GGG | + | chr8_1:83622755-83622774 | None:intergenic | 30.0% |
| ! | AAGCTTATGATAGTCTTGAA+TGG | + | chr8_1:83622756-83622775 | None:intergenic | 30.0% |
| TGTTGGTATTAAACTAGATG+TGG | + | chr8_1:83622782-83622801 | None:intergenic | 30.0% | |
| AAGAAAAACAATGGTCATGT+TGG | + | chr8_1:83622799-83622818 | None:intergenic | 30.0% | |
| TTCACTATATTAGAAAACCC+AGG | + | chr8_1:83622822-83622841 | None:intergenic | 30.0% | |
| AAAATAGCCTATATTACAGG+GGG | + | chr8_1:83623489-83623508 | None:intergenic | 30.0% | |
| GAAAATAGCCTATATTACAG+GGG | + | chr8_1:83623490-83623509 | None:intergenic | 30.0% | |
| CGAAAATAGCCTATATTACA+GGG | + | chr8_1:83623491-83623510 | None:intergenic | 30.0% | |
| !! | CCTGTAATATAGGCTATTTT+CGG | - | chr8_1:83623489-83623508 | Msa1220430:intron | 30.0% |
| ! | GAAATTTGCTCAAATTACAG+GGG | + | chr8_1:83623609-83623628 | None:intergenic | 30.0% |
| ! | CTGAAATTTGCTCAAATTAC+AGG | + | chr8_1:83623611-83623630 | None:intergenic | 30.0% |
| ACAAAATCGAAGATATGGTA+GGG | + | chr8_1:83623639-83623658 | None:intergenic | 30.0% | |
| TACAAAATCGAAGATATGGT+AGG | + | chr8_1:83623640-83623659 | None:intergenic | 30.0% | |
| ACTGTACAAAATCGAAGATA+TGG | + | chr8_1:83623644-83623663 | None:intergenic | 30.0% | |
| TGTACAGTCAAAATTCATGA+AGG | - | chr8_1:83623656-83623675 | Msa1220430:intron | 30.0% | |
| TTTAGATACTTGGATCATAC+AGG | + | chr8_1:83623807-83623826 | None:intergenic | 30.0% | |
| ATGTGTTGAACCATTGTAAA+TGG | + | chr8_1:83623830-83623849 | None:intergenic | 30.0% | |
| !! | TTGAAAAAGTTGGTGTTGAA+GGG | + | chr8_1:83623859-83623878 | None:intergenic | 30.0% |
| !! | ATTGAAAAAGTTGGTGTTGA+AGG | + | chr8_1:83623860-83623879 | None:intergenic | 30.0% |
| AATGAAAAAAACCATTGGAG+AGG | + | chr8_1:83623938-83623957 | None:intergenic | 30.0% | |
| AATAAGAATAATAGGTGGTG+GGG | + | chr8_1:83623988-83624007 | None:intergenic | 30.0% | |
| GAATAAGAATAATAGGTGGT+GGG | + | chr8_1:83623989-83624008 | None:intergenic | 30.0% | |
| AGAATAAGAATAATAGGTGG+TGG | + | chr8_1:83623990-83624009 | None:intergenic | 30.0% | |
| TAATCTTCTTTCCAGTGAAA+TGG | + | chr8_1:83624132-83624151 | None:intergenic | 30.0% | |
| AACCAAGTCTCTATTTATAG+AGG | - | chr8_1:83624241-83624260 | Msa1220430:intron | 30.0% | |
| TTCCTCTATAAATAGAGACT+TGG | + | chr8_1:83624246-83624265 | None:intergenic | 30.0% | |
| AGAAGAAGAATTCTGCAATA+TGG | + | chr8_1:83624393-83624412 | None:intergenic | 30.0% | |
| !!! | CGTTTTAATTGGTTCCTTTT+TGG | + | chr8_1:83624467-83624486 | None:intergenic | 30.0% |
| TAACCAAAATCGTACGTAAA+AGG | + | chr8_1:83624665-83624684 | None:intergenic | 30.0% | |
| ! | TTAATTTTGTTCAGTCACGA+GGG | - | chr8_1:83624722-83624741 | Msa1220430:five_prime_UTR | 30.0% |
| CACTTTAACTCAAAACTTGA+AGG | - | chr8_1:83624805-83624824 | Msa1220430:five_prime_UTR | 30.0% | |
| ! | CACGCAACAAAAATGTTTTA+TGG | + | chr8_1:83624927-83624946 | None:intergenic | 30.0% |
| ATGCAGTAAATTAAATTGCG+GGG | + | chr8_1:83624988-83625007 | None:intergenic | 30.0% | |
| !! | AGTTTTGCTAGGTAAGTTGA+AGG | - | chr8_1:83617063-83617082 | Msa1220430:CDS | 35.0% |
| GATTAGGACCCTTCAAAAAT+TGG | + | chr8_1:83617107-83617126 | None:intergenic | 35.0% | |
| CATCCATAATGTGTAGAGTA+AGG | + | chr8_1:83617129-83617148 | None:intergenic | 35.0% | |
| CTTACTCTACACATTATGGA+TGG | - | chr8_1:83617127-83617146 | Msa1220430:intron | 35.0% | |
| ! | AGAAGAGTAATGGAGAATCT+GGG | + | chr8_1:83617192-83617211 | None:intergenic | 35.0% |
| GGCAATCTCAATCTAATGTT+TGG | - | chr8_1:83617353-83617372 | Msa1220430:intron | 35.0% | |
| ACGGAATCTGTAGATCTTAT+CGG | + | chr8_1:83617559-83617578 | None:intergenic | 35.0% | |
| CAAATGTGATGAGAAGGATA+GGG | + | chr8_1:83617605-83617624 | None:intergenic | 35.0% | |
| ACAAATGTGATGAGAAGGAT+AGG | + | chr8_1:83617606-83617625 | None:intergenic | 35.0% | |
| ! | ATTAAGAAGTGCGTAATCTC+CGG | + | chr8_1:83617651-83617670 | None:intergenic | 35.0% |
| GAGATTACGCACTTCTTAAT+CGG | - | chr8_1:83617651-83617670 | Msa1220430:intron | 35.0% | |
| CTTTCGCCTGATAAAAAATC+TGG | - | chr8_1:83617677-83617696 | Msa1220430:intron | 35.0% | |
| ! | AGATCTTGAACTTTTCGAAC+AGG | - | chr8_1:83617787-83617806 | Msa1220430:intron | 35.0% |
| !! | GGAATCTTTGGTTTCACTTT+TGG | - | chr8_1:83618117-83618136 | Msa1220430:intron | 35.0% |
| ! | ATGAATTTATGTGGTGATGC+AGG | - | chr8_1:83618270-83618289 | Msa1220430:intron | 35.0% |
| TGTGAATGATGTTCTTTGCT+GGG | + | chr8_1:83618399-83618418 | None:intergenic | 35.0% | |
| TTGTGAATGATGTTCTTTGC+TGG | + | chr8_1:83618400-83618419 | None:intergenic | 35.0% | |
| !!! | CTCTTTAGGTGTTAGTTTTG+AGG | - | chr8_1:83618452-83618471 | Msa1220430:intron | 35.0% |
| CGTTCATGCACATGTAAAAT+GGG | + | chr8_1:83618753-83618772 | None:intergenic | 35.0% | |
| ACGTTCATGCACATGTAAAA+TGG | + | chr8_1:83618754-83618773 | None:intergenic | 35.0% | |
| ! | GATTTTCTATGAGATGGTAG+AGG | + | chr8_1:83618823-83618842 | None:intergenic | 35.0% |
| GTTCAAATGTAGACAGAAGA+GGG | + | chr8_1:83618849-83618868 | None:intergenic | 35.0% | |
| AGTTCAAATGTAGACAGAAG+AGG | + | chr8_1:83618850-83618869 | None:intergenic | 35.0% | |
| TCATGGTTATAGATAGGTCA+AGG | + | chr8_1:83619074-83619093 | None:intergenic | 35.0% | |
| CGGTAATCATGGTTATAGAT+AGG | + | chr8_1:83619080-83619099 | None:intergenic | 35.0% | |
| TATAACCATGATTACCGGTA+CGG | - | chr8_1:83619083-83619102 | Msa1220430:intron | 35.0% | |
| AACATCGTATATATCCGTAC+CGG | + | chr8_1:83619100-83619119 | None:intergenic | 35.0% | |
| TTCACACCAGATCAATGTTA+TGG | - | chr8_1:83619222-83619241 | Msa1220430:intron | 35.0% | |
| ! | TGGAATAAACCATTTTGTGG+CGG | - | chr8_1:83619242-83619261 | Msa1220430:intron | 35.0% |
| !!! | TCCTTGGTGCTCTTTTTATA+TGG | - | chr8_1:83619365-83619384 | Msa1220430:intron | 35.0% |
| !! | TCCATATAAAAAGAGCACCA+AGG | + | chr8_1:83619369-83619388 | None:intergenic | 35.0% |
| ! | TGAAAGGGAGAAAAGTGTAA+TGG | + | chr8_1:83619428-83619447 | None:intergenic | 35.0% |
| TGTGTTAGGAAGAGTTGAAA+GGG | + | chr8_1:83619443-83619462 | None:intergenic | 35.0% | |
| ! | TCTTCCTAACACACTTGTTA+TGG | - | chr8_1:83619450-83619469 | Msa1220430:intron | 35.0% |
| !! | CTTCCTAACACACTTGTTAT+GGG | - | chr8_1:83619451-83619470 | Msa1220430:intron | 35.0% |
| ATTCCCATAACAAGTGTGTT+AGG | + | chr8_1:83619457-83619476 | None:intergenic | 35.0% | |
| CCATACATAGCTCTTAAAAG+AGG | + | chr8_1:83619481-83619500 | None:intergenic | 35.0% | |
| !! | CCTCTTTTAAGAGCTATGTA+TGG | - | chr8_1:83619478-83619497 | Msa1220430:intron | 35.0% |
| TGATTTCTCAGGAAATCTCA+TGG | - | chr8_1:83619501-83619520 | Msa1220430:intron | 35.0% | |
| !! | TCTGATGTTGTTTCGCTTAA+CGG | - | chr8_1:83619658-83619677 | Msa1220430:intron | 35.0% |
| ATTTCAGCATCAGTTTGAAG+TGG | + | chr8_1:83619691-83619710 | None:intergenic | 35.0% | |
| CTTCAAACTGATGCTGAAAT+AGG | - | chr8_1:83619691-83619710 | Msa1220430:intron | 35.0% | |
| TTGAACAGAAATCTCAACAC+TGG | + | chr8_1:83619759-83619778 | None:intergenic | 35.0% | |
| !!! | AGGCTCTAGTTTTAACCAAA+GGG | - | chr8_1:83619802-83619821 | Msa1220430:intron | 35.0% |
| AAGATGAGACATTGACATTG+AGG | - | chr8_1:83619880-83619899 | Msa1220430:intron | 35.0% | |
| ATTGAGGATGCATAAGAAGA+GGG | - | chr8_1:83619896-83619915 | Msa1220430:intron | 35.0% | |
| AGTGGTGAGTTGTTCAATAA+TGG | - | chr8_1:83619933-83619952 | Msa1220430:intron | 35.0% | |
| CACAAAGAAGAAAGATAGCA+TGG | - | chr8_1:83620007-83620026 | Msa1220430:intron | 35.0% | |
| !! | TGGTAATGGACCTAATAACA+AGG | - | chr8_1:83620040-83620059 | Msa1220430:intron | 35.0% |
| AGGAGTTACACATGTTTGTT+TGG | - | chr8_1:83620060-83620079 | Msa1220430:intron | 35.0% | |
| TTAAGATTCCCTTCAGAAAC+AGG | + | chr8_1:83620101-83620120 | None:intergenic | 35.0% | |
| TCATGTGGAACATATTTGGA+AGG | + | chr8_1:83620170-83620189 | None:intergenic | 35.0% | |
| AGATCATGTACAAGATTGCA+AGG | + | chr8_1:83620331-83620350 | None:intergenic | 35.0% | |
| ATACATTGGGTGTATTGCTA+AGG | - | chr8_1:83620419-83620438 | Msa1220430:intron | 35.0% | |
| TACATTGGGTGTATTGCTAA+GGG | - | chr8_1:83620420-83620439 | Msa1220430:intron | 35.0% | |
| !! | CATCCAAATTTTGTTTGGGT+CGG | - | chr8_1:83620452-83620471 | Msa1220430:intron | 35.0% |
| ATTCCGACCCAAACAAAATT+TGG | + | chr8_1:83620458-83620477 | None:intergenic | 35.0% | |
| !! | AAATTTTGTTTGGGTCGGAA+TGG | - | chr8_1:83620457-83620476 | Msa1220430:intron | 35.0% |
| !! | AATTTTGTTTGGGTCGGAAT+GGG | - | chr8_1:83620458-83620477 | Msa1220430:intron | 35.0% |
| CAAAGAGTAATTTGGTCCTA+AGG | - | chr8_1:83620547-83620566 | Msa1220430:intron | 35.0% | |
| TAATGGTTCAGGAAATCCTT+AGG | + | chr8_1:83620566-83620585 | None:intergenic | 35.0% | |
| GATTAAGGAAGAAGTGGTTA+AGG | + | chr8_1:83620607-83620626 | None:intergenic | 35.0% | |
| TCGTATGATTAAGGAAGAAG+TGG | + | chr8_1:83620613-83620632 | None:intergenic | 35.0% | |
| ! | GAGACTTGTTCGTATGATTA+AGG | + | chr8_1:83620622-83620641 | None:intergenic | 35.0% |
| GGAATCATTAGAAATAGCGA+TGG | + | chr8_1:83620783-83620802 | None:intergenic | 35.0% | |
| !! | AAATGGGTTAAACCTGCTAT+AGG | + | chr8_1:83620864-83620883 | None:intergenic | 35.0% |
| TATAGCAGGTTTAACCCATT+TGG | - | chr8_1:83620863-83620882 | Msa1220430:intron | 35.0% | |
| TACAAAAACGCAAACCTGAA+TGG | + | chr8_1:83620951-83620970 | None:intergenic | 35.0% | |
| CGTTGGATAATATCTTCTTC+AGG | - | chr8_1:83620993-83621012 | Msa1220430:intron | 35.0% | |
| TGGGTATATTGCTGAAATTG+AGG | - | chr8_1:83621147-83621166 | Msa1220430:intron | 35.0% | |
| GGGTATATTGCTGAAATTGA+GGG | - | chr8_1:83621148-83621167 | Msa1220430:intron | 35.0% | |
| AAGTCTAGTAAAGTCTGGTT+TGG | + | chr8_1:83621185-83621204 | None:intergenic | 35.0% | |
| AAACCAGACTTTACTAGACT+TGG | - | chr8_1:83621184-83621203 | Msa1220430:intron | 35.0% | |
| AACCAGACTTTACTAGACTT+GGG | - | chr8_1:83621185-83621204 | Msa1220430:intron | 35.0% | |
| TGGGACAAGTCATAAATATG+TGG | - | chr8_1:83621204-83621223 | Msa1220430:intron | 35.0% | |
| GGGACAAGTCATAAATATGT+GGG | - | chr8_1:83621205-83621224 | Msa1220430:intron | 35.0% | |
| !!! | TTCAATTTTTGAGTGACACC+TGG | - | chr8_1:83621235-83621254 | Msa1220430:intron | 35.0% |
| !!! | TCAATTTTTGAGTGACACCT+GGG | - | chr8_1:83621236-83621255 | Msa1220430:intron | 35.0% |
| GGAGTGAATTGAGTAAAAGA+GGG | + | chr8_1:83621283-83621302 | None:intergenic | 35.0% | |
| AGGAGTGAATTGAGTAAAAG+AGG | + | chr8_1:83621284-83621303 | None:intergenic | 35.0% | |
| CTAGACATAAAATGCTTCTG+TGG | + | chr8_1:83621334-83621353 | None:intergenic | 35.0% | |
| !!! | CACAGAAGCATTTTATGTCT+AGG | - | chr8_1:83621332-83621351 | Msa1220430:intron | 35.0% |
| ACCAAATCTTCTTCCAGATT+GGG | - | chr8_1:83621369-83621388 | Msa1220430:intron | 35.0% | |
| GTTTAAACTCCTTATAGCTG+GGG | - | chr8_1:83621669-83621688 | Msa1220430:intron | 35.0% | |
| ! | GGAGTATTCAAAACTCCATA+TGG | + | chr8_1:83621766-83621785 | None:intergenic | 35.0% |
| GCTTGTAAAACATCTGAGTT+TGG | - | chr8_1:83621818-83621837 | Msa1220430:intron | 35.0% | |
| AACTCTTAGGGATTTCAACT+TGG | + | chr8_1:83621924-83621943 | None:intergenic | 35.0% | |
| GGTTAGGTTTCAAAACTCTT+AGG | + | chr8_1:83621937-83621956 | None:intergenic | 35.0% | |
| TTTGGAAAAAGCTTAAAGGG+TGG | + | chr8_1:83622177-83622196 | None:intergenic | 35.0% | |
| TAGGAATGCCTACTCAATTT+GGG | + | chr8_1:83622240-83622259 | None:intergenic | 35.0% | |
| TTAGGAATGCCTACTCAATT+TGG | + | chr8_1:83622241-83622260 | None:intergenic | 35.0% | |
| ! | GTAGGCATTCCTAAGTATTT+TGG | - | chr8_1:83622247-83622266 | Msa1220430:CDS | 35.0% |
| ATGTTCTCACTGATCTTAAC+AGG | - | chr8_1:83622271-83622290 | Msa1220430:CDS | 35.0% | |
| ! | TTTGTAGTCTTGGGAAATGT+TGG | - | chr8_1:83622315-83622334 | Msa1220430:CDS | 35.0% |
| ! | TTGTAGTCTTGGGAAATGTT+GGG | - | chr8_1:83622316-83622335 | Msa1220430:CDS | 35.0% |
| TGTCATCAGCATAGAGTAAA+TGG | - | chr8_1:83622458-83622477 | Msa1220430:CDS | 35.0% | |
| GTCATCAGCATAGAGTAAAT+GGG | - | chr8_1:83622459-83622478 | Msa1220430:CDS | 35.0% | |
| AGCATAGAGTAAATGGGAAA+TGG | - | chr8_1:83622465-83622484 | Msa1220430:CDS | 35.0% | |
| CAGAAGGATGGACATATTAA+GGG | + | chr8_1:83622517-83622536 | None:intergenic | 35.0% | |
| TCAGAAGGATGGACATATTA+AGG | + | chr8_1:83622518-83622537 | None:intergenic | 35.0% | |
| CCTATACATTATTTGTGCAG+AGG | + | chr8_1:83622566-83622585 | None:intergenic | 35.0% | |
| CCTCTGCACAAATAATGTAT+AGG | - | chr8_1:83622563-83622582 | Msa1220430:CDS | 35.0% | |
| TTTCATTGAGTCCACTCTTA+GGG | + | chr8_1:83622731-83622750 | None:intergenic | 35.0% | |
| ATTTCATTGAGTCCACTCTT+AGG | + | chr8_1:83622732-83622751 | None:intergenic | 35.0% | |
| !! | ATGACCATTGTTTTTCTTCC+TGG | - | chr8_1:83622801-83622820 | Msa1220430:CDS | 35.0% |
| !! | TGACCATTGTTTTTCTTCCT+GGG | - | chr8_1:83622802-83622821 | Msa1220430:CDS | 35.0% |
| AAACCCAGGAAGAAAAACAA+TGG | + | chr8_1:83622808-83622827 | None:intergenic | 35.0% | |
| TGAAGTCAGAGGGAAAATTT+GGG | - | chr8_1:83622998-83623017 | Msa1220430:intron | 35.0% | |
| GAATCAGGCAAATAAGAGTA+TGG | - | chr8_1:83623034-83623053 | Msa1220430:intron | 35.0% | |
| !!! | CTTTCACTTTTTCTCTCAAG+TGG | + | chr8_1:83623252-83623271 | None:intergenic | 35.0% |
| CACTTGAGAGAAAAAGTGAA+AGG | - | chr8_1:83623250-83623269 | Msa1220430:intron | 35.0% | |
| ! | TGTTTTACCCCCTGTAATAT+AGG | - | chr8_1:83623479-83623498 | Msa1220430:intron | 35.0% |
| CCGAAAATAGCCTATATTAC+AGG | + | chr8_1:83623492-83623511 | None:intergenic | 35.0% | |
| CAAAATCGAAGATATGGTAG+GGG | + | chr8_1:83623638-83623657 | None:intergenic | 35.0% | |
| GTGTTGGGAATTGAAAAAGT+TGG | + | chr8_1:83623869-83623888 | None:intergenic | 35.0% | |
| TTAAGAGAGAGAAGATGATG+TGG | + | chr8_1:83623893-83623912 | None:intergenic | 35.0% | |
| TTCAACTTTAACCTCTCCAA+TGG | - | chr8_1:83623924-83623943 | Msa1220430:intron | 35.0% | |
| TTTATTGGGATCCATTTCAC+TGG | - | chr8_1:83624118-83624137 | Msa1220430:intron | 35.0% | |
| ! | GAGACTTGGTTCATTTGATT+TGG | + | chr8_1:83624232-83624251 | None:intergenic | 35.0% |
| GAAGAATTCTGCAATATGGA+GGG | + | chr8_1:83624389-83624408 | None:intergenic | 35.0% | |
| AGAAGAATTCTGCAATATGG+AGG | + | chr8_1:83624390-83624409 | None:intergenic | 35.0% | |
| AACAACAAATTGCCTTGCAA+TGG | + | chr8_1:83624581-83624600 | None:intergenic | 35.0% | |
| ! | ACTCCTTTTACGTACGATTT+TGG | - | chr8_1:83624659-83624678 | Msa1220430:five_prime_UTR | 35.0% |
| ! | GTTAATTTTGTTCAGTCACG+AGG | - | chr8_1:83624721-83624740 | Msa1220430:five_prime_UTR | 35.0% |
| !!! | GGTTGTTTTTTCTTCAATCG+TGG | + | chr8_1:83624763-83624782 | None:intergenic | 35.0% |
| AAGAACGTTTGGCTGAATTT+GGG | - | chr8_1:83625032-83625051 | Msa1220430:five_prime_UTR | 35.0% | |
| CTACACATTATGGATGGAAG+TGG | - | chr8_1:83617133-83617152 | Msa1220430:intron | 40.0% | |
| ! | GAGAAGAGTAATGGAGAATC+TGG | + | chr8_1:83617193-83617212 | None:intergenic | 40.0% |
| !! | CATTTTGGTGAATTCGGAGT+CGG | + | chr8_1:83617505-83617524 | None:intergenic | 40.0% |
| ! | AGTTGGACGTTTGAGCATTT+TGG | + | chr8_1:83617520-83617539 | None:intergenic | 40.0% |
| GATAAGATCTACAGATTCCG+TGG | - | chr8_1:83617558-83617577 | Msa1220430:intron | 40.0% | |
| !! | AAACAACAAGAAGAGTGCCA+CGG | + | chr8_1:83617578-83617597 | None:intergenic | 40.0% |
| ACAGCACAAATGTGATGAGA+AGG | + | chr8_1:83617611-83617630 | None:intergenic | 40.0% | |
| TCGCCTGATAAAAAATCTGG+TGG | - | chr8_1:83617680-83617699 | Msa1220430:intron | 40.0% | |
| !!! | GAGCCACCAGATTTTTTATC+AGG | + | chr8_1:83617686-83617705 | None:intergenic | 40.0% |
| !! | GGTTTCACTTTTGGAGAAAG+CGG | - | chr8_1:83618126-83618145 | Msa1220430:intron | 40.0% |
| !!! | GGGTGTGTGGTTTTGTTTTT+TGG | - | chr8_1:83618197-83618216 | Msa1220430:intron | 40.0% |
| ACATCTCGTAAAAACGGCAA+CGG | + | chr8_1:83618572-83618591 | None:intergenic | 40.0% | |
| ! | GGGTTGGATTTTCTATGAGA+TGG | + | chr8_1:83618829-83618848 | None:intergenic | 40.0% |
| AAATGTAGACAGAAGAGGGT+TGG | + | chr8_1:83618845-83618864 | None:intergenic | 40.0% | |
| ! | TATATCCGTACCGGTAATCA+TGG | + | chr8_1:83619091-83619110 | None:intergenic | 40.0% |
| GCGATCATAGCAACATATAG+CGG | + | chr8_1:83619138-83619157 | None:intergenic | 40.0% | |
| ! | TAGCATACAGTTTAGTTCGC+TGG | - | chr8_1:83619190-83619209 | Msa1220430:intron | 40.0% |
| GTGAATCAGCTGCTAAGAAA+TGG | + | chr8_1:83619330-83619349 | None:intergenic | 40.0% | |
| TGGTCCAATCAAGACTATCT+TGG | + | chr8_1:83619408-83619427 | None:intergenic | 40.0% | |
| GTGTGTTAGGAAGAGTTGAA+AGG | + | chr8_1:83619444-83619463 | None:intergenic | 40.0% | |
| GCTATGTATGGTGATTTCTC+AGG | - | chr8_1:83619490-83619509 | Msa1220430:intron | 40.0% | |
| ! | GTTATGGAAGCTGCAGTTTT+AGG | + | chr8_1:83619622-83619641 | None:intergenic | 40.0% |
| GATGCTGAAATAGGTGAAGA+TGG | - | chr8_1:83619700-83619719 | Msa1220430:intron | 40.0% | |
| TGGTTAAAACTAGAGCCTCT+TGG | + | chr8_1:83619800-83619819 | None:intergenic | 40.0% | |
| !!! | GAGGCTCTAGTTTTAACCAA+AGG | - | chr8_1:83619801-83619820 | Msa1220430:intron | 40.0% |
| !!! | GGCTCTAGTTTTAACCAAAG+GGG | - | chr8_1:83619803-83619822 | Msa1220430:intron | 40.0% |
| ! | CCTTCGAAATTTGAAGTCCT+CGG | + | chr8_1:83619834-83619853 | None:intergenic | 40.0% |
| CGAGGACTTCAAATTTCGAA+GGG | - | chr8_1:83619832-83619851 | Msa1220430:intron | 40.0% | |
| GAGGACTTCAAATTTCGAAG+GGG | - | chr8_1:83619833-83619852 | Msa1220430:intron | 40.0% | |
| ! | TCTTCGCAATTTGAAGTCCT+CGG | + | chr8_1:83619864-83619883 | None:intergenic | 40.0% |
| CATTGAGGATGCATAAGAAG+AGG | - | chr8_1:83619895-83619914 | Msa1220430:intron | 40.0% | |
| TTGAGGATGCATAAGAAGAG+GGG | - | chr8_1:83619897-83619916 | Msa1220430:intron | 40.0% | |
| GGTGAGTTGTTCAATAATGG+TGG | - | chr8_1:83619936-83619955 | Msa1220430:intron | 40.0% | |
| AAAGCATAGGATTTGGAGGA+GGG | + | chr8_1:83619968-83619987 | None:intergenic | 40.0% | |
| ! | GAACCAGAAAGCATAGGATT+TGG | + | chr8_1:83619975-83619994 | None:intergenic | 40.0% |
| ! | CTTGTAGAACCAGAAAGCAT+AGG | + | chr8_1:83619981-83620000 | None:intergenic | 40.0% |
| AAGAAGAAAGATAGCATGGG+TGG | - | chr8_1:83620011-83620030 | Msa1220430:intron | 40.0% | |
| !!! | AGAGCTGCTTCTACTGATTT+TGG | - | chr8_1:83620134-83620153 | Msa1220430:intron | 40.0% |
| AAGATTGCAAGGACGTTTGT+AGG | + | chr8_1:83620320-83620339 | None:intergenic | 40.0% | |
| CGACCCAAACAAAATTTGGA+TGG | + | chr8_1:83620454-83620473 | None:intergenic | 40.0% | |
| TCCTAGATCTAGTAACGTTG+TGG | + | chr8_1:83620505-83620524 | None:intergenic | 40.0% | |
| ATGAGATTCACACTGGATTG+CGG | + | chr8_1:83620678-83620697 | None:intergenic | 40.0% | |
| !! | AAATAGCGATGGACTGGTTA+TGG | + | chr8_1:83620772-83620791 | None:intergenic | 40.0% |
| CATTAGAAATAGCGATGGAC+TGG | + | chr8_1:83620778-83620797 | None:intergenic | 40.0% | |
| ATCTTGACCAATCCTATAGC+AGG | - | chr8_1:83620849-83620868 | Msa1220430:intron | 40.0% | |
| GGTTAAACCTGCTATAGGAT+TGG | + | chr8_1:83620859-83620878 | None:intergenic | 40.0% | |
| GTATTCATTGACACAACTGG+TGG | - | chr8_1:83620968-83620987 | Msa1220430:intron | 40.0% | |
| CAGCAATAGCATACAACCTA+TGG | + | chr8_1:83621058-83621077 | None:intergenic | 40.0% | |
| TAAAGCCAGTCACAAAAGTC+TGG | - | chr8_1:83621122-83621141 | Msa1220430:intron | 40.0% | |
| AAAGCCAGTCACAAAAGTCT+GGG | - | chr8_1:83621123-83621142 | Msa1220430:intron | 40.0% | |
| GCTGAAATTGAGGGATAAGT+TGG | - | chr8_1:83621157-83621176 | Msa1220430:intron | 40.0% | |
| TTACTCAATTCACTCCTGAC+TGG | - | chr8_1:83621287-83621306 | Msa1220430:intron | 40.0% | |
| GACCAAATCTTCTTCCAGAT+TGG | - | chr8_1:83621368-83621387 | Msa1220430:intron | 40.0% | |
| ACCCAATCTGGAAGAAGATT+TGG | + | chr8_1:83621373-83621392 | None:intergenic | 40.0% | |
| GTAATGCTGAAAACCCAATC+TGG | + | chr8_1:83621385-83621404 | None:intergenic | 40.0% | |
| TTGACAGTGTAAAGACCAGT+AGG | - | chr8_1:83621464-83621483 | Msa1220430:intron | 40.0% | |
| TGACAGTGTAAAGACCAGTA+GGG | - | chr8_1:83621465-83621484 | Msa1220430:intron | 40.0% | |
| ! | TGCATCCACATTAAAGTGTC+TGG | - | chr8_1:83621491-83621510 | Msa1220430:intron | 40.0% |
| CCTTACCAGACACTTTAATG+TGG | + | chr8_1:83621499-83621518 | None:intergenic | 40.0% | |
| ! | CCACATTAAAGTGTCTGGTA+AGG | - | chr8_1:83621496-83621515 | Msa1220430:intron | 40.0% |
| ! | AAATGAGGCTAGCTGGAATA+TGG | + | chr8_1:83621591-83621610 | None:intergenic | 40.0% |
| TTGACTTAAATGAGGCTAGC+TGG | + | chr8_1:83621598-83621617 | None:intergenic | 40.0% | |
| TAGCCTCATTTAAGTCAACG+AGG | - | chr8_1:83621600-83621619 | Msa1220430:intron | 40.0% | |
| !! | AGACCTCGTTGACTTAAATG+AGG | + | chr8_1:83621606-83621625 | None:intergenic | 40.0% |
| TGGACATCTGGAAAGATAAC+TGG | + | chr8_1:83621697-83621716 | None:intergenic | 40.0% | |
| AATTGGAGATGGTAAGACAG+TGG | + | chr8_1:83621717-83621736 | None:intergenic | 40.0% | |
| ! | GATGTTTTACAAGCAACTGC+TGG | + | chr8_1:83621812-83621831 | None:intergenic | 40.0% |
| !! | ATGAAAGCGCCAAACTTGTT+TGG | - | chr8_1:83621889-83621908 | Msa1220430:intron | 40.0% |
| AAAAAGCTGTTTGCTCCTTC+TGG | + | chr8_1:83622036-83622055 | None:intergenic | 40.0% | |
| !! | AGTTGTTTTCTACTGCCCAA+AGG | + | chr8_1:83622076-83622095 | None:intergenic | 40.0% |
| TGTAGTAAGTAGGGATAGCT+TGG | - | chr8_1:83622098-83622117 | Msa1220430:CDS | 40.0% | |
| GTAGTAAGTAGGGATAGCTT+GGG | - | chr8_1:83622099-83622118 | Msa1220430:CDS | 40.0% | |
| !! | TGTTTGTCTTTTGAAGGCAG+AGG | + | chr8_1:83622145-83622164 | None:intergenic | 40.0% |
| GAAAAAGCTTAAAGGGTGGA+AGG | + | chr8_1:83622173-83622192 | None:intergenic | 40.0% | |
| TCTCACTGATCTTAACAGGA+AGG | - | chr8_1:83622275-83622294 | Msa1220430:CDS | 40.0% | |
| ! | TGTAGTCTTGGGAAATGTTG+GGG | - | chr8_1:83622317-83622336 | Msa1220430:CDS | 40.0% |
| CAATCTAGACAAGTCTGAGA+TGG | + | chr8_1:83622350-83622369 | None:intergenic | 40.0% | |
| TAGAGTAAATGGGAAATGGC+AGG | - | chr8_1:83622469-83622488 | Msa1220430:CDS | 40.0% | |
| AGAGTAAATGGGAAATGGCA+GGG | - | chr8_1:83622470-83622489 | Msa1220430:CDS | 40.0% | |
| ACTATCTGGCATGATTGACA+AGG | + | chr8_1:83622542-83622561 | None:intergenic | 40.0% | |
| !! | ATTTGTGCAGAGGTACTATC+TGG | + | chr8_1:83622556-83622575 | None:intergenic | 40.0% |
| ATGTATAGGTAAGGGGACAA+AGG | - | chr8_1:83622577-83622596 | Msa1220430:CDS | 40.0% | |
| TGTATAGGTAAGGGGACAAA+GGG | - | chr8_1:83622578-83622597 | Msa1220430:CDS | 40.0% | |
| ! | TTGTCTGAGATTAATCTGCC+AGG | - | chr8_1:83622865-83622884 | Msa1220430:intron | 40.0% |
| ! | CAAATTTTCCCTCTGACTTC+AGG | + | chr8_1:83622999-83623018 | None:intergenic | 40.0% |
| CTGAAGTCAGAGGGAAAATT+TGG | - | chr8_1:83622997-83623016 | Msa1220430:intron | 40.0% | |
| GAAGTCAGAGGGAAAATTTG+GGG | - | chr8_1:83622999-83623018 | Msa1220430:intron | 40.0% | |
| ! | GGGAGTTAATTTTCGGAATC+AGG | - | chr8_1:83623019-83623038 | Msa1220430:intron | 40.0% |
| !!! | TAAGCACCGACATTTTCTCT+AGG | - | chr8_1:83623298-83623317 | Msa1220430:intron | 40.0% |
| !!! | AAGCACCGACATTTTCTCTA+GGG | - | chr8_1:83623299-83623318 | Msa1220430:intron | 40.0% |
| ! | AGAAGATGATGTGGAGTGTT+GGG | + | chr8_1:83623884-83623903 | None:intergenic | 40.0% |
| !! | GGTTCATTTGATTTGGACAC+AGG | + | chr8_1:83624225-83624244 | None:intergenic | 40.0% |
| !! | GACACATGGTGCTACTTTAT+TGG | + | chr8_1:83624367-83624386 | None:intergenic | 40.0% |
| CAGAATTCTTCTTCTCTCTC+CGG | - | chr8_1:83624398-83624417 | Msa1220430:CDS | 40.0% | |
| CTCTCATCCATGTTGTTGAA+AGG | - | chr8_1:83624539-83624558 | Msa1220430:five_prime_UTR | 40.0% | |
| CCAATTGCCTTTCAACAACA+TGG | + | chr8_1:83624549-83624568 | None:intergenic | 40.0% | |
| CCATGTTGTTGAAAGGCAAT+TGG | - | chr8_1:83624546-83624565 | Msa1220430:five_prime_UTR | 40.0% | |
| CATCACACTCACATTTGCAA+TGG | + | chr8_1:83624628-83624647 | None:intergenic | 40.0% | |
| CACTTTATCGATGAGAGAAC+AGG | + | chr8_1:83624842-83624861 | None:intergenic | 40.0% | |
| CAAATTCAGCCAAACGTTCT+TGG | + | chr8_1:83625033-83625052 | None:intergenic | 40.0% | |
| CAAGAACGTTTGGCTGAATT+TGG | - | chr8_1:83625031-83625050 | Msa1220430:five_prime_UTR | 40.0% | |
| !! | TTTGGCTGAATTTGGGTTGT+TGG | - | chr8_1:83625039-83625058 | Msa1220430:five_prime_UTR | 40.0% |
| !! | TTTGGGTTGTTGGTTCTGTT+TGG | - | chr8_1:83625049-83625068 | Msa1220430:five_prime_UTR | 40.0% |
| ATAATGACGCAATCAACCCC+TGG | - | chr8_1:83617305-83617324 | Msa1220430:intron | 45.0% | |
| ! | CCTGAATGAAGGGTTCTAAC+CGG | - | chr8_1:83617332-83617351 | Msa1220430:intron | 45.0% |
| GTGCTTTATATGATGCCGTC+CGG | - | chr8_1:83617629-83617648 | Msa1220430:intron | 45.0% | |
| ! | CGTGTTTTGCAGCTTAAACC+TGG | - | chr8_1:83618058-83618077 | Msa1220430:intron | 45.0% |
| !! | TCACTTTTGGAGAAAGCGGA+AGG | - | chr8_1:83618130-83618149 | Msa1220430:intron | 45.0% |
| GTCTTTGATCGCAATTCCCA+TGG | + | chr8_1:83618163-83618182 | None:intergenic | 45.0% | |
| TCAAAGACACCAGTTCGAGT+TGG | - | chr8_1:83618175-83618194 | Msa1220430:intron | 45.0% | |
| ! | CAAAGACACCAGTTCGAGTT+GGG | - | chr8_1:83618176-83618195 | Msa1220430:intron | 45.0% |
| !! | AAAGACACCAGTTCGAGTTG+GGG | - | chr8_1:83618177-83618196 | Msa1220430:intron | 45.0% |
| AACTGCAGGTTTAAGGGCTT+TGG | - | chr8_1:83618294-83618313 | Msa1220430:intron | 45.0% | |
| !! | CAGGTTTAAGGGCTTTGGAA+GGG | - | chr8_1:83618299-83618318 | Msa1220430:intron | 45.0% |
| !! | AGGTTTAAGGGCTTTGGAAG+GGG | - | chr8_1:83618300-83618319 | Msa1220430:intron | 45.0% |
| GAAGGAAACATGGCTGAGAA+AGG | + | chr8_1:83618969-83618988 | None:intergenic | 45.0% | |
| ! | CATACAGTTTAGTTCGCTGG+TGG | - | chr8_1:83619193-83619212 | Msa1220430:intron | 45.0% |
| CTGCAAAAACCGCCACAAAA+TGG | + | chr8_1:83619254-83619273 | None:intergenic | 45.0% | |
| ! | CTGGTTAGATTTGAAGCTCG+TGG | + | chr8_1:83619740-83619759 | None:intergenic | 45.0% |
| TCAAGAGAACCAACTCCAAG+AGG | - | chr8_1:83619782-83619801 | Msa1220430:intron | 45.0% | |
| AAACTAGAGCCTCTTGGAGT+TGG | + | chr8_1:83619794-83619813 | None:intergenic | 45.0% | |
| CCGAGGACTTCAAATTTCGA+AGG | - | chr8_1:83619831-83619850 | Msa1220430:intron | 45.0% | |
| ! | GAAAGCATAGGATTTGGAGG+AGG | + | chr8_1:83619969-83619988 | None:intergenic | 45.0% |
| ! | CCAGAAAGCATAGGATTTGG+AGG | + | chr8_1:83619972-83619991 | None:intergenic | 45.0% |
| CCTCCAAATCCTATGCTTTC+TGG | - | chr8_1:83619969-83619988 | Msa1220430:intron | 45.0% | |
| !! | CTTTCTGGTTCTACAAGTGC+TGG | - | chr8_1:83619984-83620003 | Msa1220430:intron | 45.0% |
| AAGAAAGATAGCATGGGTGG+TGG | - | chr8_1:83620014-83620033 | Msa1220430:intron | 45.0% | |
| !! | AGTGCTTCACCTGTTTCTGA+AGG | - | chr8_1:83620089-83620108 | Msa1220430:intron | 45.0% |
| !! | GTGCTTCACCTGTTTCTGAA+GGG | - | chr8_1:83620090-83620109 | Msa1220430:intron | 45.0% |
| TAACGTTGTGGCACACCAAT+TGG | + | chr8_1:83620493-83620512 | None:intergenic | 45.0% | |
| GCCACAACGTTACTAGATCT+AGG | - | chr8_1:83620501-83620520 | Msa1220430:intron | 45.0% | |
| CTCCTTCAAACTCTACTGAC+CGG | - | chr8_1:83620649-83620668 | Msa1220430:intron | 45.0% | |
| TTCCGGTCAGTAGAGTTTGA+AGG | + | chr8_1:83620654-83620673 | None:intergenic | 45.0% | |
| GACGATGATGAGATTCACAC+TGG | + | chr8_1:83620685-83620704 | None:intergenic | 45.0% | |
| GAATCTCATCATCGTCAGCA+TGG | - | chr8_1:83620689-83620708 | Msa1220430:intron | 45.0% | |
| ! | TCCAAAGCGTTATCATTCCC+AGG | - | chr8_1:83620726-83620745 | Msa1220430:intron | 45.0% |
| ! | TCCTGGGAATGATAACGCTT+TGG | + | chr8_1:83620730-83620749 | None:intergenic | 45.0% |
| CCAGTACTTGGACATTTCCT+GGG | + | chr8_1:83620746-83620765 | None:intergenic | 45.0% | |
| CTTCAGGTCTATGGAGTATG+GGG | + | chr8_1:83620813-83620832 | None:intergenic | 45.0% | |
| CCTTCAGGTCTATGGAGTAT+GGG | + | chr8_1:83620814-83620833 | None:intergenic | 45.0% | |
| ACCTTCAGGTCTATGGAGTA+TGG | + | chr8_1:83620815-83620834 | None:intergenic | 45.0% | |
| AGCTCATCGTGTCTCCAAAT+GGG | + | chr8_1:83620880-83620899 | None:intergenic | 45.0% | |
| AGACACGATGAGCTGATTGA+GGG | - | chr8_1:83620886-83620905 | Msa1220430:intron | 45.0% | |
| CTCAACTCCTCAAGCTTTCT+CGG | + | chr8_1:83620928-83620947 | None:intergenic | 45.0% | |
| CAGTCACAAAAGTCTGGGTT+GGG | - | chr8_1:83621128-83621147 | Msa1220430:intron | 45.0% | |
| GTCCCAAGTCTAGTAAAGTC+TGG | + | chr8_1:83621190-83621209 | None:intergenic | 45.0% | |
| GCTACAGGGCTATCAAACAA+TGG | + | chr8_1:83621439-83621458 | None:intergenic | 45.0% | |
| GGTCTTTACACTGTCAAGAG+TGG | + | chr8_1:83621461-83621480 | None:intergenic | 45.0% | |
| TAACTGGATCCCCAGCTATA+AGG | + | chr8_1:83621681-83621700 | None:intergenic | 45.0% | |
| ATGGTAAGACAGTGGACATC+TGG | + | chr8_1:83621709-83621728 | None:intergenic | 45.0% | |
| TCATCAATAAAGGTGGGTGC+TGG | + | chr8_1:83621742-83621761 | None:intergenic | 45.0% | |
| !!! | GGAGTTTTGAATACTCCTCC+AGG | - | chr8_1:83621769-83621788 | Msa1220430:intron | 45.0% |
| CTATGCTGGCCAAACAAGTT+TGG | + | chr8_1:83621901-83621920 | None:intergenic | 45.0% | |
| GGATTTCAACTTGGCTATGC+TGG | + | chr8_1:83621915-83621934 | None:intergenic | 45.0% | |
| TCAAGTCCAAACACTCAGGA+GGG | + | chr8_1:83621958-83621977 | None:intergenic | 45.0% | |
| TTCAAGTCCAAACACTCAGG+AGG | + | chr8_1:83621959-83621978 | None:intergenic | 45.0% | |
| CTCTTCAAGTCCAAACACTC+AGG | + | chr8_1:83621962-83621981 | None:intergenic | 45.0% | |
| !! | AGGCAGAGGTGTTCTTATCA+GGG | + | chr8_1:83622131-83622150 | None:intergenic | 45.0% |
| !! | AAGGCAGAGGTGTTCTTATC+AGG | + | chr8_1:83622132-83622151 | None:intergenic | 45.0% |
| TTGGACCTCCCAAATTGAGT+AGG | - | chr8_1:83622229-83622248 | Msa1220430:CDS | 45.0% | |
| GAATGCCTACTCAATTTGGG+AGG | + | chr8_1:83622237-83622256 | None:intergenic | 45.0% | |
| AGAAGAAGGCAAGGTCATCA+TGG | + | chr8_1:83622413-83622432 | None:intergenic | 45.0% | |
| ATGATGACCTTGCCTTCTTC+TGG | - | chr8_1:83622412-83622431 | Msa1220430:intron | 45.0% | |
| GAGTAAATGGGAAATGGCAG+GGG | - | chr8_1:83622471-83622490 | Msa1220430:CDS | 45.0% | |
| ATTGACAAGGCTCAGAAGGA+TGG | + | chr8_1:83622529-83622548 | None:intergenic | 45.0% | |
| CATGATTGACAAGGCTCAGA+AGG | + | chr8_1:83622533-83622552 | None:intergenic | 45.0% | |
| TTTCTCCAAATAGAGGCCTC+AGG | + | chr8_1:83622612-83622631 | None:intergenic | 45.0% | |
| AAAACCCATAGCCCTAAGAG+TGG | - | chr8_1:83622717-83622736 | Msa1220430:CDS | 45.0% | |
| CTGAGATTAATCTGCCAGGA+AGG | - | chr8_1:83622869-83622888 | Msa1220430:intron | 45.0% | |
| ! | TTCCAAAGTGCTTTCCTTCC+TGG | + | chr8_1:83622886-83622905 | None:intergenic | 45.0% |
| ! | ACTTATTGGCCTGAAGTCAG+AGG | - | chr8_1:83622987-83623006 | Msa1220430:intron | 45.0% |
| ! | CTTATTGGCCTGAAGTCAGA+GGG | - | chr8_1:83622988-83623007 | Msa1220430:intron | 45.0% |
| GAGCTCCCTAGAGAAAATGT+CGG | + | chr8_1:83623307-83623326 | None:intergenic | 45.0% | |
| GAGAAGATGATGTGGAGTGT+TGG | + | chr8_1:83623885-83623904 | None:intergenic | 45.0% | |
| !! | GTGCTACTTTATTGGTTGCC+TGG | + | chr8_1:83624359-83624378 | None:intergenic | 45.0% |
| TTGTAGAACACGCGGAAACA+GGG | + | chr8_1:83624441-83624460 | None:intergenic | 45.0% | |
| GTGTTCTACAAGCGCCAAAA+AGG | - | chr8_1:83624450-83624469 | Msa1220430:CDS | 45.0% | |
| TGGTTCAACAGACCATTGCA+AGG | - | chr8_1:83624566-83624585 | Msa1220430:five_prime_UTR | 45.0% | |
| !! | ATAAAGTTTATAATAAAAAA+TGG | + | chr8_1:83618874-83618893 | None:intergenic | 5.0% |
| !!! | ATTTTTATCATTAAAATAAA+TGG | - | chr8_1:83623337-83623356 | Msa1220430:intron | 5.0% |
| CCGGTTAGAACCCTTCATTC+AGG | + | chr8_1:83617335-83617354 | None:intergenic | 50.0% | |
| !! | AGGAGAAGTGGATTGAACGG+CGG | + | chr8_1:83617482-83617501 | None:intergenic | 50.0% |
| !! | CGGAGGAGAAGTGGATTGAA+CGG | + | chr8_1:83617485-83617504 | None:intergenic | 50.0% |
| TTTGGTGAATTCGGAGTCGG+AGG | + | chr8_1:83617502-83617521 | None:intergenic | 50.0% | |
| ! | AGAAGTGCGTAATCTCCGGA+CGG | + | chr8_1:83617647-83617666 | None:intergenic | 50.0% |
| TGAGCATACGCACTCAAACC+AGG | + | chr8_1:83618079-83618098 | None:intergenic | 50.0% | |
| ! | AAAGATTCCGCTGCTTGCTG+CGG | + | chr8_1:83618106-83618125 | None:intergenic | 50.0% |
| !! | AAGCGGAAGGTGTTGTTCCA+TGG | - | chr8_1:83618143-83618162 | Msa1220430:intron | 50.0% |
| !! | AGCGGAAGGTGTTGTTCCAT+GGG | - | chr8_1:83618144-83618163 | Msa1220430:intron | 50.0% |
| TGCAGGCAACTGCAGGTTTA+AGG | - | chr8_1:83618287-83618306 | Msa1220430:intron | 50.0% | |
| GCAGGCAACTGCAGGTTTAA+GGG | - | chr8_1:83618288-83618307 | Msa1220430:intron | 50.0% | |
| !! | GCAGGTTTAAGGGCTTTGGA+AGG | - | chr8_1:83618298-83618317 | Msa1220430:intron | 50.0% |
| GGGCAGTATTCAGTGATCTG+CGG | + | chr8_1:83618733-83618752 | None:intergenic | 50.0% | |
| AGGATGCATAAGAAGAGGGG+AGG | - | chr8_1:83619900-83619919 | Msa1220430:intron | 50.0% | |
| GGATGCATAAGAAGAGGGGA+GGG | - | chr8_1:83619901-83619920 | Msa1220430:intron | 50.0% | |
| !! | ATGGGTGGTGGAAGTGGTAA+TGG | - | chr8_1:83620026-83620045 | Msa1220430:intron | 50.0% |
| !! | AATGGGCTAGTTGGGCCAAT+TGG | - | chr8_1:83620475-83620494 | Msa1220430:intron | 50.0% |
| TCACACTGGATTGCGGTTTC+CGG | + | chr8_1:83620671-83620690 | None:intergenic | 50.0% | |
| CCCAGGAAATGTCCAAGTAC+TGG | - | chr8_1:83620743-83620762 | Msa1220430:intron | 50.0% | |
| GCCAGTACTTGGACATTTCC+TGG | + | chr8_1:83620747-83620766 | None:intergenic | 50.0% | |
| TGGTTATGGCTGCCAGTACT+TGG | + | chr8_1:83620758-83620777 | None:intergenic | 50.0% | |
| GTCTATGGAGTATGGGGTCT+GGG | + | chr8_1:83620807-83620826 | None:intergenic | 50.0% | |
| CCCATACTCCATAGACCTGA+AGG | - | chr8_1:83620811-83620830 | Msa1220430:intron | 50.0% | |
| GATGCGAACCTTCAGGTCTA+TGG | + | chr8_1:83620822-83620841 | None:intergenic | 50.0% | |
| CAACTCTGATGCGAACCTTC+AGG | + | chr8_1:83620829-83620848 | None:intergenic | 50.0% | |
| CAGCTCATCGTGTCTCCAAA+TGG | + | chr8_1:83620881-83620900 | None:intergenic | 50.0% | |
| GAGACACGATGAGCTGATTG+AGG | - | chr8_1:83620885-83620904 | Msa1220430:intron | 50.0% | |
| GACACGATGAGCTGATTGAG+GGG | - | chr8_1:83620887-83620906 | Msa1220430:intron | 50.0% | |
| ! | TGAGCTGATTGAGGGGTATG+CGG | - | chr8_1:83620894-83620913 | Msa1220430:intron | 50.0% |
| CTTGAGGAGTTGAGCCATTC+AGG | - | chr8_1:83620934-83620953 | Msa1220430:intron | 50.0% | |
| TCAGATTACGCGCATGCCAT+AGG | - | chr8_1:83621039-83621058 | Msa1220430:intron | 50.0% | |
| ! | CCAACCCAGACTTTTGTGAC+TGG | + | chr8_1:83621130-83621149 | None:intergenic | 50.0% |
| CCAGTCACAAAAGTCTGGGT+TGG | - | chr8_1:83621127-83621146 | Msa1220430:intron | 50.0% | |
| TTGAGTGACACCTGGGACAT+AGG | - | chr8_1:83621243-83621262 | Msa1220430:intron | 50.0% | |
| ACTGCTACAACCTATGTCCC+AGG | + | chr8_1:83621256-83621275 | None:intergenic | 50.0% | |
| TCCTGACTGGCAAAGAGTTG+TGG | - | chr8_1:83621300-83621319 | Msa1220430:intron | 50.0% | |
| TCCACAACTCTTTGCCAGTC+AGG | + | chr8_1:83621304-83621323 | None:intergenic | 50.0% | |
| CAGGGCTATCAAACAATGGC+AGG | + | chr8_1:83621435-83621454 | None:intergenic | 50.0% | |
| CACTGTCAAGAGTGGCTACA+GGG | + | chr8_1:83621453-83621472 | None:intergenic | 50.0% | |
| ACACTGTCAAGAGTGGCTAC+AGG | + | chr8_1:83621454-83621473 | None:intergenic | 50.0% | |
| ATGTGGATGCATGACCCTAC+TGG | + | chr8_1:83621482-83621501 | None:intergenic | 50.0% | |
| TGGAATATGGCGTGTCTGGA+AGG | + | chr8_1:83621578-83621597 | None:intergenic | 50.0% | |
| TAGCTGGAATATGGCGTGTC+TGG | + | chr8_1:83621582-83621601 | None:intergenic | 50.0% | |
| !! | ACCTTGGTTTTCTGGCCTCT+TGG | - | chr8_1:83621640-83621659 | Msa1220430:intron | 50.0% |
| TCCAAGAGGCCAGAAAACCA+AGG | + | chr8_1:83621644-83621663 | None:intergenic | 50.0% | |
| !! | AAAGGTGGGTGCTGGAGAAT+TGG | + | chr8_1:83621734-83621753 | None:intergenic | 50.0% |
| ATACTCCTCCAGGCATAGCT+AGG | - | chr8_1:83621779-83621798 | Msa1220430:intron | 50.0% | |
| TACTCCTCCAGGCATAGCTA+GGG | - | chr8_1:83621780-83621799 | Msa1220430:intron | 50.0% | |
| ACCTAACCCTCCTGAGTGTT+TGG | - | chr8_1:83621949-83621968 | Msa1220430:intron | 50.0% | |
| TCCAAACACTCAGGAGGGTT+AGG | + | chr8_1:83621953-83621972 | None:intergenic | 50.0% | |
| AGCTGTTTGCTCCTTCTGGT+GGG | + | chr8_1:83622032-83622051 | None:intergenic | 50.0% | |
| AAGCTGTTTGCTCCTTCTGG+TGG | + | chr8_1:83622033-83622052 | None:intergenic | 50.0% | |
| AGGTGTTCTTATCAGGGCAG+TGG | + | chr8_1:83622125-83622144 | None:intergenic | 50.0% | |
| ATTTGGGAGGTCCAAAGAGC+AGG | + | chr8_1:83622224-83622243 | None:intergenic | 50.0% | |
| ! | GACCTTGCCTTCTTCTGGTT+TGG | - | chr8_1:83622417-83622436 | Msa1220430:intron | 50.0% |
| TGTAGGGCCAAACCAGAAGA+AGG | + | chr8_1:83622427-83622446 | None:intergenic | 50.0% | |
| AAATAGAGGCCTCAGGCAAG+GGG | + | chr8_1:83622605-83622624 | None:intergenic | 50.0% | |
| CAAATAGAGGCCTCAGGCAA+GGG | + | chr8_1:83622606-83622625 | None:intergenic | 50.0% | |
| GAGTCCACTCTTAGGGCTAT+GGG | + | chr8_1:83622724-83622743 | None:intergenic | 50.0% | |
| TGAGTCCACTCTTAGGGCTA+TGG | + | chr8_1:83622725-83622744 | None:intergenic | 50.0% | |
| !! | TGCCAGGAAGGAAAGCACTT+TGG | - | chr8_1:83622881-83622900 | Msa1220430:intron | 50.0% |
| !! | AATAGGTGGTGGGGTAGAGT+AGG | + | chr8_1:83623979-83623998 | None:intergenic | 50.0% |
| CTGCAATATGGAGGGACACA+TGG | + | chr8_1:83624381-83624400 | None:intergenic | 50.0% | |
| CTTGTAGAACACGCGGAAAC+AGG | + | chr8_1:83624442-83624461 | None:intergenic | 50.0% | |
| TTTGGCGCTTGTAGAACACG+CGG | + | chr8_1:83624449-83624468 | None:intergenic | 50.0% | |
| ACCAATTAAAACGCGACGCG+TGG | - | chr8_1:83624474-83624493 | Msa1220430:CDS | 50.0% | |
| GTCTGCATGCCAAGAACGTT+TGG | - | chr8_1:83625021-83625040 | Msa1220430:five_prime_UTR | 50.0% | |
| CCTTCATTCAGGCACACCAG+GGG | + | chr8_1:83617324-83617343 | None:intergenic | 55.0% | |
| CCCTTCATTCAGGCACACCA+GGG | + | chr8_1:83617325-83617344 | None:intergenic | 55.0% | |
| CCCTGGTGTGCCTGAATGAA+GGG | - | chr8_1:83617322-83617341 | Msa1220430:intron | 55.0% | |
| ACCCTTCATTCAGGCACACC+AGG | + | chr8_1:83617326-83617345 | None:intergenic | 55.0% | |
| !! | ATCGGTAACGGATCTGACCG+TGG | + | chr8_1:83617438-83617457 | None:intergenic | 55.0% |
| CGGAGGAAGGTGATCGGTAA+CGG | + | chr8_1:83617450-83617469 | None:intergenic | 55.0% | |
| GTTCGACGGAGGAAGGTGAT+CGG | + | chr8_1:83617456-83617475 | None:intergenic | 55.0% | |
| TTGAACGGCGGAGAGTTCGA+CGG | + | chr8_1:83617470-83617489 | None:intergenic | 55.0% | |
| ATTCGGAGTCGGAGGAGAAG+TGG | + | chr8_1:83617494-83617513 | None:intergenic | 55.0% | |
| GCTCAAACGTCCAACTCGTC+AGG | - | chr8_1:83617524-83617543 | Msa1220430:intron | 55.0% | |
| GAGAGTGACTCCTGACGAGT+TGG | + | chr8_1:83617537-83617556 | None:intergenic | 55.0% | |
| TCAGAAACCGCAGCAAGCAG+CGG | - | chr8_1:83618096-83618115 | Msa1220430:intron | 55.0% | |
| GCAGCAAGCAGCGGAATCTT+TGG | - | chr8_1:83618105-83618124 | Msa1220430:intron | 55.0% | |
| TAACCAAAGGGGCTACTCCG+AGG | - | chr8_1:83619814-83619833 | Msa1220430:intron | 55.0% | |
| ATTTCGAAGGGGCTACTCCG+AGG | - | chr8_1:83619844-83619863 | Msa1220430:intron | 55.0% | |
| TGCATAAGAAGAGGGGAGGG+AGG | - | chr8_1:83619904-83619923 | Msa1220430:intron | 55.0% | |
| !! | GATAGCATGGGTGGTGGAAG+TGG | - | chr8_1:83620020-83620039 | Msa1220430:intron | 55.0% |
| !! | TTGGGTCGGAATGGGCTAGT+TGG | - | chr8_1:83620466-83620485 | Msa1220430:intron | 55.0% |
| !! | TGGGTCGGAATGGGCTAGTT+GGG | - | chr8_1:83620467-83620486 | Msa1220430:intron | 55.0% |
| TATGGAGTATGGGGTCTGGG+TGG | + | chr8_1:83620804-83620823 | None:intergenic | 55.0% | |
| GGTCTATGGAGTATGGGGTC+TGG | + | chr8_1:83620808-83620827 | None:intergenic | 55.0% | |
| ! | GAGCTGATTGAGGGGTATGC+GGG | - | chr8_1:83620895-83620914 | Msa1220430:intron | 55.0% |
| CGCAGATCCGAGAAAGCTTG+AGG | - | chr8_1:83620918-83620937 | Msa1220430:intron | 55.0% | |
| TGACACAACTGGTGGCTCGT+TGG | - | chr8_1:83620976-83620995 | Msa1220430:intron | 55.0% | |
| !! | GGGTGCTGGAGAATTGGAGA+TGG | + | chr8_1:83621728-83621747 | None:intergenic | 55.0% |
| ATAGCCCTAGCTATGCCTGG+AGG | + | chr8_1:83621787-83621806 | None:intergenic | 55.0% | |
| GCAATAGCCCTAGCTATGCC+TGG | + | chr8_1:83621790-83621809 | None:intergenic | 55.0% | |
| GCTGTTTGCTCCTTCTGGTG+GGG | + | chr8_1:83622031-83622050 | None:intergenic | 55.0% | |
| GGCCAAACCAGAAGAAGGCA+AGG | + | chr8_1:83622422-83622441 | None:intergenic | 55.0% | |
| CCAAATAGAGGCCTCAGGCA+AGG | + | chr8_1:83622607-83622626 | None:intergenic | 55.0% | |
| CCTTGCCTGAGGCCTCTATT+TGG | - | chr8_1:83622604-83622623 | Msa1220430:CDS | 55.0% | |
| GGAGCGTGAAAAGCAGATGC+CGG | + | chr8_1:83624420-83624439 | None:intergenic | 55.0% | |
| !! | GCCACGCGTCGCGTTTTAAT+TGG | + | chr8_1:83624478-83624497 | None:intergenic | 55.0% |
| CCCCTGGTGTGCCTGAATGA+AGG | - | chr8_1:83617321-83617340 | Msa1220430:intron | 60.0% | |
| CCACCTGCCACCACATCCAA+CGG | - | chr8_1:83617412-83617431 | Msa1220430:intron | 60.0% | |
| CCACACACCCCAACTCGAAC+TGG | + | chr8_1:83618187-83618206 | None:intergenic | 60.0% | |
| !! | CCAGTTCGAGTTGGGGTGTG+TGG | - | chr8_1:83618184-83618203 | Msa1220430:intron | 60.0% |
| ! | GTGGTGATGCAGGCAACTGC+AGG | - | chr8_1:83618280-83618299 | Msa1220430:intron | 60.0% |
| AGTCCTCGGAGTAGCCCCTT+TGG | + | chr8_1:83619820-83619839 | None:intergenic | 60.0% | |
| ! | AGGGGAGGGAGGAGTATGAG+TGG | - | chr8_1:83619915-83619934 | Msa1220430:intron | 60.0% |
| CCTTCTGGTGGGGCTCTACA+GGG | + | chr8_1:83622021-83622040 | None:intergenic | 60.0% | |
| TCCTTCTGGTGGGGCTCTAC+AGG | + | chr8_1:83622022-83622041 | None:intergenic | 60.0% | |
| ACAAAGGGTCCCCTTGCCTG+AGG | - | chr8_1:83622593-83622612 | Msa1220430:CDS | 60.0% | |
| GTGGGGTAGAGTAGGTGGTG+GGG | + | chr8_1:83623971-83623990 | None:intergenic | 60.0% | |
| GGTGGGGTAGAGTAGGTGGT+GGG | + | chr8_1:83623972-83623991 | None:intergenic | 60.0% | |
| TGGTGGGGTAGAGTAGGTGG+TGG | + | chr8_1:83623973-83623992 | None:intergenic | 60.0% | |
| !! | AGGTGGTGGGGTAGAGTAGG+TGG | + | chr8_1:83623976-83623995 | None:intergenic | 60.0% |
| CCGTTGGATGTGGTGGCAGG+TGG | + | chr8_1:83617415-83617434 | None:intergenic | 65.0% | |
| TGGCCGTTGGATGTGGTGGC+AGG | + | chr8_1:83617418-83617437 | None:intergenic | 65.0% | |
| GCCACCACATCCAACGGCCA+CGG | - | chr8_1:83617418-83617437 | Msa1220430:intron | 65.0% | |
| ACCGTGGCCGTTGGATGTGG+TGG | + | chr8_1:83617422-83617441 | None:intergenic | 65.0% | |
| CTGACCGTGGCCGTTGGATG+TGG | + | chr8_1:83617425-83617444 | None:intergenic | 65.0% | |
| ACGGATCTGACCGTGGCCGT+TGG | + | chr8_1:83617431-83617450 | None:intergenic | 65.0% | |
| GCGGAGAGTTCGACGGAGGA+AGG | + | chr8_1:83617463-83617482 | None:intergenic | 65.0% | |
| AACGGCGGAGAGTTCGACGG+AGG | + | chr8_1:83617467-83617486 | None:intergenic | 65.0% | |
| CCCTGTAGAGCCCCACCAGA+AGG | - | chr8_1:83622018-83622037 | Msa1220430:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 83617059 | 83625084 | 83617059 | ID=Msa1220430;Name=Msa1220430 |
| chr8_1 | mRNA | 83617059 | 83625084 | 83617059 | ID=Msa1220430-mRNA-1;Parent=Msa1220430;Name=Msa1220430-mRNA-1;_AED=0.33;_eAED=0.35;_QI=579|0.4|0.5|0.83|1|1|6|0|402 |
| chr8_1 | exon | 83617059 | 83617121 | 83617059 | ID=Msa1220430-mRNA-1:exon:30007;Parent=Msa1220430-mRNA-1 |
| chr8_1 | exon | 83622016 | 83622356 | 83622016 | ID=Msa1220430-mRNA-1:exon:30006;Parent=Msa1220430-mRNA-1 |
| chr8_1 | exon | 83622422 | 83622869 | 83622422 | ID=Msa1220430-mRNA-1:exon:30005;Parent=Msa1220430-mRNA-1 |
| chr8_1 | exon | 83623795 | 83623851 | 83623795 | ID=Msa1220430-mRNA-1:exon:30004;Parent=Msa1220430-mRNA-1 |
| chr8_1 | exon | 83623945 | 83624073 | 83623945 | ID=Msa1220430-mRNA-1:exon:30003;Parent=Msa1220430-mRNA-1 |
| chr8_1 | exon | 83624335 | 83625084 | 83624335 | ID=Msa1220430-mRNA-1:exon:30002;Parent=Msa1220430-mRNA-1 |
| chr8_1 | five_prime_UTR | 83624506 | 83625084 | 83624506 | ID=Msa1220430-mRNA-1:five_prime_utr;Parent=Msa1220430-mRNA-1 |
| chr8_1 | CDS | 83624335 | 83624505 | 83624335 | ID=Msa1220430-mRNA-1:cds;Parent=Msa1220430-mRNA-1 |
| chr8_1 | CDS | 83623945 | 83624073 | 83623945 | ID=Msa1220430-mRNA-1:cds;Parent=Msa1220430-mRNA-1 |
| chr8_1 | CDS | 83623795 | 83623851 | 83623795 | ID=Msa1220430-mRNA-1:cds;Parent=Msa1220430-mRNA-1 |
| chr8_1 | CDS | 83622422 | 83622869 | 83622422 | ID=Msa1220430-mRNA-1:cds;Parent=Msa1220430-mRNA-1 |
| chr8_1 | CDS | 83622016 | 83622356 | 83622016 | ID=Msa1220430-mRNA-1:cds;Parent=Msa1220430-mRNA-1 |
| chr8_1 | CDS | 83617059 | 83617121 | 83617059 | ID=Msa1220430-mRNA-1:cds;Parent=Msa1220430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
