Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232080 | KEH18240.1 | 57.692 | 130 | 53 | 2 | 1 | 129 | 6 | 134 | 8.28e-38 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232080 | sp|C0LGD6|Y1570_ARATH | 50.000 | 90 | 34 | 3 | 42 | 129 | 24 | 104 | 1.19e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1232080 | Msa1232090 | 0.845908 | 3.028603e-59 | -8.615850e-47 |
| Msa1232080 | Msa1274840 | 0.905325 | 4.836480e-80 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232080 | MtrunA17_Chr8g0341111 | 57.692 | 130 | 53 | 2 | 1 | 129 | 6 | 134 | 7.69e-42 | 149 |
| Msa1232080 | MtrunA17_Chr8g0341061 | 55.469 | 128 | 55 | 2 | 3 | 129 | 12 | 138 | 7.01e-41 | 147 |
| Msa1232080 | MtrunA17_Chr8g0341091 | 55.385 | 130 | 56 | 2 | 1 | 129 | 6 | 134 | 1.72e-39 | 142 |
| Msa1232080 | MtrunA17_Chr8g0341101 | 50.769 | 130 | 62 | 2 | 1 | 129 | 9 | 137 | 9.78e-29 | 112 |
| Msa1232080 | MtrunA17_Chr5g0423881 | 39.080 | 87 | 52 | 1 | 40 | 125 | 53 | 139 | 4.17e-14 | 70.1 |
| Msa1232080 | MtrunA17_Chr2g0330591 | 42.045 | 88 | 45 | 2 | 43 | 128 | 22 | 105 | 7.29e-13 | 66.6 |
| Msa1232080 | MtrunA17_Chr6g0487571 | 41.111 | 90 | 49 | 2 | 46 | 133 | 25 | 112 | 2.63e-12 | 65.1 |
| Msa1232080 | MtrunA17_Chr6g0487561 | 41.176 | 85 | 48 | 1 | 35 | 117 | 23 | 107 | 5.37e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232080 | AT1G05700.2 | 50.000 | 90 | 34 | 3 | 42 | 129 | 24 | 104 | 1.08e-16 | 78.2 |
| Msa1232080 | AT1G05700.1 | 50.000 | 90 | 34 | 3 | 42 | 129 | 24 | 104 | 1.21e-16 | 78.2 |
| Msa1232080 | AT4G29990.1 | 45.882 | 85 | 40 | 3 | 42 | 124 | 20 | 100 | 2.64e-16 | 77.0 |
| Msa1232080 | AT4G29990.2 | 45.882 | 85 | 40 | 3 | 42 | 124 | 20 | 100 | 3.59e-16 | 76.6 |
| Msa1232080 | AT2G19210.1 | 46.429 | 84 | 39 | 3 | 43 | 124 | 25 | 104 | 7.72e-15 | 72.8 |
| Msa1232080 | AT1G49100.1 | 43.529 | 85 | 40 | 3 | 43 | 124 | 24 | 103 | 2.33e-14 | 71.2 |
| Msa1232080 | AT2G19230.1 | 44.048 | 84 | 41 | 3 | 43 | 124 | 24 | 103 | 5.57e-14 | 70.5 |
| Msa1232080 | AT2G19230.2 | 44.048 | 84 | 41 | 3 | 43 | 124 | 24 | 103 | 6.27e-14 | 70.1 |
| Msa1232080 | AT3G46330.1 | 37.931 | 87 | 46 | 3 | 42 | 124 | 22 | 104 | 2.67e-12 | 65.5 |
| Msa1232080 | AT3G46330.2 | 37.931 | 87 | 46 | 3 | 42 | 124 | 22 | 104 | 2.87e-12 | 65.1 |
| Msa1232080 | AT4G29180.2 | 36.522 | 115 | 60 | 3 | 17 | 129 | 6 | 109 | 3.65e-12 | 65.1 |
| Msa1232080 | AT4G29180.3 | 36.522 | 115 | 60 | 3 | 17 | 129 | 6 | 109 | 3.86e-12 | 65.1 |
| Msa1232080 | AT4G29180.1 | 38.182 | 110 | 60 | 2 | 22 | 129 | 6 | 109 | 4.08e-12 | 64.7 |
| Msa1232080 | AT2G28990.2 | 42.169 | 83 | 40 | 4 | 43 | 122 | 19 | 96 | 1.56e-11 | 63.2 |
| Msa1232080 | AT2G28990.1 | 42.169 | 83 | 40 | 4 | 43 | 122 | 19 | 96 | 1.56e-11 | 63.2 |
Find 36 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGCTAAAATTGTTGAAAA+AGG | 0.141459 | 8_2:-8363145 | None:intergenic |
| ACTTCGGATGGTAATTTATA+CGG | 0.217400 | 8_2:-8364490 | None:intergenic |
| TAGCAATTCCTTTCTCCTTC+TGG | 0.249609 | 8_2:-8363192 | None:intergenic |
| CAAGCAATATGCGTGCATTT+AGG | 0.294976 | 8_2:-8360656 | None:intergenic |
| TATGCGTGCATTTAGGATTA+AGG | 0.303672 | 8_2:-8360649 | None:intergenic |
| TACGGGTCATTATTTGTATT+GGG | 0.326169 | 8_2:-8364472 | None:intergenic |
| ATACGGGTCATTATTTGTAT+TGG | 0.333367 | 8_2:-8364473 | None:intergenic |
| GACGAAGGATTTGTGGAAAC+AGG | 0.376489 | 8_2:+8363087 | Msa1232080:CDS |
| GATTACCTGGACGATGATAC+TGG | 0.404914 | 8_2:+8363048 | Msa1232080:CDS |
| TGTGACGCATCCGTTGGAAT+TGG | 0.407738 | 8_2:+8364429 | Msa1232080:CDS |
| TGCACGCATATTGCTTGTCT+TGG | 0.420986 | 8_2:+8360662 | Msa1232080:CDS |
| TCATCAGTCTCGGCAGGATC+AGG | 0.426149 | 8_2:-8364595 | None:intergenic |
| TAAGAAAGACGAAGGATTTG+TGG | 0.453315 | 8_2:+8363080 | Msa1232080:CDS |
| GATATGAAACATTAAGTGAT+TGG | 0.453665 | 8_2:-8364528 | None:intergenic |
| CTTCGGATGGTAATTTATAC+GGG | 0.490064 | 8_2:-8364489 | None:intergenic |
| CATTGATTGTGGATCAAAAG+AGG | 0.501597 | 8_2:+8363026 | Msa1232080:CDS |
| GACTGCATTCCTCATTACTT+CGG | 0.507975 | 8_2:-8364506 | None:intergenic |
| TTTGCAAAAGATCAAAATCC+TGG | 0.516910 | 8_2:+8360744 | Msa1232080:CDS |
| GATGGTTTCCAGAAGGAGAA+AGG | 0.532710 | 8_2:+8363184 | Msa1232080:CDS |
| AGAAAACAGAGAATAACGTA+AGG | 0.539889 | 8_2:-8364569 | None:intergenic |
| TAATACTCATCAGTCTCGGC+AGG | 0.541799 | 8_2:-8364601 | None:intergenic |
| GAAAATTTAACACAATGAGA+TGG | 0.547399 | 8_2:+8363166 | Msa1232080:CDS |
| GCATTCCTCATTACTTCGGA+TGG | 0.554134 | 8_2:-8364502 | None:intergenic |
| TAATTCCAGTATCATCGTCC+AGG | 0.554972 | 8_2:-8363053 | None:intergenic |
| TTTGATTCTTCCAATTCCAA+CGG | 0.557591 | 8_2:-8364439 | None:intergenic |
| AATTACCATCCGAAGTAATG+AGG | 0.562562 | 8_2:+8364497 | Msa1232080:CDS |
| TCAAACTGTGACGCATCCGT+TGG | 0.570450 | 8_2:+8364423 | Msa1232080:CDS |
| TGGATCAAAAGAGGATTACC+TGG | 0.590189 | 8_2:+8363035 | Msa1232080:CDS |
| ATAATAATACTCATCAGTCT+CGG | 0.602168 | 8_2:-8364605 | None:intergenic |
| GCGTGCATTTAGGATTAAGG+TGG | 0.603898 | 8_2:-8360646 | None:intergenic |
| ATTATGTATAAGAAAGACGA+AGG | 0.614913 | 8_2:+8363072 | Msa1232080:CDS |
| TCAGTCTCGGCAGGATCAGG+AGG | 0.629231 | 8_2:-8364592 | None:intergenic |
| GAAAACAGAGAATAACGTAA+GGG | 0.634313 | 8_2:-8364568 | None:intergenic |
| AGGATTAAGGTGGAAATACG+CGG | 0.636246 | 8_2:-8360636 | None:intergenic |
| ACAATGAGATGGTTTCCAGA+AGG | 0.649230 | 8_2:+8363177 | Msa1232080:CDS |
| TACACGTTGAAACCAAAACA+AGG | 0.702853 | 8_2:+8363213 | Msa1232080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTATTTAACATTTTTTA+CGG | + | chr8_2:8362621-8362640 | Msa1232080:intron | 10.0% |
| !!! | TCTTTTTTTTTTTTTTTGAA+AGG | + | chr8_2:8362708-8362727 | Msa1232080:intron | 10.0% |
| !! | ACTTGTCATTAAAAAAAATA+TGG | - | chr8_2:8360856-8360875 | None:intergenic | 15.0% |
| !!! | TTCGTTTCAATTTTTAATTT+AGG | + | chr8_2:8361044-8361063 | Msa1232080:intron | 15.0% |
| !! | CAAAAAAAAAAAAAAAGAAC+CGG | - | chr8_2:8362706-8362725 | None:intergenic | 15.0% |
| !! | AATCTAAAAATATAACTAGA+CGG | - | chr8_2:8362737-8362756 | None:intergenic | 15.0% |
| !! | AATAATAGGTATCTATAATA+AGG | + | chr8_2:8363240-8363259 | Msa1232080:intron | 15.0% |
| !! | ATAATAGGTATCTATAATAA+GGG | + | chr8_2:8363241-8363260 | Msa1232080:intron | 15.0% |
| !!! | TCTCTAAATTTTAATCTTTA+GGG | + | chr8_2:8363823-8363842 | Msa1232080:intron | 15.0% |
| !!! | GTTTTTTAGTTTGTTTGTTT+TGG | - | chr8_2:8361338-8361357 | None:intergenic | 20.0% |
| !!! | TATTTTTCGAGTGTTTATTT+GGG | - | chr8_2:8361579-8361598 | None:intergenic | 20.0% |
| !!! | GTGTTTAGTTTTATCTTTTT+AGG | - | chr8_2:8361798-8361817 | None:intergenic | 20.0% |
| !! | AAATAGGATCAGATTAAAAA+AGG | + | chr8_2:8361906-8361925 | Msa1232080:intron | 20.0% |
| !!! | AAATTTTGGTTGTTTTCAAT+TGG | - | chr8_2:8361966-8361985 | None:intergenic | 20.0% |
| !!! | TTTTGGAGATATTTTGTTTT+TGG | - | chr8_2:8362052-8362071 | None:intergenic | 20.0% |
| !!! | GTATTGGAAGTTTATTTTAT+TGG | - | chr8_2:8362363-8362382 | None:intergenic | 20.0% |
| !!! | TTTGCTTTAAAAACATATCA+GGG | - | chr8_2:8362773-8362792 | None:intergenic | 20.0% |
| !! | ATAAGTGTATTCATTCATAT+AGG | + | chr8_2:8362994-8363013 | Msa1232080:intron | 20.0% |
| !!! | CTATTATTTTTTCCTTGTTT+TGG | - | chr8_2:8363228-8363247 | None:intergenic | 20.0% |
| !! | CAAAACAAGGAAAAAATAAT+AGG | + | chr8_2:8363226-8363245 | Msa1232080:CDS | 20.0% |
| !!! | ATAAGGGATTTCTTTTTATA+TGG | + | chr8_2:8363257-8363276 | Msa1232080:intron | 20.0% |
| !!! | TTTTTATATGGAAACTATGA+TGG | + | chr8_2:8363269-8363288 | Msa1232080:intron | 20.0% |
| !! | AATATGTAGTTCAAAATATG+GGG | - | chr8_2:8363306-8363325 | None:intergenic | 20.0% |
| !! | CAATATGTAGTTCAAAATAT+GGG | - | chr8_2:8363307-8363326 | None:intergenic | 20.0% |
| !! | ACATTTATAATATCAGTTGA+AGG | - | chr8_2:8363395-8363414 | None:intergenic | 20.0% |
| !!! | GTCTCTAAATTTTAATCTTT+AGG | + | chr8_2:8363822-8363841 | Msa1232080:intron | 20.0% |
| !! | ATAGCTCACTATATTTATTT+AGG | - | chr8_2:8364001-8364020 | None:intergenic | 20.0% |
| !! | TCATATTTGAATAAGTTCAT+TGG | + | chr8_2:8364296-8364315 | Msa1232080:intron | 20.0% |
| !! | AAGGGATAAGAAAAAATTAA+GGG | - | chr8_2:8364553-8364572 | None:intergenic | 20.0% |
| !! | TAAGGGATAAGAAAAAATTA+AGG | - | chr8_2:8364554-8364573 | None:intergenic | 20.0% |
| ! | TACGTATAATTAACCATAAC+AGG | + | chr8_2:8360767-8360786 | Msa1232080:intron | 25.0% |
| ! | ACGTATAATTAACCATAACA+GGG | + | chr8_2:8360768-8360787 | Msa1232080:intron | 25.0% |
| !! | AAGTTGGTTAATTTGATTGT+TGG | + | chr8_2:8360814-8360833 | Msa1232080:intron | 25.0% |
| !!! | TTTGATTGTTGGTTTCATTT+TGG | + | chr8_2:8360825-8360844 | Msa1232080:intron | 25.0% |
| ! | ATAACGTAAAACGAAGATAT+GGG | - | chr8_2:8361111-8361130 | None:intergenic | 25.0% |
| ! | AATAACGTAAAACGAAGATA+TGG | - | chr8_2:8361112-8361131 | None:intergenic | 25.0% |
| !! | AGAAAGTACATATAGCAAAA+TGG | + | chr8_2:8361226-8361245 | Msa1232080:intron | 25.0% |
| !! | GAAAGTACATATAGCAAAAT+GGG | + | chr8_2:8361227-8361246 | Msa1232080:intron | 25.0% |
| !!! | TATTAGCGTTTTAATGTACA+AGG | - | chr8_2:8361289-8361308 | None:intergenic | 25.0% |
| !!! | TTTTAGTTTGTTTGTTTTGG+TGG | - | chr8_2:8361335-8361354 | None:intergenic | 25.0% |
| !!! | GTATTTTTCGAGTGTTTATT+TGG | - | chr8_2:8361580-8361599 | None:intergenic | 25.0% |
| ! | TACATAATCAAACACTCATT+CGG | + | chr8_2:8361597-8361616 | Msa1232080:intron | 25.0% |
| !!! | AAGTTATTTTGAGCTTGTAA+TGG | - | chr8_2:8361663-8361682 | None:intergenic | 25.0% |
| ! | TACAAGCTCAAAATAACTTT+AGG | + | chr8_2:8361664-8361683 | Msa1232080:intron | 25.0% |
| !!! | GGAAGTTTATTTTATTGGTT+GGG | - | chr8_2:8362358-8362377 | None:intergenic | 25.0% |
| !!! | TGGAAGTTTATTTTATTGGT+TGG | - | chr8_2:8362359-8362378 | None:intergenic | 25.0% |
| ! | TAGTGCAAATTTGTAATTGT+TGG | - | chr8_2:8362500-8362519 | None:intergenic | 25.0% |
| !!! | CTTTGCTTTAAAAACATATC+AGG | - | chr8_2:8362774-8362793 | None:intergenic | 25.0% |
| ! | TGAAGAAAAAAACAAAACCA+TGG | + | chr8_2:8362810-8362829 | Msa1232080:intron | 25.0% |
| ! | GAAGAAAAAAACAAAACCAT+GGG | + | chr8_2:8362811-8362830 | Msa1232080:intron | 25.0% |
| ! | AAGAAAAAAACAAAACCATG+GGG | + | chr8_2:8362812-8362831 | Msa1232080:intron | 25.0% |
| ! | TGAATACACTTATGAAGTAA+AGG | - | chr8_2:8362987-8363006 | None:intergenic | 25.0% |
| ! | ATTATGTATAAGAAAGACGA+AGG | + | chr8_2:8363072-8363091 | Msa1232080:CDS | 25.0% |
| ! | CTGCTAAAATTGTTGAAAAA+GGG | - | chr8_2:8363147-8363166 | None:intergenic | 25.0% |
| ! | TCTGCTAAAATTGTTGAAAA+AGG | - | chr8_2:8363148-8363167 | None:intergenic | 25.0% |
| ! | GAAAATTTAACACAATGAGA+TGG | + | chr8_2:8363166-8363185 | Msa1232080:CDS | 25.0% |
| ! | ATATGTAGTTCAAAATATGG+GGG | - | chr8_2:8363305-8363324 | None:intergenic | 25.0% |
| ! | CCAATATGTAGTTCAAAATA+TGG | - | chr8_2:8363308-8363327 | None:intergenic | 25.0% |
| !!! | CCATATTTTGAACTACATAT+TGG | + | chr8_2:8363305-8363324 | Msa1232080:intron | 25.0% |
| !! | TGGGAAAAAATTCATCTTTT+CGG | + | chr8_2:8363338-8363357 | Msa1232080:intron | 25.0% |
| ! | AATATTCTCTAGCTAATACT+AGG | + | chr8_2:8363677-8363696 | Msa1232080:intron | 25.0% |
| !! | ATATAAGAGTCTCTAAAGAA+AGG | + | chr8_2:8363796-8363815 | Msa1232080:intron | 25.0% |
| ! | GAAACTTGATAGAAGAAATT+AGG | - | chr8_2:8364045-8364064 | None:intergenic | 25.0% |
| ! | CACATAATTCTTGTAATCAA+GGG | - | chr8_2:8364267-8364286 | None:intergenic | 25.0% |
| ! | TCACATAATTCTTGTAATCA+AGG | - | chr8_2:8364268-8364287 | None:intergenic | 25.0% |
| ! | TTACAAGAATTATGTGACTA+TGG | + | chr8_2:8364271-8364290 | Msa1232080:intron | 25.0% |
| ! | GATATGAAACATTAAGTGAT+TGG | - | chr8_2:8364531-8364550 | None:intergenic | 25.0% |
| ! | ATAATAATACTCATCAGTCT+CGG | - | chr8_2:8364608-8364627 | None:intergenic | 25.0% |
| TTTGCAAAAGATCAAAATCC+TGG | + | chr8_2:8360744-8360763 | Msa1232080:CDS | 30.0% | |
| TATGGTTAATTATACGTACC+AGG | - | chr8_2:8360765-8360784 | None:intergenic | 30.0% | |
| ! | ATAACAGGGTATGCTTTTAA+GGG | + | chr8_2:8360782-8360801 | Msa1232080:intron | 30.0% |
| TTAAGGGAAATTGCAAAAGT+TGG | + | chr8_2:8360798-8360817 | Msa1232080:intron | 30.0% | |
| TAGCAAAATGGGTCATATAT+AGG | + | chr8_2:8361238-8361257 | Msa1232080:intron | 30.0% | |
| TTTAATGTACAAGGTGTATG+TGG | - | chr8_2:8361280-8361299 | None:intergenic | 30.0% | |
| TTAGTTTCTGCAGTTGTATT+GGG | - | chr8_2:8361403-8361422 | None:intergenic | 30.0% | |
| ! | TTTAGTTTCTGCAGTTGTAT+TGG | - | chr8_2:8361404-8361423 | None:intergenic | 30.0% |
| ACTCCATAAACAAATCAATG+AGG | + | chr8_2:8361730-8361749 | Msa1232080:intron | 30.0% | |
| !! | AAATCTCTGGAATAGTCAAT+AGG | + | chr8_2:8361869-8361888 | Msa1232080:intron | 30.0% |
| !!! | ATTTTGTTTTTGGAGCTTGT+GGG | - | chr8_2:8362042-8362061 | None:intergenic | 30.0% |
| !!! | TATTTTGTTTTTGGAGCTTG+TGG | - | chr8_2:8362043-8362062 | None:intergenic | 30.0% |
| !!! | TTGTGGGTTGTTTTGTTTTT+TGG | - | chr8_2:8362069-8362088 | None:intergenic | 30.0% |
| !! | TTTTATTGGTTGGGTTAATG+TGG | - | chr8_2:8362349-8362368 | None:intergenic | 30.0% |
| !!! | CTTGTGTGTTTCCATTTTTT+GGG | - | chr8_2:8362405-8362424 | None:intergenic | 30.0% |
| AACTTGATTCAACCCAAATT+AGG | - | chr8_2:8362563-8362582 | None:intergenic | 30.0% | |
| TTTGTCATCATGTTCAATCA+TGG | + | chr8_2:8362659-8362678 | Msa1232080:intron | 30.0% | |
| ! | TAGATATGCAACTTTTTGCA+TGG | - | chr8_2:8362853-8362872 | None:intergenic | 30.0% |
| TAGCTAGATAATGTTTGTAG+GGG | - | chr8_2:8362882-8362901 | None:intergenic | 30.0% | |
| CTAGCTAGATAATGTTTGTA+GGG | - | chr8_2:8362883-8362902 | None:intergenic | 30.0% | |
| !!! | GGTTTTATAAGCATTGATTG+TGG | + | chr8_2:8363015-8363034 | Msa1232080:intron | 30.0% |
| TACATATTGGAGTCAATCTT+TGG | + | chr8_2:8363318-8363337 | Msa1232080:intron | 30.0% | |
| ACATATTGGAGTCAATCTTT+GGG | + | chr8_2:8363319-8363338 | Msa1232080:intron | 30.0% | |
| TAAATGATCTCCGTCATATA+AGG | - | chr8_2:8363368-8363387 | None:intergenic | 30.0% | |
| CTATCATGAAATAGTAGCAA+CGG | - | chr8_2:8363533-8363552 | None:intergenic | 30.0% | |
| !!! | TCACCCGATAACTTTTTTTT+GGG | + | chr8_2:8363587-8363606 | Msa1232080:intron | 30.0% |
| TACCCCAAAAAAAAGTTATC+GGG | - | chr8_2:8363593-8363612 | None:intergenic | 30.0% | |
| GTACCCCAAAAAAAAGTTAT+CGG | - | chr8_2:8363594-8363613 | None:intergenic | 30.0% | |
| GACAATCGAATGTAAAATAG+TGG | - | chr8_2:8363721-8363740 | None:intergenic | 30.0% | |
| TACTTTCACGTAAAATTGAC+TGG | + | chr8_2:8363754-8363773 | Msa1232080:intron | 30.0% | |
| GTATTATTACTACTACGAAC+CGG | - | chr8_2:8363979-8363998 | None:intergenic | 30.0% | |
| ACAAAGACGATGTATATGAT+TGG | + | chr8_2:8364359-8364378 | Msa1232080:intron | 30.0% | |
| ACGATGTATATGATTGGATA+TGG | + | chr8_2:8364365-8364384 | Msa1232080:intron | 30.0% | |
| TAACAAATAGTAGACTCCAT+GGG | - | chr8_2:8364402-8364421 | None:intergenic | 30.0% | |
| TTAACAAATAGTAGACTCCA+TGG | - | chr8_2:8364403-8364422 | None:intergenic | 30.0% | |
| TTTGATTCTTCCAATTCCAA+CGG | - | chr8_2:8364442-8364461 | None:intergenic | 30.0% | |
| TACGGGTCATTATTTGTATT+GGG | - | chr8_2:8364475-8364494 | None:intergenic | 30.0% | |
| ATACGGGTCATTATTTGTAT+TGG | - | chr8_2:8364476-8364495 | None:intergenic | 30.0% | |
| ACTTCGGATGGTAATTTATA+CGG | - | chr8_2:8364493-8364512 | None:intergenic | 30.0% | |
| GAAAACAGAGAATAACGTAA+GGG | - | chr8_2:8364571-8364590 | None:intergenic | 30.0% | |
| AGAAAACAGAGAATAACGTA+AGG | - | chr8_2:8364572-8364591 | None:intergenic | 30.0% | |
| ! | TATGCGTGCATTTAGGATTA+AGG | - | chr8_2:8360652-8360671 | None:intergenic | 35.0% |
| ! | CTTAAAAGCATACCCTGTTA+TGG | - | chr8_2:8360783-8360802 | None:intergenic | 35.0% |
| ! | CATAACAGGGTATGCTTTTA+AGG | + | chr8_2:8360781-8360800 | Msa1232080:intron | 35.0% |
| ATATGTACTTTCTGTCTTGC+CGG | - | chr8_2:8361219-8361238 | None:intergenic | 35.0% | |
| CAAAATGGGTCATATATAGG+CGG | + | chr8_2:8361241-8361260 | Msa1232080:intron | 35.0% | |
| !!! | ACAAGGTGTATGTGGTTTTT+TGG | - | chr8_2:8361272-8361291 | None:intergenic | 35.0% |
| ATAAAGACAACACGAACCAA+TGG | + | chr8_2:8361306-8361325 | Msa1232080:intron | 35.0% | |
| TAGTTTCTGCAGTTGTATTG+GGG | - | chr8_2:8361402-8361421 | None:intergenic | 35.0% | |
| !! | ATCCATTTTGATGGTTGTTG+GGG | - | chr8_2:8361511-8361530 | None:intergenic | 35.0% |
| !! | GATCCATTTTGATGGTTGTT+GGG | - | chr8_2:8361512-8361531 | None:intergenic | 35.0% |
| AGTTGAGGAAAATAAAGGTG+AGG | - | chr8_2:8361553-8361572 | None:intergenic | 35.0% | |
| !!! | ATCACTTTTGCTTTGAGATC+GGG | - | chr8_2:8361703-8361722 | None:intergenic | 35.0% |
| !!! | GATCACTTTTGCTTTGAGAT+CGG | - | chr8_2:8361704-8361723 | None:intergenic | 35.0% |
| GATCTCAAAGCAAAAGTGAT+CGG | + | chr8_2:8361703-8361722 | Msa1232080:intron | 35.0% | |
| GATTATGATGTCTTCTCTGA+TGG | - | chr8_2:8361773-8361792 | None:intergenic | 35.0% | |
| !! | ATTTGTGGATTGGATTCTTG+CGG | - | chr8_2:8361853-8361872 | None:intergenic | 35.0% |
| TATTCCAGAGATTTGTGGAT+TGG | - | chr8_2:8361863-8361882 | None:intergenic | 35.0% | |
| TTGACTATTCCAGAGATTTG+TGG | - | chr8_2:8361868-8361887 | None:intergenic | 35.0% | |
| !! | TTGGCTCATGGTTTGATTTT+GGG | - | chr8_2:8361947-8361966 | None:intergenic | 35.0% |
| !! | ATTGGCTCATGGTTTGATTT+TGG | - | chr8_2:8361948-8361967 | None:intergenic | 35.0% |
| ! | CTGCTAGATCTTGGAAATTT+TGG | - | chr8_2:8361980-8361999 | None:intergenic | 35.0% |
| ! | GATGATGATGAGTAACTTGT+GGG | - | chr8_2:8362085-8362104 | None:intergenic | 35.0% |
| ! | TGATGATGATGAGTAACTTG+TGG | - | chr8_2:8362086-8362105 | None:intergenic | 35.0% |
| ! | TAATGGTGTGTCTTTTTGTG+TGG | - | chr8_2:8362132-8362151 | None:intergenic | 35.0% |
| ! | TAACATAAGATGGTGGTTGT+TGG | - | chr8_2:8362178-8362197 | None:intergenic | 35.0% |
| !!! | CTGGTGTTGTTTTGAGTTAA+CGG | - | chr8_2:8362226-8362245 | None:intergenic | 35.0% |
| !!! | TTAATGTGGCTGTTTTTTGG+AGG | - | chr8_2:8362335-8362354 | None:intergenic | 35.0% |
| !! | TTTTGGGAGGTAATTGTGTT+GGG | - | chr8_2:8362389-8362408 | None:intergenic | 35.0% |
| !! | TTTTTGGGAGGTAATTGTGT+TGG | - | chr8_2:8362390-8362409 | None:intergenic | 35.0% |
| CACAATTACCTCCCAAAAAA+TGG | + | chr8_2:8362391-8362410 | Msa1232080:intron | 35.0% | |
| !!! | GCTTGTGTGTTTCCATTTTT+TGG | - | chr8_2:8362406-8362425 | None:intergenic | 35.0% |
| CTAGCTAGTACTAAATTGCA+GGG | - | chr8_2:8362431-8362450 | None:intergenic | 35.0% | |
| !! | TGTTGGTTTCAACATTCCAA+CGG | - | chr8_2:8362483-8362502 | None:intergenic | 35.0% |
| !! | AGACAACTGAAGAGTATTGT+TGG | - | chr8_2:8362540-8362559 | None:intergenic | 35.0% |
| TCTTCAGTTGTCTCCTAATT+TGG | + | chr8_2:8362547-8362566 | Msa1232080:intron | 35.0% | |
| CTTCAGTTGTCTCCTAATTT+GGG | + | chr8_2:8362548-8362567 | Msa1232080:intron | 35.0% | |
| !! | GGTTGAATCAAGTTGAATTG+AGG | + | chr8_2:8362569-8362588 | Msa1232080:intron | 35.0% |
| ! | TGAATTGAGGTTGACTCAAT+TGG | + | chr8_2:8362582-8362601 | Msa1232080:intron | 35.0% |
| GCTAGCTAGATAATGTTTGT+AGG | - | chr8_2:8362884-8362903 | None:intergenic | 35.0% | |
| ! | CATTGATTGTGGATCAAAAG+AGG | + | chr8_2:8363026-8363045 | Msa1232080:CDS | 35.0% |
| TAAGAAAGACGAAGGATTTG+TGG | + | chr8_2:8363080-8363099 | Msa1232080:CDS | 35.0% | |
| AAAAAGGGTAATTCTGCAGT+GGG | - | chr8_2:8363132-8363151 | None:intergenic | 35.0% | |
| TACACGTTGAAACCAAAACA+AGG | + | chr8_2:8363213-8363232 | Msa1232080:CDS | 35.0% | |
| AATGTGTGCATTGTAACCAA+TGG | + | chr8_2:8363410-8363429 | Msa1232080:intron | 35.0% | |
| AATTCCTTGCATTTCGACAT+TGG | + | chr8_2:8363439-8363458 | Msa1232080:intron | 35.0% | |
| AATTCCAATGTCGAAATGCA+AGG | - | chr8_2:8363446-8363465 | None:intergenic | 35.0% | |
| TGGTAAATGGAGTTGTTCAA+AGG | - | chr8_2:8363473-8363492 | None:intergenic | 35.0% | |
| CGTTGCTACTATTTCATGAT+AGG | + | chr8_2:8363531-8363550 | Msa1232080:intron | 35.0% | |
| CATGATAGGCTTCATGTAAT+TGG | + | chr8_2:8363545-8363564 | Msa1232080:intron | 35.0% | |
| !!! | GTCACCCGATAACTTTTTTT+TGG | + | chr8_2:8363586-8363605 | Msa1232080:intron | 35.0% |
| !!! | CACCCGATAACTTTTTTTTG+GGG | + | chr8_2:8363588-8363607 | Msa1232080:intron | 35.0% |
| AGAAGAATTCGGTACGTATA+GGG | + | chr8_2:8363933-8363952 | Msa1232080:intron | 35.0% | |
| AGAAGAACATGAACAAAGAG+TGG | - | chr8_2:8364075-8364094 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTTCAACCAATCAG+CGG | + | chr8_2:8364148-8364167 | Msa1232080:intron | 35.0% |
| ATCAAGGGAGAATTGCAAAT+TGG | - | chr8_2:8364252-8364271 | None:intergenic | 35.0% | |
| CTTCGGATGGTAATTTATAC+GGG | - | chr8_2:8364492-8364511 | None:intergenic | 35.0% | |
| AATTACCATCCGAAGTAATG+AGG | + | chr8_2:8364497-8364516 | Msa1232080:CDS | 35.0% | |
| AGGATTAAGGTGGAAATACG+CGG | - | chr8_2:8360639-8360658 | None:intergenic | 40.0% | |
| CAAGCAATATGCGTGCATTT+AGG | - | chr8_2:8360659-8360678 | None:intergenic | 40.0% | |
| CGTAAAACGAAGATATGGGT+AGG | - | chr8_2:8361107-8361126 | None:intergenic | 40.0% | |
| !!! | TTTGTTTTGGTGGTAGCCAT+TGG | - | chr8_2:8361325-8361344 | None:intergenic | 40.0% |
| TGTTGCGAGTAGAAGACAAT+AGG | - | chr8_2:8361481-8361500 | None:intergenic | 40.0% | |
| !! | TCCATTTTGATGGTTGTTGG+GGG | - | chr8_2:8361510-8361529 | None:intergenic | 40.0% |
| !! | CGATCCATTTTGATGGTTGT+TGG | - | chr8_2:8361513-8361532 | None:intergenic | 40.0% |
| ! | GTGGTTTCGATCCATTTTGA+TGG | - | chr8_2:8361520-8361539 | None:intergenic | 40.0% |
| !! | AAGGTGAGGTGTTGTTATAG+TGG | - | chr8_2:8361539-8361558 | None:intergenic | 40.0% |
| GGCTCAGTTGAGGAAAATAA+AGG | - | chr8_2:8361558-8361577 | None:intergenic | 40.0% | |
| TGTTTATTTGGGCTCAGTTG+AGG | - | chr8_2:8361568-8361587 | None:intergenic | 40.0% | |
| GCTTGTAATGGTGTCTTATC+TGG | - | chr8_2:8361651-8361670 | None:intergenic | 40.0% | |
| !! | GGGCCTCATTGATTTGTTTA+TGG | - | chr8_2:8361736-8361755 | None:intergenic | 40.0% |
| TGATGGTTCGAAAGTTGAAG+GGG | - | chr8_2:8361756-8361775 | None:intergenic | 40.0% | |
| CTGATGGTTCGAAAGTTGAA+GGG | - | chr8_2:8361757-8361776 | None:intergenic | 40.0% | |
| TCTGATGGTTCGAAAGTTGA+AGG | - | chr8_2:8361758-8361777 | None:intergenic | 40.0% | |
| !!! | GTTACTTTTGCTTCGAGATC+GGG | - | chr8_2:8361826-8361845 | None:intergenic | 40.0% |
| !!! | GGTTACTTTTGCTTCGAGAT+CGG | - | chr8_2:8361827-8361846 | None:intergenic | 40.0% |
| !! | TTTGTGGATTGGATTCTTGC+GGG | - | chr8_2:8361852-8361871 | None:intergenic | 40.0% |
| GAATCCAATCCACAAATCTC+TGG | + | chr8_2:8361856-8361875 | Msa1232080:intron | 40.0% | |
| !! | TCTCTGGAATAGTCAATAGG+TGG | + | chr8_2:8361872-8361891 | Msa1232080:intron | 40.0% |
| GGTGGAGCAATAACGTAAAT+AGG | + | chr8_2:8361890-8361909 | Msa1232080:intron | 40.0% | |
| !! | GGTTGTTTTCAATTGGCTCA+TGG | - | chr8_2:8361959-8361978 | None:intergenic | 40.0% |
| !! | TTTGTGTGGTGGTGAGTTTT+TGG | - | chr8_2:8362118-8362137 | None:intergenic | 40.0% |
| GGTGGGAGTTGAAATGTTAA+TGG | - | chr8_2:8362149-8362168 | None:intergenic | 40.0% | |
| !! | TTGGCGTTGGTAACATAAGA+TGG | - | chr8_2:8362188-8362207 | None:intergenic | 40.0% |
| ATCTCAAGTTAACTGCGATG+TGG | - | chr8_2:8362278-8362297 | None:intergenic | 40.0% | |
| !!! | GGGTTAATGTGGCTGTTTTT+TGG | - | chr8_2:8362338-8362357 | None:intergenic | 40.0% |
| TAATTGTGTTGGGGTGGTAT+TGG | - | chr8_2:8362379-8362398 | None:intergenic | 40.0% | |
| TTTGGGAGGTAATTGTGTTG+GGG | - | chr8_2:8362388-8362407 | None:intergenic | 40.0% | |
| !!! | GTGTGTTTCCATTTTTTGGG+AGG | - | chr8_2:8362402-8362421 | None:intergenic | 40.0% |
| CCTAGCTAGTACTAAATTGC+AGG | - | chr8_2:8362432-8362451 | None:intergenic | 40.0% | |
| CCTGCAATTTAGTACTAGCT+AGG | + | chr8_2:8362429-8362448 | Msa1232080:intron | 40.0% | |
| TCATCATGTTCAATCATGGC+TGG | + | chr8_2:8362663-8362682 | Msa1232080:intron | 40.0% | |
| GGCTTTACAAATTCACTGTC+CGG | + | chr8_2:8362684-8362703 | Msa1232080:intron | 40.0% | |
| !! | TTTTGTTTCTTGTCTCCCCA+TGG | - | chr8_2:8362830-8362849 | None:intergenic | 40.0% |
| TGGATCAAAAGAGGATTACC+TGG | + | chr8_2:8363035-8363054 | Msa1232080:CDS | 40.0% | |
| TAATTCCAGTATCATCGTCC+AGG | - | chr8_2:8363056-8363075 | None:intergenic | 40.0% | |
| GAAAAAGGGTAATTCTGCAG+TGG | - | chr8_2:8363133-8363152 | None:intergenic | 40.0% | |
| ACAATGAGATGGTTTCCAGA+AGG | + | chr8_2:8363177-8363196 | Msa1232080:CDS | 40.0% | |
| TAGCAATTCCTTTCTCCTTC+TGG | - | chr8_2:8363195-8363214 | None:intergenic | 40.0% | |
| TTTCGGTCCTCCTTATATGA+CGG | + | chr8_2:8363355-8363374 | Msa1232080:intron | 40.0% | |
| ATGATCTCCGTCATATAAGG+AGG | - | chr8_2:8363365-8363384 | None:intergenic | 40.0% | |
| GCAAGGAATTGTTGAACCAT+TGG | - | chr8_2:8363429-8363448 | None:intergenic | 40.0% | |
| TTAACATGAGCTGATGAGTC+TGG | - | chr8_2:8363493-8363512 | None:intergenic | 40.0% | |
| TCATGAAATAGTAGCAACGG+AGG | - | chr8_2:8363530-8363549 | None:intergenic | 40.0% | |
| AAAAAGTTATCGGGTGACGA+AGG | - | chr8_2:8363584-8363603 | None:intergenic | 40.0% | |
| GAGAAGAATTCGGTACGTAT+AGG | + | chr8_2:8363932-8363951 | Msa1232080:intron | 40.0% | |
| GAAGAATTCGGTACGTATAG+GGG | + | chr8_2:8363934-8363953 | Msa1232080:intron | 40.0% | |
| AAATGAATCACCATGAGCTG+AGG | - | chr8_2:8364106-8364125 | None:intergenic | 40.0% | |
| ! | CCGCTGATTGGTTGAAAAAA+AGG | - | chr8_2:8364151-8364170 | None:intergenic | 40.0% |
| CGATTGACTGATCTGAACAA+AGG | - | chr8_2:8364337-8364356 | None:intergenic | 40.0% | |
| GACTGCATTCCTCATTACTT+CGG | - | chr8_2:8364509-8364528 | None:intergenic | 40.0% | |
| ! | GCGTGCATTTAGGATTAAGG+TGG | - | chr8_2:8360649-8360668 | None:intergenic | 45.0% |
| TGCACGCATATTGCTTGTCT+TGG | + | chr8_2:8360662-8360681 | Msa1232080:CDS | 45.0% | |
| TCTGCAGTTGTATTGGGGTT+TGG | - | chr8_2:8361397-8361416 | None:intergenic | 45.0% | |
| TCGCGATCGAGCTGAAAATT+TGG | - | chr8_2:8361433-8361452 | None:intergenic | 45.0% | |
| !! | CATTTTGATGGTTGTTGGGG+GGG | - | chr8_2:8361508-8361527 | None:intergenic | 45.0% |
| !! | CCATTTTGATGGTTGTTGGG+GGG | - | chr8_2:8361509-8361528 | None:intergenic | 45.0% |
| TGGTGTCTTATCTGGTGAAC+CGG | - | chr8_2:8361643-8361662 | None:intergenic | 45.0% | |
| TCTCTACTGCTGCTAGATCT+TGG | - | chr8_2:8361989-8362008 | None:intergenic | 45.0% | |
| AGATCTAGCAGCAGTAGAGA+TGG | + | chr8_2:8361989-8362008 | Msa1232080:intron | 45.0% | |
| !!! | TGGTGGTGAGTTTTTGGTTG+TGG | - | chr8_2:8362112-8362131 | None:intergenic | 45.0% |
| ! | TGGTGTGTCTTTTTGTGTGG+TGG | - | chr8_2:8362129-8362148 | None:intergenic | 45.0% |
| !! | GCGTTGGTAACATAAGATGG+TGG | - | chr8_2:8362185-8362204 | None:intergenic | 45.0% |
| ATGTTGGGAACATAAGGTGG+TGG | - | chr8_2:8362252-8362271 | None:intergenic | 45.0% | |
| CTGATGTTGGGAACATAAGG+TGG | - | chr8_2:8362255-8362274 | None:intergenic | 45.0% | |
| TGGCTGATGTTGGGAACATA+AGG | - | chr8_2:8362258-8362277 | None:intergenic | 45.0% | |
| GAGGTTGAACTAAGTTCCGT+TGG | + | chr8_2:8362464-8362483 | Msa1232080:intron | 45.0% | |
| GATTACCTGGACGATGATAC+TGG | + | chr8_2:8363048-8363067 | Msa1232080:CDS | 45.0% | |
| GACGAAGGATTTGTGGAAAC+AGG | + | chr8_2:8363087-8363106 | Msa1232080:CDS | 45.0% | |
| GATGGTTTCCAGAAGGAGAA+AGG | + | chr8_2:8363184-8363203 | Msa1232080:CDS | 45.0% | |
| GAGCTGATGAGTCTGGTAAA+TGG | - | chr8_2:8363486-8363505 | None:intergenic | 45.0% | |
| TACGCGACAGGAGAAGAATT+CGG | + | chr8_2:8363922-8363941 | Msa1232080:intron | 45.0% | |
| ! | CGTATAGGGGTATAGAGCTT+CGG | + | chr8_2:8363947-8363966 | Msa1232080:intron | 45.0% |
| AAAGCATGGTTACCGCTGAT+TGG | - | chr8_2:8364163-8364182 | None:intergenic | 45.0% | |
| AATCAGCGGTAACCATGCTT+TGG | + | chr8_2:8364162-8364181 | Msa1232080:intron | 45.0% | |
| TAACCATGCTTTGGTACGCT+TGG | + | chr8_2:8364171-8364190 | Msa1232080:intron | 45.0% | |
| ! | AGTACCGAATTCGGGTACTT+CGG | - | chr8_2:8364223-8364242 | None:intergenic | 45.0% |
| !! | TGGTACGTGAGTACCGAATT+CGG | - | chr8_2:8364232-8364251 | None:intergenic | 45.0% |
| TATGGCCTATCAACATCCCA+TGG | + | chr8_2:8364383-8364402 | Msa1232080:intron | 45.0% | |
| AGACTCCATGGGATGTTGAT+AGG | - | chr8_2:8364391-8364410 | None:intergenic | 45.0% | |
| GCATTCCTCATTACTTCGGA+TGG | - | chr8_2:8364505-8364524 | None:intergenic | 45.0% | |
| TAATACTCATCAGTCTCGGC+AGG | - | chr8_2:8364604-8364623 | None:intergenic | 45.0% | |
| !!! | AATTAGTTTTTTTTTTTTTA+AGG | + | chr8_2:8360882-8360901 | Msa1232080:intron | 5.0% |
| !!! | AAATGTTTATATTTTTTTAA+CGG | + | chr8_2:8361148-8361167 | Msa1232080:intron | 5.0% |
| !!! | TATATTGATTAAAATTTATA+CGG | - | chr8_2:8363781-8363800 | None:intergenic | 5.0% |
| TCTATGTTCGTCTTGCGTCG+AGG | - | chr8_2:8361196-8361215 | None:intergenic | 50.0% | |
| GACGCAAGACGAACATAGAC+CGG | + | chr8_2:8361197-8361216 | Msa1232080:intron | 50.0% | |
| CCCCCCAACAACCATCAAAA+TGG | + | chr8_2:8361506-8361525 | Msa1232080:intron | 50.0% | |
| TGTCTTATCTGGTGAACCGG+GGG | - | chr8_2:8361640-8361659 | None:intergenic | 50.0% | |
| GTGTCTTATCTGGTGAACCG+GGG | - | chr8_2:8361641-8361660 | None:intergenic | 50.0% | |
| GGTGTCTTATCTGGTGAACC+GGG | - | chr8_2:8361642-8361661 | None:intergenic | 50.0% | |
| ! | TGGATTGGATTCTTGCGGGT+CGG | - | chr8_2:8361848-8361867 | None:intergenic | 50.0% |
| CAGTAGAGATGGACCCAGAT+CGG | + | chr8_2:8362000-8362019 | Msa1232080:intron | 50.0% | |
| !! | GTGGTTGTTGGTGTTGAGGT+GGG | - | chr8_2:8362166-8362185 | None:intergenic | 50.0% |
| !! | GATGGTGGTTGTTGGTGTTG+AGG | - | chr8_2:8362170-8362189 | None:intergenic | 50.0% |
| ATGTGAGTCGTTGTTGGCGT+TGG | - | chr8_2:8362201-8362220 | None:intergenic | 50.0% | |
| ACGGTGATGTGAGTCGTTGT+TGG | - | chr8_2:8362207-8362226 | None:intergenic | 50.0% | |
| ! | GAACATAAGGTGGTGGTTGC+TGG | - | chr8_2:8362245-8362264 | None:intergenic | 50.0% |
| ACTGCGATGTGGCTGATGTT+GGG | - | chr8_2:8362267-8362286 | None:intergenic | 50.0% | |
| AACTGCGATGTGGCTGATGT+TGG | - | chr8_2:8362268-8362287 | None:intergenic | 50.0% | |
| !! | AGCTAGGCTGCATCGATTAG+AGG | + | chr8_2:8362445-8362464 | Msa1232080:intron | 50.0% |
| AAGTTATCGGGTGACGAAGG+CGG | - | chr8_2:8363581-8363600 | None:intergenic | 50.0% | |
| TATAGAGCTTCGGTACGCTC+CGG | + | chr8_2:8363957-8363976 | Msa1232080:intron | 50.0% | |
| GAACCAAGCGTACCAAAGCA+TGG | - | chr8_2:8364177-8364196 | None:intergenic | 50.0% | |
| ATTCGGGTACTTCGGCGTAT+TGG | - | chr8_2:8364215-8364234 | None:intergenic | 50.0% | |
| ! | TACGCCGAAGTACCCGAATT+CGG | + | chr8_2:8364216-8364235 | Msa1232080:intron | 50.0% |
| !! | GGTACGTGAGTACCGAATTC+GGG | - | chr8_2:8364231-8364250 | None:intergenic | 50.0% |
| TCAAACTGTGACGCATCCGT+TGG | + | chr8_2:8364423-8364442 | Msa1232080:CDS | 50.0% | |
| TGTGACGCATCCGTTGGAAT+TGG | + | chr8_2:8364429-8364448 | Msa1232080:CDS | 50.0% | |
| TAGAGATGGACCCAGATCGG+AGG | + | chr8_2:8362003-8362022 | Msa1232080:intron | 55.0% | |
| ACCCAGATCGGAGGTCACTA+CGG | + | chr8_2:8362012-8362031 | Msa1232080:intron | 55.0% | |
| TCCGTAGTGACCTCCGATCT+GGG | - | chr8_2:8362016-8362035 | None:intergenic | 55.0% | |
| !! | GGTGGTTGTTGGTGTTGAGG+TGG | - | chr8_2:8362167-8362186 | None:intergenic | 55.0% |
| GGGAGGTAATTGTGTTGGGG+TGG | - | chr8_2:8362385-8362404 | None:intergenic | 55.0% | |
| TCGCAGTTCGTTCCAGTACG+CGG | + | chr8_2:8363880-8363899 | Msa1232080:intron | 55.0% | |
| GTTCGTTCCAGTACGCGGTA+CGG | + | chr8_2:8363885-8363904 | Msa1232080:intron | 55.0% | |
| TTCGTTCCAGTACGCGGTAC+GGG | + | chr8_2:8363886-8363905 | Msa1232080:intron | 55.0% | |
| CTCACTCAGTCCTCAGCTCA+TGG | + | chr8_2:8364093-8364112 | Msa1232080:intron | 55.0% | |
| ! | CTTTGGTACGCTTGGTTCGC+TGG | + | chr8_2:8364179-8364198 | Msa1232080:intron | 55.0% |
| TCATCAGTCTCGGCAGGATC+AGG | - | chr8_2:8364598-8364617 | None:intergenic | 55.0% | |
| GTTCGTCTTGCGTCGAGGCT+TGG | - | chr8_2:8361191-8361210 | None:intergenic | 60.0% | |
| TTCCACCACCAATCGACCCC+CGG | + | chr8_2:8361621-8361640 | Msa1232080:intron | 60.0% | |
| GTCCGTAGTGACCTCCGATC+TGG | - | chr8_2:8362017-8362036 | None:intergenic | 60.0% | |
| GGGTGACGAAGGCGGTTGAA+AGG | - | chr8_2:8363573-8363592 | None:intergenic | 60.0% | |
| TCCAGTACGCGGTACGGGTA+CGG | + | chr8_2:8363891-8363910 | Msa1232080:intron | 60.0% | |
| TCAGTCTCGGCAGGATCAGG+AGG | - | chr8_2:8364595-8364614 | None:intergenic | 60.0% | |
| AACCGGGGGTCGATTGGTGG+TGG | - | chr8_2:8361626-8361645 | None:intergenic | 65.0% | |
| GTGAACCGGGGGTCGATTGG+TGG | - | chr8_2:8361629-8361648 | None:intergenic | 65.0% | |
| CTGGTGAACCGGGGGTCGAT+TGG | - | chr8_2:8361632-8361651 | None:intergenic | 65.0% | |
| CCAGTACGCGGTACGGGTAC+GGG | + | chr8_2:8363892-8363911 | Msa1232080:intron | 65.0% | |
| CCCGTACCCGTACCGCGTAC+TGG | - | chr8_2:8363895-8363914 | None:intergenic | 70.0% | |
| GCGGTACGGGTACGGGTTCG+CGG | + | chr8_2:8363899-8363918 | Msa1232080:intron | 70.0% | |
| ACGGGTTCGCGGTACGCGAC+AGG | + | chr8_2:8363910-8363929 | Msa1232080:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 8360621 | 8364633 | 8360621 | ID=Msa1232080;Name=Msa1232080 |
| chr8_2 | mRNA | 8360621 | 8364633 | 8360621 | ID=Msa1232080-mRNA-1;Parent=Msa1232080;Name=Msa1232080-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|0.5|0.66|3|0|200 |
| chr8_2 | exon | 8360621 | 8360765 | 8360621 | ID=Msa1232080-mRNA-1:exon:3227;Parent=Msa1232080-mRNA-1 |
| chr8_2 | exon | 8363016 | 8363247 | 8363016 | ID=Msa1232080-mRNA-1:exon:3228;Parent=Msa1232080-mRNA-1 |
| chr8_2 | exon | 8364408 | 8364633 | 8364408 | ID=Msa1232080-mRNA-1:exon:3229;Parent=Msa1232080-mRNA-1 |
| chr8_2 | CDS | 8360621 | 8360765 | 8360621 | ID=Msa1232080-mRNA-1:cds;Parent=Msa1232080-mRNA-1 |
| chr8_2 | CDS | 8363016 | 8363247 | 8363016 | ID=Msa1232080-mRNA-1:cds;Parent=Msa1232080-mRNA-1 |
| chr8_2 | CDS | 8364408 | 8364633 | 8364408 | ID=Msa1232080-mRNA-1:cds;Parent=Msa1232080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
