Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232220 | GAU50549.1 | 66.964 | 448 | 86 | 6 | 1 | 393 | 1 | 441 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232220 | sp|Q9SZL8|FRS5_ARATH | 45.122 | 164 | 90 | 0 | 105 | 268 | 434 | 597 | 2.26e-39 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232220 | A0A2Z6PSQ9 | 66.964 | 448 | 86 | 6 | 1 | 393 | 1 | 441 | 0.0 | 556 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1232220 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014710 | Msa1232220 | 0.804976 | 1.667976e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232220 | MtrunA17_Chr1g0202341 | 71.119 | 277 | 50 | 1 | 105 | 351 | 409 | 685 | 1.69e-130 | 395 |
| Msa1232220 | MtrunA17_Chr1g0202341 | 62.136 | 103 | 37 | 1 | 4 | 104 | 12 | 114 | 5.01e-32 | 130 |
| Msa1232220 | MtrunA17_Chr5g0448761 | 36.667 | 270 | 128 | 4 | 105 | 338 | 425 | 687 | 1.71e-45 | 170 |
| Msa1232220 | MtrunA17_Chr5g0448511 | 31.835 | 267 | 145 | 4 | 105 | 338 | 197 | 459 | 1.11e-38 | 148 |
| Msa1232220 | MtrunA17_Chr3g0077241 | 70.652 | 92 | 21 | 2 | 6 | 94 | 1 | 89 | 1.25e-35 | 129 |
| Msa1232220 | MtrunA17_Chr3g0118611 | 27.394 | 376 | 214 | 9 | 105 | 428 | 303 | 671 | 8.12e-32 | 130 |
| Msa1232220 | MtrunA17_Chr5g0440451 | 30.370 | 270 | 141 | 6 | 105 | 338 | 406 | 664 | 2.29e-29 | 122 |
| Msa1232220 | MtrunA17_Chr4g0052331 | 57.895 | 95 | 38 | 1 | 1 | 93 | 1 | 95 | 9.77e-29 | 109 |
| Msa1232220 | MtrunA17_Chr3g0080351 | 28.958 | 259 | 143 | 4 | 105 | 331 | 424 | 673 | 2.49e-26 | 113 |
| Msa1232220 | MtrunA17_Chr1g0207551 | 35.185 | 162 | 104 | 1 | 107 | 268 | 392 | 552 | 4.32e-25 | 109 |
| Msa1232220 | MtrunA17_Chr6g0477261 | 37.870 | 169 | 96 | 4 | 107 | 268 | 241 | 407 | 2.76e-23 | 103 |
| Msa1232220 | MtrunA17_Chr2g0329031 | 26.048 | 334 | 195 | 8 | 105 | 396 | 363 | 686 | 5.12e-23 | 103 |
| Msa1232220 | MtrunA17_Chr2g0296781 | 43.860 | 114 | 64 | 0 | 107 | 220 | 352 | 465 | 1.40e-22 | 101 |
| Msa1232220 | MtrunA17_Chr5g0441581 | 43.103 | 116 | 66 | 0 | 105 | 220 | 378 | 493 | 4.01e-22 | 100 |
| Msa1232220 | MtrunA17_Chr1g0198761 | 26.115 | 314 | 183 | 6 | 109 | 392 | 420 | 714 | 2.46e-21 | 97.8 |
| Msa1232220 | MtrunA17_Chr1g0196541 | 40.945 | 127 | 74 | 1 | 105 | 231 | 350 | 475 | 4.36e-21 | 97.1 |
| Msa1232220 | MtrunA17_Chr2g0287061 | 36.585 | 164 | 100 | 2 | 106 | 268 | 504 | 664 | 1.88e-20 | 95.1 |
| Msa1232220 | MtrunA17_Chr2g0291581 | 25.182 | 274 | 168 | 5 | 107 | 345 | 416 | 687 | 4.65e-20 | 94.0 |
| Msa1232220 | MtrunA17_Chr8g0363841 | 32.597 | 181 | 116 | 3 | 92 | 266 | 358 | 538 | 1.66e-18 | 89.0 |
| Msa1232220 | MtrunA17_Chr2g0276841 | 30.435 | 161 | 107 | 2 | 107 | 267 | 436 | 591 | 8.77e-15 | 77.4 |
| Msa1232220 | MtrunA17_Chr6g0458391 | 29.012 | 162 | 114 | 1 | 105 | 266 | 566 | 726 | 1.78e-14 | 76.3 |
| Msa1232220 | MtrunA17_Chr5g0407081 | 83.721 | 43 | 7 | 0 | 475 | 517 | 576 | 618 | 2.26e-14 | 76.3 |
| Msa1232220 | MtrunA17_Chr2g0291591 | 30.556 | 144 | 99 | 1 | 107 | 249 | 419 | 562 | 5.33e-14 | 74.7 |
| Msa1232220 | MtrunA17_Chr2g0287651 | 26.829 | 164 | 119 | 1 | 106 | 268 | 432 | 595 | 7.45e-14 | 74.7 |
| Msa1232220 | MtrunA17_Chr2g0324011 | 27.711 | 166 | 110 | 4 | 106 | 266 | 369 | 529 | 3.69e-13 | 72.0 |
| Msa1232220 | MtrunA17_Chr2g0294841 | 25.610 | 164 | 118 | 1 | 105 | 268 | 412 | 571 | 1.41e-12 | 70.5 |
| Msa1232220 | MtrunA17_Chr2g0308841 | 26.061 | 165 | 115 | 3 | 106 | 266 | 27 | 188 | 1.99e-12 | 67.8 |
| Msa1232220 | MtrunA17_Chr3g0082121 | 33.962 | 106 | 69 | 1 | 106 | 210 | 395 | 500 | 3.96e-12 | 68.9 |
| Msa1232220 | MtrunA17_Chr2g0329361 | 42.424 | 66 | 38 | 0 | 39 | 104 | 59 | 124 | 1.13e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1232220 | AT4G38180.1 | 45.122 | 164 | 90 | 0 | 105 | 268 | 434 | 597 | 2.30e-40 | 155 |
| Msa1232220 | AT4G38170.1 | 27.937 | 315 | 194 | 5 | 106 | 393 | 200 | 508 | 2.81e-31 | 127 |
| Msa1232220 | AT2G27110.3 | 28.736 | 261 | 150 | 3 | 105 | 335 | 236 | 490 | 6.62e-30 | 124 |
| Msa1232220 | AT2G27110.2 | 28.736 | 261 | 150 | 3 | 105 | 335 | 381 | 635 | 8.35e-30 | 124 |
| Msa1232220 | AT2G27110.1 | 28.736 | 261 | 150 | 3 | 105 | 335 | 381 | 635 | 8.35e-30 | 124 |
| Msa1232220 | AT5G18960.2 | 29.259 | 270 | 136 | 6 | 105 | 335 | 531 | 784 | 5.41e-25 | 109 |
| Msa1232220 | AT5G18960.1 | 29.259 | 270 | 136 | 6 | 105 | 335 | 531 | 784 | 5.41e-25 | 109 |
| Msa1232220 | AT4G15090.1 | 26.855 | 283 | 165 | 5 | 106 | 353 | 411 | 686 | 6.06e-25 | 109 |
| Msa1232220 | AT4G15090.5 | 26.855 | 283 | 165 | 5 | 106 | 353 | 411 | 686 | 6.06e-25 | 109 |
| Msa1232220 | AT4G15090.3 | 26.855 | 283 | 165 | 5 | 106 | 353 | 411 | 686 | 6.06e-25 | 109 |
| Msa1232220 | AT4G15090.2 | 26.855 | 283 | 165 | 5 | 106 | 353 | 411 | 686 | 6.06e-25 | 109 |
| Msa1232220 | AT4G15090.4 | 26.855 | 283 | 165 | 5 | 106 | 353 | 411 | 686 | 6.06e-25 | 109 |
| Msa1232220 | AT3G22170.2 | 26.070 | 257 | 152 | 3 | 106 | 332 | 420 | 668 | 8.70e-25 | 109 |
| Msa1232220 | AT3G22170.1 | 26.070 | 257 | 152 | 3 | 106 | 332 | 420 | 668 | 8.70e-25 | 109 |
| Msa1232220 | AT3G06250.2 | 28.519 | 270 | 138 | 6 | 105 | 335 | 507 | 760 | 9.03e-24 | 105 |
| Msa1232220 | AT3G06250.1 | 28.519 | 270 | 138 | 6 | 105 | 335 | 507 | 760 | 9.03e-24 | 105 |
| Msa1232220 | AT3G06250.3 | 28.519 | 270 | 138 | 6 | 105 | 335 | 507 | 760 | 9.03e-24 | 105 |
| Msa1232220 | AT1G76320.1 | 25.385 | 260 | 155 | 4 | 105 | 334 | 347 | 597 | 1.92e-19 | 92.4 |
| Msa1232220 | AT1G76320.4 | 25.385 | 260 | 155 | 4 | 105 | 334 | 347 | 597 | 1.92e-19 | 92.4 |
| Msa1232220 | AT1G76320.2 | 25.385 | 260 | 155 | 4 | 105 | 334 | 347 | 597 | 1.97e-19 | 92.4 |
| Msa1232220 | AT1G76320.3 | 25.385 | 260 | 155 | 4 | 105 | 334 | 347 | 597 | 2.07e-19 | 92.4 |
| Msa1232220 | AT4G19990.1 | 30.811 | 185 | 117 | 4 | 89 | 268 | 287 | 465 | 2.46e-19 | 92.0 |
| Msa1232220 | AT4G19990.3 | 30.811 | 185 | 117 | 4 | 89 | 268 | 344 | 522 | 3.01e-19 | 92.0 |
| Msa1232220 | AT4G19990.4 | 30.811 | 185 | 117 | 4 | 89 | 268 | 344 | 522 | 3.01e-19 | 92.0 |
| Msa1232220 | AT4G19990.5 | 30.811 | 185 | 117 | 4 | 89 | 268 | 344 | 522 | 3.22e-19 | 91.7 |
| Msa1232220 | AT4G19990.7 | 30.811 | 185 | 117 | 4 | 89 | 268 | 358 | 536 | 3.36e-19 | 91.7 |
| Msa1232220 | AT4G19990.6 | 30.811 | 185 | 117 | 4 | 89 | 268 | 344 | 522 | 4.38e-19 | 91.3 |
| Msa1232220 | AT4G19990.2 | 30.811 | 185 | 117 | 4 | 89 | 268 | 344 | 522 | 4.38e-19 | 91.3 |
| Msa1232220 | AT2G32250.6 | 31.707 | 164 | 109 | 3 | 106 | 268 | 355 | 516 | 9.74e-19 | 90.5 |
| Msa1232220 | AT2G32250.1 | 31.707 | 164 | 109 | 3 | 106 | 268 | 355 | 516 | 9.74e-19 | 90.5 |
| Msa1232220 | AT2G32250.3 | 31.707 | 164 | 109 | 3 | 106 | 268 | 355 | 516 | 9.74e-19 | 90.5 |
| Msa1232220 | AT2G32250.2 | 31.707 | 164 | 109 | 3 | 106 | 268 | 355 | 516 | 9.90e-19 | 90.5 |
| Msa1232220 | AT2G32250.4 | 31.707 | 164 | 109 | 3 | 106 | 268 | 355 | 516 | 9.90e-19 | 90.5 |
| Msa1232220 | AT2G32250.5 | 31.707 | 164 | 109 | 3 | 106 | 268 | 355 | 516 | 1.08e-18 | 90.1 |
| Msa1232220 | AT2G32250.8 | 31.707 | 164 | 109 | 3 | 106 | 268 | 314 | 475 | 1.08e-18 | 90.1 |
| Msa1232220 | AT2G32250.7 | 31.707 | 164 | 109 | 3 | 106 | 268 | 314 | 475 | 1.18e-18 | 90.1 |
| Msa1232220 | AT1G52520.1 | 23.221 | 267 | 164 | 5 | 111 | 339 | 436 | 699 | 1.05e-17 | 87.0 |
| Msa1232220 | AT1G80010.1 | 22.140 | 271 | 178 | 6 | 106 | 344 | 456 | 725 | 6.90e-15 | 78.2 |
| Msa1232220 | AT1G10240.2 | 30.172 | 116 | 81 | 0 | 105 | 220 | 412 | 527 | 2.87e-12 | 69.7 |
| Msa1232220 | AT1G10240.1 | 30.172 | 116 | 81 | 0 | 105 | 220 | 412 | 527 | 2.87e-12 | 69.7 |
| Msa1232220 | AT5G28530.1 | 27.160 | 162 | 110 | 3 | 106 | 266 | 428 | 582 | 2.92e-11 | 66.6 |
| Msa1232220 | AT5G28530.4 | 27.160 | 162 | 110 | 3 | 106 | 266 | 365 | 519 | 3.48e-11 | 66.2 |
Find 104 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTCTGCGATAAATATT+TGG | 0.074822 | 8_2:+8510491 | None:intergenic |
| TCTGGTGTGATTTCAGATTT+TGG | 0.165437 | 8_2:-8509482 | Msa1232220:CDS |
| TGCTGGATCACACAAATTTA+TGG | 0.194971 | 8_2:+8509978 | None:intergenic |
| TTCATTATTTAATAGTATTA+TGG | 0.222727 | 8_2:-8510175 | Msa1232220:CDS |
| TTTGTCTTTCTTAGCATTTA+TGG | 0.224272 | 8_2:+8510254 | None:intergenic |
| CATTCCTTCAAAGGGCTCTA+AGG | 0.241653 | 8_2:+8511870 | None:intergenic |
| GAAGAAGATTATGGAAGTTT+TGG | 0.293650 | 8_2:-8512283 | Msa1232220:five_prime_UTR |
| AAAGTACGTGGACGACCTTT+AGG | 0.294239 | 8_2:+8509946 | None:intergenic |
| CCATTCGCTGCTAAAGGATT+TGG | 0.297821 | 8_2:-8508124 | Msa1232220:CDS |
| TCAAAGGTGGTGGGTTTCTC+TGG | 0.316993 | 8_2:-8509500 | Msa1232220:CDS |
| TTTCTCTGCGATAAATATTT+GGG | 0.322581 | 8_2:+8510492 | None:intergenic |
| GCAGTGTTCATGAAGACTTT+TGG | 0.334930 | 8_2:-8506950 | Msa1232220:CDS |
| CTCGGTTTCTGCCTTCTTCA+AGG | 0.341954 | 8_2:+8510208 | None:intergenic |
| AGAACGGATGGTAGGGTAAT+TGG | 0.353327 | 8_2:-8511754 | Msa1232220:CDS |
| CATACTGATGCAGTACTTAG+AGG | 0.353667 | 8_2:+8506975 | None:intergenic |
| TGAAAAGTCACATGATAGTT+AGG | 0.355149 | 8_2:+8510412 | None:intergenic |
| AAGTACGTGGACGACCTTTA+GGG | 0.355782 | 8_2:+8509947 | None:intergenic |
| GAATTAACAAACTCTTCATT+TGG | 0.362566 | 8_2:+8510039 | None:intergenic |
| TTTACGAATGAAAGGCAGTT+TGG | 0.366602 | 8_2:-8509926 | Msa1232220:CDS |
| GACAAATCAGGAGTTGATAT+TGG | 0.366622 | 8_2:+8506906 | None:intergenic |
| CAGTGTTAAAGCTTCTAGTT+AGG | 0.374530 | 8_2:-8509684 | Msa1232220:CDS |
| ACAAGGTACGCGAGGAATAA+AGG | 0.387113 | 8_2:-8511811 | Msa1232220:CDS |
| GATCACACAAATTTATGGTT+TGG | 0.392636 | 8_2:+8509983 | None:intergenic |
| TCGACAAAACTATCCTTTAG+TGG | 0.405205 | 8_2:+8509525 | None:intergenic |
| CTTCTTCGAAGACGGTTCTC+AGG | 0.409782 | 8_2:+8512299 | None:intergenic |
| AATCACAAAACTTGATCAAT+TGG | 0.417160 | 8_2:-8510073 | Msa1232220:CDS |
| TTTGCGCACTTTATATCCTA+TGG | 0.426133 | 8_2:-8510581 | Msa1232220:CDS |
| GTTTGGTCGTCGGAGACTTT+AGG | 0.428260 | 8_2:+8510000 | None:intergenic |
| TTCTAGTTAGGTTGATTAAG+AGG | 0.429239 | 8_2:-8509672 | Msa1232220:intron |
| CAGACCTGCTTTGCCACTAA+AGG | 0.433153 | 8_2:-8509538 | Msa1232220:CDS |
| CATGAACATACCAACATGAT+TGG | 0.442395 | 8_2:-8511955 | Msa1232220:CDS |
| CTATCCTTTAGTGGCAAAGC+AGG | 0.446607 | 8_2:+8509534 | None:intergenic |
| TTTCTGCCATTCGCTGCTAA+AGG | 0.450551 | 8_2:-8508130 | Msa1232220:CDS |
| TTTAGGTGTGATATCATCAA+TGG | 0.453788 | 8_2:-8509722 | Msa1232220:intron |
| TGTAAACTTCATTCCTTCAA+AGG | 0.454434 | 8_2:+8511861 | None:intergenic |
| TGGTCTGAGACATTATAAAC+AGG | 0.455253 | 8_2:-8512263 | Msa1232220:intron |
| ACCGTCTTCGAAGAAGATTA+TGG | 0.460480 | 8_2:-8512292 | Msa1232220:five_prime_UTR |
| GTAAACTTCATTCCTTCAAA+GGG | 0.460886 | 8_2:+8511862 | None:intergenic |
| GCTGTTTGTGTTGAAGCTGC+AGG | 0.463453 | 8_2:-8508187 | Msa1232220:CDS |
| AAAAGTGTTCAAGATATTCC+AGG | 0.469314 | 8_2:-8510530 | Msa1232220:CDS |
| ATATTGCAATTCAAGCTTTG+CGG | 0.469966 | 8_2:-8510101 | Msa1232220:CDS |
| TATCATCTCGAGGACAAATC+AGG | 0.471407 | 8_2:+8506894 | None:intergenic |
| ATTCCTTCAAAGGGCTCTAA+GGG | 0.472871 | 8_2:+8511871 | None:intergenic |
| CAAATTTATGGTTTGGTCGT+CGG | 0.480828 | 8_2:+8509990 | None:intergenic |
| TTTGAAGCCTCTTCTTCCAT+AGG | 0.482226 | 8_2:+8510565 | None:intergenic |
| CTCCCCTTAGAGCCCTTTGA+AGG | 0.489876 | 8_2:-8511874 | Msa1232220:CDS |
| TCTTAGCATTTATGGTCCAT+CGG | 0.492991 | 8_2:+8510262 | None:intergenic |
| CAAGATATTCCAGGATGAGT+TGG | 0.493978 | 8_2:-8510521 | Msa1232220:CDS |
| AGGAATCCACTTTGCTCGAA+TGG | 0.497362 | 8_2:+8510798 | None:intergenic |
| ACGAGTTGCAAGATAACAAA+TGG | 0.498356 | 8_2:-8510837 | Msa1232220:CDS |
| TCAATACAACAAAACTCAAT+CGG | 0.499836 | 8_2:-8512421 | Msa1232220:five_prime_UTR |
| GGGATCCAACCAACTCATCC+TGG | 0.504100 | 8_2:+8510512 | None:intergenic |
| TCAAGAGATTCTTTGTTCAA+AGG | 0.507548 | 8_2:-8511731 | Msa1232220:CDS |
| GGCTCTAAGGGGAGCTCCAA+TGG | 0.508044 | 8_2:+8511883 | None:intergenic |
| TTTGTCGAACTCAAAGGTGG+TGG | 0.509167 | 8_2:-8509510 | Msa1232220:CDS |
| CATACTTTCACTCCTTTGAG+TGG | 0.512940 | 8_2:+8510738 | None:intergenic |
| ATTGGAATTAAATATTCAGT+TGG | 0.514043 | 8_2:+8506924 | None:intergenic |
| TTTATATCCTATGGAAGAAG+AGG | 0.514709 | 8_2:-8510572 | Msa1232220:CDS |
| TCCATAATCTTCTTCGAAGA+CGG | 0.517402 | 8_2:+8512291 | None:intergenic |
| TGTGTCACAAACTTGCTCAA+TGG | 0.518813 | 8_2:+8510679 | None:intergenic |
| AGATTCTTTGTTCAAAGGAG+GGG | 0.523644 | 8_2:-8511726 | Msa1232220:CDS |
| GCAATTGAAGACCTTGAAGA+AGG | 0.526963 | 8_2:-8510219 | Msa1232220:CDS |
| GGATATAAAGTGCGCAAAAG+TGG | 0.527400 | 8_2:+8510586 | None:intergenic |
| ATAATGAAGTACTTGAAGCT+CGG | 0.527608 | 8_2:+8510190 | None:intergenic |
| TCTCAATGATAGACTACCAT+TGG | 0.530176 | 8_2:-8511899 | Msa1232220:CDS |
| CTAACTAGAAGCTTTAACAC+TGG | 0.536647 | 8_2:+8509685 | None:intergenic |
| AATTTCATGAATCTTGTATG+TGG | 0.536832 | 8_2:+8510447 | None:intergenic |
| TAAATCAAGAACGGATGGTA+GGG | 0.537380 | 8_2:-8511761 | Msa1232220:CDS |
| GCTAAGAAAGACAAAAGTAA+AGG | 0.538204 | 8_2:-8510246 | Msa1232220:CDS |
| CCAGCACGTGCTGTCCCTAA+AGG | 0.538600 | 8_2:-8509961 | Msa1232220:CDS |
| GAGATTCTTTGTTCAAAGGA+GGG | 0.539548 | 8_2:-8511727 | Msa1232220:CDS |
| CTTCGAAGACGGTTCTCAGG+CGG | 0.541223 | 8_2:+8512302 | None:intergenic |
| CCTTTAGGGACAGCACGTGC+TGG | 0.541388 | 8_2:+8509961 | None:intergenic |
| AGAGATTCTTTGTTCAAAGG+AGG | 0.550163 | 8_2:-8511728 | Msa1232220:CDS |
| ATATTCCAGGATGAGTTGGT+TGG | 0.550283 | 8_2:-8510517 | Msa1232220:CDS |
| CTAAATCAAGAACGGATGGT+AGG | 0.552075 | 8_2:-8511762 | Msa1232220:CDS |
| AAATTGTGACGTACATAAGA+AGG | 0.554526 | 8_2:+8510778 | None:intergenic |
| TTGTCGAACTCAAAGGTGGT+GGG | 0.560817 | 8_2:-8509509 | Msa1232220:CDS |
| CCAAATCCTTTAGCAGCGAA+TGG | 0.562095 | 8_2:+8508124 | None:intergenic |
| TGCAATTCAAGCTTTGCGGA+AGG | 0.564681 | 8_2:-8510097 | Msa1232220:CDS |
| GCCTGGTGTTGCAGGTCTTG+TGG | 0.569096 | 8_2:-8508220 | Msa1232220:intron |
| ACTTTCACTCCTTTGAGTGG+TGG | 0.571944 | 8_2:+8510741 | None:intergenic |
| CGCTGCTAAAGGATTTGGAA+GGG | 0.573494 | 8_2:-8508119 | Msa1232220:intron |
| TCGCACGAACAAAAGAAAGT+AGG | 0.573585 | 8_2:+8512354 | None:intergenic |
| TCTACTCCATTCGAGCAAAG+TGG | 0.594223 | 8_2:-8510804 | Msa1232220:CDS |
| CTGGAATGTCCACCACTCAA+AGG | 0.596579 | 8_2:-8510750 | Msa1232220:CDS |
| CCACGTACTTTACGAATGAA+AGG | 0.600807 | 8_2:-8509934 | Msa1232220:CDS |
| GAGAGAAGAATGTTAAGACA+AGG | 0.601088 | 8_2:-8510618 | Msa1232220:CDS |
| ATCATCTGAGCCAATCATGT+TGG | 0.609119 | 8_2:+8511945 | None:intergenic |
| TCGCTGCTAAAGGATTTGGA+AGG | 0.609849 | 8_2:-8508120 | Msa1232220:CDS |
| GTTACTAAATCAAGAACGGA+TGG | 0.614185 | 8_2:-8511766 | Msa1232220:CDS |
| TTTGTGTTGAAGCTGCAGGA+AGG | 0.615745 | 8_2:-8508183 | Msa1232220:CDS |
| CAACACAAACAGCAGAGCAG+CGG | 0.616751 | 8_2:+8508197 | None:intergenic |
| CCTTTCATTCGTAAAGTACG+TGG | 0.618728 | 8_2:+8509934 | None:intergenic |
| AATGGTAGTCTATCATTGAG+AGG | 0.621900 | 8_2:+8511901 | None:intergenic |
| AATGGCAGAAAATCAGCACC+AGG | 0.634564 | 8_2:+8508142 | None:intergenic |
| TCGTGTTACTAAATCAAGAA+CGG | 0.641576 | 8_2:-8511770 | Msa1232220:CDS |
| GTTTGTGACACAATATGAGA+AGG | 0.645219 | 8_2:-8510668 | Msa1232220:CDS |
| TCTCTTGAACTATCTGAGAG+AGG | 0.647890 | 8_2:-8510147 | Msa1232220:CDS |
| AATACTACACAAGGTACGCG+AGG | 0.651596 | 8_2:-8511819 | Msa1232220:CDS |
| TTCCTTCAAAGGGCTCTAAG+GGG | 0.667518 | 8_2:+8511872 | None:intergenic |
| TCTTGATGCACGTTATAACA+AGG | 0.672143 | 8_2:-8510644 | Msa1232220:CDS |
| GGCACAGCAGTATCATCTCG+AGG | 0.693105 | 8_2:+8506884 | None:intergenic |
| TCTTTAGGAGAACTACACTG+AGG | 0.805453 | 8_2:-8507000 | Msa1232220:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATAAATAAATTAAA+AGG | - | chr8_2:8511564-8511583 | Msa1232220:intron | 0.0% |
| !!! | TTCTTTTTTCAAATTTTTTT+GGG | + | chr8_2:8507647-8507666 | None:intergenic | 10.0% |
| !!! | TTTCTTTTTTCAAATTTTTT+TGG | + | chr8_2:8507648-8507667 | None:intergenic | 10.0% |
| !! | AAAAATTTGAAAAAAGAAAA+TGG | - | chr8_2:8507649-8507668 | Msa1232220:intron | 10.0% |
| !!! | AAGTATGAATAAATTTTTTA+AGG | - | chr8_2:8508618-8508637 | Msa1232220:intron | 10.0% |
| !!! | AGTATGAATAAATTTTTTAA+GGG | - | chr8_2:8508619-8508638 | Msa1232220:intron | 10.0% |
| !! | TTCATTATTTAATAGTATTA+TGG | - | chr8_2:8509165-8509184 | Msa1232220:intron | 10.0% |
| !! | AATAATTAATAACATCTTGT+TGG | + | chr8_2:8507948-8507967 | None:intergenic | 15.0% |
| !!! | TATTTATTTGTTAAGTATGT+TGG | + | chr8_2:8508171-8508190 | None:intergenic | 15.0% |
| !!! | TATTGGTATTATTATTTTGT+TGG | - | chr8_2:8509691-8509710 | Msa1232220:CDS | 15.0% |
| !! | NNNTCACACTAAAAATATTA+AGG | + | chr8_2:8509905-8509924 | None:intergenic | 15.0% |
| !! | TGATCAAAAAAAGAATATAA+TGG | - | chr8_2:8510884-8510903 | Msa1232220:intron | 15.0% |
| !!! | TTTTATTATTACAATGTGAA+AGG | - | chr8_2:8511028-8511047 | Msa1232220:intron | 15.0% |
| !! | TTTATTATTACAATGTGAAA+GGG | - | chr8_2:8511029-8511048 | Msa1232220:intron | 15.0% |
| !!! | CATATCTTTTTTTCTTTTTT+TGG | - | chr8_2:8511798-8511817 | Msa1232220:CDS | 15.0% |
| !! | TTCATATTTAAACATGTTTG+TGG | - | chr8_2:8507214-8507233 | Msa1232220:intron | 20.0% |
| !!! | TTAACTTGCTTTTCTAAATA+TGG | - | chr8_2:8507287-8507306 | Msa1232220:intron | 20.0% |
| !! | ATGTAAAAAAATACTACACA+AGG | - | chr8_2:8507512-8507531 | Msa1232220:intron | 20.0% |
| !!! | AATAAGTTTTTTTTGCACTT+TGG | + | chr8_2:8507836-8507855 | None:intergenic | 20.0% |
| !! | AGACAAAAACAATTAGAAAA+TGG | - | chr8_2:8507979-8507998 | Msa1232220:intron | 20.0% |
| !!! | TAAATTAGCAAATTGCTTTT+GGG | - | chr8_2:8508089-8508108 | Msa1232220:intron | 20.0% |
| !!! | ATATTCTTTTTTTGATCAAG+CGG | + | chr8_2:8510882-8510901 | None:intergenic | 20.0% |
| !!! | AGAGAATTTATTGATAACTT+AGG | - | chr8_2:8510937-8510956 | Msa1232220:intron | 20.0% |
| !!! | TTTGAATTTTTTTGTTTAGC+AGG | - | chr8_2:8511292-8511311 | Msa1232220:intron | 20.0% |
| !!! | TGTCATTTCAAAAAAAAAGT+TGG | - | chr8_2:8511480-8511499 | Msa1232220:intron | 20.0% |
| !! | TTCAATTTCAGATTCAAATT+TGG | - | chr8_2:8511647-8511666 | Msa1232220:intron | 20.0% |
| !! | TCAATTTCAGATTCAAATTT+GGG | - | chr8_2:8511648-8511667 | Msa1232220:intron | 20.0% |
| !! | CATTTGGTTATAATTCTATT+TGG | + | chr8_2:8512084-8512103 | None:intergenic | 20.0% |
| !! | ACTCTGAATGAAAATAAAAA+GGG | - | chr8_2:8512162-8512181 | Msa1232220:intron | 20.0% |
| !! | AAAATGACAAGAAAAATGAA+TGG | - | chr8_2:8512224-8512243 | Msa1232220:intron | 20.0% |
| !! | ATTGGAATTAAATATTCAGT+TGG | + | chr8_2:8512419-8512438 | None:intergenic | 20.0% |
| !!! | ATTGAGTTTTGTTGTATTGA+GGG | + | chr8_2:8506919-8506938 | None:intergenic | 25.0% |
| ! | TCAATACAACAAAACTCAAT+CGG | - | chr8_2:8506919-8506938 | Msa1232220:CDS | 25.0% |
| !!! | CTTTCTCTTTTTTCAATTGA+AGG | - | chr8_2:8506944-8506963 | Msa1232220:CDS | 25.0% |
| !! | GAATTTTTATTCAGCATAAC+AGG | - | chr8_2:8507320-8507339 | Msa1232220:intron | 25.0% |
| ! | TTATTGTACATGATCAAACA+AGG | - | chr8_2:8507677-8507696 | Msa1232220:intron | 25.0% |
| ! | TATTGTACATGATCAAACAA+GGG | - | chr8_2:8507678-8507697 | Msa1232220:intron | 25.0% |
| ! | ATATCAAGAAAAGTGAAGAT+AGG | - | chr8_2:8507722-8507741 | Msa1232220:intron | 25.0% |
| !! | TAAGAAACTGTGAACTTTTT+GGG | + | chr8_2:8507795-8507814 | None:intergenic | 25.0% |
| !! | GTTTTTCTATGCATTTCAAA+TGG | - | chr8_2:8508056-8508075 | Msa1232220:intron | 25.0% |
| !! | GTAAATTAGCAAATTGCTTT+TGG | - | chr8_2:8508088-8508107 | Msa1232220:intron | 25.0% |
| !! | AGAATGGCTTACAAATATTT+TGG | - | chr8_2:8508126-8508145 | Msa1232220:CDS | 25.0% |
| !!! | TTACAAATATTTTGGTGATG+TGG | - | chr8_2:8508134-8508153 | Msa1232220:CDS | 25.0% |
| !! | TGATCAGTGATAATAGTTTT+AGG | + | chr8_2:8508336-8508355 | None:intergenic | 25.0% |
| ! | TTTCTCTGCGATAAATATTT+GGG | + | chr8_2:8508851-8508870 | None:intergenic | 25.0% |
| ! | AATTTCATGAATCTTGTATG+TGG | + | chr8_2:8508896-8508915 | None:intergenic | 25.0% |
| ! | TTTGTCTTTCTTAGCATTTA+TGG | + | chr8_2:8509089-8509108 | None:intergenic | 25.0% |
| ! | AATCACAAAACTTGATCAAT+TGG | - | chr8_2:8509267-8509286 | Msa1232220:intron | 25.0% |
| ! | GAATTAACAAACTCTTCATT+TGG | + | chr8_2:8509304-8509323 | None:intergenic | 25.0% |
| ! | AAATATCAATTGGTACTATC+AGG | + | chr8_2:8510087-8510106 | None:intergenic | 25.0% |
| ! | CCTACAAATCAAATATCAAT+TGG | + | chr8_2:8510097-8510116 | None:intergenic | 25.0% |
| !!! | CCAATTGATATTTGATTTGT+AGG | - | chr8_2:8510094-8510113 | Msa1232220:CDS | 25.0% |
| !!! | GTTTTTACTTTAGTTTTAGC+TGG | - | chr8_2:8510118-8510137 | Msa1232220:CDS | 25.0% |
| ! | ATAAAAGTTGTGCAAAAGAT+CGG | - | chr8_2:8510371-8510390 | Msa1232220:intron | 25.0% |
| !! | ATGGATTGAAACAAATTCTT+TGG | - | chr8_2:8510473-8510492 | Msa1232220:CDS | 25.0% |
| ! | TTGTAACAAAGGTAAAACAA+AGG | + | chr8_2:8510696-8510715 | None:intergenic | 25.0% |
| !! | GTTTTACCTTTGTTACAAAA+TGG | - | chr8_2:8510698-8510717 | Msa1232220:CDS | 25.0% |
| !! | GTATTTCTATATCTTGTACT+CGG | - | chr8_2:8510824-8510843 | Msa1232220:CDS | 25.0% |
| !! | ATAATGGTCTTAAAAAAGTC+AGG | - | chr8_2:8510900-8510919 | Msa1232220:intron | 25.0% |
| ! | GGTATAAGTTAAAAGTAACA+TGG | - | chr8_2:8510958-8510977 | Msa1232220:intron | 25.0% |
| !!! | TTGTTTTTTAATCTGAAACC+TGG | - | chr8_2:8511180-8511199 | Msa1232220:intron | 25.0% |
| ! | AAATTCAAACCTCCTAATAA+AGG | + | chr8_2:8511281-8511300 | None:intergenic | 25.0% |
| ! | CAATTTCAGATTCAAATTTG+GGG | - | chr8_2:8511649-8511668 | Msa1232220:intron | 25.0% |
| ! | AGAAAAATGATTGTTAGCTA+TGG | + | chr8_2:8511709-8511728 | None:intergenic | 25.0% |
| ! | ATGTATTTGACTATTCAACT+AGG | - | chr8_2:8511954-8511973 | Msa1232220:CDS | 25.0% |
| !!! | TTTGATGATGTTCAATCATT+TGG | + | chr8_2:8512100-8512119 | None:intergenic | 25.0% |
| ! | GACTCTGAATGAAAATAAAA+AGG | - | chr8_2:8512161-8512180 | Msa1232220:intron | 25.0% |
| !!! | GATTGAGTTTTGTTGTATTG+AGG | + | chr8_2:8506920-8506939 | None:intergenic | 30.0% |
| ! | GAAGAAGATTATGGAAGTTT+TGG | - | chr8_2:8507057-8507076 | Msa1232220:intron | 30.0% |
| TAACCACATCTTCAATTACT+TGG | - | chr8_2:8507105-8507124 | Msa1232220:intron | 30.0% | |
| AAACCAAGTAATTGAAGATG+TGG | + | chr8_2:8507111-8507130 | None:intergenic | 30.0% | |
| ! | AGTCTCCAAAGATTTTTGTT+TGG | - | chr8_2:8507182-8507201 | Msa1232220:intron | 30.0% |
| CATTGCCAAACAAAAATCTT+TGG | + | chr8_2:8507190-8507209 | None:intergenic | 30.0% | |
| GTAAACTTCATTCCTTCAAA+GGG | + | chr8_2:8507481-8507500 | None:intergenic | 30.0% | |
| TGTAAACTTCATTCCTTCAA+AGG | + | chr8_2:8507482-8507501 | None:intergenic | 30.0% | |
| !!! | TAAAGGTTTTAGCTTTCGTA+TGG | - | chr8_2:8507546-8507565 | Msa1232220:intron | 30.0% |
| !!! | AAAGGTTTTAGCTTTCGTAT+GGG | - | chr8_2:8507547-8507566 | Msa1232220:intron | 30.0% |
| ! | TCGTGTTACTAAATCAAGAA+CGG | - | chr8_2:8507570-8507589 | Msa1232220:intron | 30.0% |
| TCAAGAGATTCTTTGTTCAA+AGG | - | chr8_2:8507609-8507628 | Msa1232220:intron | 30.0% | |
| ! | AAGAAACTGTGAACTTTTTG+GGG | + | chr8_2:8507794-8507813 | None:intergenic | 30.0% |
| ! | CTAAGAAACTGTGAACTTTT+TGG | + | chr8_2:8507796-8507815 | None:intergenic | 30.0% |
| !!! | ACACTGATGCTATTTTACTA+GGG | + | chr8_2:8507885-8507904 | None:intergenic | 30.0% |
| !!! | AACACTGATGCTATTTTACT+AGG | + | chr8_2:8507886-8507905 | None:intergenic | 30.0% |
| ! | AACCAAAAAGTATAGACTGT+TGG | + | chr8_2:8508233-8508252 | None:intergenic | 30.0% |
| !!! | TTTTTGGTTGTGCTCTATTA+TGG | - | chr8_2:8508244-8508263 | Msa1232220:intron | 30.0% |
| !! | TTTTGGTTGTGCTCTATTAT+GGG | - | chr8_2:8508245-8508264 | Msa1232220:intron | 30.0% |
| !!! | AAACTGAAGAGAGTTTTGTT+TGG | - | chr8_2:8508271-8508290 | Msa1232220:intron | 30.0% |
| !! | ACTTCTATTTCTAATGCAGT+TGG | - | chr8_2:8508360-8508379 | Msa1232220:intron | 30.0% |
| ! | TATTTCTAATGCAGTTGGAA+AGG | - | chr8_2:8508365-8508384 | Msa1232220:intron | 30.0% |
| TGATGACTTTGATTCTGATT+GGG | - | chr8_2:8508462-8508481 | Msa1232220:intron | 30.0% | |
| AAATTGTGACGTACATAAGA+AGG | + | chr8_2:8508565-8508584 | None:intergenic | 30.0% | |
| TTTATATCCTATGGAAGAAG+AGG | - | chr8_2:8508768-8508787 | Msa1232220:intron | 30.0% | |
| !! | AAAAGTGTTCAAGATATTCC+AGG | - | chr8_2:8508810-8508829 | Msa1232220:intron | 30.0% |
| CTTTCTCTGCGATAAATATT+TGG | + | chr8_2:8508852-8508871 | None:intergenic | 30.0% | |
| TGAAAAGTCACATGATAGTT+AGG | + | chr8_2:8508931-8508950 | None:intergenic | 30.0% | |
| TTGTCACATGTTTGAATTTG+TGG | - | chr8_2:8508978-8508997 | Msa1232220:intron | 30.0% | |
| TGTCACATGTTTGAATTTGT+GGG | - | chr8_2:8508979-8508998 | Msa1232220:intron | 30.0% | |
| TGTGTTGAATGTATTCATCA+AGG | - | chr8_2:8509017-8509036 | Msa1232220:intron | 30.0% | |
| GCTTAGAAACATATTGAGAA+GGG | + | chr8_2:8509059-8509078 | None:intergenic | 30.0% | |
| GCTAAGAAAGACAAAAGTAA+AGG | - | chr8_2:8509094-8509113 | Msa1232220:intron | 30.0% | |
| ! | ATAATGAAGTACTTGAAGCT+CGG | + | chr8_2:8509153-8509172 | None:intergenic | 30.0% |
| ATATTGCAATTCAAGCTTTG+CGG | - | chr8_2:8509239-8509258 | Msa1232220:intron | 30.0% | |
| GATCACACAAATTTATGGTT+TGG | + | chr8_2:8509360-8509379 | None:intergenic | 30.0% | |
| ! | AGTTTGGAATTGCTCAAAAA+AGG | - | chr8_2:8509430-8509449 | Msa1232220:intron | 30.0% |
| ! | AGTTGTCCAAGTTTAAAACA+TGG | - | chr8_2:8509499-8509518 | Msa1232220:CDS | 30.0% |
| !! | TACCTTCCATGTTTTAAACT+TGG | + | chr8_2:8509508-8509527 | None:intergenic | 30.0% |
| ATATCACACCTAAAAGACAT+TGG | + | chr8_2:8509612-8509631 | None:intergenic | 30.0% | |
| TTTAGGTGTGATATCATCAA+TGG | - | chr8_2:8509618-8509637 | Msa1232220:intron | 30.0% | |
| !! | TTCTAGTTAGGTTGATTAAG+AGG | - | chr8_2:8509668-8509687 | Msa1232220:intron | 30.0% |
| !! | TTAGGTTGATTAAGAGGTAT+TGG | - | chr8_2:8509674-8509693 | Msa1232220:CDS | 30.0% |
| TTTGTGTTAATTCCTGATGT+TGG | - | chr8_2:8509772-8509791 | Msa1232220:intron | 30.0% | |
| ! | GTGATTTCAGATTTTGGATA+TGG | - | chr8_2:8509864-8509883 | Msa1232220:intron | 30.0% |
| !!! | TGAGAGTGCTTAGTTTTTTT+TGG | - | chr8_2:8510041-8510060 | Msa1232220:CDS | 30.0% |
| !!! | AGTGCTTAGTTTTTTTTGGT+GGG | - | chr8_2:8510045-8510064 | Msa1232220:CDS | 30.0% |
| !! | GCTTTGGTGATTTTCTTTTT+AGG | - | chr8_2:8510150-8510169 | Msa1232220:CDS | 30.0% |
| TAACAAAGGTAAAACAAAGG+TGG | + | chr8_2:8510693-8510712 | None:intergenic | 30.0% | |
| TGAAAGGGATTCTAAATAGT+TGG | - | chr8_2:8511044-8511063 | Msa1232220:intron | 30.0% | |
| CGGAAGGAAAAAAAACAAAA+AGG | + | chr8_2:8511417-8511436 | None:intergenic | 30.0% | |
| GAACACATGTACTTTATTGT+CGG | + | chr8_2:8511506-8511525 | None:intergenic | 30.0% | |
| CAATAACTCTCTCATACTTA+TGG | + | chr8_2:8512035-8512054 | None:intergenic | 30.0% | |
| CATAAGTATGAGAGAGTTAT+TGG | - | chr8_2:8512033-8512052 | Msa1232220:intron | 30.0% | |
| ACATGCTAGCATATACTATA+TGG | - | chr8_2:8512132-8512151 | Msa1232220:intron | 30.0% | |
| GGGAATCAAACTCATAAATA+TGG | - | chr8_2:8512182-8512201 | Msa1232220:intron | 30.0% | |
| TGACAAGAAAAATGAATGGA+CGG | - | chr8_2:8512228-8512247 | Msa1232220:intron | 30.0% | |
| ATGAAATATGAAGGTCATCA+TGG | + | chr8_2:8512277-8512296 | None:intergenic | 30.0% | |
| CAACTCTGAATGAAATATGA+AGG | + | chr8_2:8512286-8512305 | None:intergenic | 30.0% | |
| ! | TTTTCTGCTTTATGCTCTTT+AGG | - | chr8_2:8512325-8512344 | Msa1232220:five_prime_UTR | 30.0% |
| TCCATAATCTTCTTCGAAGA+CGG | + | chr8_2:8507052-8507071 | None:intergenic | 35.0% | |
| ! | TGGTCTGAGACATTATAAAC+AGG | - | chr8_2:8507077-8507096 | Msa1232220:intron | 35.0% |
| CATGAACATACCAACATGAT+TGG | - | chr8_2:8507385-8507404 | Msa1232220:intron | 35.0% | |
| AATGGTAGTCTATCATTGAG+AGG | + | chr8_2:8507442-8507461 | None:intergenic | 35.0% | |
| TCTCAATGATAGACTACCAT+TGG | - | chr8_2:8507441-8507460 | Msa1232220:intron | 35.0% | |
| GTTACTAAATCAAGAACGGA+TGG | - | chr8_2:8507574-8507593 | Msa1232220:intron | 35.0% | |
| TAAATCAAGAACGGATGGTA+GGG | - | chr8_2:8507579-8507598 | Msa1232220:intron | 35.0% | |
| AGAGATTCTTTGTTCAAAGG+AGG | - | chr8_2:8507612-8507631 | Msa1232220:intron | 35.0% | |
| GAGATTCTTTGTTCAAAGGA+GGG | - | chr8_2:8507613-8507632 | Msa1232220:intron | 35.0% | |
| AGATTCTTTGTTCAAAGGAG+GGG | - | chr8_2:8507614-8507633 | Msa1232220:intron | 35.0% | |
| TCAAGAAAAGTGAAGATAGG+TGG | - | chr8_2:8507725-8507744 | Msa1232220:intron | 35.0% | |
| ! | ATTGATGTGCTTGATGATTC+TGG | - | chr8_2:8507853-8507872 | Msa1232220:intron | 35.0% |
| AATTGTCAGTTGAAGAATCC+TGG | - | chr8_2:8508033-8508052 | Msa1232220:intron | 35.0% | |
| ATTGTCAGTTGAAGAATCCT+GGG | - | chr8_2:8508034-8508053 | Msa1232220:intron | 35.0% | |
| TGAAATGCATAGAAAAACCC+AGG | + | chr8_2:8508054-8508073 | None:intergenic | 35.0% | |
| !!! | ATTGCTTTTGGGTTGATTCA+AGG | - | chr8_2:8508100-8508119 | Msa1232220:intron | 35.0% |
| TGATGATTAACTCCAGTGAA+TGG | + | chr8_2:8508210-8508229 | None:intergenic | 35.0% | |
| ! | CACCAACAGTCTATACTTTT+TGG | - | chr8_2:8508228-8508247 | Msa1232220:intron | 35.0% |
| TTGTTTGGTTGCTACATACT+TGG | - | chr8_2:8508286-8508305 | Msa1232220:intron | 35.0% | |
| ACATACTTGGTTAGAAGCAA+TGG | - | chr8_2:8508299-8508318 | Msa1232220:intron | 35.0% | |
| AGTCATCAGTAGTGATAGTT+TGG | + | chr8_2:8508450-8508469 | None:intergenic | 35.0% | |
| CTGATGACTTTGATTCTGAT+TGG | - | chr8_2:8508461-8508480 | Msa1232220:intron | 35.0% | |
| GATGACTTTGATTCTGATTG+GGG | - | chr8_2:8508463-8508482 | Msa1232220:intron | 35.0% | |
| ACGAGTTGCAAGATAACAAA+TGG | - | chr8_2:8508503-8508522 | Msa1232220:intron | 35.0% | |
| GTTTGTGACACAATATGAGA+AGG | - | chr8_2:8508672-8508691 | Msa1232220:intron | 35.0% | |
| TCTTGATGCACGTTATAACA+AGG | - | chr8_2:8508696-8508715 | Msa1232220:intron | 35.0% | |
| GAGAGAAGAATGTTAAGACA+AGG | - | chr8_2:8508722-8508741 | Msa1232220:intron | 35.0% | |
| TTTGCGCACTTTATATCCTA+TGG | - | chr8_2:8508759-8508778 | Msa1232220:intron | 35.0% | |
| GGCTTAGAAACATATTGAGA+AGG | + | chr8_2:8509060-8509079 | None:intergenic | 35.0% | |
| ! | TCAATATGTTTCTAAGCCGA+TGG | - | chr8_2:8509062-8509081 | Msa1232220:intron | 35.0% |
| TCTTAGCATTTATGGTCCAT+CGG | + | chr8_2:8509081-8509100 | None:intergenic | 35.0% | |
| !! | CAAATTTATGGTTTGGTCGT+CGG | + | chr8_2:8509353-8509372 | None:intergenic | 35.0% |
| TGCTGGATCACACAAATTTA+TGG | + | chr8_2:8509365-8509384 | None:intergenic | 35.0% | |
| TTTACGAATGAAAGGCAGTT+TGG | - | chr8_2:8509414-8509433 | Msa1232220:intron | 35.0% | |
| AATGAAGTGTAGTTATTGCC+AGG | - | chr8_2:8509456-8509475 | Msa1232220:intron | 35.0% | |
| ATGAAGTGTAGTTATTGCCA+GGG | - | chr8_2:8509457-8509476 | Msa1232220:intron | 35.0% | |
| ! | TTGGACAACTACGTTTGTTA+TGG | + | chr8_2:8509489-8509508 | None:intergenic | 35.0% |
| ! | GTCCAAGTTTAAAACATGGA+AGG | - | chr8_2:8509503-8509522 | Msa1232220:CDS | 35.0% |
| GTCACTGAATCAACTTAACA+TGG | + | chr8_2:8509586-8509605 | None:intergenic | 35.0% | |
| ! | GTGACAAACCAATGTCTTTT+AGG | - | chr8_2:8509601-8509620 | Msa1232220:intron | 35.0% |
| ! | CTAACTAGAAGCTTTAACAC+TGG | + | chr8_2:8509658-8509677 | None:intergenic | 35.0% |
| ! | CAGTGTTAAAGCTTCTAGTT+AGG | - | chr8_2:8509656-8509675 | Msa1232220:intron | 35.0% |
| TCGACAAAACTATCCTTTAG+TGG | + | chr8_2:8509818-8509837 | None:intergenic | 35.0% | |
| !!! | GATAGTTTTGTCGAACTCAA+AGG | - | chr8_2:8509824-8509843 | Msa1232220:intron | 35.0% |
| ! | TCTGGTGTGATTTCAGATTT+TGG | - | chr8_2:8509858-8509877 | Msa1232220:intron | 35.0% |
| !! | AGATTTTGGATATGGTGCTA+GGG | - | chr8_2:8509872-8509891 | Msa1232220:intron | 35.0% |
| !!! | GAGTGCTTAGTTTTTTTTGG+TGG | - | chr8_2:8510044-8510063 | Msa1232220:CDS | 35.0% |
| !!! | TTTAGTTTTAGCTGGCTTGT+AGG | - | chr8_2:8510126-8510145 | Msa1232220:CDS | 35.0% |
| CATGAAACCAAATCCATTGA+TGG | + | chr8_2:8510240-8510259 | None:intergenic | 35.0% | |
| ! | GATTTGTCTTTTCCTCATAC+TGG | - | chr8_2:8510756-8510775 | Msa1232220:CDS | 35.0% |
| ! | TTCCTCATACTGGTTGTATT+TGG | - | chr8_2:8510766-8510785 | Msa1232220:CDS | 35.0% |
| ATCCAAATACAACCAGTATG+AGG | + | chr8_2:8510771-8510790 | None:intergenic | 35.0% | |
| GGAAAAATGCATTAAATCGC+AGG | + | chr8_2:8510861-8510880 | None:intergenic | 35.0% | |
| GGTCTTAAAAAAGTCAGGAA+AGG | - | chr8_2:8510905-8510924 | Msa1232220:intron | 35.0% | |
| ! | TTACTAGTTTGTGTGGTGTT+TGG | - | chr8_2:8511368-8511387 | Msa1232220:intron | 35.0% |
| ! | TACTAGTTTGTGTGGTGTTT+GGG | - | chr8_2:8511369-8511388 | Msa1232220:intron | 35.0% |
| AAAGGTTGAGTGAATATGAG+AGG | - | chr8_2:8511582-8511601 | Msa1232220:intron | 35.0% | |
| ! | TCTTTAGGAAACTTCCATGA+AGG | - | chr8_2:8511755-8511774 | Msa1232220:CDS | 35.0% |
| AAAGATATGCAATCAGTCAG+TGG | + | chr8_2:8511787-8511806 | None:intergenic | 35.0% | |
| TCTTCTTGCACCATTATTCA+GGG | + | chr8_2:8511846-8511865 | None:intergenic | 35.0% | |
| ATCTTCTTGCACCATTATTC+AGG | + | chr8_2:8511847-8511866 | None:intergenic | 35.0% | |
| GGACTTCTCTAACTTTGATT+GGG | + | chr8_2:8511901-8511920 | None:intergenic | 35.0% | |
| TCCTCTTTCCATGTTTCAAA+GGG | + | chr8_2:8511922-8511941 | None:intergenic | 35.0% | |
| TTCCTCTTTCCATGTTTCAA+AGG | + | chr8_2:8511923-8511942 | None:intergenic | 35.0% | |
| TATTCAACTAGGACAAGAAG+TGG | - | chr8_2:8511965-8511984 | Msa1232220:CDS | 35.0% | |
| GACAAGAAAAATGAATGGAC+GGG | - | chr8_2:8512229-8512248 | Msa1232220:intron | 35.0% | |
| ACAAGAAAAATGAATGGACG+GGG | - | chr8_2:8512230-8512249 | Msa1232220:intron | 35.0% | |
| !! | GACAAATCAGGAGTTGATAT+TGG | + | chr8_2:8512437-8512456 | None:intergenic | 35.0% |
| TCGCACGAACAAAAGAAAGT+AGG | + | chr8_2:8506989-8507008 | None:intergenic | 40.0% | |
| ACCGTCTTCGAAGAAGATTA+TGG | - | chr8_2:8507048-8507067 | Msa1232220:intron | 40.0% | |
| ATCATCTGAGCCAATCATGT+TGG | + | chr8_2:8507398-8507417 | None:intergenic | 40.0% | |
| ! | ATTCCTTCAAAGGGCTCTAA+GGG | + | chr8_2:8507472-8507491 | None:intergenic | 40.0% |
| CTAAATCAAGAACGGATGGT+AGG | - | chr8_2:8507578-8507597 | Msa1232220:intron | 40.0% | |
| GTACATGATCAAACAAGGGT+AGG | - | chr8_2:8507682-8507701 | Msa1232220:intron | 40.0% | |
| ! | GTGCTTGATGATTCTGGTAT+AGG | - | chr8_2:8507859-8507878 | Msa1232220:intron | 40.0% |
| ! | GGTTGATTCAAGGTCTAGAA+TGG | - | chr8_2:8508110-8508129 | Msa1232220:intron | 40.0% |
| !!! | TTTTGGTGATGTGGTGACTT+TGG | - | chr8_2:8508143-8508162 | Msa1232220:CDS | 40.0% |
| !! | TGAATGGAACAAAGGGCATT+AGG | + | chr8_2:8508194-8508213 | None:intergenic | 40.0% |
| ACTCCAGTGAATGGAACAAA+GGG | + | chr8_2:8508201-8508220 | None:intergenic | 40.0% | |
| AACTCCAGTGAATGGAACAA+AGG | + | chr8_2:8508202-8508221 | None:intergenic | 40.0% | |
| ACTTGGTTAGAAGCAATGGA+TGG | - | chr8_2:8508303-8508322 | Msa1232220:intron | 40.0% | |
| ! | AGTTGGAAAGGTTTTTCCAG+AGG | - | chr8_2:8508377-8508396 | Msa1232220:intron | 40.0% |
| CAATAATGATGATTCGCCTC+TGG | + | chr8_2:8508396-8508415 | None:intergenic | 40.0% | |
| ! | GTACGTCACAATTTTTGTGC+TGG | - | chr8_2:8508571-8508590 | Msa1232220:intron | 40.0% |
| CATACTTTCACTCCTTTGAG+TGG | + | chr8_2:8508605-8508624 | None:intergenic | 40.0% | |
| ! | TGTGTCACAAACTTGCTCAA+TGG | + | chr8_2:8508664-8508683 | None:intergenic | 40.0% |
| GGATATAAAGTGCGCAAAAG+TGG | + | chr8_2:8508757-8508776 | None:intergenic | 40.0% | |
| ! | TTTGAAGCCTCTTCTTCCAT+AGG | + | chr8_2:8508778-8508797 | None:intergenic | 40.0% |
| CAAGATATTCCAGGATGAGT+TGG | - | chr8_2:8508819-8508838 | Msa1232220:intron | 40.0% | |
| !! | ATATTCCAGGATGAGTTGGT+TGG | - | chr8_2:8508823-8508842 | Msa1232220:intron | 40.0% |
| GCAATTGAAGACCTTGAAGA+AGG | - | chr8_2:8509121-8509140 | Msa1232220:intron | 40.0% | |
| TCTCTTGAACTATCTGAGAG+AGG | - | chr8_2:8509193-8509212 | Msa1232220:intron | 40.0% | |
| CCTTTCATTCGTAAAGTACG+TGG | + | chr8_2:8509409-8509428 | None:intergenic | 40.0% | |
| CCACGTACTTTACGAATGAA+AGG | - | chr8_2:8509406-8509425 | Msa1232220:intron | 40.0% | |
| TGTAGTTATTGCCAGGGAAA+AGG | - | chr8_2:8509463-8509482 | Msa1232220:intron | 40.0% | |
| !! | AGTTTTGTCGAACTCAAAGG+TGG | - | chr8_2:8509827-8509846 | Msa1232220:intron | 40.0% |
| ! | CAGATTTTGGATATGGTGCT+AGG | - | chr8_2:8509871-8509890 | Msa1232220:intron | 40.0% |
| !!! | GTTTTTTTTGGTGGGTGCTA+AGG | - | chr8_2:8510053-8510072 | Msa1232220:CDS | 40.0% |
| ! | AGTGGTTCCATCAATGGATT+TGG | - | chr8_2:8510230-8510249 | Msa1232220:CDS | 40.0% |
| !! | GAATTCTGCCTCTAAAGTTG+TGG | + | chr8_2:8510402-8510421 | None:intergenic | 40.0% |
| AAAAAGTTGCTGAGATGCGT+TGG | - | chr8_2:8510444-8510463 | Msa1232220:CDS | 40.0% | |
| TGAGATGCGTTGGAATAACA+TGG | - | chr8_2:8510454-8510473 | Msa1232220:CDS | 40.0% | |
| GATGCAAGTGCTCTCATATT+AGG | - | chr8_2:8510586-8510605 | Msa1232220:CDS | 40.0% | |
| TGTTATGGCAAGGAATGGAT+AGG | - | chr8_2:8510632-8510651 | Msa1232220:CDS | 40.0% | |
| GTTATGGCAAGGAATGGATA+GGG | - | chr8_2:8510633-8510652 | Msa1232220:CDS | 40.0% | |
| !!! | GAGCTGCCATTTTGTAACAA+AGG | + | chr8_2:8510707-8510726 | None:intergenic | 40.0% |
| ! | TGGCAGCTCTTGATTGTTTT+AGG | - | chr8_2:8510718-8510737 | Msa1232220:CDS | 40.0% |
| CTATATCTTGTACTCGGTTC+AGG | - | chr8_2:8510830-8510849 | Msa1232220:CDS | 40.0% | |
| AACAGCACCAAAACAAGTCT+CGG | + | chr8_2:8511084-8511103 | None:intergenic | 40.0% | |
| !!! | GACTTGTTTTGGTGCTGTTT+CGG | - | chr8_2:8511085-8511104 | Msa1232220:intron | 40.0% |
| !!! | ACTTGTTTTGGTGCTGTTTC+GGG | - | chr8_2:8511086-8511105 | Msa1232220:intron | 40.0% |
| ! | TGTTTAGCAGGAGAGTTTTG+AGG | - | chr8_2:8511304-8511323 | Msa1232220:intron | 40.0% |
| GGAGTTTAACACGTATAGCT+CGG | - | chr8_2:8511340-8511359 | Msa1232220:intron | 40.0% | |
| CACCACACAAACTAGTAATG+AGG | + | chr8_2:8511366-8511385 | None:intergenic | 40.0% | |
| ! | ACTAGTTTGTGTGGTGTTTG+GGG | - | chr8_2:8511370-8511389 | Msa1232220:intron | 40.0% |
| CCTAAAGAAGAGAACACATG+CGG | + | chr8_2:8511743-8511762 | None:intergenic | 40.0% | |
| GTCAGTGGAAATTACCTTCA+TGG | + | chr8_2:8511772-8511791 | None:intergenic | 40.0% | |
| GGGACTTCTCTAACTTTGAT+TGG | + | chr8_2:8511902-8511921 | None:intergenic | 40.0% | |
| !! | AGAGAAGTCCCTTTGAAACA+TGG | - | chr8_2:8511911-8511930 | Msa1232220:CDS | 40.0% |
| !! | TCCCTTTGAAACATGGAAAG+AGG | - | chr8_2:8511918-8511937 | Msa1232220:CDS | 40.0% |
| CATGGAAAGAGGAATAAGAC+AGG | - | chr8_2:8511929-8511948 | Msa1232220:CDS | 40.0% | |
| ! | TCTTTAGGAGAACTACACTG+AGG | - | chr8_2:8512340-8512359 | Msa1232220:five_prime_UTR | 40.0% |
| CATACTGATGCAGTACTTAG+AGG | + | chr8_2:8512368-8512387 | None:intergenic | 40.0% | |
| ! | GCAGTGTTCATGAAGACTTT+TGG | - | chr8_2:8512390-8512409 | Msa1232220:five_prime_UTR | 40.0% |
| ! | GTGTTCATGAAGACTTTTGG+AGG | - | chr8_2:8512393-8512412 | Msa1232220:five_prime_UTR | 40.0% |
| ! | TTCTTTTGTTCGTGCGAACG+AGG | - | chr8_2:8506992-8507011 | Msa1232220:CDS | 45.0% |
| !! | TTCCTTCAAAGGGCTCTAAG+GGG | + | chr8_2:8507471-8507490 | None:intergenic | 45.0% |
| CATTCCTTCAAAGGGCTCTA+AGG | + | chr8_2:8507473-8507492 | None:intergenic | 45.0% | |
| AATACTACACAAGGTACGCG+AGG | - | chr8_2:8507521-8507540 | Msa1232220:intron | 45.0% | |
| ACAAGGTACGCGAGGAATAA+AGG | - | chr8_2:8507529-8507548 | Msa1232220:intron | 45.0% | |
| AGAACGGATGGTAGGGTAAT+TGG | - | chr8_2:8507586-8507605 | Msa1232220:intron | 45.0% | |
| TCAAACAAGGGTAGGATGCA+AGG | - | chr8_2:8507690-8507709 | Msa1232220:intron | 45.0% | |
| TCAGTGTTATGTACCGAGAG+TGG | - | chr8_2:8507898-8507917 | Msa1232220:intron | 45.0% | |
| ATTATCAACACCGCCACTCT+CGG | + | chr8_2:8507914-8507933 | None:intergenic | 45.0% | |
| !! | AGTGGCGGTGTTGATAATGT+TGG | - | chr8_2:8507916-8507935 | Msa1232220:intron | 45.0% |
| GCATTTCAAATGGACGCAGA+AGG | - | chr8_2:8508066-8508085 | Msa1232220:intron | 45.0% | |
| ATGCCCTTTGTTCCATTCAC+TGG | - | chr8_2:8508195-8508214 | Msa1232220:CDS | 45.0% | |
| TCTACTCCATTCGAGCAAAG+TGG | - | chr8_2:8508536-8508555 | Msa1232220:intron | 45.0% | |
| AGGAATCCACTTTGCTCGAA+TGG | + | chr8_2:8508545-8508564 | None:intergenic | 45.0% | |
| ACTTTCACTCCTTTGAGTGG+TGG | + | chr8_2:8508602-8508621 | None:intergenic | 45.0% | |
| TGCAATTCAAGCTTTGCGGA+AGG | - | chr8_2:8509243-8509262 | Msa1232220:intron | 45.0% | |
| AAGTACGTGGACGACCTTTA+GGG | + | chr8_2:8509396-8509415 | None:intergenic | 45.0% | |
| AAAGTACGTGGACGACCTTT+AGG | + | chr8_2:8509397-8509416 | None:intergenic | 45.0% | |
| !!! | GTTTGTTATGGCCTTTTCCC+TGG | + | chr8_2:8509477-8509496 | None:intergenic | 45.0% |
| GTCTGCAACAAACCAACATC+AGG | + | chr8_2:8509787-8509806 | None:intergenic | 45.0% | |
| CTATCCTTTAGTGGCAAAGC+AGG | + | chr8_2:8509809-8509828 | None:intergenic | 45.0% | |
| TTTGTCGAACTCAAAGGTGG+TGG | - | chr8_2:8509830-8509849 | Msa1232220:intron | 45.0% | |
| TTGTCGAACTCAAAGGTGGT+GGG | - | chr8_2:8509831-8509850 | Msa1232220:intron | 45.0% | |
| TGATGGAACCACTTAGTCCA+AGG | + | chr8_2:8510223-8510242 | None:intergenic | 45.0% | |
| GGACTAAGTGGTTCCATCAA+TGG | - | chr8_2:8510224-8510243 | Msa1232220:CDS | 45.0% | |
| CGGATATGCCACAACTTTAG+AGG | - | chr8_2:8510391-8510410 | Msa1232220:CDS | 45.0% | |
| CAACGATTCTGCATTCTCCA+AGG | + | chr8_2:8510534-8510553 | None:intergenic | 45.0% | |
| CTTGGAGAATGCAGAATCGT+TGG | - | chr8_2:8510532-8510551 | Msa1232220:CDS | 45.0% | |
| TGCTCTCATATTAGGCGAGA+AGG | - | chr8_2:8510594-8510613 | Msa1232220:CDS | 45.0% | |
| GCTCTCATATTAGGCGAGAA+GGG | - | chr8_2:8510595-8510614 | Msa1232220:CDS | 45.0% | |
| TTGCCATAACATCAGCCACA+CGG | + | chr8_2:8510623-8510642 | None:intergenic | 45.0% | |
| GCTGATGTTATGGCAAGGAA+TGG | - | chr8_2:8510627-8510646 | Msa1232220:CDS | 45.0% | |
| CTAAATAGTTGGCCGACGAT+AGG | - | chr8_2:8511055-8511074 | Msa1232220:intron | 45.0% | |
| !! | TAGGTGTCCGAGACTTGTTT+TGG | - | chr8_2:8511074-8511093 | Msa1232220:intron | 45.0% |
| TTTGTGTTGAAGCTGCAGGA+AGG | - | chr8_2:8511157-8511176 | Msa1232220:intron | 45.0% | |
| AATGGCAGAAAATCAGCACC+AGG | + | chr8_2:8511201-8511220 | None:intergenic | 45.0% | |
| TTTCTGCCATTCGCTGCTAA+AGG | - | chr8_2:8511210-8511229 | Msa1232220:intron | 45.0% | |
| CCAAATCCTTTAGCAGCGAA+TGG | + | chr8_2:8511219-8511238 | None:intergenic | 45.0% | |
| CCATTCGCTGCTAAAGGATT+TGG | - | chr8_2:8511216-8511235 | Msa1232220:intron | 45.0% | |
| TCGCTGCTAAAGGATTTGGA+AGG | - | chr8_2:8511220-8511239 | Msa1232220:intron | 45.0% | |
| CGCTGCTAAAGGATTTGGAA+GGG | - | chr8_2:8511221-8511240 | Msa1232220:intron | 45.0% | |
| ACCTCCTAATAAAGGTCCCT+GGG | + | chr8_2:8511273-8511292 | None:intergenic | 45.0% | |
| AACCTCCTAATAAAGGTCCC+TGG | + | chr8_2:8511274-8511293 | None:intergenic | 45.0% | |
| ! | GGCCTCATTACTAGTTTGTG+TGG | - | chr8_2:8511361-8511380 | Msa1232220:intron | 45.0% |
| AAAAGGATGCCGCGTATAGA+CGG | + | chr8_2:8511400-8511419 | None:intergenic | 45.0% | |
| CCGCATGTGTTCTCTTCTTT+AGG | - | chr8_2:8511740-8511759 | Msa1232220:CDS | 45.0% | |
| GTCCACAAGTCCCTGAATAA+TGG | - | chr8_2:8511833-8511852 | Msa1232220:CDS | 45.0% | |
| CACCATTATTCAGGGACTTG+TGG | + | chr8_2:8511838-8511857 | None:intergenic | 45.0% | |
| CTTCTTCGAAGACGGTTCTC+AGG | + | chr8_2:8507044-8507063 | None:intergenic | 50.0% | |
| GTGTTATGTACCGAGAGTGG+CGG | - | chr8_2:8507901-8507920 | Msa1232220:intron | 50.0% | |
| CTGGAATGTCCACCACTCAA+AGG | - | chr8_2:8508590-8508609 | Msa1232220:intron | 50.0% | |
| CTCGGTTTCTGCCTTCTTCA+AGG | + | chr8_2:8509135-8509154 | None:intergenic | 50.0% | |
| GTTTGGTCGTCGGAGACTTT+AGG | + | chr8_2:8509343-8509362 | None:intergenic | 50.0% | |
| CAGACCTGCTTTGCCACTAA+AGG | - | chr8_2:8509802-8509821 | Msa1232220:intron | 50.0% | |
| !! | TCAAAGGTGGTGGGTTTCTC+TGG | - | chr8_2:8509840-8509859 | Msa1232220:intron | 50.0% |
| !! | TAGCTGGCTTGTAGGTGCTT+TGG | - | chr8_2:8510134-8510153 | Msa1232220:CDS | 50.0% |
| TGCTTAGCACAGCTTGTCCT+TGG | - | chr8_2:8510203-8510222 | Msa1232220:CDS | 50.0% | |
| CAGCTTGTCCTTGGACTAAG+TGG | - | chr8_2:8510212-8510231 | Msa1232220:CDS | 50.0% | |
| AGTCTGACTCACTTGTGCCT+TGG | - | chr8_2:8510514-8510533 | Msa1232220:CDS | 50.0% | |
| GAACCGTGTGGCTGATGTTA+TGG | - | chr8_2:8510617-8510636 | Msa1232220:CDS | 50.0% | |
| GTGTGGCTGATGTTATGGCA+AGG | - | chr8_2:8510622-8510641 | Msa1232220:CDS | 50.0% | |
| TGGCTATGCACTCATCTCAG+TGG | - | chr8_2:8510658-8510677 | Msa1232220:CDS | 50.0% | |
| CTATGCACTCATCTCAGTGG+TGG | - | chr8_2:8510661-8510680 | Msa1232220:CDS | 50.0% | |
| AAGTCTCGGACACCTATCGT+CGG | + | chr8_2:8511070-8511089 | None:intergenic | 50.0% | |
| CAACACAAACAGCAGAGCAG+CGG | + | chr8_2:8511146-8511165 | None:intergenic | 50.0% | |
| GCTGTTTGTGTTGAAGCTGC+AGG | - | chr8_2:8511153-8511172 | Msa1232220:intron | 50.0% | |
| !!! | TAGCAGGAGAGTTTTGAGGC+AGG | - | chr8_2:8511308-8511327 | Msa1232220:intron | 50.0% |
| !!! | AGCAGGAGAGTTTTGAGGCA+GGG | - | chr8_2:8511309-8511328 | Msa1232220:intron | 50.0% |
| GCAAGACGCACTTAATCTCG+CGG | + | chr8_2:8511437-8511456 | None:intergenic | 50.0% | |
| AGAGAACACATGCGGAGACA+GGG | + | chr8_2:8511735-8511754 | None:intergenic | 50.0% | |
| AAGAGAACACATGCGGAGAC+AGG | + | chr8_2:8511736-8511755 | None:intergenic | 50.0% | |
| CAGGGACTTGTGGACAAGTT+TGG | + | chr8_2:8511828-8511847 | None:intergenic | 50.0% | |
| CTTCGAAGACGGTTCTCAGG+CGG | + | chr8_2:8507041-8507060 | None:intergenic | 55.0% | |
| CTCCCCTTAGAGCCCTTTGA+AGG | - | chr8_2:8507466-8507485 | Msa1232220:intron | 55.0% | |
| GGGATCCAACCAACTCATCC+TGG | + | chr8_2:8508831-8508850 | None:intergenic | 55.0% | |
| GGCAAGGAATGGATAGGGTC+TGG | - | chr8_2:8510638-8510657 | Msa1232220:CDS | 55.0% | |
| !! | TGTTTGTTGTGCTGCCCTCC+TGG | - | chr8_2:8511247-8511266 | Msa1232220:intron | 55.0% |
| CTAATAAAGGTCCCTGGGCC+AGG | + | chr8_2:8511268-8511287 | None:intergenic | 55.0% | |
| CTGGCCCAGGGACCTTTATT+AGG | - | chr8_2:8511266-8511285 | Msa1232220:intron | 55.0% | |
| GCCCAGGGACCTTTATTAGG+AGG | - | chr8_2:8511269-8511288 | Msa1232220:intron | 55.0% | |
| !!! | GCAGGAGAGTTTTGAGGCAG+GGG | - | chr8_2:8511310-8511329 | Msa1232220:intron | 55.0% |
| !!! | TTTTGAGGCAGGGGTATGCG+TGG | - | chr8_2:8511319-8511338 | Msa1232220:intron | 55.0% |
| ! | TGGGGTGTTCCGTCTATACG+CGG | - | chr8_2:8511388-8511407 | Msa1232220:intron | 55.0% |
| GACGCACTTAATCTCGCGGA+AGG | + | chr8_2:8511433-8511452 | None:intergenic | 55.0% | |
| !! | GGCTCTAAGGGGAGCTCCAA+TGG | + | chr8_2:8507460-8507479 | None:intergenic | 60.0% |
| ! | CCTTTAGGGACAGCACGTGC+TGG | + | chr8_2:8509382-8509401 | None:intergenic | 60.0% |
| CCAGCACGTGCTGTCCCTAA+AGG | - | chr8_2:8509379-8509398 | Msa1232220:intron | 60.0% | |
| TAGGCGAGAAGGGAACCGTG+TGG | - | chr8_2:8510605-8510624 | Msa1232220:CDS | 60.0% | |
| ! | GCTGTTTCGGGCTTCTGCTG+TGG | - | chr8_2:8511098-8511117 | Msa1232220:intron | 60.0% |
| !! | GCCTGGTGTTGCAGGTCTTG+TGG | - | chr8_2:8511120-8511139 | Msa1232220:intron | 60.0% |
| GCCACAAGACCTGCAACACC+AGG | + | chr8_2:8511124-8511143 | None:intergenic | 60.0% | |
| TAAAGGTCCCTGGGCCAGGA+GGG | + | chr8_2:8511264-8511283 | None:intergenic | 60.0% | |
| ATAAAGGTCCCTGGGCCAGG+AGG | + | chr8_2:8511265-8511284 | None:intergenic | 60.0% | |
| TTCGGGCTTCTGCTGTGGCC+TGG | - | chr8_2:8511103-8511122 | Msa1232220:intron | 65.0% | |
| !! | CTGCTGTGGCCTGGTGTTGC+AGG | - | chr8_2:8511112-8511131 | Msa1232220:intron | 65.0% |
| TTGTGCTGCCCTCCTGGCCC+AGG | - | chr8_2:8511253-8511272 | Msa1232220:intron | 70.0% | |
| TGTGCTGCCCTCCTGGCCCA+GGG | - | chr8_2:8511254-8511273 | Msa1232220:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 8506896 | 8512466 | 8506896 | ID=Msa1232220;Name=Msa1232220 |
| chr8_2 | mRNA | 8506896 | 8512466 | 8506896 | ID=Msa1232220-mRNA-1;Parent=Msa1232220;Name=Msa1232220-mRNA-1;_AED=0.25;_eAED=0.35;_QI=227|0.28|0.25|0.75|0.57|0.5|8|0|517 |
| chr8_2 | exon | 8506896 | 8507015 | 8506896 | ID=Msa1232220-mRNA-1:exon:3366;Parent=Msa1232220-mRNA-1 |
| chr8_2 | exon | 8508120 | 8508228 | 8508120 | ID=Msa1232220-mRNA-1:exon:3365;Parent=Msa1232220-mRNA-1 |
| chr8_2 | exon | 8509477 | 8509557 | 8509477 | ID=Msa1232220-mRNA-1:exon:3364;Parent=Msa1232220-mRNA-1 |
| chr8_2 | exon | 8509673 | 8509739 | 8509673 | ID=Msa1232220-mRNA-1:exon:3363;Parent=Msa1232220-mRNA-1 |
| chr8_2 | exon | 8509911 | 8510284 | 8509911 | ID=Msa1232220-mRNA-1:exon:3362;Parent=Msa1232220-mRNA-1 |
| chr8_2 | exon | 8510376 | 8510865 | 8510376 | ID=Msa1232220-mRNA-1:exon:3361;Parent=Msa1232220-mRNA-1 |
| chr8_2 | exon | 8511692 | 8512028 | 8511692 | ID=Msa1232220-mRNA-1:exon:3360;Parent=Msa1232220-mRNA-1 |
| chr8_2 | exon | 8512264 | 8512466 | 8512264 | ID=Msa1232220-mRNA-1:exon:3359;Parent=Msa1232220-mRNA-1 |
| chr8_2 | five_prime_UTR | 8512264 | 8512466 | 8512264 | ID=Msa1232220-mRNA-1:five_prime_utr;Parent=Msa1232220-mRNA-1 |
| chr8_2 | five_prime_UTR | 8512005 | 8512028 | 8512005 | ID=Msa1232220-mRNA-1:five_prime_utr;Parent=Msa1232220-mRNA-1 |
| chr8_2 | CDS | 8511692 | 8512004 | 8511692 | ID=Msa1232220-mRNA-1:cds;Parent=Msa1232220-mRNA-1 |
| chr8_2 | CDS | 8510376 | 8510865 | 8510376 | ID=Msa1232220-mRNA-1:cds;Parent=Msa1232220-mRNA-1 |
| chr8_2 | CDS | 8509911 | 8510284 | 8509911 | ID=Msa1232220-mRNA-1:cds;Parent=Msa1232220-mRNA-1 |
| chr8_2 | CDS | 8509673 | 8509739 | 8509673 | ID=Msa1232220-mRNA-1:cds;Parent=Msa1232220-mRNA-1 |
| chr8_2 | CDS | 8509477 | 8509557 | 8509477 | ID=Msa1232220-mRNA-1:cds;Parent=Msa1232220-mRNA-1 |
| chr8_2 | CDS | 8508120 | 8508228 | 8508120 | ID=Msa1232220-mRNA-1:cds;Parent=Msa1232220-mRNA-1 |
| chr8_2 | CDS | 8506896 | 8507015 | 8506896 | ID=Msa1232220-mRNA-1:cds;Parent=Msa1232220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
