AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1222830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1222830 MtrunA17_Chr4g0074161 97.317 410 4 2 1 403 1 410 0.0 808
Msa1222830 MtrunA17_Chr1g0190731 62.366 186 60 4 184 367 176 353 5.67e-62 203
Msa1222830 MtrunA17_Chr1g0184841 65.854 164 46 3 187 349 108 262 1.61e-54 182
Msa1222830 MtrunA17_Chr3g0131771 60.000 85 29 2 199 282 147 227 3.01e-23 99.4
Msa1222830 MtrunA17_Chr7g0234761 54.054 111 42 4 199 306 317 421 7.10e-23 100
Msa1222830 MtrunA17_Chr8g0339091 56.522 92 36 2 176 263 265 356 1.00e-22 100
Msa1222830 MtrunA17_Chr3g0144641 72.727 66 17 1 199 263 191 256 1.33e-22 98.6
Msa1222830 MtrunA17_Chr1g0152131 60.241 83 32 1 182 263 243 325 1.76e-22 98.6
Msa1222830 MtrunA17_Chr4g0035101 71.212 66 18 1 199 263 143 208 8.53e-22 95.5
Msa1222830 MtrunA17_Chr8g0365941 64.935 77 26 1 188 263 294 370 8.67e-22 97.1
Msa1222830 MtrunA17_Chr8g0385911 57.831 83 30 2 199 280 145 223 2.18e-21 94.0
Msa1222830 MtrunA17_Chr5g0421111 65.753 73 24 1 192 263 358 430 2.50e-21 95.9
Msa1222830 MtrunA17_Chr8g0363921 68.182 66 20 1 199 263 151 216 2.79e-21 92.8
Msa1222830 MtrunA17_Chr5g0415291 66.667 66 21 1 199 263 112 177 2.29e-20 89.4
Msa1222830 MtrunA17_Chr1g0152651 52.564 78 37 0 185 262 260 337 3.05e-19 88.6
Msa1222830 MtrunA17_Chr1g0153241 39.416 137 72 4 167 297 55 186 3.51e-19 86.7
Msa1222830 MtrunA17_Chr1g0193321 55.405 74 29 1 201 274 464 533 3.89e-19 89.7
Msa1222830 MtrunA17_Chr5g0393721 60.000 65 26 0 198 262 223 287 4.87e-19 87.4
Msa1222830 MtrunA17_Chr4g0014771 62.121 66 24 1 198 262 117 182 5.98e-19 84.3
Msa1222830 MtrunA17_Chr1g0182791 54.430 79 32 1 194 272 312 386 9.46e-19 88.2
Msa1222830 MtrunA17_Chr3g0134741 52.632 76 36 0 198 273 228 303 1.00e-18 86.3
Msa1222830 MtrunA17_Chr1g0174271 60.870 69 26 1 198 265 297 365 1.32e-18 86.7
Msa1222830 MtrunA17_Chr1g0174161 49.485 97 39 3 195 285 156 248 2.68e-18 85.1
Msa1222830 MtrunA17_Chr7g0258161 61.429 70 26 1 195 263 169 238 1.01e-17 83.6
Msa1222830 MtrunA17_Chr7g0262691 52.857 70 33 0 202 271 255 324 1.21e-17 84.7
Msa1222830 MtrunA17_Chr1g0207301 43.750 96 50 1 167 262 260 351 1.38e-17 84.0
Msa1222830 MtrunA17_Chr3g0095391 57.143 63 27 0 201 263 311 373 1.85e-17 84.0
Msa1222830 MtrunA17_Chr6g0484271 62.121 66 24 1 199 263 155 220 1.92e-17 82.0
Msa1222830 MtrunA17_Chr5g0435021 47.674 86 40 2 178 262 200 281 3.74e-17 81.6
Msa1222830 MtrunA17_Chr1g0207311 41.667 96 56 0 178 273 175 270 6.05e-17 80.5
Msa1222830 MtrunA17_Chr5g0402031 64.815 54 19 0 210 263 116 169 1.29e-16 80.5
Msa1222830 MtrunA17_Chr4g0032951 56.522 69 29 1 198 265 354 422 2.06e-16 80.5
Msa1222830 MtrunA17_Chr7g0271251 52.632 76 33 1 201 276 434 506 2.24e-16 81.3
Msa1222830 MtrunA17_Chr8g0351881 53.623 69 31 1 198 265 315 383 2.35e-16 80.1
Msa1222830 MtrunA17_Chr7g0258181 54.412 68 30 1 199 265 243 310 3.55e-16 79.0
Msa1222830 MtrunA17_Chr2g0329041 57.812 64 26 1 198 260 331 394 4.20e-16 79.7
Msa1222830 MtrunA17_Chr8g0384141 50.667 75 37 0 187 261 102 176 7.10e-16 77.0
Msa1222830 MtrunA17_Chr7g0270871 55.357 56 25 0 210 265 213 268 1.44e-15 77.8
Msa1222830 MtrunA17_Chr3g0087771 54.545 66 29 1 198 262 321 386 2.31e-15 77.4
Msa1222830 MtrunA17_Chr7g0231461 53.030 66 31 0 196 261 294 359 2.98e-15 77.4
Msa1222830 MtrunA17_Chr3g0134001 54.545 66 29 1 206 271 178 242 6.22e-15 74.7
Msa1222830 MtrunA17_Chr1g0213791 53.846 65 29 1 198 261 264 328 1.05e-13 71.6
Msa1222830 MtrunA17_Chr1g0185741 47.222 72 38 0 205 276 190 261 1.22e-13 71.2
Msa1222830 MtrunA17_Chr7g0243041 52.830 53 25 0 206 258 33 85 1.61e-12 65.1
Msa1222830 MtrunA17_Chr8g0390301 29.710 138 83 4 215 351 196 320 4.53e-12 66.6
Msa1222830 MtrunA17_Chr4g0054571 44.444 90 48 2 207 294 148 237 3.60e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1222830 AT2G24260.1 62.195 246 63 5 145 374 75 306 2.12e-90 277
Msa1222830 AT2G24260.2 72.973 185 41 2 191 374 27 203 4.58e-89 270
Msa1222830 AT4G30980.1 59.690 258 69 9 149 402 83 309 5.88e-82 254
Msa1222830 AT4G30980.2 61.240 258 65 10 149 402 131 357 2.28e-81 254
Msa1222830 AT5G58010.1 57.143 245 79 5 148 378 46 278 2.50e-79 246
Msa1222830 AT4G02590.3 62.366 186 59 5 185 366 66 244 1.67e-56 186
Msa1222830 AT4G02590.2 62.366 186 59 5 185 366 129 307 4.91e-56 187
Msa1222830 AT4G02590.1 62.366 186 59 5 185 366 129 307 4.91e-56 187
Msa1222830 AT1G03040.2 65.806 155 38 3 196 349 136 276 8.41e-51 173
Msa1222830 AT1G03040.1 65.806 155 38 2 196 349 141 281 1.19e-50 172
Msa1222830 AT1G03040.3 59.302 172 52 2 196 349 141 312 9.53e-48 166
Msa1222830 AT5G50915.3 58.824 85 30 2 199 282 136 216 8.20e-24 100
Msa1222830 AT5G50915.4 58.824 85 30 2 199 282 136 216 8.20e-24 100
Msa1222830 AT5G50915.1 58.824 85 30 2 199 282 136 216 9.59e-24 100
Msa1222830 AT5G50915.2 58.824 85 30 2 199 282 136 216 9.59e-24 100
Msa1222830 AT4G34530.1 71.212 66 18 1 199 263 172 237 2.39e-22 97.4
Msa1222830 AT3G07340.2 67.123 73 23 1 192 263 251 323 3.36e-22 98.2
Msa1222830 AT3G07340.1 67.123 73 23 1 192 263 251 323 4.09e-22 98.2
Msa1222830 AT5G48560.2 72.727 66 17 1 199 263 301 366 4.55e-22 98.2
Msa1222830 AT5G48560.1 72.727 66 17 1 199 263 301 366 5.82e-22 98.2
Msa1222830 AT1G10120.2 64.865 74 25 1 191 263 198 271 1.22e-21 95.9
Msa1222830 AT1G10120.1 64.865 74 25 1 191 263 198 271 1.22e-21 95.9
Msa1222830 AT1G68920.3 71.212 66 18 1 199 263 302 367 1.47e-21 96.7
Msa1222830 AT1G68920.1 71.212 66 18 1 199 263 303 368 1.58e-21 96.7
Msa1222830 AT1G68920.4 71.212 66 18 1 199 263 303 368 1.58e-21 96.7
Msa1222830 AT1G68920.2 71.212 66 18 1 199 263 303 368 1.58e-21 96.7
Msa1222830 AT1G59640.1 57.143 84 35 1 181 263 118 201 4.13e-21 92.4
Msa1222830 AT3G23690.1 69.697 66 19 1 199 263 191 256 4.82e-21 94.4
Msa1222830 AT2G18300.1 68.182 66 20 1 199 263 185 250 4.88e-21 93.6
Msa1222830 AT2G18300.2 68.182 66 20 1 199 263 185 250 5.11e-21 93.6
Msa1222830 AT1G59640.2 57.143 84 35 1 181 263 118 201 5.30e-21 93.6
Msa1222830 AT2G18300.3 68.182 66 20 1 199 263 185 250 7.72e-21 93.6
Msa1222830 AT1G26260.3 66.667 66 21 1 199 263 172 237 7.93e-21 93.2
Msa1222830 AT1G26260.5 66.667 66 21 1 199 263 201 266 9.43e-21 93.6
Msa1222830 AT1G26260.4 66.667 66 21 1 199 263 223 288 1.19e-20 93.2
Msa1222830 AT1G26260.1 66.667 66 21 1 199 263 223 288 1.19e-20 93.2
Msa1222830 AT1G26260.6 66.667 66 21 1 199 263 223 288 1.19e-20 93.2
Msa1222830 AT1G26260.2 66.667 66 21 1 199 263 223 288 1.19e-20 93.2
Msa1222830 AT4G36540.1 66.667 66 21 1 199 263 141 206 1.93e-20 91.3
Msa1222830 AT4G36540.2 66.667 66 21 1 199 263 141 206 1.97e-20 91.3
Msa1222830 AT1G73830.2 66.667 66 21 1 199 263 147 212 4.61e-20 89.4
Msa1222830 AT1G73830.1 66.667 66 21 1 199 263 147 212 4.88e-20 89.4
Msa1222830 AT1G25330.1 58.974 78 30 2 199 275 104 180 1.77e-19 87.0
Msa1222830 AT5G62610.2 49.474 95 47 1 170 263 124 218 1.91e-19 88.2
Msa1222830 AT5G62610.1 49.474 95 47 1 170 263 124 218 1.91e-19 88.2
Msa1222830 AT2G14760.1 60.000 65 26 0 198 262 236 300 2.72e-19 88.6
Msa1222830 AT4G33880.1 60.000 65 26 0 198 262 265 329 4.35e-19 88.2
Msa1222830 AT1G18400.2 62.121 66 24 1 199 263 145 210 1.03e-18 85.5
Msa1222830 AT1G27740.1 58.462 65 27 0 198 262 166 230 1.06e-18 85.5
Msa1222830 AT5G43175.1 44.340 106 54 2 172 275 103 205 1.26e-18 84.7
Msa1222830 AT1G09530.3 53.623 69 32 0 196 264 334 402 1.69e-18 87.8
Msa1222830 AT1G09530.2 53.623 69 32 0 196 264 334 402 1.69e-18 87.8
Msa1222830 AT1G09530.5 53.623 69 32 0 196 264 334 402 1.69e-18 87.8
Msa1222830 AT1G09530.1 53.623 69 32 0 196 264 334 402 1.69e-18 87.8
Msa1222830 AT1G09530.4 53.623 69 32 0 196 264 334 402 1.69e-18 87.8
Msa1222830 AT1G09530.6 53.623 69 32 0 196 264 334 402 1.69e-18 87.8
Msa1222830 AT1G18400.1 62.121 66 24 1 199 263 145 210 1.70e-18 85.1
Msa1222830 AT2G42280.1 47.573 103 48 3 165 265 248 346 1.84e-18 86.7
Msa1222830 AT2G20180.7 59.677 62 25 0 202 263 210 271 2.62e-18 86.7
Msa1222830 AT2G20180.1 59.677 62 25 0 202 263 210 271 2.62e-18 86.7
Msa1222830 AT2G20180.5 59.677 62 25 0 202 263 210 271 2.62e-18 86.7
Msa1222830 AT2G42300.4 62.857 70 25 1 195 263 181 250 2.89e-18 84.7
Msa1222830 AT2G42300.1 62.857 70 25 1 195 263 181 250 4.19e-18 85.1
Msa1222830 AT2G20180.4 59.677 62 25 0 202 263 281 342 4.57e-18 86.3
Msa1222830 AT2G20180.6 59.677 62 25 0 202 263 281 342 4.57e-18 86.3
Msa1222830 AT2G20180.2 59.677 62 25 0 202 263 281 342 4.57e-18 86.3
Msa1222830 AT2G20180.3 59.677 62 25 0 202 263 281 342 4.57e-18 86.3
Msa1222830 AT1G66470.1 44.037 109 51 2 181 279 168 276 4.85e-18 84.3
Msa1222830 AT3G57800.2 62.857 70 25 1 195 263 200 269 8.61e-18 84.7
Msa1222830 AT5G37800.1 43.269 104 55 2 177 279 182 282 1.12e-17 83.6
Msa1222830 AT2G42280.3 48.980 98 44 3 165 260 248 341 1.16e-17 84.3
Msa1222830 AT2G20180.8 61.017 59 23 0 202 260 281 339 2.64e-17 82.8
Msa1222830 AT4G09180.1 57.576 66 27 1 198 262 183 248 4.50e-17 80.9
Msa1222830 AT2G14760.3 51.282 78 25 1 198 262 236 313 5.24e-17 82.0
Msa1222830 AT1G35460.1 57.576 66 27 1 198 262 180 245 7.66e-17 80.1
Msa1222830 AT1G51140.1 45.714 105 45 3 162 265 278 371 8.43e-17 81.6
Msa1222830 AT4G36930.1 61.017 59 23 0 205 263 197 255 1.61e-16 80.9
Msa1222830 AT4G00050.2 53.731 67 31 0 196 262 102 168 1.99e-16 79.7
Msa1222830 AT5G67110.1 61.017 59 22 1 210 267 98 156 4.26e-16 77.0
Msa1222830 AT4G00050.1 53.731 67 31 0 196 262 204 270 5.24e-16 79.7
Msa1222830 AT4G00050.3 53.731 67 31 0 196 262 204 270 5.55e-16 79.3
Msa1222830 AT4G28815.2 43.210 81 46 0 178 258 47 127 2.39e-15 75.5
Msa1222830 AT4G28815.1 43.210 81 46 0 178 258 123 203 5.45e-15 75.5
Msa1222830 AT4G28790.1 50.000 68 34 0 196 263 268 335 7.43e-15 76.3
Msa1222830 AT2G46970.3 43.902 82 41 2 193 274 196 272 4.24e-14 73.9
Msa1222830 AT2G46970.2 43.902 82 41 2 193 274 187 263 4.28e-14 73.6
Msa1222830 AT2G46970.1 43.902 82 41 2 193 274 218 294 4.39e-14 73.9
Msa1222830 AT4G28800.1 44.000 75 38 1 202 276 252 322 6.21e-14 73.6
Msa1222830 AT3G21330.1 57.143 56 24 0 206 261 276 331 6.39e-14 73.2
Msa1222830 AT3G59060.3 59.677 62 25 0 202 263 253 314 9.46e-14 73.2
Msa1222830 AT3G59060.2 59.677 62 25 0 202 263 253 314 9.46e-14 73.2
Msa1222830 AT3G59060.4 59.677 62 25 0 202 263 253 314 9.46e-14 73.2
Msa1222830 AT3G59060.1 59.677 62 25 0 202 263 253 314 9.57e-14 72.8
Msa1222830 AT4G28790.2 48.485 66 34 0 194 259 266 331 1.28e-13 72.0
Msa1222830 AT2G43010.1 61.667 60 23 0 202 261 254 313 1.37e-13 72.4
Msa1222830 AT2G43010.2 61.667 60 23 0 202 261 254 313 1.40e-13 72.4
Msa1222830 AT2G43010.3 61.667 60 23 0 202 261 261 320 1.57e-13 72.4
Msa1222830 AT5G01305.1 50.000 62 31 0 197 258 35 96 1.80e-13 68.6
Msa1222830 AT2G43010.4 61.667 60 23 0 202 261 254 313 1.81e-13 72.0
Msa1222830 AT2G43010.5 61.667 60 23 0 202 261 296 355 1.87e-13 72.0
Msa1222830 AT2G43140.1 55.385 65 28 1 198 261 133 197 2.04e-13 69.3
Msa1222830 AT2G43140.2 55.385 65 28 1 198 261 230 294 2.17e-13 70.9
Msa1222830 AT4G28800.2 41.176 85 49 1 196 280 258 341 7.49e-13 70.1
Msa1222830 AT1G05805.1 47.436 78 36 2 185 261 273 346 1.03e-12 69.3
Msa1222830 AT4G00120.1 47.692 65 33 1 208 271 121 185 2.79e-12 65.9
Msa1222830 AT2G42300.2 68.182 44 14 0 195 238 181 224 1.66e-11 64.3
Msa1222830 AT2G42300.5 68.182 44 14 0 195 238 181 224 2.02e-11 63.9
Msa1222830 AT2G42300.3 68.182 44 14 0 195 238 181 224 2.02e-11 63.9
Msa1222830 AT2G46510.1 38.298 94 49 2 176 267 367 453 4.92e-11 64.7

Find 145 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGTTGTTCATCGTAATT+AGG 0.148685 8_1:+87221871 None:intergenic
ACCATAACAAACCTTTATTA+TGG 0.160798 8_1:-87221924 Msa1222830:CDS
CCACCAATCTTCCTCCTTCC+TGG 0.248518 8_1:-87221963 Msa1222830:CDS
CCCCTCCGTTGCCGTTTGTT+TGG 0.284955 8_1:+87217710 None:intergenic
AGTGCACCAATGTGAATAAA+AGG 0.293223 8_1:+87217113 None:intergenic
AGGTGTTAACGACTTCGTTC+TGG 0.295039 8_1:+87221731 None:intergenic
TGTCGTTGTTGTTATTGTTT+TGG 0.304419 8_1:+87222025 None:intergenic
TGAGAGGATGAAAGCTTTGC+AGG 0.309874 8_1:-87220960 Msa1222830:CDS
CCATAACAAACCTTTATTAT+GGG 0.329132 8_1:-87221923 Msa1222830:CDS
ATTGCAGTGGCAAGAGAAAT+AGG 0.329178 8_1:+87217550 None:intergenic
ATGCTTCTCACCGCCGATTC+CGG 0.331027 8_1:-87221790 Msa1222830:CDS
GAACGATAGGGGCAGAGTTT+TGG 0.337044 8_1:-87221423 Msa1222830:intron
TCACTTTGACTTGGACTTGT+AGG 0.338449 8_1:+87219352 None:intergenic
TCACCGTTAGATGCGGTGAT+AGG 0.343503 8_1:+87217454 None:intergenic
CATGTCTTCTTCCATCAGTT+TGG 0.344323 8_1:+87217618 None:intergenic
CTCAGCCAAGGCAGAAGGTT+AGG 0.345610 8_1:-87221350 Msa1222830:CDS
AGTGTCACCTTGTTTGCATT+AGG 0.362556 8_1:+87220929 None:intergenic
AATAAAGGTTTGTTATGGTT+AGG 0.363417 8_1:+87221928 None:intergenic
GATGCTGTTAACGGACATTC+CGG 0.365589 8_1:+87217417 None:intergenic
ATCTTTGACGATGCTGTTAA+CGG 0.380837 8_1:+87217408 None:intergenic
GAATTGGGGTCCCATAATAA+AGG 0.388368 8_1:+87221913 None:intergenic
CCCATAATAAAGGTTTGTTA+TGG 0.388741 8_1:+87221923 None:intergenic
CAATGTTCTTAAACACTCAT+TGG 0.395588 8_1:-87216936 Msa1222830:three_prime_UTR
TCAGCCTTGCCACTTTCTAT+AGG 0.403207 8_1:-87217182 Msa1222830:three_prime_UTR
ACCTTCTGCCTTGGCTGAGC+CGG 0.408333 8_1:+87221354 None:intergenic
ATAAAGGTTTGTTATGGTTA+GGG 0.408820 8_1:+87221929 None:intergenic
AGCGTTGATCAAAGGGTTCC+TGG 0.409141 8_1:+87217507 None:intergenic
TGTGTTGTTCATCGTAATTA+GGG 0.410506 8_1:+87221872 None:intergenic
GATCTGGTGGTTACGAAACT+TGG 0.434988 8_1:+87221837 None:intergenic
CCCTTTCGGCGATGCTGTGT+GGG 0.435060 8_1:+87221304 None:intergenic
GCTCTCTTCAACGGTTTCTC+CGG 0.441559 8_1:-87221585 Msa1222830:CDS
TAGTGAGATACATACCCTTT+CGG 0.447375 8_1:+87221290 None:intergenic
GTGGAGGAGACCTCCGGAAT+CGG 0.449433 8_1:+87221777 None:intergenic
CTTGCCCTAACCTTCTGCCT+TGG 0.449584 8_1:+87221345 None:intergenic
TATTAGCAGCGTTGATCAAA+GGG 0.452980 8_1:+87217500 None:intergenic
ATGCTGTTAACGGACATTCC+GGG 0.457739 8_1:+87217418 None:intergenic
GGTGTTAACGACTTCGTTCT+GGG 0.465324 8_1:+87221732 None:intergenic
CGTCATGGTGAGGCTTTCGT+TGG 0.465582 8_1:+87217654 None:intergenic
TTCCGTTTGGAAGATGTAAC+GGG 0.465677 8_1:-87217066 Msa1222830:three_prime_UTR
GACAGACAAGGCTTCCATGC+TGG 0.473916 8_1:-87219400 Msa1222830:CDS
TCAGCCAAGGCAGAAGGTTA+GGG 0.474534 8_1:-87221349 Msa1222830:CDS
CATGGTGAGGCTTTCGTTGG+AGG 0.476261 8_1:+87217657 None:intergenic
GGTTGAAAATGATGAGGTTG+AGG 0.476792 8_1:+87221546 None:intergenic
CTGCATGAGGAGAGGAAAGA+AGG 0.478425 8_1:+87222140 None:intergenic
AGGCATGTGGAGGAGACCTC+CGG 0.490529 8_1:+87221771 None:intergenic
CACCGTTAGATGCGGTGATA+GGG 0.491206 8_1:+87217455 None:intergenic
AAGGAGGAAGATTGGTGGAG+AGG 0.494703 8_1:+87221968 None:intergenic
CGTCGTATTTACCTAGACTT+TGG 0.498950 8_1:-87217229 Msa1222830:three_prime_UTR
TCCGTTCAAGCTCTCTTCAA+CGG 0.500853 8_1:-87221594 Msa1222830:CDS
CCCACACAGCATCGCCGAAA+GGG 0.501568 8_1:-87221304 Msa1222830:intron
ACCCTTTCGGCGATGCTGTG+TGG 0.505234 8_1:+87221303 None:intergenic
GATTGCATTTCTCTGCTACA+AGG 0.506138 8_1:+87222117 None:intergenic
GTTCCAGGAAGGAGGAAGAT+TGG 0.509194 8_1:+87221960 None:intergenic
TTTCCGTTTGGAAGATGTAA+CGG 0.511873 8_1:-87217067 Msa1222830:three_prime_UTR
AGCTTGGTTCGTTGCACTCA+CGG 0.516430 8_1:+87221392 None:intergenic
AAAATAAGACCTATAGAAAG+TGG 0.516588 8_1:+87217173 None:intergenic
AGCTCCGGCGAGTGGAGCTC+CGG 0.517913 8_1:-87221373 Msa1222830:CDS
TTGAGTCAATGTGGAGTGGG+AGG 0.519806 8_1:+87222220 None:intergenic
TTATTAGCAGCGTTGATCAA+AGG 0.525147 8_1:+87217499 None:intergenic
AGTGACTGCGTCCAAACAAA+CGG 0.526034 8_1:-87217721 Msa1222830:CDS
AGGGACACCATGGAGAGATC+CGG 0.526947 8_1:+87221566 None:intergenic
CCACCCACGAAACCCTAAAA+CGG 0.528329 8_1:-87217686 Msa1222830:CDS
GAGAGTTTGTTGAGTCAATG+TGG 0.531606 8_1:+87222211 None:intergenic
GCATCAAGTGGCCAAACTGA+TGG 0.531740 8_1:-87217629 Msa1222830:CDS
GTTAGCATCTGCCAAAGTCT+AGG 0.533007 8_1:+87217218 None:intergenic
GGTGATGGGCCATCCTCTCC+CGG 0.535124 8_1:-87217436 Msa1222830:CDS
GAGTGCAACGAACCAAGCTC+CGG 0.538396 8_1:-87221388 Msa1222830:CDS
ACCGTTGAAGAGAGCTTGAA+CGG 0.539080 8_1:+87221593 None:intergenic
AGGGGAATCTCACTTTGACT+TGG 0.539135 8_1:+87219343 None:intergenic
TACCCGTTACATCTTCCAAA+CGG 0.542637 8_1:+87217064 None:intergenic
TGAGCCGGAGCTCCACTCGC+CGG 0.543105 8_1:+87221369 None:intergenic
TTGTTGAGTCAATGTGGAGT+GGG 0.544423 8_1:+87222217 None:intergenic
TCCAAACAAACGGCAACGGA+GGG 0.544554 8_1:-87217711 Msa1222830:CDS
CAAACTGATGGAAGAAGACA+TGG 0.548152 8_1:-87217617 Msa1222830:CDS
GTTAACGGACATTCCGGGAG+AGG 0.549252 8_1:+87217423 None:intergenic
ACGAACCAAGCTCCGGCGAG+TGG 0.549919 8_1:-87221381 Msa1222830:CDS
TGGGAGGAGTCAAAGTCAGC+AGG 0.551562 8_1:+87221751 None:intergenic
GTTGAAAATGATGAGGTTGA+GGG 0.552496 8_1:+87221547 None:intergenic
AGGGGCTGTAGCTCCTCTTG+TGG 0.552998 8_1:-87219081 Msa1222830:CDS
ATGCAATACTTGCAAGGCAA+AGG 0.553212 8_1:-87217586 Msa1222830:CDS
AGTCTAGGAAAATAATGCGT+GGG 0.555057 8_1:-87217262 Msa1222830:three_prime_UTR
ACGGACATTCCGGGAGAGGA+TGG 0.558510 8_1:+87217427 None:intergenic
ACGTGGAGTTTCTCAAGTCT+AGG 0.558522 8_1:-87217277 Msa1222830:three_prime_UTR
AACCCTATCACCGCATCTAA+CGG 0.559814 8_1:-87217457 Msa1222830:CDS
GGTTTCTCCGGATCTCTCCA+TGG 0.559827 8_1:-87221573 Msa1222830:CDS
TGAGTCAATGTGGAGTGGGA+GGG 0.560722 8_1:+87222221 None:intergenic
ATCACCGCATCTAACGGTGA+TGG 0.562234 8_1:-87217451 Msa1222830:CDS
TCACCGCATCTAACGGTGAT+GGG 0.564709 8_1:-87217450 Msa1222830:CDS
GAGAAGCATAAGAGCGGCGG+CGG 0.565137 8_1:+87221804 None:intergenic
CTGGTGGTTACGAAACTTGG+AGG 0.565432 8_1:+87221840 None:intergenic
CTACTGCCACGTGTCACACC+AGG 0.566876 8_1:-87217525 Msa1222830:CDS
ACCCACACAGCATCGCCGAA+AGG 0.569008 8_1:-87221305 Msa1222830:CDS
TATGAATATACTCACGGAGG+AGG 0.570799 8_1:+87221711 None:intergenic
GGCGATGCTGTGTGGGTCGG+TGG 0.575489 8_1:+87221311 None:intergenic
CAAGGCAGAAGGTTAGGGCA+AGG 0.577404 8_1:-87221344 Msa1222830:CDS
CAAAGTCAGCAGGCATGTGG+AGG 0.582463 8_1:+87221761 None:intergenic
TCCGGCTCAGCCAAGGCAGA+AGG 0.583403 8_1:-87221355 Msa1222830:CDS
CCAGGAAGGAGGAAGATTGG+TGG 0.584994 8_1:+87221963 None:intergenic
GGCCACTTGATGCTCCGTCA+TGG 0.585036 8_1:+87217639 None:intergenic
CTTGATGCTCCGTCATGGTG+AGG 0.588381 8_1:+87217644 None:intergenic
TCGAGAGTGTTCCAGGAAGG+AGG 0.588906 8_1:+87221952 None:intergenic
CACCATGACGGAGCATCAAG+TGG 0.590543 8_1:-87217641 Msa1222830:CDS
ATCGATGATCTCATCCAGCA+TGG 0.593330 8_1:+87219386 None:intergenic
GGTGCGTGCGTGTGTGTGTG+TGG 0.593529 8_1:+87222161 None:intergenic
AGTCAAAGTCAGCAGGCATG+TGG 0.593631 8_1:+87221758 None:intergenic
TTTGAGTATGAGCAGATTAG+GGG 0.596866 8_1:-87219108 Msa1222830:CDS
TTCGGCGATGCTGTGTGGGT+CGG 0.599244 8_1:+87221308 None:intergenic
GTCCAAACAAACGGCAACGG+AGG 0.599582 8_1:-87217712 Msa1222830:CDS
TTTGCCTTGCAAGTATTGCA+TGG 0.601415 8_1:+87217588 None:intergenic
CTCTGCTACAAGGCTGCATG+AGG 0.603200 8_1:+87222127 None:intergenic
TTATGTATGGCAGTTACGGA+GGG 0.606270 8_1:-87220993 Msa1222830:intron
TGCGTCCAAACAAACGGCAA+CGG 0.608283 8_1:-87217715 Msa1222830:CDS
TTTATGTATGGCAGTTACGG+AGG 0.609201 8_1:-87220994 Msa1222830:intron
GGGTCGAGAGTGTTCCAGGA+AGG 0.613794 8_1:+87221949 None:intergenic
GTTTGAGAAAATCGTCGTGA+TGG 0.614530 8_1:+87221995 None:intergenic
AAGTCTAGGAAAATAATGCG+TGG 0.617352 8_1:-87217263 Msa1222830:three_prime_UTR
GCTGCTAATAATAATATCAA+CGG 0.618044 8_1:-87217487 Msa1222830:CDS
GATGAGGTTGAGGGACACCA+TGG 0.619769 8_1:+87221556 None:intergenic
GAGGAGACCTCCGGAATCGG+CGG 0.620378 8_1:+87221780 None:intergenic
CTACAAGGCTGCATGAGGAG+AGG 0.625733 8_1:+87222132 None:intergenic
CTTCTCACCGCCGATTCCGG+AGG 0.626580 8_1:-87221787 Msa1222830:CDS
TTTGTTGAGTCAATGTGGAG+TGG 0.628260 8_1:+87222216 None:intergenic
TTGAGTATGAGCAGATTAGG+GGG 0.628679 8_1:-87219107 Msa1222830:CDS
TCTGCCATGCAATACTTGCA+AGG 0.632578 8_1:-87217592 Msa1222830:CDS
ACTTGTTCCTAATGCAAACA+AGG 0.640450 8_1:-87220936 Msa1222830:intron
CCAAACAAACGGCAACGGAG+GGG 0.643439 8_1:-87217710 Msa1222830:CDS
CAGAAGGTTAGGGCAAGGAG+AGG 0.644091 8_1:-87221339 Msa1222830:CDS
CAACGAAAGCCTCACCATGA+CGG 0.648208 8_1:-87217653 Msa1222830:CDS
AAGACCTATAGAAAGTGGCA+AGG 0.652137 8_1:+87217178 None:intergenic
AGGGTTCCTGGTGTGACACG+TGG 0.654023 8_1:+87217519 None:intergenic
TGGCCCATCACCGTTAGATG+CGG 0.659070 8_1:+87217447 None:intergenic
GAGGACATATCAGCCACAAG+AGG 0.664253 8_1:+87219068 None:intergenic
GGTGAGAAGCATAAGAGCGG+CGG 0.668806 8_1:+87221801 None:intergenic
TGTGGATCGACAGACAGACA+AGG 0.682348 8_1:-87219412 Msa1222830:intron
AAGTGGAAAATTTACCTCGG+AGG 0.684381 8_1:+87219049 None:intergenic
TGGCAAGAGAAATAGGCATG+AGG 0.688682 8_1:+87217557 None:intergenic
GGCGGTGAGAAGCATAAGAG+CGG 0.689593 8_1:+87221798 None:intergenic
CGTGGCAGTAGAAATTGCAG+TGG 0.700181 8_1:+87217537 None:intergenic
CGGCGTCTACGACTTAGAAG+CGG 0.702696 8_1:+87217378 None:intergenic
TGTGGCTGATATGTCCTCCG+AGG 0.708103 8_1:-87219063 Msa1222830:intron
TGAGGAGGTTGAAAATGATG+AGG 0.716913 8_1:+87221540 None:intergenic
GTTAACGACTTCGTTCTGGG+AGG 0.721691 8_1:+87221735 None:intergenic
GATGAAAACACAAAATAACG+TGG 0.730759 8_1:-87217294 Msa1222830:three_prime_UTR
GGAGGGAAAGAATTGCTGAG+AGG 0.735960 8_1:-87220976 Msa1222830:CDS
AAACTGATGGAAGAAGACAT+GGG 0.767183 8_1:-87217616 Msa1222830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTAAATTAATAGAAAAATA+TGG + chr8_1:87218557-87218576 None:intergenic 10.0%
!!! AGTAAACTTTTTTTTTTTTA+GGG + chr8_1:87218818-87218837 None:intergenic 10.0%
!!! TAGTAAACTTTTTTTTTTTT+AGG + chr8_1:87218819-87218838 None:intergenic 10.0%
!!! TTTAATTTAGATTAAAATTG+TGG + chr8_1:87218900-87218919 None:intergenic 10.0%
!! AAATAATTAAAATTTCAACA+TGG + chr8_1:87219862-87219881 None:intergenic 10.0%
!!! TGAAATTTTAATTATTTGTT+TGG - chr8_1:87219865-87219884 Msa1222830:intron 10.0%
!! ACTATAAATAATAATAACTT+TGG + chr8_1:87220293-87220312 None:intergenic 10.0%
!!! ATTTTTTATTTCATTGAATT+AGG + chr8_1:87220419-87220438 None:intergenic 10.0%
!! TATTAAAAAAATTAAAAACC+GGG + chr8_1:87220902-87220921 None:intergenic 10.0%
!! AAATAAGAATAAGAAATAAA+AGG - chr8_1:87221257-87221276 Msa1222830:intron 10.0%
!! TAACGTTGTTAATTAATTAA+CGG + chr8_1:87217627-87217646 None:intergenic 15.0%
!!! ATTTGATTTATTTCTCTTTT+GGG - chr8_1:87217851-87217870 Msa1222830:intron 15.0%
!! AAATATCTTGAATAATATGT+TGG + chr8_1:87218653-87218672 None:intergenic 15.0%
!! ACTTATAAACATAATGTAAT+GGG - chr8_1:87219827-87219846 Msa1222830:intron 15.0%
!!! TTTTTCTTCAATATACTTTT+GGG - chr8_1:87219983-87220002 Msa1222830:intron 15.0%
!! AGAAAATATGAATATACTCA+CGG + chr8_1:87217600-87217619 None:intergenic 20.0%
!!! TTAATATTGTTAGCTTTTAC+AGG - chr8_1:87217671-87217690 Msa1222830:CDS 20.0%
!!! GATTTGATTTATTTCTCTTT+TGG - chr8_1:87217850-87217869 Msa1222830:intron 20.0%
!!! GGTAATTTTGTTTTTATGTA+TGG - chr8_1:87218296-87218315 Msa1222830:intron 20.0%
!! AATTAATCACATGAGAAAAT+TGG + chr8_1:87218776-87218795 None:intergenic 20.0%
!! AGTTTACTATATGATTAATC+TGG - chr8_1:87218830-87218849 Msa1222830:intron 20.0%
!! AAATTAAATTTGATATCTCC+TGG - chr8_1:87218912-87218931 Msa1222830:intron 20.0%
!!! ATGAATACTTTAAAGCTTTT+TGG - chr8_1:87219011-87219030 Msa1222830:intron 20.0%
!! TCTCTTTATCACAAAAAATT+CGG + chr8_1:87219051-87219070 None:intergenic 20.0%
!!! AAATCAAATTATTGTCCTTT+TGG - chr8_1:87219095-87219114 Msa1222830:CDS 20.0%
!!! TTTAGTATAGTTTTCATCAT+TGG - chr8_1:87219143-87219162 Msa1222830:intron 20.0%
!! AATTATGCTCAAAAAATTGT+CGG + chr8_1:87219345-87219364 None:intergenic 20.0%
!! CTACAAATTGAAAATATCAT+AGG + chr8_1:87219396-87219415 None:intergenic 20.0%
!! TTTCATTGTATGAACATATT+AGG - chr8_1:87219488-87219507 Msa1222830:intron 20.0%
!!! TTTTCTTAATTGACTGAATA+CGG - chr8_1:87219580-87219599 Msa1222830:intron 20.0%
!!! ACATTTTGAGAAATTTATTG+AGG + chr8_1:87219727-87219746 None:intergenic 20.0%
!! TCAATAAATTTCTCAAAATG+TGG - chr8_1:87219726-87219745 Msa1222830:intron 20.0%
!! CACTTATAAACATAATGTAA+TGG - chr8_1:87219826-87219845 Msa1222830:intron 20.0%
!! AAGTATATTGAAGAAAAAGA+GGG + chr8_1:87219981-87220000 None:intergenic 20.0%
!! AAAGTATATTGAAGAAAAAG+AGG + chr8_1:87219982-87220001 None:intergenic 20.0%
!!! CTTTTTCTTCAATATACTTT+TGG - chr8_1:87219982-87220001 Msa1222830:intron 20.0%
!! TCTCAAGTTAAATTATTTCA+AGG - chr8_1:87220118-87220137 Msa1222830:intron 20.0%
!!! TTTCTTTTTTGAAAGATCAA+TGG + chr8_1:87220349-87220368 None:intergenic 20.0%
!! GTCTAACAAAAAAATAAAGT+TGG + chr8_1:87220607-87220626 None:intergenic 20.0%
!! TTAAACATTACCATTGTAAA+TGG + chr8_1:87220629-87220648 None:intergenic 20.0%
!! TAAGAATAAGAAATAAAAGG+TGG - chr8_1:87221260-87221279 Msa1222830:intron 20.0%
!!! TTTAGTTTTTATTTTCCGTT+TGG - chr8_1:87222223-87222242 Msa1222830:five_prime_UTR 20.0%
!!! TATTGTTTTGGATCTGATTT+TGG + chr8_1:87217268-87217287 None:intergenic 25.0%
!!! ATAAAGGTTTGTTATGGTTA+GGG + chr8_1:87217376-87217395 None:intergenic 25.0%
!!! AATAAAGGTTTGTTATGGTT+AGG + chr8_1:87217377-87217396 None:intergenic 25.0%
! ACCATAACAAACCTTTATTA+TGG - chr8_1:87217378-87217397 Msa1222830:exon 25.0%
! CCATAACAAACCTTTATTAT+GGG - chr8_1:87217379-87217398 Msa1222830:exon 25.0%
! TAAGAAAAAAATAGAACCTG+AGG + chr8_1:87217783-87217802 None:intergenic 25.0%
!!! CAATTTTTTCAGAGAAAATG+CGG - chr8_1:87218133-87218152 Msa1222830:intron 25.0%
! GTAATAGTACAATGGTAATT+TGG - chr8_1:87218275-87218294 Msa1222830:intron 25.0%
! CTCTATTTAATGCTCAATTA+TGG - chr8_1:87218399-87218418 Msa1222830:intron 25.0%
! AAATATGGTCAAAGTAAGTT+AGG + chr8_1:87218542-87218561 None:intergenic 25.0%
! TTAAGCTCAAAATTATGCAT+TGG - chr8_1:87218671-87218690 Msa1222830:intron 25.0%
!!! ATACTTTAAAGCTTTTTGGA+AGG - chr8_1:87219015-87219034 Msa1222830:intron 25.0%
!!! TAATTTTTGACTTTCTTCTG+AGG - chr8_1:87219231-87219250 Msa1222830:intron 25.0%
! ATTATGCTCAAAAAATTGTC+GGG + chr8_1:87219344-87219363 None:intergenic 25.0%
! CAAGTAACAGAATAGTTAAT+TGG + chr8_1:87219420-87219439 None:intergenic 25.0%
! TTAATTATTTGTTTGGTCTG+TGG - chr8_1:87219872-87219891 Msa1222830:intron 25.0%
! AGTATATTGAAGAAAAAGAG+GGG + chr8_1:87219980-87219999 None:intergenic 25.0%
!! TAAAAAAGAAACTTTTCTCG+TGG - chr8_1:87220312-87220331 Msa1222830:intron 25.0%
! TTTCTTGCTTTCTCAATTTA+TGG + chr8_1:87220481-87220500 None:intergenic 25.0%
!! TTTTGTTAGACCATTTACAA+TGG - chr8_1:87220616-87220635 Msa1222830:intron 25.0%
! TTTCTCTATAAATAGAGACT+TGG - chr8_1:87220995-87221014 Msa1222830:intron 25.0%
! AATAAGAAATAAAAGGTGGT+GGG - chr8_1:87221264-87221283 Msa1222830:intron 25.0%
! TGTTGAATGAAAAAAACCAT+TGG - chr8_1:87221293-87221312 Msa1222830:intron 25.0%
! GCTGCTAATAATAATATCAA+CGG - chr8_1:87221815-87221834 Msa1222830:CDS 25.0%
! AAAATAAGACCTATAGAAAG+TGG + chr8_1:87222132-87222151 None:intergenic 25.0%
!! TGTCGTTGTTGTTATTGTTT+TGG + chr8_1:87217280-87217299 None:intergenic 30.0%
!! CCCATAATAAAGGTTTGTTA+TGG + chr8_1:87217382-87217401 None:intergenic 30.0%
! TGTGTTGTTCATCGTAATTA+GGG + chr8_1:87217433-87217452 None:intergenic 30.0%
! TTGTGTTGTTCATCGTAATT+AGG + chr8_1:87217434-87217453 None:intergenic 30.0%
AAATATGAATATACTCACGG+AGG + chr8_1:87217597-87217616 None:intergenic 30.0%
!! TTTTGGGAATTTGAACGATA+GGG - chr8_1:87217867-87217886 Msa1222830:intron 30.0%
! TCTGAAAAAATTGCACGTTT+TGG + chr8_1:87218126-87218145 None:intergenic 30.0%
ACAGCATATAAACCCTTATT+TGG - chr8_1:87218173-87218192 Msa1222830:intron 30.0%
! CAGCATATAAACCCTTATTT+GGG - chr8_1:87218174-87218193 Msa1222830:intron 30.0%
! ATATAAACCCTTATTTGGGA+GGG - chr8_1:87218178-87218197 Msa1222830:intron 30.0%
AACAGAAACAGAATGATAGT+AGG + chr8_1:87218210-87218229 None:intergenic 30.0%
!! CTCTTTCTTTTGTTTCCTTT+TGG - chr8_1:87218238-87218257 Msa1222830:intron 30.0%
! GTTTTTATGTATGGCAGTTA+CGG - chr8_1:87218305-87218324 Msa1222830:intron 30.0%
TTGAAATGAGTCATCTATTG+CGG + chr8_1:87218504-87218523 None:intergenic 30.0%
!!! TTTTTTCCAAAAGCTGCAAT+GGG + chr8_1:87219078-87219097 None:intergenic 30.0%
!!! ATTTTTTCCAAAAGCTGCAA+TGG + chr8_1:87219079-87219098 None:intergenic 30.0%
! TCAAATTATTGTCCTTTTGG+TGG - chr8_1:87219098-87219117 Msa1222830:CDS 30.0%
TTATGCTCAAAAAATTGTCG+GGG + chr8_1:87219343-87219362 None:intergenic 30.0%
! TCTGATGTCATTTCTTTGTA+AGG - chr8_1:87219516-87219535 Msa1222830:intron 30.0%
!! TTTTGAGTATGAGCAGATTA+GGG - chr8_1:87220193-87220212 Msa1222830:intron 30.0%
AGAAAGTGGAAAATTTACCT+CGG + chr8_1:87220259-87220278 None:intergenic 30.0%
TGGTAAATTCAGAAAGAAAG+TGG + chr8_1:87220273-87220292 None:intergenic 30.0%
TGCTTTCTCAATTTATGGTA+GGG + chr8_1:87220476-87220495 None:intergenic 30.0%
TTGCTTTCTCAATTTATGGT+AGG + chr8_1:87220477-87220496 None:intergenic 30.0%
ATTGAGAAAGCAAGAAATTG+AGG - chr8_1:87220484-87220503 Msa1222830:intron 30.0%
ATGCTGAGTATTTCTTCTTA+TGG + chr8_1:87220539-87220558 None:intergenic 30.0%
!! AAGAAGAATTCTGGAATGAT+TGG - chr8_1:87220849-87220868 Msa1222830:intron 30.0%
!! AGAAGAATTCTGGAATGATT+GGG - chr8_1:87220850-87220869 Msa1222830:intron 30.0%
GAAGAAGATAGTGAAAAACT+TGG + chr8_1:87221050-87221069 None:intergenic 30.0%
GAATAAGAAATAAAAGGTGG+TGG - chr8_1:87221263-87221282 Msa1222830:intron 30.0%
ATAAGAAATAAAAGGTGGTG+GGG - chr8_1:87221265-87221284 Msa1222830:intron 30.0%
AATGAAAAAAACCATTGGAG+AGG - chr8_1:87221298-87221317 Msa1222830:intron 30.0%
TTAAGAGAGAGAAGATAATG+TGG - chr8_1:87221343-87221362 Msa1222830:CDS 30.0%
AAAGCTAAGACCATTTACAA+TGG + chr8_1:87221419-87221438 None:intergenic 30.0%
GAAAAAGTCAACGAAACAAA+CGG + chr8_1:87221947-87221966 None:intergenic 30.0%
GATGAAAACACAAAATAACG+TGG - chr8_1:87222008-87222027 Msa1222830:CDS 30.0%
! GACTTTCCTTTTATTCACAT+TGG - chr8_1:87222183-87222202 Msa1222830:five_prime_UTR 30.0%
CAATGTTCTTAAACACTCAT+TGG - chr8_1:87222366-87222385 Msa1222830:five_prime_UTR 30.0%
!! ATCTGATTTTGGAGAGGAAT+GGG + chr8_1:87217257-87217276 None:intergenic 35.0%
!! TTTTGGATCTGATTTTGGAG+AGG + chr8_1:87217263-87217282 None:intergenic 35.0%
! TGACATTTTCATCGGAATTG+GGG + chr8_1:87217406-87217425 None:intergenic 35.0%
! GTGACATTTTCATCGGAATT+GGG + chr8_1:87217407-87217426 None:intergenic 35.0%
! AGTGACATTTTCATCGGAAT+TGG + chr8_1:87217408-87217427 None:intergenic 35.0%
! AGGGAAAGTGACATTTTCAT+CGG + chr8_1:87217414-87217433 None:intergenic 35.0%
GTTGAAAATGATGAGGTTGA+GGG + chr8_1:87217758-87217777 None:intergenic 35.0%
GAAAAAAATAGAACCTGAGG+AGG + chr8_1:87217780-87217799 None:intergenic 35.0%
!! CTTTTGGGAATTTGAACGAT+AGG - chr8_1:87217866-87217885 Msa1222830:intron 35.0%
TTTGGGAATTTGAACGATAG+GGG - chr8_1:87217868-87217887 Msa1222830:intron 35.0%
TAGTGAGATACATACCCTTT+CGG + chr8_1:87218015-87218034 None:intergenic 35.0%
GTATCTCACTATAACGTGTT+TGG - chr8_1:87218024-87218043 Msa1222830:intron 35.0%
TGTTTGGTTGTGCAGAAAAT+TGG - chr8_1:87218040-87218059 Msa1222830:intron 35.0%
GTTTGGTTGTGCAGAAAATT+GGG - chr8_1:87218041-87218060 Msa1222830:intron 35.0%
! CATATAAACCCTTATTTGGG+AGG - chr8_1:87218177-87218196 Msa1222830:intron 35.0%
! TGTTTCCTTTTGGATCAATG+TGG - chr8_1:87218248-87218267 Msa1222830:intron 35.0%
ACTTGTTCCTAATGCAAACA+AGG - chr8_1:87218366-87218385 Msa1222830:intron 35.0%
TGAAATGAGTCATCTATTGC+GGG + chr8_1:87218503-87218522 None:intergenic 35.0%
! TATGCATTGGCATGCTTAAT+AGG - chr8_1:87218684-87218703 Msa1222830:intron 35.0%
! ATGCATTGGCATGCTTAATA+GGG - chr8_1:87218685-87218704 Msa1222830:intron 35.0%
TCAACTGTGTCTTGTATTGT+GGG - chr8_1:87218715-87218734 Msa1222830:intron 35.0%
! GTACATGATGTTTAGAGTTG+TGG + chr8_1:87218948-87218967 None:intergenic 35.0%
CCAAAACCCATTCTTATGTA+CGG - chr8_1:87219168-87219187 Msa1222830:intron 35.0%
CAAAACCCATTCTTATGTAC+GGG - chr8_1:87219169-87219188 Msa1222830:intron 35.0%
TTCTTTGTAAGGAAGTCGAT+TGG - chr8_1:87219527-87219546 Msa1222830:intron 35.0%
TCTTTGTAAGGAAGTCGATT+GGG - chr8_1:87219528-87219547 Msa1222830:intron 35.0%
TTTGTTACCTGTTGCGTAAT+TGG - chr8_1:87220161-87220180 Msa1222830:intron 35.0%
TGTAAATCCAATTACGCAAC+AGG + chr8_1:87220171-87220190 None:intergenic 35.0%
TGTTGCGTAATTGGATTTAC+AGG - chr8_1:87220170-87220189 Msa1222830:intron 35.0%
!! GTTTTGAGTATGAGCAGATT+AGG - chr8_1:87220192-87220211 Msa1222830:intron 35.0%
TTTGAGTATGAGCAGATTAG+GGG - chr8_1:87220194-87220213 Msa1222830:intron 35.0%
GGAAAAAGCAGAAGAAAAGT+GGG + chr8_1:87220381-87220400 None:intergenic 35.0%
!!! CACTTTTCTTCTGCTTTTTC+CGG - chr8_1:87220380-87220399 Msa1222830:intron 35.0%
ATTAGGAAGAAACAAGCAAC+CGG + chr8_1:87220402-87220421 None:intergenic 35.0%
CAGTCCAATGGTATGTTTAA+TGG - chr8_1:87220671-87220690 Msa1222830:intron 35.0%
CACACCATTAAACATACCAT+TGG + chr8_1:87220678-87220697 None:intergenic 35.0%
!! GAAGAATTCTGGAATGATTG+GGG - chr8_1:87220851-87220870 Msa1222830:intron 35.0%
! GAGACTTGGTTCATTTCATT+TGG - chr8_1:87221009-87221028 Msa1222830:intron 35.0%
TTCAACTTTAACCTCTCCAA+TGG + chr8_1:87221312-87221331 None:intergenic 35.0%
! AGAAGATAATGTGGAGTGTT+GGG - chr8_1:87221352-87221371 Msa1222830:CDS 35.0%
! AGTGTTGGGAATTGAAAAAG+TGG - chr8_1:87221366-87221385 Msa1222830:CDS 35.0%
GTGTTGGGAATTGAAAAAGT+GGG - chr8_1:87221367-87221386 Msa1222830:CDS 35.0%
!! ATTGAAAAAGTGGGTGTTGA+AGG - chr8_1:87221376-87221395 Msa1222830:CDS 35.0%
!! TTGAAAAAGTGGGTGTTGAA+GGG - chr8_1:87221377-87221396 Msa1222830:CDS 35.0%
!! TGTTGAAGGGTGTTTAATGT+TGG - chr8_1:87221390-87221409 Msa1222830:CDS 35.0%
!! ATGTTGGTGACCATTGTAAA+TGG - chr8_1:87221406-87221425 Msa1222830:CDS 35.0%
AAACTGATGGAAGAAGACAT+GGG - chr8_1:87221686-87221705 Msa1222830:intron 35.0%
!! TATTAGCAGCGTTGATCAAA+GGG + chr8_1:87221805-87221824 None:intergenic 35.0%
!! TTATTAGCAGCGTTGATCAA+AGG + chr8_1:87221806-87221825 None:intergenic 35.0%
ATCTTTGACGATGCTGTTAA+CGG + chr8_1:87221897-87221916 None:intergenic 35.0%
AAGTCTAGGAAAATAATGCG+TGG - chr8_1:87222039-87222058 Msa1222830:CDS 35.0%
AGTCTAGGAAAATAATGCGT+GGG - chr8_1:87222040-87222059 Msa1222830:CDS 35.0%
AGTGCACCAATGTGAATAAA+AGG + chr8_1:87222192-87222211 None:intergenic 35.0%
TTTCCGTTTGGAAGATGTAA+CGG - chr8_1:87222235-87222254 Msa1222830:five_prime_UTR 35.0%
TTGTTGAGTCAATGTGGAGT+GGG + chr8_1:87217088-87217107 None:intergenic 40.0%
TTTGTTGAGTCAATGTGGAG+TGG + chr8_1:87217089-87217108 None:intergenic 40.0%
!! GAGAGTTTGTTGAGTCAATG+TGG + chr8_1:87217094-87217113 None:intergenic 40.0%
GATTGCATTTCTCTGCTACA+AGG + chr8_1:87217188-87217207 None:intergenic 40.0%
!! GATCTGATTTTGGAGAGGAA+TGG + chr8_1:87217258-87217277 None:intergenic 40.0%
GTTTGAGAAAATCGTCGTGA+TGG + chr8_1:87217310-87217329 None:intergenic 40.0%
GAATTGGGGTCCCATAATAA+AGG + chr8_1:87217392-87217411 None:intergenic 40.0%
TATGAATATACTCACGGAGG+AGG + chr8_1:87217594-87217613 None:intergenic 40.0%
GGTTGAAAATGATGAGGTTG+AGG + chr8_1:87217759-87217778 None:intergenic 40.0%
TGAGGAGGTTGAAAATGATG+AGG + chr8_1:87217765-87217784 None:intergenic 40.0%
! TCATCATTTTCAACCTCCTC+AGG - chr8_1:87217764-87217783 Msa1222830:intron 40.0%
AAAATGCGGTTGTTTGTCAG+TGG - chr8_1:87218147-87218166 Msa1222830:intron 40.0%
AACAGAATGATAGTAGGCGT+AGG + chr8_1:87218204-87218223 None:intergenic 40.0%
! TCCTTTTGGATCAATGTGGA+AGG - chr8_1:87218252-87218271 Msa1222830:intron 40.0%
! CCTTTTGGATCAATGTGGAA+GGG - chr8_1:87218253-87218272 Msa1222830:intron 40.0%
GTGGAAGGGTAATAGTACAA+TGG - chr8_1:87218267-87218286 Msa1222830:intron 40.0%
TTTATGTATGGCAGTTACGG+AGG - chr8_1:87218308-87218327 Msa1222830:intron 40.0%
TTATGTATGGCAGTTACGGA+GGG - chr8_1:87218309-87218328 Msa1222830:intron 40.0%
! AGTGTCACCTTGTTTGCATT+AGG + chr8_1:87218376-87218395 None:intergenic 40.0%
GTCAACTGTGTCTTGTATTG+TGG - chr8_1:87218714-87218733 Msa1222830:intron 40.0%
AGTTGTGGTAACTTCAATCC+AGG + chr8_1:87218933-87218952 None:intergenic 40.0%
!! ATGAGCTTTGAACCACCAAA+AGG + chr8_1:87219113-87219132 None:intergenic 40.0%
!! CCGTACATAAGAATGGGTTT+TGG + chr8_1:87219171-87219190 None:intergenic 40.0%
CACAACCCGTACATAAGAAT+GGG + chr8_1:87219177-87219196 None:intergenic 40.0%
AAACCAAATGACTATCCTCC+CGG + chr8_1:87219273-87219292 None:intergenic 40.0%
!!! ACGCCACTTTTAATCTAGTG+TGG - chr8_1:87219619-87219638 Msa1222830:intron 40.0%
!! CCACTTTTAATCTAGTGTGG+CGG - chr8_1:87219622-87219641 Msa1222830:intron 40.0%
GCTCAATCAGCTAAAACAAG+TGG + chr8_1:87219678-87219697 None:intergenic 40.0%
!! TCACTTTGACTTGGACTTGT+AGG + chr8_1:87219953-87219972 None:intergenic 40.0%
TTGAGTATGAGCAGATTAGG+GGG - chr8_1:87220195-87220214 Msa1222830:intron 40.0%
AAGTGGAAAATTTACCTCGG+AGG + chr8_1:87220256-87220275 None:intergenic 40.0%
CGGAAAAAGCAGAAGAAAAG+TGG + chr8_1:87220382-87220401 None:intergenic 40.0%
! CATCTGTCTCTCTATTTTCG+TGG + chr8_1:87220562-87220581 None:intergenic 40.0%
AACACCAAAAAGCAGTCCAA+TGG - chr8_1:87220659-87220678 Msa1222830:intron 40.0%
!! CATACCATTGGACTGCTTTT+TGG + chr8_1:87220666-87220685 None:intergenic 40.0%
ATGGTGTGTTGAATGTGACA+TGG - chr8_1:87220690-87220709 Msa1222830:intron 40.0%
CGGCTTAATTGGACCAAATA+CGG - chr8_1:87220773-87220792 Msa1222830:intron 40.0%
AAAACCGGGCAACCAATAAA+AGG + chr8_1:87220888-87220907 None:intergenic 40.0%
GAGAAGATAATGTGGAGTGT+TGG - chr8_1:87221351-87221370 Msa1222830:CDS 40.0%
!!! ACTTTTGGGTTGTCGTTTTG+TGG + chr8_1:87221483-87221502 None:intergenic 40.0%
! AGAACACGTGTCACTGTTAA+GGG + chr8_1:87221542-87221561 None:intergenic 40.0%
! AAGAACACGTGTCACTGTTA+AGG + chr8_1:87221543-87221562 None:intergenic 40.0%
!!! ACGTGTTCTTTTTTCCTTGC+AGG - chr8_1:87221553-87221572 Msa1222830:CDS 40.0%
!!! CGTGTTCTTTTTTCCTTGCA+GGG - chr8_1:87221554-87221573 Msa1222830:CDS 40.0%
CATGTCTTCTTCCATCAGTT+TGG + chr8_1:87221687-87221706 None:intergenic 40.0%
CAAACTGATGGAAGAAGACA+TGG - chr8_1:87221685-87221704 Msa1222830:intron 40.0%
! TTTGCCTTGCAAGTATTGCA+TGG + chr8_1:87221717-87221736 None:intergenic 40.0%
ATGCAATACTTGCAAGGCAA+AGG - chr8_1:87221716-87221735 Msa1222830:intron 40.0%
ATTGCAGTGGCAAGAGAAAT+AGG + chr8_1:87221755-87221774 None:intergenic 40.0%
CGTCGTATTTACCTAGACTT+TGG - chr8_1:87222073-87222092 Msa1222830:CDS 40.0%
AAGACCTATAGAAAGTGGCA+AGG + chr8_1:87222127-87222146 None:intergenic 40.0%
TTCCGTTTGGAAGATGTAAC+GGG - chr8_1:87222236-87222255 Msa1222830:five_prime_UTR 40.0%
TACCCGTTACATCTTCCAAA+CGG + chr8_1:87222241-87222260 None:intergenic 40.0%
AGAGAGAGAGAGAGAGAGAA+TGG + chr8_1:87216958-87216977 None:intergenic 45.0%
TGTGTGTGTGTGGAAGTTAG+AGG + chr8_1:87217134-87217153 None:intergenic 45.0%
GATCTGGTGGTTACGAAACT+TGG + chr8_1:87217468-87217487 None:intergenic 45.0%
GGTGTTAACGACTTCGTTCT+GGG + chr8_1:87217573-87217592 None:intergenic 45.0%
AGGTGTTAACGACTTCGTTC+TGG + chr8_1:87217574-87217593 None:intergenic 45.0%
!!! TGTTAGCTTTTACAGGCTGC+TGG - chr8_1:87217678-87217697 Msa1222830:CDS 45.0%
TCCGTTCAAGCTCTCTTCAA+CGG - chr8_1:87217708-87217727 Msa1222830:CDS 45.0%
ACCGTTGAAGAGAGCTTGAA+CGG + chr8_1:87217712-87217731 None:intergenic 45.0%
CCCTTCCACATTGATCCAAA+AGG + chr8_1:87218256-87218275 None:intergenic 45.0%
TGAGAGGATGAAAGCTTTGC+AGG - chr8_1:87218342-87218361 Msa1222830:intron 45.0%
ATGAGTCATCTATTGCGGGA+CGG + chr8_1:87218499-87218518 None:intergenic 45.0%
CTGTGTCTTGTATTGTGGGA+CGG - chr8_1:87218719-87218738 Msa1222830:intron 45.0%
! GAACAACCCATTGCAGCTTT+TGG - chr8_1:87219069-87219088 Msa1222830:CDS 45.0%
CCACAACCCGTACATAAGAA+TGG + chr8_1:87219178-87219197 None:intergenic 45.0%
! CCATTCTTATGTACGGGTTG+TGG - chr8_1:87219175-87219194 Msa1222830:intron 45.0%
TGTAAGGAAGTCGATTGGGT+CGG - chr8_1:87219532-87219551 Msa1222830:intron 45.0%
CCGCCACACTAGATTAAAAG+TGG + chr8_1:87219625-87219644 None:intergenic 45.0%
ATCGATGATCTCATCCAGCA+TGG + chr8_1:87219919-87219938 None:intergenic 45.0%
AGGGGAATCTCACTTTGACT+TGG + chr8_1:87219962-87219981 None:intergenic 45.0%
ATGTGACATGGATGAGAGAG+AGG - chr8_1:87220702-87220721 Msa1222830:intron 45.0%
CGGAGAGAGAAGAAGAATTC+TGG - chr8_1:87220840-87220859 Msa1222830:intron 45.0%
!! TTGGCCTTTTATTGGTTGCC+CGG - chr8_1:87220881-87220900 Msa1222830:intron 45.0%
!!! TTGCTACGCGTGCTACTTTT+GGG + chr8_1:87221497-87221516 None:intergenic 45.0%
! GAACACGTGTCACTGTTAAG+GGG + chr8_1:87221541-87221560 None:intergenic 45.0%
AGTGACTGCGTCCAAACAAA+CGG - chr8_1:87221581-87221600 Msa1222830:CDS 45.0%
TCTGCCATGCAATACTTGCA+AGG - chr8_1:87221710-87221729 Msa1222830:intron 45.0%
TGGCAAGAGAAATAGGCATG+AGG + chr8_1:87221748-87221767 None:intergenic 45.0%
AACCCTATCACCGCATCTAA+CGG - chr8_1:87221845-87221864 Msa1222830:CDS 45.0%
! ATGCTGTTAACGGACATTCC+GGG + chr8_1:87221887-87221906 None:intergenic 45.0%
! GATGCTGTTAACGGACATTC+CGG + chr8_1:87221888-87221907 None:intergenic 45.0%
ACGTGGAGTTTCTCAAGTCT+AGG - chr8_1:87222025-87222044 Msa1222830:CDS 45.0%
GTTAGCATCTGCCAAAGTCT+AGG + chr8_1:87222087-87222106 None:intergenic 45.0%
!! TCAGCCTTGCCACTTTCTAT+AGG - chr8_1:87222120-87222139 Msa1222830:CDS 45.0%
!!! TTTTTTTATCATAAAATTTA+TGG - chr8_1:87219701-87219720 Msa1222830:intron 5.0%
!! TTATTAAAAAAATTAAAAAC+CGG + chr8_1:87220903-87220922 None:intergenic 5.0%
TGAGTCAATGTGGAGTGGGA+GGG + chr8_1:87217084-87217103 None:intergenic 50.0%
TTGAGTCAATGTGGAGTGGG+AGG + chr8_1:87217085-87217104 None:intergenic 50.0%
CTGCATGAGGAGAGGAAAGA+AGG + chr8_1:87217165-87217184 None:intergenic 50.0%
AAGGAGGAAGATTGGTGGAG+AGG + chr8_1:87217337-87217356 None:intergenic 50.0%
GTTCCAGGAAGGAGGAAGAT+TGG + chr8_1:87217345-87217364 None:intergenic 50.0%
CTGGTGGTTACGAAACTTGG+AGG + chr8_1:87217465-87217484 None:intergenic 50.0%
!! CGGTTTTGTCAGTGATCTGG+TGG + chr8_1:87217481-87217500 None:intergenic 50.0%
AGTCAAAGTCAGCAGGCATG+TGG + chr8_1:87217547-87217566 None:intergenic 50.0%
! GTTAACGACTTCGTTCTGGG+AGG + chr8_1:87217570-87217589 None:intergenic 50.0%
GCTCTCTTCAACGGTTTCTC+CGG - chr8_1:87217717-87217736 Msa1222830:CDS 50.0%
! GAACGATAGGGGCAGAGTTT+TGG - chr8_1:87217879-87217898 Msa1222830:intron 50.0%
!!! TAGGGGCAGAGTTTTGGAAG+TGG - chr8_1:87217885-87217904 Msa1222830:intron 50.0%
! AGCTTGGTTCGTTGCACTCA+CGG + chr8_1:87217913-87217932 None:intergenic 50.0%
TCAGCCAAGGCAGAAGGTTA+GGG - chr8_1:87217953-87217972 Msa1222830:intron 50.0%
GGAGGGAAAGAATTGCTGAG+AGG - chr8_1:87218326-87218345 Msa1222830:intron 50.0%
TGTCTTGTATTGTGGGACGG+AGG - chr8_1:87218722-87218741 Msa1222830:intron 50.0%
GTCTTGTATTGTGGGACGGA+GGG - chr8_1:87218723-87218742 Msa1222830:intron 50.0%
AAATGACTATCCTCCCGGCA+CGG + chr8_1:87219268-87219287 None:intergenic 50.0%
TGTGGATCGACAGACAGACA+AGG - chr8_1:87219890-87219909 Msa1222830:intron 50.0%
GAGGACATATCAGCCACAAG+AGG + chr8_1:87220237-87220256 None:intergenic 50.0%
TCAACACAGTTGAACCCTGC+CGG - chr8_1:87220735-87220754 Msa1222830:intron 50.0%
TCCAATTAAGCCGAGACACG+TGG + chr8_1:87220766-87220785 None:intergenic 50.0%
!!! GACGCGTGTTGGCCTTTTAT+TGG - chr8_1:87220873-87220892 Msa1222830:intron 50.0%
!!! GTTGCTACGCGTGCTACTTT+TGG + chr8_1:87221498-87221517 None:intergenic 50.0%
TCACTGTTAAGGGGAGAGAG+TGG + chr8_1:87221532-87221551 None:intergenic 50.0%
TGCGTCCAAACAAACGGCAA+CGG - chr8_1:87221587-87221606 Msa1222830:CDS 50.0%
TCCAAACAAACGGCAACGGA+GGG - chr8_1:87221591-87221610 Msa1222830:CDS 50.0%
CCACCCACGAAACCCTAAAA+CGG - chr8_1:87221616-87221635 Msa1222830:intron 50.0%
!!! ACGCCGTTTTAGGGTTTCGT+GGG + chr8_1:87221622-87221641 None:intergenic 50.0%
CAACGAAAGCCTCACCATGA+CGG - chr8_1:87221649-87221668 Msa1222830:intron 50.0%
GCATCAAGTGGCCAAACTGA+TGG - chr8_1:87221673-87221692 Msa1222830:intron 50.0%
CGTGGCAGTAGAAATTGCAG+TGG + chr8_1:87221768-87221787 None:intergenic 50.0%
!! AGCGTTGATCAAAGGGTTCC+TGG + chr8_1:87221798-87221817 None:intergenic 50.0%
CACCGTTAGATGCGGTGATA+GGG + chr8_1:87221850-87221869 None:intergenic 50.0%
TCACCGTTAGATGCGGTGAT+AGG + chr8_1:87221851-87221870 None:intergenic 50.0%
ATCACCGCATCTAACGGTGA+TGG - chr8_1:87221851-87221870 Msa1222830:CDS 50.0%
TCACCGCATCTAACGGTGAT+GGG - chr8_1:87221852-87221871 Msa1222830:CDS 50.0%
CTACAAGGCTGCATGAGGAG+AGG + chr8_1:87217173-87217192 None:intergenic 55.0%
CTCTGCTACAAGGCTGCATG+AGG + chr8_1:87217178-87217197 None:intergenic 55.0%
CCAGGAAGGAGGAAGATTGG+TGG + chr8_1:87217342-87217361 None:intergenic 55.0%
CCACCAATCTTCCTCCTTCC+TGG - chr8_1:87217339-87217358 Msa1222830:three_prime_UTR 55.0%
!! TCGAGAGTGTTCCAGGAAGG+AGG + chr8_1:87217353-87217372 None:intergenic 55.0%
!! GTTAGGGTCGAGAGTGTTCC+AGG + chr8_1:87217360-87217379 None:intergenic 55.0%
!! CGGCGGTTTTGTCAGTGATC+TGG + chr8_1:87217484-87217503 None:intergenic 55.0%
! GGTGAGAAGCATAAGAGCGG+CGG + chr8_1:87217504-87217523 None:intergenic 55.0%
! GGCGGTGAGAAGCATAAGAG+CGG + chr8_1:87217507-87217526 None:intergenic 55.0%
!! ATGCTTCTCACCGCCGATTC+CGG - chr8_1:87217512-87217531 Msa1222830:CDS 55.0%
CAAAGTCAGCAGGCATGTGG+AGG + chr8_1:87217544-87217563 None:intergenic 55.0%
TGGGAGGAGTCAAAGTCAGC+AGG + chr8_1:87217554-87217573 None:intergenic 55.0%
GGTTTCTCCGGATCTCTCCA+TGG - chr8_1:87217729-87217748 Msa1222830:CDS 55.0%
AGGGACACCATGGAGAGATC+CGG + chr8_1:87217739-87217758 None:intergenic 55.0%
GATGAGGTTGAGGGACACCA+TGG + chr8_1:87217749-87217768 None:intergenic 55.0%
GAGTGCAACGAACCAAGCTC+CGG - chr8_1:87217914-87217933 Msa1222830:intron 55.0%
CTCAGCCAAGGCAGAAGGTT+AGG - chr8_1:87217952-87217971 Msa1222830:intron 55.0%
CTTGCCCTAACCTTCTGCCT+TGG + chr8_1:87217960-87217979 None:intergenic 55.0%
CAAGGCAGAAGGTTAGGGCA+AGG - chr8_1:87217958-87217977 Msa1222830:intron 55.0%
CAGAAGGTTAGGGCAAGGAG+AGG - chr8_1:87217963-87217982 Msa1222830:intron 55.0%
GCGTAGGCCCTCCCAAATAA+GGG + chr8_1:87218188-87218207 None:intergenic 55.0%
GTCATCTATTGCGGGACGGA+GGG + chr8_1:87218495-87218514 None:intergenic 55.0%
AGTCATCTATTGCGGGACGG+AGG + chr8_1:87218496-87218515 None:intergenic 55.0%
GTGCCGGGAGGATAGTCATT+TGG - chr8_1:87219267-87219286 Msa1222830:intron 55.0%
GACAGACAAGGCTTCCATGC+TGG - chr8_1:87219902-87219921 Msa1222830:intron 55.0%
ATGAGCAGATTAGGGGGAGC+AGG - chr8_1:87220201-87220220 Msa1222830:intron 55.0%
TGAGCAGATTAGGGGGAGCA+GGG - chr8_1:87220202-87220221 Msa1222830:intron 55.0%
TGTGGCTGATATGTCCTCCG+AGG - chr8_1:87220239-87220258 Msa1222830:intron 55.0%
GCCACGTGTCTCGGCTTAAT+TGG - chr8_1:87220762-87220781 Msa1222830:intron 55.0%
TGTGCTACACGCGCCGTATT+TGG + chr8_1:87220789-87220808 None:intergenic 55.0%
GAATGATTGGGGACGCGTGT+TGG - chr8_1:87220862-87220881 Msa1222830:intron 55.0%
GTCCAAACAAACGGCAACGG+AGG - chr8_1:87221590-87221609 Msa1222830:CDS 55.0%
CCAAACAAACGGCAACGGAG+GGG - chr8_1:87221592-87221611 Msa1222830:CDS 55.0%
!!! CCGTTTTAGGGTTTCGTGGG+TGG + chr8_1:87221619-87221638 None:intergenic 55.0%
!!! GACGCCGTTTTAGGGTTTCG+TGG + chr8_1:87221623-87221642 None:intergenic 55.0%
!! TGGAGGACGACGCCGTTTTA+GGG + chr8_1:87221631-87221650 None:intergenic 55.0%
!! TTGGAGGACGACGCCGTTTT+AGG + chr8_1:87221632-87221651 None:intergenic 55.0%
CATGGTGAGGCTTTCGTTGG+AGG + chr8_1:87221648-87221667 None:intergenic 55.0%
CGTCATGGTGAGGCTTTCGT+TGG + chr8_1:87221651-87221670 None:intergenic 55.0%
CTTGATGCTCCGTCATGGTG+AGG + chr8_1:87221661-87221680 None:intergenic 55.0%
! CACCATGACGGAGCATCAAG+TGG - chr8_1:87221661-87221680 Msa1222830:intron 55.0%
TGGCCCATCACCGTTAGATG+CGG + chr8_1:87221858-87221877 None:intergenic 55.0%
! GTTAACGGACATTCCGGGAG+AGG + chr8_1:87221882-87221901 None:intergenic 55.0%
CGGCGTCTACGACTTAGAAG+CGG + chr8_1:87221927-87221946 None:intergenic 55.0%
!! GGGTCGAGAGTGTTCCAGGA+AGG + chr8_1:87217356-87217375 None:intergenic 60.0%
! GAGAAGCATAAGAGCGGCGG+CGG + chr8_1:87217501-87217520 None:intergenic 60.0%
GTGGAGGAGACCTCCGGAAT+CGG + chr8_1:87217528-87217547 None:intergenic 60.0%
AGGCATGTGGAGGAGACCTC+CGG + chr8_1:87217534-87217553 None:intergenic 60.0%
ACCTTCTGCCTTGGCTGAGC+CGG + chr8_1:87217951-87217970 None:intergenic 60.0%
TTCGGCGATGCTGTGTGGGT+CGG + chr8_1:87217997-87218016 None:intergenic 60.0%
ACCCACACAGCATCGCCGAA+AGG - chr8_1:87217997-87218016 Msa1222830:intron 60.0%
CCCTTTCGGCGATGCTGTGT+GGG + chr8_1:87218001-87218020 None:intergenic 60.0%
CCCACACAGCATCGCCGAAA+GGG - chr8_1:87217998-87218017 Msa1222830:intron 60.0%
ACCCTTTCGGCGATGCTGTG+TGG + chr8_1:87218002-87218021 None:intergenic 60.0%
GGCGTAGGCCCTCCCAAATA+AGG + chr8_1:87218189-87218208 None:intergenic 60.0%
AGGTACACCTTGTGCCGTGC+CGG - chr8_1:87219251-87219270 Msa1222830:intron 60.0%
GAGCAGATTAGGGGGAGCAG+GGG - chr8_1:87220203-87220222 Msa1222830:intron 60.0%
AGGGGCTGTAGCTCCTCTTG+TGG - chr8_1:87220221-87220240 Msa1222830:intron 60.0%
GTGTAGCACACGCGCAGACA+GGG - chr8_1:87220799-87220818 Msa1222830:intron 60.0%
GCAGTCACTGACACCCTGCA+AGG + chr8_1:87221570-87221589 None:intergenic 60.0%
! CCCCTCCGTTGCCGTTTGTT+TGG + chr8_1:87221595-87221614 None:intergenic 60.0%
GGCCACTTGATGCTCCGTCA+TGG + chr8_1:87221666-87221685 None:intergenic 60.0%
CTACTGCCACGTGTCACACC+AGG - chr8_1:87221777-87221796 Msa1222830:CDS 60.0%
AGGGTTCCTGGTGTGACACG+TGG + chr8_1:87221786-87221805 None:intergenic 60.0%
ACGGACATTCCGGGAGAGGA+TGG + chr8_1:87221878-87221897 None:intergenic 60.0%
GGTGCGTGCGTGTGTGTGTG+TGG + chr8_1:87217144-87217163 None:intergenic 65.0%
!! CTTCTCACCGCCGATTCCGG+AGG - chr8_1:87217515-87217534 Msa1222830:CDS 65.0%
GAGGAGACCTCCGGAATCGG+CGG + chr8_1:87217525-87217544 None:intergenic 65.0%
ACGAACCAAGCTCCGGCGAG+TGG - chr8_1:87217921-87217940 Msa1222830:intron 65.0%
TCCGGCTCAGCCAAGGCAGA+AGG - chr8_1:87217947-87217966 Msa1222830:intron 65.0%
GGTACACCTTGTGCCGTGCC+GGG - chr8_1:87219252-87219271 Msa1222830:intron 65.0%
TATCCTCCCGGCACGGCACA+AGG + chr8_1:87219261-87219280 None:intergenic 65.0%
GACACGTGGCAGATCCGGCA+GGG + chr8_1:87220752-87220771 None:intergenic 65.0%
AGACACGTGGCAGATCCGGC+AGG + chr8_1:87220753-87220772 None:intergenic 65.0%
GCCGGATCTGCCACGTGTCT+CGG - chr8_1:87220753-87220772 Msa1222830:intron 65.0%
GCCGAGACACGTGGCAGATC+CGG + chr8_1:87220757-87220776 None:intergenic 65.0%
CGTGTAGCACACGCGCAGAC+AGG - chr8_1:87220798-87220817 Msa1222830:intron 65.0%
ACAGGGCGCGTGAACAGCAG+AGG - chr8_1:87220816-87220835 Msa1222830:intron 65.0%
GGCGCGTGAACAGCAGAGGA+CGG - chr8_1:87220820-87220839 Msa1222830:intron 65.0%
!! GGTGATGGGCCATCCTCTCC+CGG - chr8_1:87221866-87221885 Msa1222830:CDS 65.0%
GAGCTCCACTCGCCGGAGCT+TGG + chr8_1:87217929-87217948 None:intergenic 70.0%
AGCTCCGGCGAGTGGAGCTC+CGG - chr8_1:87217929-87217948 Msa1222830:intron 70.0%
TGAGCCGGAGCTCCACTCGC+CGG + chr8_1:87217936-87217955 None:intergenic 70.0%
GTGGAGCTCCGGCTCAGCCA+AGG - chr8_1:87217940-87217959 Msa1222830:intron 70.0%
GGCGATGCTGTGTGGGTCGG+TGG + chr8_1:87217994-87218013 None:intergenic 70.0%
ACACCTTGTGCCGTGCCGGG+AGG - chr8_1:87219255-87219274 Msa1222830:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 87216921 87222403 87216921 ID=Msa1222830;Name=Msa1222830
chr8_1 mRNA 87216921 87222403 87216921 ID=Msa1222830-mRNA-1;Parent=Msa1222830;Name=Msa1222830-mRNA-1;_AED=0.12;_eAED=0.12;_QI=184|1|1|1|0.85|0.75|8|463|403
chr8_1 exon 87216921 87217749 87216921 ID=Msa1222830-mRNA-1:exon:31460;Parent=Msa1222830-mRNA-1
chr8_1 exon 87219064 87219132 87219064 ID=Msa1222830-mRNA-1:exon:31459;Parent=Msa1222830-mRNA-1
chr8_1 exon 87219356 87219421 87219356 ID=Msa1222830-mRNA-1:exon:31458;Parent=Msa1222830-mRNA-1
chr8_1 exon 87220937 87221002 87220937 ID=Msa1222830-mRNA-1:exon:31457;Parent=Msa1222830-mRNA-1
chr8_1 exon 87221305 87221436 87221305 ID=Msa1222830-mRNA-1:exon:31456;Parent=Msa1222830-mRNA-1
chr8_1 exon 87221539 87221631 87221539 ID=Msa1222830-mRNA-1:exon:31455;Parent=Msa1222830-mRNA-1
chr8_1 exon 87221726 87222274 87221726 ID=Msa1222830-mRNA-1:exon:31454;Parent=Msa1222830-mRNA-1
chr8_1 exon 87222349 87222403 87222349 ID=Msa1222830-mRNA-1:exon:31453;Parent=Msa1222830-mRNA-1
chr8_1 five_prime_UTR 87222349 87222403 87222349 ID=Msa1222830-mRNA-1:five_prime_utr;Parent=Msa1222830-mRNA-1
chr8_1 five_prime_UTR 87222146 87222274 87222146 ID=Msa1222830-mRNA-1:five_prime_utr;Parent=Msa1222830-mRNA-1
chr8_1 CDS 87221726 87222145 87221726 ID=Msa1222830-mRNA-1:cds;Parent=Msa1222830-mRNA-1
chr8_1 CDS 87221539 87221631 87221539 ID=Msa1222830-mRNA-1:cds;Parent=Msa1222830-mRNA-1
chr8_1 CDS 87221305 87221436 87221305 ID=Msa1222830-mRNA-1:cds;Parent=Msa1222830-mRNA-1
chr8_1 CDS 87220937 87221002 87220937 ID=Msa1222830-mRNA-1:cds;Parent=Msa1222830-mRNA-1
chr8_1 CDS 87219356 87219421 87219356 ID=Msa1222830-mRNA-1:cds;Parent=Msa1222830-mRNA-1
chr8_1 CDS 87219064 87219132 87219064 ID=Msa1222830-mRNA-1:cds;Parent=Msa1222830-mRNA-1
chr8_1 CDS 87217384 87217749 87217384 ID=Msa1222830-mRNA-1:cds;Parent=Msa1222830-mRNA-1
chr8_1 three_prime_UTR 87216921 87217383 87216921 ID=Msa1222830-mRNA-1:three_prime_utr;Parent=Msa1222830-mRNA-1
Gene Sequence

>Msa1222830

ATGCAGCCTTGTAGCAGAGAAATGCAATCTCTTAACTCTCTCTTCAACTCTTCTTCTTCTTCTTCTTCTGAAATTCCCATTCCTCTCCAAAATCAGATCCAAAACAATAACAACAACGACACATTCAACCATCACGACGATTTTCTCAAACAAATCCTCTCCACCAATCTTCCTCCTTCCTGGAACACTCTCGACCCTAACCATAACAAACCTTTATTATGGGACCCCAATTCCGATGAAAATGTCACTTTCCCTAATTACGATGAACAACACAACAATCTCGCCTCCAAGTTTCGTAACCACCAGATCACTGACAAAACCGCCGCCGCTCTTATGCTTCTCACCGCCGATTCCGGAGGTCTCCTCCACATGCCTGCTGACTTTGACTCCTCCCAGAACGAAGTCGTTAACACCTCCTCCGCTGCTGGTGACGCTTCCGTTCAAGCTCTCTTCAACGGTTTCTCCGGATCTCTCCATGGTGTCCCTCAACCTCATCATTTTCAACCTCCTCAGGGGCAGAGTTTTGGAAGTGGTTCCGTGAGTGCAACGAACCAAGCTCCGGCGAGTGGAGCTCCGGCTCAGCCAAGGCAGAAGGTTAGGGCAAGGAGAGGTCAAGCCACCGACCCACACAGCATCGCCGAAAGGTTACGGAGGGAAAGAATTGCTGAGAGGATGAAAGCTTTGCAGGAACTTGTTCCTAATGCAAACAAGACAGACAAGGCTTCCATGCTGGATGAGATCATCGATTATGTGAAGTTCCTACAAGTCCAAGTCAAAGTTTTGAGTATGAGCAGATTAGGGGGAGCAGGGGCTGTAGCTCCTCTTGTGGCTGATATGTCCTCCGAGGGTGTCAGTGACTGCGTCCAAACAAACGGCAACGGAGGGGTCCACCCACGAAACCCTAAAACGGCGTCGTCCTCCAACGAAAGCCTCACCATGACGGAGCATCAAGTGGCCAAACTGATGGAAGAAGACATGGGATCTGCCATGCAATACTTGCAAGGCAAAGGTCTTTGCCTCATGCCTATTTCTCTTGCCACTGCAATTTCTACTGCCACGTGTCACACCAGGAACCCTTTGATCAACGCTGCTAATAATAATATCAACGGTAGTTCTAACCCTATCACCGCATCTAACGGTGATGGGCCATCCTCTCCCGGAATGTCCGTTAACAGCATCGTCAAAGATGCTAACTCCGCTTCTAAGTCGTAG
Protein sequence

>Msa1222830

MQPCSREMQSLNSLFNSSSSSSSEIPIPLQNQIQNNNNNDTFNHHDDFLKQILSTNLPPSWNTLDPNHNKPLLWDPNSDENVTFPNYDEQHNNLASKFRNHQITDKTAAALMLLTADSGGLLHMPADFDSSQNEVVNTSSAAGDASVQALFNGFSGSLHGVPQPHHFQPPQGQSFGSGSVSATNQAPASGAPAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSMSRLGGAGAVAPLVADMSSEGVSDCVQTNGNGGVHPRNPKTASSSNESLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRNPLINAANNNINGSSNPITASNGDGPSSPGMSVNSIVKDANSASKS*