Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231300 | XP_003626982.1 | 97.851 | 698 | 13 | 2 | 1 | 698 | 1 | 696 | 0.0 | 1395 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231300 | sp|Q9C5H4|MTV1_ARATH | 57.828 | 709 | 256 | 18 | 1 | 698 | 1 | 677 | 0.0 | 733 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231300 | G7LFW2 | 97.851 | 698 | 13 | 2 | 1 | 698 | 1 | 696 | 0.0 | 1395 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0673120 | Msa1231300 | 0.802398 | 5.718914e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231300 | MtrunA17_Chr8g0340211 | 97.851 | 698 | 13 | 2 | 1 | 698 | 1 | 696 | 0.0 | 1395 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231300 | AT3G16270.2 | 57.828 | 709 | 256 | 18 | 1 | 698 | 1 | 677 | 0.0 | 733 |
| Msa1231300 | AT3G16270.1 | 57.828 | 709 | 256 | 18 | 1 | 698 | 1 | 677 | 0.0 | 733 |
| Msa1231300 | AT3G16270.3 | 57.828 | 709 | 256 | 18 | 1 | 698 | 1 | 677 | 0.0 | 733 |
Find 177 sgRNAs with CRISPR-Local
Find 438 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATACGTTTCTGCAAATT+AGG | 0.116137 | 8_2:+7407352 | Msa1231300:five_prime_UTR |
| CCTCTGGTTGACGATTTATT+TGG | 0.167397 | 8_2:+7410630 | Msa1231300:CDS |
| GTCAACGACCTTTGAAGATT+TGG | 0.269793 | 8_2:-7409378 | None:intergenic |
| GGACAGGTTCTTAGCCTTCT+AGG | 0.279374 | 8_2:+7410432 | Msa1231300:intron |
| GAATTGAATCGAATGAGATT+TGG | 0.280539 | 8_2:-7407291 | None:intergenic |
| GGAGTTTGAGATGTCAAATT+TGG | 0.282418 | 8_2:-7411308 | None:intergenic |
| TAAAGCTCCAATCTCCTATT+TGG | 0.284700 | 8_2:+7409712 | Msa1231300:CDS |
| AATTGAATCGAATGAGATTT+GGG | 0.296937 | 8_2:-7407290 | None:intergenic |
| TCTCAAATGGTTGGACCTAA+TGG | 0.305481 | 8_2:+7411257 | Msa1231300:CDS |
| AGTGAAAATCAAAGTAGTTT+TGG | 0.310626 | 8_2:+7409450 | Msa1231300:CDS |
| CTTGAATATGCACATGATTC+CGG | 0.315992 | 8_2:+7413487 | Msa1231300:CDS |
| GAATACGTTTCTGCAAATTA+GGG | 0.319573 | 8_2:+7407353 | Msa1231300:five_prime_UTR |
| GATCGATTTGCAAGAAATAA+TGG | 0.322567 | 8_2:+7407391 | Msa1231300:exon |
| TCCAAGCAAGGAAATCATAA+TGG | 0.329858 | 8_2:+7410864 | Msa1231300:CDS |
| TGATGCAATGGGAACTATAT+TGG | 0.330554 | 8_2:+7411160 | Msa1231300:CDS |
| GGTTCACAGGCTCAGCCAAT+TGG | 0.334925 | 8_2:+7411038 | Msa1231300:CDS |
| GGAGATATAAGTGGCTCTAT+TGG | 0.335872 | 8_2:+7410651 | Msa1231300:CDS |
| ATGATTTCCTTGCTTGGAAC+TGG | 0.339090 | 8_2:-7410859 | None:intergenic |
| GTCTAGTGGTTCTTGGAATC+AGG | 0.345818 | 8_2:+7409488 | Msa1231300:CDS |
| CCCATTGCATCATAATTAAG+AGG | 0.350166 | 8_2:-7411149 | None:intergenic |
| TGCAGACATGCCTGCCAAAT+AGG | 0.355653 | 8_2:-7409726 | None:intergenic |
| TGGGTCTGTTAGTGATTTAA+TGG | 0.356437 | 8_2:+7410884 | Msa1231300:CDS |
| GCACTGATGAACAAAATATA+GGG | 0.359194 | 8_2:+7410589 | Msa1231300:CDS |
| TTAAGAGGTTGAGTAGGATA+TGG | 0.362319 | 8_2:-7411134 | None:intergenic |
| CACCTTCACAAGATCTTAAC+AGG | 0.363333 | 8_2:+7409184 | Msa1231300:CDS |
| AATTTCTTCTAATTTGTAAA+CGG | 0.364963 | 8_2:-7407495 | None:intergenic |
| ATTTCTTCTAATTTGTAAAC+GGG | 0.365218 | 8_2:-7407494 | None:intergenic |
| AAATATGCGGTTGGAAAGTC+TGG | 0.367671 | 8_2:+7408976 | Msa1231300:CDS |
| AAATAGTAATAATAATTATA+AGG | 0.368364 | 8_2:+7409152 | Msa1231300:CDS |
| AGAACCAGTCTAGTGGTTCT+TGG | 0.373848 | 8_2:+7409481 | Msa1231300:CDS |
| TCTGAGGTCCATCATCATTC+AGG | 0.374505 | 8_2:-7413432 | None:intergenic |
| GGCTGCAAAGTTGGATGCTC+TGG | 0.375821 | 8_2:+7409668 | Msa1231300:CDS |
| TTCGCATGTTTCTATTGTTA+AGG | 0.377831 | 8_2:+7407535 | Msa1231300:CDS |
| TCTCTAATGAAGAATGAAAC+TGG | 0.379927 | 8_2:+7409336 | Msa1231300:CDS |
| GACAGTTGGTGATGATAAAC+AGG | 0.380827 | 8_2:+7410773 | Msa1231300:CDS |
| AATACTCTTGGCGGCATGTT+GGG | 0.385725 | 8_2:+7411017 | Msa1231300:CDS |
| TTCAAATGATAACAACATAA+TGG | 0.387934 | 8_2:+7410551 | Msa1231300:CDS |
| TGGCGGCATGTTGGGTTCAC+AGG | 0.399565 | 8_2:+7411025 | Msa1231300:CDS |
| ATTAGTGAGGTAGTTGGTAT+TGG | 0.403145 | 8_2:+7409267 | Msa1231300:CDS |
| ATAAAAGACTTGATATCTTC+AGG | 0.404076 | 8_2:-7409246 | None:intergenic |
| TGGCATCTCGGGAGGGTTGT+AGG | 0.404111 | 8_2:-7409626 | None:intergenic |
| TAAACCTGAAAATAAAGATT+CGG | 0.406954 | 8_2:-7410973 | None:intergenic |
| AGCACTGATGAACAAAATAT+AGG | 0.408757 | 8_2:+7410588 | Msa1231300:CDS |
| GGATTTACATTGAACCCAAT+TGG | 0.409176 | 8_2:-7411053 | None:intergenic |
| GGCTGTGCGGGAAACTGCTC+AGG | 0.411795 | 8_2:+7409101 | Msa1231300:CDS |
| CTGCATTTCTCTTCTGAACT+CGG | 0.411830 | 8_2:-7409001 | None:intergenic |
| CCCATTATGATTTCCTTGCT+TGG | 0.418127 | 8_2:-7410865 | None:intergenic |
| GTTCACAGGCTCAGCCAATT+GGG | 0.425331 | 8_2:+7411039 | Msa1231300:CDS |
| AAAAGAAGCTCTTCCACAAC+AGG | 0.426232 | 8_2:-7413463 | None:intergenic |
| TCTGAATTGATAGAACTGTT+TGG | 0.431918 | 8_2:-7410465 | None:intergenic |
| ATCATCCTTCTTTCTGAGGA+TGG | 0.445895 | 8_2:-7410198 | None:intergenic |
| CCAAGCAAGGAAATCATAAT+GGG | 0.448142 | 8_2:+7410865 | Msa1231300:CDS |
| TCTAACAGAGGCTGCAAAGT+TGG | 0.449187 | 8_2:+7409659 | Msa1231300:CDS |
| GAGAGGAACGATTTCGTGGC+AGG | 0.449373 | 8_2:-7407229 | None:intergenic |
| AACAGGCGGATACAAGGGTT+TGG | 0.449764 | 8_2:+7409201 | Msa1231300:CDS |
| ACCTCTTAATTATGATGCAA+TGG | 0.453339 | 8_2:+7411148 | Msa1231300:CDS |
| CTCGAGACAATTGTAACTTC+AGG | 0.454370 | 8_2:+7409594 | Msa1231300:CDS |
| GATTCAATTCAATCTTGAAT+CGG | 0.466505 | 8_2:+7407304 | Msa1231300:five_prime_UTR |
| AAAAGCTTGAATGGCATCTC+GGG | 0.469453 | 8_2:-7409637 | None:intergenic |
| TTGGCTGGTCTCCACCTAGA+AGG | 0.471651 | 8_2:-7410446 | None:intergenic |
| CTTGACAATAATACTCTTGG+CGG | 0.475734 | 8_2:+7411008 | Msa1231300:CDS |
| CTCTGTTAGAAAAGCTTGAA+TGG | 0.476972 | 8_2:-7409646 | None:intergenic |
| GAAGAGCGGTGGAATCATAC+TGG | 0.478890 | 8_2:+7407423 | Msa1231300:CDS |
| TTTGACATCATCCACACCTC+TGG | 0.479807 | 8_2:+7410614 | Msa1231300:CDS |
| TAATACTCTTGGCGGCATGT+TGG | 0.479849 | 8_2:+7411016 | Msa1231300:CDS |
| AAGGTCGTTGACTGTTGAAT+CGG | 0.482305 | 8_2:+7409389 | Msa1231300:CDS |
| CCTCTTAATTATGATGCAAT+GGG | 0.482946 | 8_2:+7411149 | Msa1231300:CDS |
| TGCACTAAACAAGGCTGTGC+GGG | 0.483438 | 8_2:+7409089 | Msa1231300:CDS |
| TGAATTGTTGATGATTGAGC+TGG | 0.484461 | 8_2:-7411330 | None:intergenic |
| GGGTCTGTTAGTGATTTAAT+GGG | 0.486835 | 8_2:+7410885 | Msa1231300:CDS |
| TCCCTTCGTCTTCGTACTTG+AGG | 0.490071 | 8_2:-7410931 | None:intergenic |
| AATTGATAGAACTGTTTGGC+TGG | 0.491488 | 8_2:-7410461 | None:intergenic |
| ATACCAGGCGGCATATTGTA+TGG | 0.491713 | 8_2:-7411098 | None:intergenic |
| AGATTAAGACTAGAGAAGAT+AGG | 0.492419 | 8_2:+7409568 | Msa1231300:CDS |
| GATCTTAACAGGCGGATACA+AGG | 0.492709 | 8_2:+7409195 | Msa1231300:CDS |
| TCAGAGAAAGCTGTAAAGAC+AGG | 0.496456 | 8_2:+7410483 | Msa1231300:CDS |
| AGATGGCGGTGTTTCTCAAA+TGG | 0.499065 | 8_2:+7411244 | Msa1231300:CDS |
| ACCCTTGACAATAATACTCT+TGG | 0.499310 | 8_2:+7411005 | Msa1231300:CDS |
| TTTGGGTTTAGACGACCGGC+GGG | 0.499778 | 8_2:-7413543 | None:intergenic |
| TGAAATGAGACATCAGCAAA+TGG | 0.501029 | 8_2:-7410705 | None:intergenic |
| ATGCCTGCCAAATAGGAGAT+TGG | 0.502337 | 8_2:-7409719 | None:intergenic |
| ATTCTCGGATTTGGCATCTC+CGG | 0.503954 | 8_2:-7413506 | None:intergenic |
| AATCTCTGAAGAATTTCCAC+TGG | 0.505372 | 8_2:-7409550 | None:intergenic |
| AATAAGATGGAAATTTCAAA+TGG | 0.506237 | 8_2:+7409522 | Msa1231300:CDS |
| TGATCATGAGAGTCGCAAGC+AGG | 0.507289 | 8_2:+7410797 | Msa1231300:CDS |
| GCTGAAATATGTCTGGCAAA+GGG | 0.507941 | 8_2:-7411286 | None:intergenic |
| GGCGGTGTTTCTCAAATGGT+TGG | 0.508431 | 8_2:+7411248 | Msa1231300:CDS |
| TAGCCAGTGTCTATCAAGTC+AGG | 0.509384 | 8_2:-7410528 | None:intergenic |
| GATTTATTTGGAGATATAAG+TGG | 0.515070 | 8_2:+7410642 | Msa1231300:CDS |
| GGCAAAGGGGAAGCTCCATT+AGG | 0.519655 | 8_2:-7411272 | None:intergenic |
| GAAAAGCTTGAATGGCATCT+CGG | 0.525926 | 8_2:-7409638 | None:intergenic |
| CGCCAAGAGTATTATTGTCA+AGG | 0.526766 | 8_2:-7411007 | None:intergenic |
| TGGGTTTAGACGACCGGCGG+GGG | 0.527769 | 8_2:-7413541 | None:intergenic |
| TTCATTTGGGTTTAGACGAC+CGG | 0.527776 | 8_2:-7413547 | None:intergenic |
| AAATTTGGCTGAAATATGTC+TGG | 0.528584 | 8_2:-7411293 | None:intergenic |
| GATCATCATCCTTCTTTCTG+AGG | 0.528830 | 8_2:-7410202 | None:intergenic |
| AGATTGATAAAATATGCGGT+TGG | 0.530364 | 8_2:+7408967 | Msa1231300:CDS |
| GGCTGAAATATGTCTGGCAA+AGG | 0.530719 | 8_2:-7411287 | None:intergenic |
| GCTCCAATCTCCTATTTGGC+AGG | 0.535438 | 8_2:+7409716 | Msa1231300:CDS |
| TGAGTCCATCCTCAGAAAGA+AGG | 0.535906 | 8_2:+7410193 | Msa1231300:CDS |
| ATGAAGAATGAAACTGGAAG+TGG | 0.537758 | 8_2:+7409342 | Msa1231300:CDS |
| GGCAGGGAAAATTATGATGA+AGG | 0.540448 | 8_2:-7407212 | None:intergenic |
| TTTAGTGCATCGCCTTTCAA+AGG | 0.540566 | 8_2:-7409075 | None:intergenic |
| ATTGCACCACAAGGGACAGT+TGG | 0.548112 | 8_2:+7409050 | Msa1231300:CDS |
| TGTTGACATTACTAATGTGT+TGG | 0.550466 | 8_2:-7411217 | None:intergenic |
| AAGTGAGAGGAACGATTTCG+TGG | 0.551867 | 8_2:-7407233 | None:intergenic |
| GACTTGATATCTTCAGGTGG+CGG | 0.554154 | 8_2:-7409240 | None:intergenic |
| ATGCCATACAATATGCCGCC+TGG | 0.556414 | 8_2:+7411095 | Msa1231300:CDS |
| TGGAAGAGAGAGAAAGTGAG+AGG | 0.561178 | 8_2:-7407246 | None:intergenic |
| GATTCCAAGAACCACTAGAC+TGG | 0.561611 | 8_2:-7409485 | None:intergenic |
| GAAATGAGACATCAGCAAAT+GGG | 0.563237 | 8_2:-7410704 | None:intergenic |
| ATCTTAACAGGCGGATACAA+GGG | 0.564539 | 8_2:+7409196 | Msa1231300:CDS |
| GGATTCAAGAGTAAATAAGA+TGG | 0.564585 | 8_2:+7409509 | Msa1231300:CDS |
| GGACAGTTGGATCCTTTGAA+AGG | 0.564722 | 8_2:+7409063 | Msa1231300:CDS |
| TTTGGTTCCAGTTCCAAGCA+AGG | 0.564848 | 8_2:+7410852 | Msa1231300:CDS |
| GATCATGAGAGTCGCAAGCA+GGG | 0.565241 | 8_2:+7410798 | Msa1231300:CDS |
| ATGATGGACCTGAATGATGA+TGG | 0.566289 | 8_2:+7413424 | Msa1231300:CDS |
| ATATGACCAGTGGGAAACAT+TGG | 0.572861 | 8_2:-7411074 | None:intergenic |
| TGTGCGGGAAACTGCTCAGG+AGG | 0.579718 | 8_2:+7409104 | Msa1231300:CDS |
| AGCTTGAATGGCATCTCGGG+AGG | 0.580876 | 8_2:-7409634 | None:intergenic |
| GAGTCCCATTGTAAAACAGA+AGG | 0.585693 | 8_2:+7407595 | Msa1231300:CDS |
| GAATTGTTGATGATTGAGCT+GGG | 0.590504 | 8_2:-7411329 | None:intergenic |
| TCAGAATGAACCTCCTGTTG+TGG | 0.594816 | 8_2:+7413450 | Msa1231300:CDS |
| ACAAGAGTCCAAATCTTCAA+AGG | 0.595366 | 8_2:+7409370 | Msa1231300:CDS |
| ACCTCAAGTACGAAGACGAA+GGG | 0.596712 | 8_2:+7410930 | Msa1231300:CDS |
| TTTAAGATTGATAAAATATG+CGG | 0.597911 | 8_2:+7408963 | Msa1231300:CDS |
| TCTGTTAGTGATTTAATGGG+TGG | 0.600236 | 8_2:+7410888 | Msa1231300:CDS |
| CTGAAATATGTCTGGCAAAG+GGG | 0.601936 | 8_2:-7411285 | None:intergenic |
| TAAATCGTCAACCAGAGGTG+TGG | 0.602699 | 8_2:-7410625 | None:intergenic |
| TCATAATTAAGAGGTTGAGT+AGG | 0.604442 | 8_2:-7411140 | None:intergenic |
| GCCAAGAGTATTATTGTCAA+GGG | 0.604765 | 8_2:-7411006 | None:intergenic |
| AGAGGAACGATTTCGTGGCA+GGG | 0.606290 | 8_2:-7407228 | None:intergenic |
| GTAAATCCAATGTTTCCCAC+TGG | 0.606772 | 8_2:+7411068 | Msa1231300:CDS |
| AGTAATGTCAACATGCGAGA+TGG | 0.606843 | 8_2:+7411227 | Msa1231300:CDS |
| ATTTCAAATGGTGAATCCAG+TGG | 0.608307 | 8_2:+7409534 | Msa1231300:CDS |
| GAAAGGCGATGCACTAAACA+AGG | 0.608586 | 8_2:+7409080 | Msa1231300:CDS |
| ACAACAGGAGGTTCATTCTG+AGG | 0.609033 | 8_2:-7413448 | None:intergenic |
| GGTTGATTCAACATAATACC+AGG | 0.609636 | 8_2:-7411113 | None:intergenic |
| CTTTCTAAGAACCAGTCTAG+TGG | 0.613318 | 8_2:+7409474 | Msa1231300:CDS |
| TTGTATGGCATATGACCAGT+GGG | 0.617159 | 8_2:-7411083 | None:intergenic |
| TGGAATCATACTGGAGATCA+CGG | 0.617937 | 8_2:+7407432 | Msa1231300:CDS |
| ATCTTGTGAAGGTGCAGCAG+CGG | 0.621853 | 8_2:-7409175 | None:intergenic |
| GGAAGTGCATCAATTAAGCA+AGG | 0.624631 | 8_2:+7409288 | Msa1231300:CDS |
| CAGAGAAAGCTGTAAAGACA+GGG | 0.628516 | 8_2:+7410484 | Msa1231300:CDS |
| GCAGCAGTTACTTGCTACAA+TGG | 0.629849 | 8_2:+7411187 | Msa1231300:CDS |
| CCAAATAAATCGTCAACCAG+AGG | 0.637590 | 8_2:-7410630 | None:intergenic |
| CTGCCTGACTTGATAGACAC+TGG | 0.638691 | 8_2:+7410525 | Msa1231300:CDS |
| GCTTGAATGGCATCTCGGGA+GGG | 0.644368 | 8_2:-7409633 | None:intergenic |
| TCGTCAATTATTGCACCACA+AGG | 0.644502 | 8_2:+7409041 | Msa1231300:CDS |
| AGAAGCTCTTCCACAACAGG+AGG | 0.644847 | 8_2:-7413460 | None:intergenic |
| TACCTCAAGTACGAAGACGA+AGG | 0.645385 | 8_2:+7410929 | Msa1231300:CDS |
| GCTGATGTCTCATTTCACAC+AGG | 0.646204 | 8_2:+7410711 | Msa1231300:CDS |
| ATCATGAGAGTCGCAAGCAG+GGG | 0.647507 | 8_2:+7410799 | Msa1231300:CDS |
| AATGTCAACATGCGAGATGG+CGG | 0.648206 | 8_2:+7411230 | Msa1231300:CDS |
| ATTGTATGGCATATGACCAG+TGG | 0.653406 | 8_2:-7411084 | None:intergenic |
| CGCCTGTTAAGATCTTGTGA+AGG | 0.653424 | 8_2:-7409186 | None:intergenic |
| GAGACAATTGTAACTTCAGG+AGG | 0.657326 | 8_2:+7409597 | Msa1231300:CDS |
| AGGCAGTTCAGCAACAGTAG+CGG | 0.658668 | 8_2:-7410508 | None:intergenic |
| CTTCACTGAAAACAAAGACG+TGG | 0.668625 | 8_2:+7410247 | Msa1231300:CDS |
| TCAACTCTTAACTACTGACG+TGG | 0.671498 | 8_2:+7407179 | Msa1231300:five_prime_UTR |
| TTGACTGTTGAATCGGAACG+TGG | 0.672852 | 8_2:+7409396 | Msa1231300:CDS |
| GGAAACGAGTAGAAGAGCGG+TGG | 0.673452 | 8_2:+7407412 | Msa1231300:CDS |
| ATGCACTAAACAAGGCTGTG+CGG | 0.674037 | 8_2:+7409088 | Msa1231300:CDS |
| AGGCGAGAGCAAAGAACATG+CGG | 0.677706 | 8_2:+7410731 | Msa1231300:CDS |
| AAGGATCCAACTGTCCCTTG+TGG | 0.677764 | 8_2:-7409056 | None:intergenic |
| CGTCAATTATTGCACCACAA+GGG | 0.678468 | 8_2:+7409042 | Msa1231300:CDS |
| AGAAATGCAGAGACATTCAG+TGG | 0.683795 | 8_2:+7409014 | Msa1231300:CDS |
| ATTTGGGTTTAGACGACCGG+CGG | 0.684788 | 8_2:-7413544 | None:intergenic |
| AAAGACTTGATATCTTCAGG+TGG | 0.688757 | 8_2:-7409243 | None:intergenic |
| CAGGTTCTTAGCCTTCTAGG+TGG | 0.691209 | 8_2:+7410435 | Msa1231300:intron |
| TAAAGATTCGGATTGCACTG+TGG | 0.702259 | 8_2:-7410961 | None:intergenic |
| CTTCACAAGATCTTAACAGG+CGG | 0.704225 | 8_2:+7409187 | Msa1231300:CDS |
| GGACTTCATAGCTTAACACA+AGG | 0.714787 | 8_2:+7409309 | Msa1231300:CDS |
| AATGGAAACGAGTAGAAGAG+CGG | 0.735214 | 8_2:+7407409 | Msa1231300:exon |
| ACTGTTGAATCGGAACGTGG+TGG | 0.741763 | 8_2:+7409399 | Msa1231300:CDS |
| TGATTCAACATAATACCAGG+CGG | 0.751300 | 8_2:-7411110 | None:intergenic |
| ACAGTTGGTGATGATAAACA+GGG | 0.818749 | 8_2:+7410774 | Msa1231300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATAATTTTATTTTTAT+TGG | + | chr8_2:7412503-7412522 | Msa1231300:intron | 0.0% |
| !!! | ATGTATTATACTTTTTTTTT+TGG | + | chr8_2:7407832-7407851 | Msa1231300:intron | 10.0% |
| !!! | AATAACTAAATTTACATTTT+GGG | + | chr8_2:7410103-7410122 | Msa1231300:intron | 10.0% |
| !!! | AATTTCTTCTAATTTGTAAA+CGG | - | chr8_2:7407498-7407517 | None:intergenic | 15.0% |
| !!! | TATTATACTTTTTTTTTTGG+TGG | + | chr8_2:7407835-7407854 | Msa1231300:intron | 15.0% |
| !!! | ATTATACTTTTTTTTTTGGT+GGG | + | chr8_2:7407836-7407855 | Msa1231300:intron | 15.0% |
| !! | AATTTAATTCAAACTTCAAA+CGG | - | chr8_2:7408542-7408561 | None:intergenic | 15.0% |
| !! | AATTTAATTCAAACTTCAAA+CGG | - | chr8_2:7408542-7408561 | None:intergenic | 15.0% |
| !! | AATTTAATTCAAACTTCAAA+CGG | - | chr8_2:7408542-7408561 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTGAAAATATTGT+TGG | + | chr8_2:7408935-7408954 | Msa1231300:intron | 15.0% |
| !!! | TTTAAGATTGATAAAATATG+CGG | + | chr8_2:7408963-7408982 | Msa1231300:CDS | 15.0% |
| !!! | CAATAACTAAATTTACATTT+TGG | + | chr8_2:7410102-7410121 | Msa1231300:intron | 15.0% |
| !! | TTAATAAGTTGCAAATATTA+GGG | - | chr8_2:7411533-7411552 | None:intergenic | 15.0% |
| !! | ATTAATAAGTTGCAAATATT+AGG | - | chr8_2:7411534-7411553 | None:intergenic | 15.0% |
| !!! | GTATTTTGGTAAAAAAAATA+GGG | - | chr8_2:7412784-7412803 | None:intergenic | 15.0% |
| !!! | ATTAGGGTTTTTTAATTTGT+TGG | + | chr8_2:7407369-7407388 | Msa1231300:five_prime_UTR | 20.0% |
| !!! | ATTTCTTCTAATTTGTAAAC+GGG | - | chr8_2:7407497-7407516 | None:intergenic | 20.0% |
| !! | AGAAAAAGAACAAAAAAAAC+CGG | - | chr8_2:7407634-7407653 | None:intergenic | 20.0% |
| !! | TGTGAAATTATTAGTAGTAT+CGG | + | chr8_2:7407732-7407751 | Msa1231300:intron | 20.0% |
| !! | TAATATTGAATTAGATGCAT+AGG | + | chr8_2:7407756-7407775 | Msa1231300:intron | 20.0% |
| !!! | TATCTTGAATGATTTTTTCT+TGG | + | chr8_2:7407925-7407944 | Msa1231300:intron | 20.0% |
| !!! | ATCTTGAATGATTTTTTCTT+GGG | + | chr8_2:7407926-7407945 | Msa1231300:intron | 20.0% |
| !! | CAAAAATAAGTTTCTACATT+TGG | - | chr8_2:7407990-7408009 | None:intergenic | 20.0% |
| !!! | CAAATGTAGAAACTTATTTT+TGG | + | chr8_2:7407988-7408007 | Msa1231300:intron | 20.0% |
| !!! | TATTATACTATTGTTGTTCA+TGG | + | chr8_2:7408185-7408204 | Msa1231300:intron | 20.0% |
| !! | AGAAAGTAAAAGAATCAAAA+AGG | - | chr8_2:7408235-7408254 | None:intergenic | 20.0% |
| !! | TTCTTTACTATTATATTCAG+AGG | + | chr8_2:7408251-7408270 | Msa1231300:intron | 20.0% |
| !! | ATTTAATTCAAACTTCAAAC+GGG | - | chr8_2:7408541-7408560 | None:intergenic | 20.0% |
| !! | ATTTAATTCAAACTTCAAAC+AGG | - | chr8_2:7408541-7408560 | None:intergenic | 20.0% |
| !! | ATTTAATTCAAACTTCAAAC+GGG | - | chr8_2:7408541-7408560 | None:intergenic | 20.0% |
| !! | ATTTAATTCAAACTTCAAAC+GGG | - | chr8_2:7408541-7408560 | None:intergenic | 20.0% |
| !!! | CTTGATAACAAATATAAGTA+TGG | - | chr8_2:7408802-7408821 | None:intergenic | 20.0% |
| !! | TTGATATGATTTACGAATAA+AGG | + | chr8_2:7408840-7408859 | Msa1231300:intron | 20.0% |
| !! | TGATATGATTTACGAATAAA+GGG | + | chr8_2:7408841-7408860 | Msa1231300:intron | 20.0% |
| !! | ATCAATCTGTAATACAATTT+CGG | - | chr8_2:7408885-7408904 | None:intergenic | 20.0% |
| !! | AATAAGATGGAAATTTCAAA+TGG | + | chr8_2:7409522-7409541 | Msa1231300:CDS | 20.0% |
| !! | ATATTATATTCCAGAATACT+TGG | - | chr8_2:7409868-7409887 | None:intergenic | 20.0% |
| !!! | AAGTATTCTGGAATATAATA+TGG | + | chr8_2:7409867-7409886 | Msa1231300:intron | 20.0% |
| !! | TTCAAATGATAACAACATAA+TGG | + | chr8_2:7410551-7410570 | Msa1231300:CDS | 20.0% |
| !! | TAAACCTGAAAATAAAGATT+CGG | - | chr8_2:7410976-7410995 | None:intergenic | 20.0% |
| !!! | TAAAGCATTTGATTTTATCT+CGG | + | chr8_2:7411370-7411389 | Msa1231300:CDS | 20.0% |
| !! | GATACTCGATAAAATAATAA+AGG | + | chr8_2:7411617-7411636 | Msa1231300:intron | 20.0% |
| !! | TAAAACAGAGATTTATATCA+TGG | - | chr8_2:7412462-7412481 | None:intergenic | 20.0% |
| !!! | GGTATTTTGGTAAAAAAAAT+AGG | - | chr8_2:7412785-7412804 | None:intergenic | 20.0% |
| !!! | GAATATATTTTCCAGATAAA+GGG | - | chr8_2:7412806-7412825 | None:intergenic | 20.0% |
| !! | TTTATCTGGAAAATATATTC+CGG | + | chr8_2:7412806-7412825 | Msa1231300:intron | 20.0% |
| !! | AATGAGATTTGGGAATTTTT+GGG | - | chr8_2:7407283-7407302 | None:intergenic | 25.0% |
| ! | AATTGAATCGAATGAGATTT+GGG | - | chr8_2:7407293-7407312 | None:intergenic | 25.0% |
| ! | GATTCAATTCAATCTTGAAT+CGG | + | chr8_2:7407304-7407323 | Msa1231300:five_prime_UTR | 25.0% |
| !!! | TGATTTTGTTTTGAAACGAT+TGG | + | chr8_2:7407565-7407584 | Msa1231300:CDS | 25.0% |
| !! | TATACCTTCTGTTTTACAAT+GGG | - | chr8_2:7407602-7407621 | None:intergenic | 25.0% |
| !! | TTATACCTTCTGTTTTACAA+TGG | - | chr8_2:7407603-7407622 | None:intergenic | 25.0% |
| !! | AGAAGGTATAATCAAAATTC+CGG | + | chr8_2:7407612-7407631 | Msa1231300:intron | 25.0% |
| !!! | GGTTTTTTTTGTTCTTTTTC+TGG | + | chr8_2:7407633-7407652 | Msa1231300:intron | 25.0% |
| ! | ATGTAGATCTTATTCTTATC+TGG | + | chr8_2:7407687-7407706 | Msa1231300:intron | 25.0% |
| ! | TGTAGATCTTATTCTTATCT+GGG | + | chr8_2:7407688-7407707 | Msa1231300:intron | 25.0% |
| ! | GTGAAATTATTAGTAGTATC+GGG | + | chr8_2:7407733-7407752 | Msa1231300:intron | 25.0% |
| !!! | TTTTTGGAATCAACTTTATG+AGG | + | chr8_2:7407808-7407827 | Msa1231300:intron | 25.0% |
| ! | ATCATATCATATTTGATCCA+AGG | + | chr8_2:7408406-7408425 | Msa1231300:intron | 25.0% |
| ! | TCATATCATATTTGATCCAA+GGG | + | chr8_2:7408407-7408426 | Msa1231300:intron | 25.0% |
| ! | ATTTGCATAGTTAATTGCAA+TGG | + | chr8_2:7408570-7408589 | Msa1231300:intron | 25.0% |
| ! | ATAAAAGACTTGATATCTTC+AGG | - | chr8_2:7409249-7409268 | None:intergenic | 25.0% |
| !! | TATCAAGTCTTTTATTAGTG+AGG | + | chr8_2:7409254-7409273 | Msa1231300:CDS | 25.0% |
| !! | AGTGAAAATCAAAGTAGTTT+TGG | + | chr8_2:7409450-7409469 | Msa1231300:CDS | 25.0% |
| ! | GGAGAAAAAAAATTAATCTG+CGG | - | chr8_2:7409847-7409866 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCTCCAAGTATTC+TGG | + | chr8_2:7409855-7409874 | Msa1231300:intron | 25.0% |
| !!! | TATTCTGGAATATAATATGG+TGG | + | chr8_2:7409870-7409889 | Msa1231300:intron | 25.0% |
| !! | AATGTTTTCATACCAGAAAA+GGG | - | chr8_2:7409908-7409927 | None:intergenic | 25.0% |
| !! | AAATGTTTTCATACCAGAAA+AGG | - | chr8_2:7409909-7409928 | None:intergenic | 25.0% |
| ! | TTTGAGAGAAAAAGCTATAA+AGG | + | chr8_2:7410301-7410320 | Msa1231300:CDS | 25.0% |
| ! | GATTTATTTGGAGATATAAG+TGG | + | chr8_2:7410642-7410661 | Msa1231300:CDS | 25.0% |
| !!! | ATCATTTTTCAATTCATGAC+TGG | - | chr8_2:7410679-7410698 | None:intergenic | 25.0% |
| ! | CCACATTCTTCTTAATAATT+TGG | - | chr8_2:7411574-7411593 | None:intergenic | 25.0% |
| ! | CCAAATTATTAAGAAGAATG+TGG | + | chr8_2:7411571-7411590 | Msa1231300:intron | 25.0% |
| !!! | GTTTTATTACGTTGTTAACA+TGG | - | chr8_2:7411962-7411981 | None:intergenic | 25.0% |
| ! | TAATAAAACGAGAAACACTT+CGG | + | chr8_2:7411973-7411992 | Msa1231300:intron | 25.0% |
| ! | TATGTGTCATAGATTATAGA+TGG | + | chr8_2:7412310-7412329 | Msa1231300:intron | 25.0% |
| ! | TCATATTTAATGTCTCGAAT+TGG | - | chr8_2:7412638-7412657 | None:intergenic | 25.0% |
| !! | GGAATATATTTTCCAGATAA+AGG | - | chr8_2:7412807-7412826 | None:intergenic | 25.0% |
| ! | AATATATTCCGGACAATATT+CGG | + | chr8_2:7412817-7412836 | Msa1231300:intron | 25.0% |
| !! | TTTTGCATTGTTTTCAGTTA+TGG | + | chr8_2:7413377-7413396 | Msa1231300:intron | 25.0% |
| !! | ATTTTTGGGGAAGAAAGAAT+TGG | - | chr8_2:7407269-7407288 | None:intergenic | 30.0% |
| ! | ATGAGATTTGGGAATTTTTG+GGG | - | chr8_2:7407282-7407301 | None:intergenic | 30.0% |
| ! | GAATGAGATTTGGGAATTTT+TGG | - | chr8_2:7407284-7407303 | None:intergenic | 30.0% |
| GAATTGAATCGAATGAGATT+TGG | - | chr8_2:7407294-7407313 | None:intergenic | 30.0% | |
| TGAATACGTTTCTGCAAATT+AGG | + | chr8_2:7407352-7407371 | Msa1231300:five_prime_UTR | 30.0% | |
| GAATACGTTTCTGCAAATTA+GGG | + | chr8_2:7407353-7407372 | Msa1231300:five_prime_UTR | 30.0% | |
| !! | GATCGATTTGCAAGAAATAA+TGG | + | chr8_2:7407391-7407410 | Msa1231300:exon | 30.0% |
| ! | TTCGCATGTTTCTATTGTTA+AGG | + | chr8_2:7407535-7407554 | Msa1231300:CDS | 30.0% |
| TATTGAATTAGATGCATAGG+TGG | + | chr8_2:7407759-7407778 | Msa1231300:intron | 30.0% | |
| !!! | ATGCAGTGGTTTTGAATTTT+TGG | + | chr8_2:7407792-7407811 | Msa1231300:intron | 30.0% |
| ! | CTGATTGGTACAATTTTTGT+CGG | - | chr8_2:7407891-7407910 | None:intergenic | 30.0% |
| TGTGCATTCAATATCTTGAA+AGG | + | chr8_2:7408015-7408034 | Msa1231300:intron | 30.0% | |
| !!! | TAACATGACCCTTTTTTCTT+TGG | + | chr8_2:7408119-7408138 | Msa1231300:intron | 30.0% |
| !!! | ACAACTTTGTTTTCTACGAT+TGG | + | chr8_2:7408357-7408376 | Msa1231300:intron | 30.0% |
| TCAAATTGAGGCAAATTGTA+TGG | - | chr8_2:7408479-7408498 | None:intergenic | 30.0% | |
| TCCAAGATATCATCAAATTG+AGG | - | chr8_2:7408491-7408510 | None:intergenic | 30.0% | |
| ATTTGCATAGTTCATTGCAA+TGG | + | chr8_2:7408632-7408651 | Msa1231300:intron | 30.0% | |
| ATTTGCATAGTTCATTGCAT+TGG | + | chr8_2:7408694-7408713 | Msa1231300:intron | 30.0% | |
| ATTTGCATAGTTCATTGCAT+TGG | + | chr8_2:7408694-7408713 | Msa1231300:intron | 30.0% | |
| !! | TTGCATTGGTTGTAAATCTA+AGG | + | chr8_2:7408771-7408790 | Msa1231300:intron | 30.0% |
| TGTTATCAAGCAGTAATGTT+TGG | + | chr8_2:7408812-7408831 | Msa1231300:intron | 30.0% | |
| TTACGAATAAAGGGTCTTAA+TGG | + | chr8_2:7408850-7408869 | Msa1231300:intron | 30.0% | |
| ! | ATAAAGGGTCTTAATGGTTT+TGG | + | chr8_2:7408856-7408875 | Msa1231300:intron | 30.0% |
| TTGTTGAAAATATTGTTGGC+AGG | + | chr8_2:7408939-7408958 | Msa1231300:intron | 30.0% | |
| AGATTGATAAAATATGCGGT+TGG | + | chr8_2:7408967-7408986 | Msa1231300:CDS | 30.0% | |
| !! | ACTATTTTCTTCTGAGAAGA+TGG | - | chr8_2:7409139-7409158 | None:intergenic | 30.0% |
| ! | TCTTTTATTAGTGAGGTAGT+TGG | + | chr8_2:7409261-7409280 | Msa1231300:CDS | 30.0% |
| TCTCTAATGAAGAATGAAAC+TGG | + | chr8_2:7409336-7409355 | Msa1231300:CDS | 30.0% | |
| GGATTCAAGAGTAAATAAGA+TGG | + | chr8_2:7409509-7409528 | Msa1231300:CDS | 30.0% | |
| AGATTAAGACTAGAGAAGAT+AGG | + | chr8_2:7409568-7409587 | Msa1231300:CDS | 30.0% | |
| TGCACTTGCTTATTTAATTG+AGG | + | chr8_2:7409812-7409831 | Msa1231300:intron | 30.0% | |
| ACATTGTCAATATGCATTTG+AGG | - | chr8_2:7409935-7409954 | None:intergenic | 30.0% | |
| ! | CTATTGAGAGTTATGTTTTC+AGG | + | chr8_2:7410145-7410164 | Msa1231300:intron | 30.0% |
| !! | TGATGATCATTTTTCACATG+TGG | + | chr8_2:7410217-7410236 | Msa1231300:CDS | 30.0% |
| !! | TATAGCTTTTTCTCTCAAAG+AGG | - | chr8_2:7410300-7410319 | None:intergenic | 30.0% |
| ATTCATCCAGATTGACTATA+AGG | - | chr8_2:7410330-7410349 | None:intergenic | 30.0% | |
| TTTAACACTTGACCTTCTAA+TGG | + | chr8_2:7410411-7410430 | Msa1231300:intron | 30.0% | |
| TCTGAATTGATAGAACTGTT+TGG | - | chr8_2:7410468-7410487 | None:intergenic | 30.0% | |
| !! | AGCACTGATGAACAAAATAT+AGG | + | chr8_2:7410588-7410607 | Msa1231300:CDS | 30.0% |
| ! | GCACTGATGAACAAAATATA+GGG | + | chr8_2:7410589-7410608 | Msa1231300:CDS | 30.0% |
| CCAAATAGATCAAAAAGTTG+AGG | - | chr8_2:7410837-7410856 | None:intergenic | 30.0% | |
| ! | CCTCAACTTTTTGATCTATT+TGG | + | chr8_2:7410834-7410853 | Msa1231300:CDS | 30.0% |
| !!! | CAATCCGAATCTTTATTTTC+AGG | + | chr8_2:7410969-7410988 | Msa1231300:CDS | 30.0% |
| TCATAATTAAGAGGTTGAGT+AGG | - | chr8_2:7411143-7411162 | None:intergenic | 30.0% | |
| ACCTCTTAATTATGATGCAA+TGG | + | chr8_2:7411148-7411167 | Msa1231300:CDS | 30.0% | |
| CCTCTTAATTATGATGCAAT+GGG | + | chr8_2:7411149-7411168 | Msa1231300:CDS | 30.0% | |
| TGTTGACATTACTAATGTGT+TGG | - | chr8_2:7411220-7411239 | None:intergenic | 30.0% | |
| AAATTTGGCTGAAATATGTC+TGG | - | chr8_2:7411296-7411315 | None:intergenic | 30.0% | |
| TTAGGGTTACAATATAACAC+TGG | - | chr8_2:7411516-7411535 | None:intergenic | 30.0% | |
| !! | AAGAGATGAATGAAGTGTTT+TGG | + | chr8_2:7411679-7411698 | Msa1231300:intron | 30.0% |
| !! | AGAGATGAATGAAGTGTTTT+GGG | + | chr8_2:7411680-7411699 | Msa1231300:intron | 30.0% |
| ! | TAGATTTTGTGCTTTTGTTG+AGG | + | chr8_2:7411874-7411893 | Msa1231300:intron | 30.0% |
| ! | GCTTTTGTTGAGGATATTTA+AGG | + | chr8_2:7411884-7411903 | Msa1231300:intron | 30.0% |
| TGGAGACAAATACAAAGAAA+AGG | - | chr8_2:7412241-7412260 | None:intergenic | 30.0% | |
| !!! | AACTACACTAAGGCTTTTTT+TGG | - | chr8_2:7412280-7412299 | None:intergenic | 30.0% |
| ATACTAATGCTAGTTAGACT+TGG | - | chr8_2:7412716-7412735 | None:intergenic | 30.0% | |
| TTACCAAAATACCCTTTATC+TGG | + | chr8_2:7412792-7412811 | Msa1231300:intron | 30.0% | |
| !!! | TTTCCAGATAAAGGGTATTT+TGG | - | chr8_2:7412798-7412817 | None:intergenic | 30.0% |
| TATACATTCCGAATATTGTC+CGG | - | chr8_2:7412828-7412847 | None:intergenic | 30.0% | |
| ! | AAAAAGTAGACGTCTTTTTC+CGG | + | chr8_2:7412998-7413017 | Msa1231300:intron | 30.0% |
| ! | TTTTTCCGGAATATGTAATC+CGG | + | chr8_2:7413012-7413031 | Msa1231300:intron | 30.0% |
| CTATATATAACCTAGCTATC+CGG | - | chr8_2:7413034-7413053 | None:intergenic | 30.0% | |
| ! | CTCTAAAAAACACTCCATTT+GGG | + | chr8_2:7413107-7413126 | Msa1231300:intron | 30.0% |
| ! | ATGATGTTAACACCCTTTTA+TGG | - | chr8_2:7413162-7413181 | None:intergenic | 30.0% |
| !!! | TTTTTTGGTGGGAAAGTGTT+TGG | + | chr8_2:7407847-7407866 | Msa1231300:intron | 35.0% |
| CGACAAAAATTGTACCAATC+AGG | + | chr8_2:7407889-7407908 | Msa1231300:intron | 35.0% | |
| !! | AATGTTAACTTGTGCCCTTA+AGG | + | chr8_2:7407950-7407969 | Msa1231300:intron | 35.0% |
| CTTCTAAACTTGTGCCTTAA+GGG | - | chr8_2:7407967-7407986 | None:intergenic | 35.0% | |
| GAGTTCCACCAAAGAAAAAA+GGG | - | chr8_2:7408130-7408149 | None:intergenic | 35.0% | |
| TGAGTTCCACCAAAGAAAAA+AGG | - | chr8_2:7408131-7408150 | None:intergenic | 35.0% | |
| GTAGAAAACAAAGTTGTGCA+TGG | - | chr8_2:7408354-7408373 | None:intergenic | 35.0% | |
| CTACGATTGGATCAATAAGT+CGG | + | chr8_2:7408370-7408389 | Msa1231300:intron | 35.0% | |
| TATCATATTTGATCCAAGGG+TGG | + | chr8_2:7408410-7408429 | Msa1231300:intron | 35.0% | |
| ! | GCCTCAATTTGATGATATCT+TGG | + | chr8_2:7408487-7408506 | Msa1231300:intron | 35.0% |
| TATCAAGCAGTAATGTTTGG+AGG | + | chr8_2:7408815-7408834 | Msa1231300:intron | 35.0% | |
| AAAGACTTGATATCTTCAGG+TGG | - | chr8_2:7409246-7409265 | None:intergenic | 35.0% | |
| ! | ATTAGTGAGGTAGTTGGTAT+TGG | + | chr8_2:7409267-7409286 | Msa1231300:CDS | 35.0% |
| ATGAAGAATGAAACTGGAAG+TGG | + | chr8_2:7409342-7409361 | Msa1231300:CDS | 35.0% | |
| ACAAGAGTCCAAATCTTCAA+AGG | + | chr8_2:7409370-7409389 | Msa1231300:CDS | 35.0% | |
| ! | TTTTCACTACGATATGCAAC+TGG | - | chr8_2:7409438-7409457 | None:intergenic | 35.0% |
| ATTTCAAATGGTGAATCCAG+TGG | + | chr8_2:7409534-7409553 | Msa1231300:CDS | 35.0% | |
| ! | AATCTCTGAAGAATTTCCAC+TGG | - | chr8_2:7409553-7409572 | None:intergenic | 35.0% |
| CTCTGTTAGAAAAGCTTGAA+TGG | - | chr8_2:7409649-7409668 | None:intergenic | 35.0% | |
| ! | CATTCAAGCTTTTCTAACAG+AGG | + | chr8_2:7409647-7409666 | Msa1231300:CDS | 35.0% |
| TAAAGCTCCAATCTCCTATT+TGG | + | chr8_2:7409712-7409731 | Msa1231300:CDS | 35.0% | |
| ! | AACTTTACATGACCCTTTTC+TGG | + | chr8_2:7409893-7409912 | Msa1231300:intron | 35.0% |
| GTATGTTCAGAGAGACATTT+AGG | - | chr8_2:7409997-7410016 | None:intergenic | 35.0% | |
| CAAGTGAATACCATGCATAA+TGG | + | chr8_2:7410016-7410035 | Msa1231300:intron | 35.0% | |
| !! | TACCATGCATAATGGATTGT+TGG | + | chr8_2:7410024-7410043 | Msa1231300:intron | 35.0% |
| AACCAACAATCCATTATGCA+TGG | - | chr8_2:7410029-7410048 | None:intergenic | 35.0% | |
| ! | TTTTTCTCTCAAAGAGGCTT+GGG | - | chr8_2:7410294-7410313 | None:intergenic | 35.0% |
| AGGTAACCTTATAGTCAATC+TGG | + | chr8_2:7410321-7410340 | Msa1231300:intron | 35.0% | |
| AATTGATAGAACTGTTTGGC+TGG | - | chr8_2:7410464-7410483 | None:intergenic | 35.0% | |
| GAAATGAGACATCAGCAAAT+GGG | - | chr8_2:7410707-7410726 | None:intergenic | 35.0% | |
| TGAAATGAGACATCAGCAAA+TGG | - | chr8_2:7410708-7410727 | None:intergenic | 35.0% | |
| ! | ATGCGGATGATCTATTTTCA+GGG | + | chr8_2:7410748-7410767 | Msa1231300:CDS | 35.0% |
| !! | ACAGTTGGTGATGATAAACA+GGG | + | chr8_2:7410774-7410793 | Msa1231300:CDS | 35.0% |
| TCCAAGCAAGGAAATCATAA+TGG | + | chr8_2:7410864-7410883 | Msa1231300:CDS | 35.0% | |
| CCAAGCAAGGAAATCATAAT+GGG | + | chr8_2:7410865-7410884 | Msa1231300:CDS | 35.0% | |
| TGGGTCTGTTAGTGATTTAA+TGG | + | chr8_2:7410884-7410903 | Msa1231300:CDS | 35.0% | |
| GGGTCTGTTAGTGATTTAAT+GGG | + | chr8_2:7410885-7410904 | Msa1231300:CDS | 35.0% | |
| TCTGTTAGTGATTTAATGGG+TGG | + | chr8_2:7410888-7410907 | Msa1231300:CDS | 35.0% | |
| ACCCTTGACAATAATACTCT+TGG | + | chr8_2:7411005-7411024 | Msa1231300:CDS | 35.0% | |
| !! | GCCAAGAGTATTATTGTCAA+GGG | - | chr8_2:7411009-7411028 | None:intergenic | 35.0% |
| CTTGACAATAATACTCTTGG+CGG | + | chr8_2:7411008-7411027 | Msa1231300:CDS | 35.0% | |
| GGATTTACATTGAACCCAAT+TGG | - | chr8_2:7411056-7411075 | None:intergenic | 35.0% | |
| TGATTCAACATAATACCAGG+CGG | - | chr8_2:7411113-7411132 | None:intergenic | 35.0% | |
| ! | GGTTGATTCAACATAATACC+AGG | - | chr8_2:7411116-7411135 | None:intergenic | 35.0% |
| TTAAGAGGTTGAGTAGGATA+TGG | - | chr8_2:7411137-7411156 | None:intergenic | 35.0% | |
| CCCATTGCATCATAATTAAG+AGG | - | chr8_2:7411152-7411171 | None:intergenic | 35.0% | |
| ! | GGAGTTTGAGATGTCAAATT+TGG | - | chr8_2:7411311-7411330 | None:intergenic | 35.0% |
| !! | GAATTGTTGATGATTGAGCT+GGG | - | chr8_2:7411332-7411351 | None:intergenic | 35.0% |
| !! | TGAATTGTTGATGATTGAGC+TGG | - | chr8_2:7411333-7411352 | None:intergenic | 35.0% |
| ! | ATTTTATCTCGGTAAGTTCG+TGG | + | chr8_2:7411381-7411400 | Msa1231300:intron | 35.0% |
| !! | TGATGTGTTGATGACTCATT+TGG | + | chr8_2:7411715-7411734 | Msa1231300:intron | 35.0% |
| ! | TCACTTTGTTTCATGCTTGT+AGG | + | chr8_2:7411806-7411825 | Msa1231300:intron | 35.0% |
| !! | TATTTAAGGTGTTGCAGTGT+TGG | + | chr8_2:7411898-7411917 | Msa1231300:intron | 35.0% |
| ! | TTGCAGTTCTCAATGTTTTC+TGG | + | chr8_2:7412014-7412033 | Msa1231300:intron | 35.0% |
| AGGAATACTCAATCAATTGC+AGG | - | chr8_2:7412221-7412240 | None:intergenic | 35.0% | |
| CTAGTTAGACTTGGCAAAAT+GGG | - | chr8_2:7412707-7412726 | None:intergenic | 35.0% | |
| ! | AAGACAGGGTGATTTTCAAA+CGG | - | chr8_2:7412858-7412877 | None:intergenic | 35.0% |
| TGGTCAGTTGAAATACAATC+CGG | + | chr8_2:7412902-7412921 | Msa1231300:intron | 35.0% | |
| TATGTCTGCAGTATGTTATC+CGG | - | chr8_2:7412924-7412943 | None:intergenic | 35.0% | |
| AATATGTAATCCGGATAGCT+AGG | + | chr8_2:7413021-7413040 | Msa1231300:intron | 35.0% | |
| !!! | GTAGGGAGTGTTTTTGATAA+AGG | - | chr8_2:7413085-7413104 | None:intergenic | 35.0% |
| !!! | GAGTGTTTTTTAGAGGTGTA+GGG | - | chr8_2:7413102-7413121 | None:intergenic | 35.0% |
| !!! | CCAAATGGAGTGTTTTTTAG+AGG | - | chr8_2:7413109-7413128 | None:intergenic | 35.0% |
| ! | CCTCTAAAAAACACTCCATT+TGG | + | chr8_2:7413106-7413125 | Msa1231300:intron | 35.0% |
| ! | TCATTTTCGTCTGAATGCAA+AGG | + | chr8_2:7413181-7413200 | Msa1231300:intron | 35.0% |
| AATCGCCTAAAAATCGACTA+GGG | - | chr8_2:7413227-7413246 | None:intergenic | 35.0% | |
| TAATCGCCTAAAAATCGACT+AGG | - | chr8_2:7413228-7413247 | None:intergenic | 35.0% | |
| TGATCTTCACTGTACTTATC+CGG | + | chr8_2:7413266-7413285 | Msa1231300:intron | 35.0% | |
| ! | GCATTCCGGATAACATTTTT+CGG | + | chr8_2:7413314-7413333 | Msa1231300:intron | 35.0% |
| CTTGAATATGCACATGATTC+CGG | + | chr8_2:7413487-7413506 | Msa1231300:CDS | 35.0% | |
| TCAACTCTTAACTACTGACG+TGG | + | chr8_2:7407179-7407198 | Msa1231300:five_prime_UTR | 40.0% | |
| GGCAGGGAAAATTATGATGA+AGG | - | chr8_2:7407215-7407234 | None:intergenic | 40.0% | |
| AATGGAAACGAGTAGAAGAG+CGG | + | chr8_2:7407409-7407428 | Msa1231300:exon | 40.0% | |
| TGGAATCATACTGGAGATCA+CGG | + | chr8_2:7407432-7407451 | Msa1231300:CDS | 40.0% | |
| GAGTCCCATTGTAAAACAGA+AGG | + | chr8_2:7407595-7407614 | Msa1231300:CDS | 40.0% | |
| GTACCAATCAGGAATGAACT+CGG | + | chr8_2:7407900-7407919 | Msa1231300:intron | 40.0% | |
| TACCAATCAGGAATGAACTC+GGG | + | chr8_2:7407901-7407920 | Msa1231300:intron | 40.0% | |
| GCTTCTAAACTTGTGCCTTA+AGG | - | chr8_2:7407968-7407987 | None:intergenic | 40.0% | |
| !! | ATCCTTAACTTGTGCCCTAA+GGG | + | chr8_2:7408089-7408108 | Msa1231300:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTTA+GGG | - | chr8_2:7408106-7408125 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+AGG | - | chr8_2:7408107-7408126 | None:intergenic | 40.0% |
| !!! | CATGACCCTTTTTTCTTTGG+TGG | + | chr8_2:7408122-7408141 | Msa1231300:intron | 40.0% |
| TGGAACTCATTAACAAGTCG+AGG | + | chr8_2:7408142-7408161 | Msa1231300:intron | 40.0% | |
| GGAACTCATTAACAAGTCGA+GGG | + | chr8_2:7408143-7408162 | Msa1231300:intron | 40.0% | |
| AAATATGCGGTTGGAAAGTC+TGG | + | chr8_2:7408976-7408995 | Msa1231300:CDS | 40.0% | |
| CTGCATTTCTCTTCTGAACT+CGG | - | chr8_2:7409004-7409023 | None:intergenic | 40.0% | |
| AGAAATGCAGAGACATTCAG+TGG | + | chr8_2:7409014-7409033 | Msa1231300:CDS | 40.0% | |
| TCGTCAATTATTGCACCACA+AGG | + | chr8_2:7409041-7409060 | Msa1231300:CDS | 40.0% | |
| CGTCAATTATTGCACCACAA+GGG | + | chr8_2:7409042-7409061 | Msa1231300:CDS | 40.0% | |
| TTTAGTGCATCGCCTTTCAA+AGG | - | chr8_2:7409078-7409097 | None:intergenic | 40.0% | |
| CACCTTCACAAGATCTTAAC+AGG | + | chr8_2:7409184-7409203 | Msa1231300:CDS | 40.0% | |
| CTTCACAAGATCTTAACAGG+CGG | + | chr8_2:7409187-7409206 | Msa1231300:CDS | 40.0% | |
| ATCTTAACAGGCGGATACAA+GGG | + | chr8_2:7409196-7409215 | Msa1231300:CDS | 40.0% | |
| ! | GGAAGTGCATCAATTAAGCA+AGG | + | chr8_2:7409288-7409307 | Msa1231300:CDS | 40.0% |
| GGACTTCATAGCTTAACACA+AGG | + | chr8_2:7409309-7409328 | Msa1231300:CDS | 40.0% | |
| ! | GTCAACGACCTTTGAAGATT+TGG | - | chr8_2:7409381-7409400 | None:intergenic | 40.0% |
| ! | AAGGTCGTTGACTGTTGAAT+CGG | + | chr8_2:7409389-7409408 | Msa1231300:CDS | 40.0% |
| ! | CTTTCTAAGAACCAGTCTAG+TGG | + | chr8_2:7409474-7409493 | Msa1231300:CDS | 40.0% |
| CTCGAGACAATTGTAACTTC+AGG | + | chr8_2:7409594-7409613 | Msa1231300:CDS | 40.0% | |
| GAGACAATTGTAACTTCAGG+AGG | + | chr8_2:7409597-7409616 | Msa1231300:CDS | 40.0% | |
| AAAAGCTTGAATGGCATCTC+GGG | - | chr8_2:7409640-7409659 | None:intergenic | 40.0% | |
| GAAAAGCTTGAATGGCATCT+CGG | - | chr8_2:7409641-7409660 | None:intergenic | 40.0% | |
| ! | TTCAGAGAGACATTTAGGAC+GGG | - | chr8_2:7409992-7410011 | None:intergenic | 40.0% |
| GTTCAGAGAGACATTTAGGA+CGG | - | chr8_2:7409993-7410012 | None:intergenic | 40.0% | |
| ! | ATCATCCTTCTTTCTGAGGA+TGG | - | chr8_2:7410201-7410220 | None:intergenic | 40.0% |
| GATCATCATCCTTCTTTCTG+AGG | - | chr8_2:7410205-7410224 | None:intergenic | 40.0% | |
| CTTCACTGAAAACAAAGACG+TGG | + | chr8_2:7410247-7410266 | Msa1231300:CDS | 40.0% | |
| ! | TTTTCTCTCAAAGAGGCTTG+GGG | - | chr8_2:7410293-7410312 | None:intergenic | 40.0% |
| ! | CTTTTTCTCTCAAAGAGGCT+TGG | - | chr8_2:7410295-7410314 | None:intergenic | 40.0% |
| CTAAGAACCTGTCCATTAGA+AGG | - | chr8_2:7410426-7410445 | None:intergenic | 40.0% | |
| TCAGAGAAAGCTGTAAAGAC+AGG | + | chr8_2:7410483-7410502 | Msa1231300:CDS | 40.0% | |
| CAGAGAAAGCTGTAAAGACA+GGG | + | chr8_2:7410484-7410503 | Msa1231300:CDS | 40.0% | |
| CCAAATAAATCGTCAACCAG+AGG | - | chr8_2:7410633-7410652 | None:intergenic | 40.0% | |
| CCTCTGGTTGACGATTTATT+TGG | + | chr8_2:7410630-7410649 | Msa1231300:CDS | 40.0% | |
| ! | GGAGATATAAGTGGCTCTAT+TGG | + | chr8_2:7410651-7410670 | Msa1231300:CDS | 40.0% |
| ! | CATGCGGATGATCTATTTTC+AGG | + | chr8_2:7410747-7410766 | Msa1231300:CDS | 40.0% |
| !! | CTATTTTCAGGGATGACAGT+TGG | + | chr8_2:7410759-7410778 | Msa1231300:CDS | 40.0% |
| !! | GACAGTTGGTGATGATAAAC+AGG | + | chr8_2:7410773-7410792 | Msa1231300:CDS | 40.0% |
| ATGATTTCCTTGCTTGGAAC+TGG | - | chr8_2:7410862-7410881 | None:intergenic | 40.0% | |
| CCCATTATGATTTCCTTGCT+TGG | - | chr8_2:7410868-7410887 | None:intergenic | 40.0% | |
| TAAAGATTCGGATTGCACTG+TGG | - | chr8_2:7410964-7410983 | None:intergenic | 40.0% | |
| !! | CGCCAAGAGTATTATTGTCA+AGG | - | chr8_2:7411010-7411029 | None:intergenic | 40.0% |
| GTAAATCCAATGTTTCCCAC+TGG | + | chr8_2:7411068-7411087 | Msa1231300:CDS | 40.0% | |
| ATATGACCAGTGGGAAACAT+TGG | - | chr8_2:7411077-7411096 | None:intergenic | 40.0% | |
| TTGTATGGCATATGACCAGT+GGG | - | chr8_2:7411086-7411105 | None:intergenic | 40.0% | |
| ATTGTATGGCATATGACCAG+TGG | - | chr8_2:7411087-7411106 | None:intergenic | 40.0% | |
| AGTAATGTCAACATGCGAGA+TGG | + | chr8_2:7411227-7411246 | Msa1231300:CDS | 40.0% | |
| TCTCAAATGGTTGGACCTAA+TGG | + | chr8_2:7411257-7411276 | Msa1231300:CDS | 40.0% | |
| CTGAAATATGTCTGGCAAAG+GGG | - | chr8_2:7411288-7411307 | None:intergenic | 40.0% | |
| GCTGAAATATGTCTGGCAAA+GGG | - | chr8_2:7411289-7411308 | None:intergenic | 40.0% | |
| !! | GAAGCCTTATTCCACTAAGT+GGG | + | chr8_2:7411466-7411485 | Msa1231300:intron | 40.0% |
| !! | AAGCCTTATTCCACTAAGTG+GGG | + | chr8_2:7411467-7411486 | Msa1231300:intron | 40.0% |
| !! | GATGAATGAAGTGTTTTGGG+TGG | + | chr8_2:7411683-7411702 | Msa1231300:intron | 40.0% |
| GTCATCAACACATCAGTTTC+AGG | - | chr8_2:7411710-7411729 | None:intergenic | 40.0% | |
| TTATGCAACTGTCTAGCTGT+CGG | + | chr8_2:7411763-7411782 | Msa1231300:intron | 40.0% | |
| ATTTGTCTCCATTGCATGTG+TGG | + | chr8_2:7412250-7412269 | Msa1231300:intron | 40.0% | |
| AGCATGAAGCAACTACACTA+AGG | - | chr8_2:7412290-7412309 | None:intergenic | 40.0% | |
| GCTAGTTAGACTTGGCAAAA+TGG | - | chr8_2:7412708-7412727 | None:intergenic | 40.0% | |
| !! | GTATTACTTTTCCCACCCTA+TGG | + | chr8_2:7412746-7412765 | Msa1231300:intron | 40.0% |
| ! | AGGGTGATTTTCAAACGGTA+CGG | - | chr8_2:7412853-7412872 | None:intergenic | 40.0% |
| CAGACATAAGAGCTGTATTC+CGG | + | chr8_2:7412936-7412955 | Msa1231300:intron | 40.0% | |
| GCTATCCGGATTACATATTC+CGG | - | chr8_2:7413020-7413039 | None:intergenic | 40.0% | |
| !!! | GGGAGTGTTTTTGATAAAGG+TGG | - | chr8_2:7413082-7413101 | None:intergenic | 40.0% |
| !!! | GGAGTGTTTTTTAGAGGTGT+AGG | - | chr8_2:7413103-7413122 | None:intergenic | 40.0% |
| AAACCAAGATTTCGCCCAAA+TGG | - | chr8_2:7413124-7413143 | None:intergenic | 40.0% | |
| ATTTGGGCGAAATCTTGGTT+TGG | + | chr8_2:7413123-7413142 | Msa1231300:intron | 40.0% | |
| CCTAAAAATCGACTAGGGAA+AGG | - | chr8_2:7413222-7413241 | None:intergenic | 40.0% | |
| !! | CCTTTCCCTAGTCGATTTTT+AGG | + | chr8_2:7413219-7413238 | Msa1231300:intron | 40.0% |
| GGTGTCCGAAAAATGTTATC+CGG | - | chr8_2:7413322-7413341 | None:intergenic | 40.0% | |
| ATTCAGGTCCATCATCATCT+GGG | - | chr8_2:7413419-7413438 | None:intergenic | 40.0% | |
| !! | ATGATGGACCTGAATGATGA+TGG | + | chr8_2:7413424-7413443 | Msa1231300:CDS | 40.0% |
| AAAAGAAGCTCTTCCACAAC+AGG | - | chr8_2:7413466-7413485 | None:intergenic | 40.0% | |
| AAGTGAGAGGAACGATTTCG+TGG | - | chr8_2:7407236-7407255 | None:intergenic | 45.0% | |
| TGGAAGAGAGAGAAAGTGAG+AGG | - | chr8_2:7407249-7407268 | None:intergenic | 45.0% | |
| GTGGAATGAAAGAGATGCAG+TGG | + | chr8_2:7407778-7407797 | Msa1231300:intron | 45.0% | |
| !! | TGGGAAAGTGTTTGGTCAAG+AGG | + | chr8_2:7407855-7407874 | Msa1231300:intron | 45.0% |
| AACCCGAGTTCATTCCTGAT+TGG | - | chr8_2:7407906-7407925 | None:intergenic | 45.0% | |
| !! | GATCCTTAACTTGTGCCCTA+AGG | + | chr8_2:7408088-7408107 | Msa1231300:intron | 45.0% |
| TCAGAGGTTCACAAGATGTG+TGG | + | chr8_2:7408267-7408286 | Msa1231300:intron | 45.0% | |
| !!! | CACAAGCTTTTTTCCACCCT+TGG | - | chr8_2:7408426-7408445 | None:intergenic | 45.0% |
| GGTGGAAAAAAGCTTGTGCA+TGG | + | chr8_2:7408428-7408447 | Msa1231300:intron | 45.0% | |
| CTTCAAACGGGTGCTCTTAT+AGG | - | chr8_2:7408529-7408548 | None:intergenic | 45.0% | |
| GGACAGTTGGATCCTTTGAA+AGG | + | chr8_2:7409063-7409082 | Msa1231300:CDS | 45.0% | |
| GAAAGGCGATGCACTAAACA+AGG | + | chr8_2:7409080-7409099 | Msa1231300:CDS | 45.0% | |
| ATGCACTAAACAAGGCTGTG+CGG | + | chr8_2:7409088-7409107 | Msa1231300:CDS | 45.0% | |
| CGCCTGTTAAGATCTTGTGA+AGG | - | chr8_2:7409189-7409208 | None:intergenic | 45.0% | |
| GATCTTAACAGGCGGATACA+AGG | + | chr8_2:7409195-7409214 | Msa1231300:CDS | 45.0% | |
| GACTTGATATCTTCAGGTGG+CGG | - | chr8_2:7409243-7409262 | None:intergenic | 45.0% | |
| TTGACTGTTGAATCGGAACG+TGG | + | chr8_2:7409396-7409415 | Msa1231300:CDS | 45.0% | |
| AGAACCAGTCTAGTGGTTCT+TGG | + | chr8_2:7409481-7409500 | Msa1231300:CDS | 45.0% | |
| GATTCCAAGAACCACTAGAC+TGG | - | chr8_2:7409488-7409507 | None:intergenic | 45.0% | |
| GTCTAGTGGTTCTTGGAATC+AGG | + | chr8_2:7409488-7409507 | Msa1231300:CDS | 45.0% | |
| TCTAACAGAGGCTGCAAAGT+TGG | + | chr8_2:7409659-7409678 | Msa1231300:CDS | 45.0% | |
| ATGCCTGCCAAATAGGAGAT+TGG | - | chr8_2:7409722-7409741 | None:intergenic | 45.0% | |
| ! | TCAGAGAGACATTTAGGACG+GGG | - | chr8_2:7409991-7410010 | None:intergenic | 45.0% |
| TGAGTCCATCCTCAGAAAGA+AGG | + | chr8_2:7410193-7410212 | Msa1231300:CDS | 45.0% | |
| ! | CACTTGACCTTCTAATGGAC+AGG | + | chr8_2:7410416-7410435 | Msa1231300:intron | 45.0% |
| TAGCCAGTGTCTATCAAGTC+AGG | - | chr8_2:7410531-7410550 | None:intergenic | 45.0% | |
| TTTGACATCATCCACACCTC+TGG | + | chr8_2:7410614-7410633 | Msa1231300:CDS | 45.0% | |
| TAAATCGTCAACCAGAGGTG+TGG | - | chr8_2:7410628-7410647 | None:intergenic | 45.0% | |
| GCTGATGTCTCATTTCACAC+AGG | + | chr8_2:7410711-7410730 | Msa1231300:CDS | 45.0% | |
| ! | TTTGGTTCCAGTTCCAAGCA+AGG | + | chr8_2:7410852-7410871 | Msa1231300:CDS | 45.0% |
| TACCTCAAGTACGAAGACGA+AGG | + | chr8_2:7410929-7410948 | Msa1231300:CDS | 45.0% | |
| ACCTCAAGTACGAAGACGAA+GGG | + | chr8_2:7410930-7410949 | Msa1231300:CDS | 45.0% | |
| TAATACTCTTGGCGGCATGT+TGG | + | chr8_2:7411016-7411035 | Msa1231300:CDS | 45.0% | |
| AATACTCTTGGCGGCATGTT+GGG | + | chr8_2:7411017-7411036 | Msa1231300:CDS | 45.0% | |
| ATACCAGGCGGCATATTGTA+TGG | - | chr8_2:7411101-7411120 | None:intergenic | 45.0% | |
| ! | GCAGCAGTTACTTGCTACAA+TGG | + | chr8_2:7411187-7411206 | Msa1231300:CDS | 45.0% |
| AATGTCAACATGCGAGATGG+CGG | + | chr8_2:7411230-7411249 | Msa1231300:CDS | 45.0% | |
| ! | AGATGGCGGTGTTTCTCAAA+TGG | + | chr8_2:7411244-7411263 | Msa1231300:CDS | 45.0% |
| GGCTGAAATATGTCTGGCAA+AGG | - | chr8_2:7411290-7411309 | None:intergenic | 45.0% | |
| !! | CGAAGCCTTATTCCACTAAG+TGG | + | chr8_2:7411465-7411484 | Msa1231300:intron | 45.0% |
| CTTATTCCACTAAGTGGGGT+CGG | + | chr8_2:7411471-7411490 | Msa1231300:intron | 45.0% | |
| GGAAATGCTACTAATGCTCC+CGG | + | chr8_2:7411638-7411657 | Msa1231300:intron | 45.0% | |
| GAAATGCTACTAATGCTCCC+GGG | + | chr8_2:7411639-7411658 | Msa1231300:intron | 45.0% | |
| AAATGCTACTAATGCTCCCG+GGG | + | chr8_2:7411640-7411659 | Msa1231300:intron | 45.0% | |
| !!! | TTTTAGCTCAACTAGTGCCC+CGG | - | chr8_2:7411660-7411679 | None:intergenic | 45.0% |
| TATGCAACTGTCTAGCTGTC+GGG | + | chr8_2:7411764-7411783 | Msa1231300:intron | 45.0% | |
| AACGAGAAACACTTCGGACA+TGG | + | chr8_2:7411979-7411998 | Msa1231300:intron | 45.0% | |
| ! | TTGGTCTTCCACACATGCAA+TGG | - | chr8_2:7412261-7412280 | None:intergenic | 45.0% |
| GAAAATCACCCTGTCTTGTG+AGG | + | chr8_2:7412861-7412880 | Msa1231300:intron | 45.0% | |
| TTGTGAGGACTTGCGAAACT+TGG | + | chr8_2:7412876-7412895 | Msa1231300:intron | 45.0% | |
| TGTGAGGACTTGCGAAACTT+GGG | + | chr8_2:7412877-7412896 | Msa1231300:intron | 45.0% | |
| !! | TCCCGCTCGTTTTGAATACA+GGG | - | chr8_2:7412979-7412998 | None:intergenic | 45.0% |
| !! | TTCCCGCTCGTTTTGAATAC+AGG | - | chr8_2:7412980-7412999 | None:intergenic | 45.0% |
| ACTCCATTTGGGCGAAATCT+TGG | + | chr8_2:7413118-7413137 | Msa1231300:intron | 45.0% | |
| AGGAGCAATCTGGCCATAAA+AGG | + | chr8_2:7413146-7413165 | Msa1231300:intron | 45.0% | |
| GGAGCAATCTGGCCATAAAA+GGG | + | chr8_2:7413147-7413166 | Msa1231300:intron | 45.0% | |
| CTTATCCGGAACACGTAATC+CGG | + | chr8_2:7413280-7413299 | Msa1231300:intron | 45.0% | |
| TTCAGGTCCATCATCATCTG+GGG | - | chr8_2:7413418-7413437 | None:intergenic | 45.0% | |
| CATTCAGGTCCATCATCATC+TGG | - | chr8_2:7413420-7413439 | None:intergenic | 45.0% | |
| ! | TCTGAGGTCCATCATCATTC+AGG | - | chr8_2:7413435-7413454 | None:intergenic | 45.0% |
| ACAACAGGAGGTTCATTCTG+AGG | - | chr8_2:7413451-7413470 | None:intergenic | 45.0% | |
| TCAGAATGAACCTCCTGTTG+TGG | + | chr8_2:7413450-7413469 | Msa1231300:CDS | 45.0% | |
| ATTCTCGGATTTGGCATCTC+CGG | - | chr8_2:7413509-7413528 | None:intergenic | 45.0% | |
| !! | AAATAGTAATAATAATTATA+AGG | + | chr8_2:7409152-7409171 | Msa1231300:CDS | 5.0% |
| !! | ATAAAATTATAAATAAATGT+AGG | - | chr8_2:7412497-7412516 | None:intergenic | 5.0% |
| AGAGGAACGATTTCGTGGCA+GGG | - | chr8_2:7407231-7407250 | None:intergenic | 50.0% | |
| GAAGAGCGGTGGAATCATAC+TGG | + | chr8_2:7407423-7407442 | Msa1231300:CDS | 50.0% | |
| TGCCCTTAGGGCACAAGTTA+AGG | - | chr8_2:7408094-7408113 | None:intergenic | 50.0% | |
| ACAAGTCGAGGGCAATCACT+TGG | + | chr8_2:7408154-7408173 | Msa1231300:intron | 50.0% | |
| ATTGCACCACAAGGGACAGT+TGG | + | chr8_2:7409050-7409069 | Msa1231300:CDS | 50.0% | |
| AAGGATCCAACTGTCCCTTG+TGG | - | chr8_2:7409059-7409078 | None:intergenic | 50.0% | |
| TGCACTAAACAAGGCTGTGC+GGG | + | chr8_2:7409089-7409108 | Msa1231300:CDS | 50.0% | |
| ! | ATCTTGTGAAGGTGCAGCAG+CGG | - | chr8_2:7409178-7409197 | None:intergenic | 50.0% |
| AACAGGCGGATACAAGGGTT+TGG | + | chr8_2:7409201-7409220 | Msa1231300:CDS | 50.0% | |
| ACTGTTGAATCGGAACGTGG+TGG | + | chr8_2:7409399-7409418 | Msa1231300:CDS | 50.0% | |
| GCTCCAATCTCCTATTTGGC+AGG | + | chr8_2:7409716-7409735 | Msa1231300:CDS | 50.0% | |
| TGCAGACATGCCTGCCAAAT+AGG | - | chr8_2:7409729-7409748 | None:intergenic | 50.0% | |
| ! | GGACAGGTTCTTAGCCTTCT+AGG | + | chr8_2:7410432-7410451 | Msa1231300:intron | 50.0% |
| ! | CAGGTTCTTAGCCTTCTAGG+TGG | + | chr8_2:7410435-7410454 | Msa1231300:intron | 50.0% |
| AGGCAGTTCAGCAACAGTAG+CGG | - | chr8_2:7410511-7410530 | None:intergenic | 50.0% | |
| ! | CTGCCTGACTTGATAGACAC+TGG | + | chr8_2:7410525-7410544 | Msa1231300:CDS | 50.0% |
| AGGCGAGAGCAAAGAACATG+CGG | + | chr8_2:7410731-7410750 | Msa1231300:CDS | 50.0% | |
| TGATCATGAGAGTCGCAAGC+AGG | + | chr8_2:7410797-7410816 | Msa1231300:CDS | 50.0% | |
| GATCATGAGAGTCGCAAGCA+GGG | + | chr8_2:7410798-7410817 | Msa1231300:CDS | 50.0% | |
| ATCATGAGAGTCGCAAGCAG+GGG | + | chr8_2:7410799-7410818 | Msa1231300:CDS | 50.0% | |
| TCCCTTCGTCTTCGTACTTG+AGG | - | chr8_2:7410934-7410953 | None:intergenic | 50.0% | |
| GTTCACAGGCTCAGCCAATT+GGG | + | chr8_2:7411039-7411058 | Msa1231300:CDS | 50.0% | |
| ATGCCATACAATATGCCGCC+TGG | + | chr8_2:7411095-7411114 | Msa1231300:CDS | 50.0% | |
| GGCGGTGTTTCTCAAATGGT+TGG | + | chr8_2:7411248-7411267 | Msa1231300:CDS | 50.0% | |
| CGACCCCACTTAGTGGAATA+AGG | - | chr8_2:7411473-7411492 | None:intergenic | 50.0% | |
| ! | TTTAGCTCAACTAGTGCCCC+GGG | - | chr8_2:7411659-7411678 | None:intergenic | 50.0% |
| CTTGTAGGACCATCTTGCCT+CGG | + | chr8_2:7411821-7411840 | Msa1231300:intron | 50.0% | |
| AAAAAATAGGGCGCGCGAGA+AGG | - | chr8_2:7412772-7412791 | None:intergenic | 50.0% | |
| TCGCAAGTCCTCACAAGACA+GGG | - | chr8_2:7412872-7412891 | None:intergenic | 50.0% | |
| TTCGCAAGTCCTCACAAGAC+AGG | - | chr8_2:7412873-7412892 | None:intergenic | 50.0% | |
| GTGAGGACTTGCGAAACTTG+GGG | + | chr8_2:7412878-7412897 | Msa1231300:intron | 50.0% | |
| !! | CGTTTTGAATACAGGGCGTG+CGG | - | chr8_2:7412972-7412991 | None:intergenic | 50.0% |
| CGCCCTGTATTCAAAACGAG+CGG | + | chr8_2:7412974-7412993 | Msa1231300:intron | 50.0% | |
| GCCCTGTATTCAAAACGAGC+GGG | + | chr8_2:7412975-7412994 | Msa1231300:intron | 50.0% | |
| AAAGGTGGTCTGCTTCAGCT+AGG | - | chr8_2:7413067-7413086 | None:intergenic | 50.0% | |
| !! | TGGGCGAAATCTTGGTTTGG+AGG | + | chr8_2:7413126-7413145 | Msa1231300:intron | 50.0% |
| !! | CTTGGTTTGGAGGAGCAATC+TGG | + | chr8_2:7413136-7413155 | Msa1231300:intron | 50.0% |
| ACAGTCCGGATTACGTGTTC+CGG | - | chr8_2:7413288-7413307 | None:intergenic | 50.0% | |
| CGGAATGCATGAACACAGTC+CGG | - | chr8_2:7413302-7413321 | None:intergenic | 50.0% | |
| CGGACTGTGTTCATGCATTC+CGG | + | chr8_2:7413300-7413319 | Msa1231300:intron | 50.0% | |
| GAACACAGCTTCTCTACTGC+TGG | - | chr8_2:7413343-7413362 | None:intergenic | 50.0% | |
| TCATCATCTGGGGGATCAAC+AGG | - | chr8_2:7413408-7413427 | None:intergenic | 50.0% | |
| GTTGATCCCCCAGATGATGA+TGG | + | chr8_2:7413408-7413427 | Msa1231300:intron | 50.0% | |
| TCAGGTCCATCATCATCTGG+GGG | - | chr8_2:7413417-7413436 | None:intergenic | 50.0% | |
| AGAAGCTCTTCCACAACAGG+AGG | - | chr8_2:7413463-7413482 | None:intergenic | 50.0% | |
| GAGAGGAACGATTTCGTGGC+AGG | - | chr8_2:7407232-7407251 | None:intergenic | 55.0% | |
| GGAAACGAGTAGAAGAGCGG+TGG | + | chr8_2:7407412-7407431 | Msa1231300:CDS | 55.0% | |
| GCTTGAATGGCATCTCGGGA+GGG | - | chr8_2:7409636-7409655 | None:intergenic | 55.0% | |
| AGCTTGAATGGCATCTCGGG+AGG | - | chr8_2:7409637-7409656 | None:intergenic | 55.0% | |
| GGCTGCAAAGTTGGATGCTC+TGG | + | chr8_2:7409668-7409687 | Msa1231300:CDS | 55.0% | |
| !! | TTGGCTGGTCTCCACCTAGA+AGG | - | chr8_2:7410449-7410468 | None:intergenic | 55.0% |
| GGTTCACAGGCTCAGCCAAT+TGG | + | chr8_2:7411038-7411057 | Msa1231300:CDS | 55.0% | |
| GGCAAAGGGGAAGCTCCATT+AGG | - | chr8_2:7411275-7411294 | None:intergenic | 55.0% | |
| GGACTTGCGAAACTTGGGGT+TGG | + | chr8_2:7412882-7412901 | Msa1231300:intron | 55.0% | |
| GGCGTGCGGAATATCTTCTC+CGG | - | chr8_2:7412958-7412977 | None:intergenic | 55.0% | |
| TGTGCGGGAAACTGCTCAGG+AGG | + | chr8_2:7409104-7409123 | Msa1231300:CDS | 60.0% | |
| TGGCATCTCGGGAGGGTTGT+AGG | - | chr8_2:7409629-7409648 | None:intergenic | 60.0% | |
| TGGCGGCATGTTGGGTTCAC+AGG | + | chr8_2:7411025-7411044 | Msa1231300:CDS | 60.0% | |
| ATGCAGCCGACCCCACTTAG+TGG | - | chr8_2:7411480-7411499 | None:intergenic | 60.0% | |
| ACTAAGTGGGGTCGGCTGCA+TGG | + | chr8_2:7411479-7411498 | Msa1231300:intron | 60.0% | |
| AATCGCGAGCCGAGGCAAGA+TGG | - | chr8_2:7411833-7411852 | None:intergenic | 60.0% | |
| ! | TTGCCTCGGCTCGCGATTCA+AGG | + | chr8_2:7411835-7411854 | Msa1231300:intron | 60.0% |
| TCTCCTTGAATCGCGAGCCG+AGG | - | chr8_2:7411841-7411860 | None:intergenic | 60.0% | |
| TGGCGGGGGATTCTCGGATT+TGG | - | chr8_2:7413518-7413537 | None:intergenic | 60.0% | |
| GGCTGTGCGGGAAACTGCTC+AGG | + | chr8_2:7409101-7409120 | Msa1231300:CDS | 65.0% | |
| GCGCGAGAAGGCCATAGGGT+GGG | - | chr8_2:7412760-7412779 | None:intergenic | 65.0% | |
| CGCGCGAGAAGGCCATAGGG+TGG | - | chr8_2:7412761-7412780 | None:intergenic | 70.0% | |
| GGGCGCGCGAGAAGGCCATA+GGG | - | chr8_2:7412764-7412783 | None:intergenic | 70.0% | |
| AGGGCGCGCGAGAAGGCCAT+AGG | - | chr8_2:7412765-7412784 | None:intergenic | 70.0% | |
| !! | GGGTGGTGGCGGGGGATTCT+CGG | - | chr8_2:7413524-7413543 | None:intergenic | 70.0% |
| TAGACGACCGGCGGGGGTGG+TGG | - | chr8_2:7413538-7413557 | None:intergenic | 75.0% | |
| !! | ACGACCGGCGGGGGTGGTGG+CGG | - | chr8_2:7413535-7413554 | None:intergenic | 80.0% |
| ! | TCCCCCGCCACCACCCCCGC+CGG | + | chr8_2:7413528-7413547 | Msa1231300:CDS | 85.0% |
| !!! | ACCGGCGGGGGTGGTGGCGG+GGG | - | chr8_2:7413532-7413551 | None:intergenic | 85.0% |
| !! | GACCGGCGGGGGTGGTGGCG+GGG | - | chr8_2:7413533-7413552 | None:intergenic | 85.0% |
| !! | CGACCGGCGGGGGTGGTGGC+GGG | - | chr8_2:7413534-7413553 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 7407176 | 7413558 | 7407176 | ID=Msa1231300;Name=Msa1231300 |
| chr8_2 | mRNA | 7407176 | 7413558 | 7407176 | ID=Msa1231300-mRNA-1;Parent=Msa1231300;Name=Msa1231300-mRNA-1;_AED=0.05;_eAED=0.05;_QI=234|0.25|0.2|0.8|1|1|5|0|743 |
| chr8_2 | exon | 7407176 | 7407616 | 7407176 | ID=Msa1231300-mRNA-1:exon:2795;Parent=Msa1231300-mRNA-1 |
| chr8_2 | exon | 7408961 | 7409737 | 7408961 | ID=Msa1231300-mRNA-1:exon:2796;Parent=Msa1231300-mRNA-1 |
| chr8_2 | exon | 7410167 | 7410322 | 7410167 | ID=Msa1231300-mRNA-1:exon:2797;Parent=Msa1231300-mRNA-1 |
| chr8_2 | exon | 7410438 | 7411391 | 7410438 | ID=Msa1231300-mRNA-1:exon:2798;Parent=Msa1231300-mRNA-1 |
| chr8_2 | exon | 7413421 | 7413558 | 7413421 | ID=Msa1231300-mRNA-1:exon:2799;Parent=Msa1231300-mRNA-1 |
| chr8_2 | five_prime_UTR | 7407176 | 7407409 | 7407176 | ID=Msa1231300-mRNA-1:five_prime_utr;Parent=Msa1231300-mRNA-1 |
| chr8_2 | CDS | 7407410 | 7407616 | 7407410 | ID=Msa1231300-mRNA-1:cds;Parent=Msa1231300-mRNA-1 |
| chr8_2 | CDS | 7408961 | 7409737 | 7408961 | ID=Msa1231300-mRNA-1:cds;Parent=Msa1231300-mRNA-1 |
| chr8_2 | CDS | 7410167 | 7410322 | 7410167 | ID=Msa1231300-mRNA-1:cds;Parent=Msa1231300-mRNA-1 |
| chr8_2 | CDS | 7410438 | 7411391 | 7410438 | ID=Msa1231300-mRNA-1:cds;Parent=Msa1231300-mRNA-1 |
| chr8_2 | CDS | 7413421 | 7413558 | 7413421 | ID=Msa1231300-mRNA-1:cds;Parent=Msa1231300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
