Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239850 | XP_013445017.1 | 98.611 | 216 | 3 | 0 | 1 | 216 | 1 | 216 | 3.40e-156 | 441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239850 | sp|O81322|LBD31_ARATH | 54.464 | 224 | 79 | 3 | 8 | 214 | 1 | 218 | 1.32e-74 | 227 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239850 | B7FKD7 | 98.611 | 216 | 3 | 0 | 1 | 216 | 1 | 216 | 1.63e-156 | 441 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1239850 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1239850 | Msa1281120 | 0.843669 | 1.215846e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239850 | MtrunA17_Chr8g0351721 | 98.611 | 216 | 3 | 0 | 1 | 216 | 1 | 216 | 3.13e-160 | 441 |
| Msa1239850 | MtrunA17_Chr8g0351701 | 54.455 | 202 | 68 | 5 | 17 | 204 | 22 | 213 | 2.31e-64 | 199 |
| Msa1239850 | MtrunA17_Chr7g0245871 | 78.000 | 100 | 22 | 0 | 18 | 117 | 27 | 126 | 6.88e-55 | 175 |
| Msa1239850 | MtrunA17_Chr7g0245861 | 84.694 | 98 | 13 | 2 | 10 | 105 | 4 | 101 | 3.22e-54 | 170 |
| Msa1239850 | MtrunA17_Chr7g0260971 | 53.659 | 164 | 59 | 1 | 9 | 155 | 5 | 168 | 1.09e-52 | 169 |
| Msa1239850 | MtrunA17_Chr1g0184271 | 50.955 | 157 | 67 | 2 | 18 | 164 | 12 | 168 | 2.18e-50 | 163 |
| Msa1239850 | MtrunA17_Chr7g0261031 | 55.063 | 158 | 58 | 5 | 16 | 168 | 6 | 155 | 4.07e-49 | 160 |
| Msa1239850 | MtrunA17_Chr1g0184281 | 43.750 | 208 | 100 | 3 | 9 | 213 | 6 | 199 | 1.16e-46 | 153 |
| Msa1239850 | MtrunA17_Chr6g0460951 | 51.572 | 159 | 68 | 4 | 18 | 168 | 40 | 197 | 2.84e-44 | 147 |
| Msa1239850 | MtrunA17_Chr5g0435641 | 59.434 | 106 | 43 | 0 | 16 | 121 | 5 | 110 | 1.05e-43 | 145 |
| Msa1239850 | MtrunA17_Chr2g0311601 | 54.701 | 117 | 52 | 1 | 7 | 123 | 2 | 117 | 1.69e-39 | 133 |
| Msa1239850 | MtrunA17_Chr5g0437571 | 52.846 | 123 | 54 | 2 | 15 | 137 | 3 | 121 | 7.25e-38 | 129 |
| Msa1239850 | MtrunA17_Chr4g0043421 | 55.455 | 110 | 47 | 2 | 9 | 117 | 5 | 113 | 4.63e-37 | 127 |
| Msa1239850 | MtrunA17_Chr3g0106101 | 51.639 | 122 | 56 | 2 | 15 | 134 | 4 | 124 | 5.42e-36 | 124 |
| Msa1239850 | MtrunA17_Chr7g0227511 | 59.804 | 102 | 40 | 1 | 18 | 119 | 11 | 111 | 6.16e-36 | 124 |
| Msa1239850 | MtrunA17_Chr4g0058651 | 61.856 | 97 | 36 | 1 | 16 | 112 | 9 | 104 | 7.29e-36 | 124 |
| Msa1239850 | MtrunA17_Chr3g0117121 | 59.804 | 102 | 40 | 1 | 18 | 119 | 10 | 110 | 1.42e-35 | 124 |
| Msa1239850 | MtrunA17_Chr5g0437401 | 43.243 | 148 | 76 | 2 | 8 | 148 | 1 | 147 | 3.28e-35 | 122 |
| Msa1239850 | MtrunA17_Chr3g0114061 | 56.075 | 107 | 46 | 1 | 17 | 123 | 7 | 112 | 5.67e-35 | 121 |
| Msa1239850 | MtrunA17_Chr6g0449641 | 54.717 | 106 | 47 | 1 | 18 | 123 | 9 | 113 | 2.51e-34 | 119 |
| Msa1239850 | MtrunA17_Chr5g0438091 | 50.435 | 115 | 56 | 1 | 18 | 132 | 39 | 152 | 2.93e-34 | 120 |
| Msa1239850 | MtrunA17_Chr3g0113891 | 50.459 | 109 | 53 | 1 | 8 | 116 | 4 | 111 | 2.64e-33 | 118 |
| Msa1239850 | MtrunA17_Chr5g0402611 | 52.542 | 118 | 49 | 2 | 18 | 129 | 8 | 124 | 3.39e-33 | 121 |
| Msa1239850 | MtrunA17_Chr3g0129071 | 56.863 | 102 | 43 | 1 | 18 | 119 | 47 | 147 | 1.27e-32 | 117 |
| Msa1239850 | MtrunA17_Chr3g0115431 | 55.140 | 107 | 47 | 1 | 15 | 121 | 6 | 111 | 2.63e-32 | 116 |
| Msa1239850 | MtrunA17_Chr6g0449651 | 53.846 | 104 | 47 | 1 | 16 | 119 | 65 | 167 | 1.43e-31 | 114 |
| Msa1239850 | MtrunA17_Chr3g0097221 | 50.893 | 112 | 54 | 1 | 18 | 129 | 7 | 117 | 3.21e-30 | 113 |
| Msa1239850 | MtrunA17_Chr4g0030001 | 42.763 | 152 | 71 | 4 | 17 | 153 | 23 | 173 | 5.06e-30 | 110 |
| Msa1239850 | MtrunA17_Chr6g0460941 | 57.955 | 88 | 37 | 0 | 18 | 105 | 7 | 94 | 1.26e-29 | 105 |
| Msa1239850 | MtrunA17_Chr1g0200201 | 50.962 | 104 | 50 | 1 | 19 | 122 | 73 | 175 | 2.76e-29 | 108 |
| Msa1239850 | MtrunA17_Chr8g0353981 | 53.043 | 115 | 53 | 1 | 18 | 132 | 7 | 120 | 1.54e-28 | 107 |
| Msa1239850 | MtrunA17_Chr5g0432451 | 54.386 | 114 | 51 | 1 | 6 | 119 | 31 | 143 | 4.48e-28 | 105 |
| Msa1239850 | MtrunA17_Chr5g0444351 | 44.231 | 104 | 57 | 1 | 17 | 120 | 4 | 106 | 8.95e-25 | 95.1 |
| Msa1239850 | MtrunA17_Chr7g0225111 | 40.196 | 102 | 60 | 1 | 19 | 120 | 6 | 106 | 2.82e-22 | 87.8 |
| Msa1239850 | MtrunA17_Chr8g0374601 | 43.689 | 103 | 57 | 1 | 18 | 120 | 26 | 127 | 2.60e-21 | 89.4 |
| Msa1239850 | MtrunA17_Chr4g0059901 | 40.385 | 104 | 57 | 2 | 9 | 112 | 5 | 103 | 1.18e-19 | 84.3 |
| Msa1239850 | MtrunA17_Chr8g0374591 | 41.284 | 109 | 63 | 1 | 12 | 120 | 2 | 109 | 1.24e-19 | 81.3 |
| Msa1239850 | MtrunA17_Chr6g0452671 | 34.722 | 144 | 82 | 3 | 19 | 154 | 12 | 151 | 1.99e-19 | 82.4 |
| Msa1239850 | MtrunA17_Chr8g0342351 | 39.048 | 105 | 63 | 1 | 19 | 123 | 13 | 116 | 5.15e-18 | 80.1 |
| Msa1239850 | MtrunA17_Chr6g0452691 | 36.691 | 139 | 77 | 4 | 14 | 143 | 5 | 141 | 5.65e-18 | 78.2 |
| Msa1239850 | MtrunA17_Chr4g0055441 | 33.793 | 145 | 87 | 3 | 19 | 155 | 3 | 146 | 2.24e-17 | 75.9 |
| Msa1239850 | MtrunA17_Chr4g0040831 | 40.426 | 94 | 55 | 1 | 19 | 112 | 16 | 108 | 5.40e-17 | 76.3 |
| Msa1239850 | MtrunA17_Chr2g0330201 | 40.426 | 94 | 55 | 1 | 19 | 112 | 20 | 112 | 6.77e-17 | 77.4 |
| Msa1239850 | MtrunA17_Chr6g0452661 | 34.951 | 103 | 65 | 2 | 19 | 120 | 10 | 111 | 5.84e-16 | 74.3 |
| Msa1239850 | MtrunA17_Chr8g0374581 | 39.806 | 103 | 60 | 2 | 18 | 119 | 8 | 109 | 1.06e-14 | 70.5 |
| Msa1239850 | MtrunA17_Chr2g0326051 | 51.667 | 60 | 29 | 0 | 64 | 123 | 5 | 64 | 1.16e-12 | 62.8 |
| Msa1239850 | MtrunA17_Chr5g0439111 | 35.922 | 103 | 64 | 2 | 19 | 120 | 10 | 111 | 1.61e-12 | 64.3 |
| Msa1239850 | MtrunA17_Chr2g0326041 | 50.000 | 48 | 23 | 1 | 17 | 64 | 32 | 78 | 1.65e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239850 | AT4G00210.1 | 54.464 | 224 | 79 | 3 | 8 | 214 | 1 | 218 | 1.35e-75 | 227 |
| Msa1239850 | AT2G45410.1 | 55.440 | 193 | 59 | 4 | 21 | 210 | 19 | 187 | 1.33e-63 | 196 |
| Msa1239850 | AT2G45420.1 | 76.699 | 103 | 24 | 0 | 21 | 123 | 40 | 142 | 6.95e-55 | 176 |
| Msa1239850 | AT4G00220.1 | 51.256 | 199 | 65 | 4 | 21 | 201 | 20 | 204 | 1.66e-54 | 174 |
| Msa1239850 | AT3G03760.1 | 74.510 | 102 | 26 | 0 | 18 | 119 | 51 | 152 | 5.83e-49 | 161 |
| Msa1239850 | AT3G58190.1 | 61.157 | 121 | 45 | 1 | 18 | 138 | 11 | 129 | 7.05e-49 | 159 |
| Msa1239850 | AT2G42430.1 | 63.158 | 114 | 42 | 0 | 10 | 123 | 7 | 120 | 6.38e-48 | 157 |
| Msa1239850 | AT2G42440.1 | 56.489 | 131 | 52 | 3 | 16 | 143 | 5 | 133 | 1.34e-47 | 157 |
| Msa1239850 | AT5G06080.1 | 64.000 | 100 | 36 | 0 | 16 | 115 | 5 | 104 | 2.13e-45 | 149 |
| Msa1239850 | AT2G31310.1 | 58.559 | 111 | 44 | 1 | 16 | 126 | 5 | 113 | 2.46e-43 | 144 |
| Msa1239850 | AT2G30130.1 | 56.881 | 109 | 46 | 1 | 15 | 123 | 5 | 112 | 1.73e-36 | 127 |
| Msa1239850 | AT5G63090.4 | 61.165 | 103 | 39 | 1 | 18 | 120 | 11 | 112 | 2.76e-36 | 126 |
| Msa1239850 | AT5G63090.3 | 61.165 | 103 | 39 | 1 | 18 | 120 | 11 | 112 | 2.76e-36 | 126 |
| Msa1239850 | AT5G63090.2 | 61.165 | 103 | 39 | 1 | 18 | 120 | 11 | 112 | 2.76e-36 | 126 |
| Msa1239850 | AT5G63090.1 | 61.165 | 103 | 39 | 1 | 18 | 120 | 11 | 112 | 2.76e-36 | 126 |
| Msa1239850 | AT3G27650.1 | 57.843 | 102 | 42 | 1 | 18 | 119 | 39 | 139 | 3.30e-35 | 122 |
| Msa1239850 | AT5G66870.1 | 50.000 | 142 | 60 | 3 | 18 | 149 | 7 | 147 | 4.97e-33 | 121 |
| Msa1239850 | AT1G07900.1 | 39.744 | 156 | 89 | 2 | 17 | 168 | 32 | 186 | 1.67e-32 | 116 |
| Msa1239850 | AT1G31320.1 | 53.535 | 99 | 45 | 1 | 7 | 105 | 2 | 99 | 3.16e-32 | 115 |
| Msa1239850 | AT1G16530.1 | 39.623 | 159 | 86 | 3 | 9 | 166 | 5 | 154 | 3.30e-32 | 115 |
| Msa1239850 | AT3G11090.1 | 48.182 | 110 | 56 | 1 | 10 | 119 | 3 | 111 | 2.61e-31 | 112 |
| Msa1239850 | AT2G28500.1 | 50.943 | 106 | 51 | 1 | 18 | 123 | 55 | 159 | 5.67e-31 | 114 |
| Msa1239850 | AT2G30340.1 | 49.153 | 118 | 59 | 1 | 18 | 135 | 52 | 168 | 1.34e-30 | 114 |
| Msa1239850 | AT2G30340.2 | 49.153 | 118 | 59 | 1 | 18 | 135 | 53 | 169 | 1.64e-30 | 113 |
| Msa1239850 | AT3G26660.1 | 47.619 | 105 | 54 | 1 | 19 | 123 | 6 | 109 | 4.13e-30 | 108 |
| Msa1239850 | AT3G26620.1 | 47.619 | 105 | 54 | 1 | 19 | 123 | 6 | 109 | 6.71e-30 | 107 |
| Msa1239850 | AT1G65620.1 | 55.455 | 110 | 48 | 1 | 18 | 127 | 9 | 117 | 9.24e-28 | 104 |
| Msa1239850 | AT1G65620.4 | 55.455 | 110 | 48 | 1 | 18 | 127 | 9 | 117 | 9.24e-28 | 104 |
| Msa1239850 | AT1G65620.3 | 55.455 | 110 | 48 | 1 | 18 | 127 | 9 | 117 | 9.24e-28 | 104 |
| Msa1239850 | AT1G65620.5 | 55.455 | 110 | 48 | 1 | 18 | 127 | 9 | 117 | 9.24e-28 | 104 |
| Msa1239850 | AT1G65620.2 | 55.455 | 110 | 48 | 1 | 18 | 127 | 9 | 117 | 9.24e-28 | 104 |
| Msa1239850 | AT2G23660.2 | 49.515 | 103 | 51 | 1 | 18 | 120 | 5 | 106 | 1.06e-27 | 107 |
| Msa1239850 | AT2G23660.3 | 49.515 | 103 | 51 | 1 | 18 | 120 | 5 | 106 | 1.06e-27 | 107 |
| Msa1239850 | AT2G23660.1 | 49.515 | 103 | 51 | 1 | 18 | 120 | 5 | 106 | 1.06e-27 | 107 |
| Msa1239850 | AT2G40470.2 | 58.824 | 102 | 41 | 1 | 18 | 119 | 20 | 120 | 1.40e-27 | 104 |
| Msa1239850 | AT2G40470.1 | 58.824 | 102 | 41 | 1 | 18 | 119 | 45 | 145 | 1.62e-27 | 104 |
| Msa1239850 | AT3G50510.1 | 42.982 | 114 | 64 | 1 | 18 | 131 | 12 | 124 | 2.07e-24 | 95.9 |
| Msa1239850 | AT3G50510.2 | 42.982 | 114 | 64 | 1 | 18 | 131 | 12 | 124 | 2.07e-24 | 95.9 |
| Msa1239850 | AT1G72980.1 | 41.176 | 119 | 61 | 2 | 19 | 137 | 14 | 123 | 1.21e-18 | 81.3 |
| Msa1239850 | AT3G13850.1 | 40.196 | 102 | 60 | 1 | 19 | 120 | 37 | 137 | 5.70e-18 | 80.5 |
| Msa1239850 | AT5G35900.1 | 36.538 | 104 | 65 | 1 | 19 | 122 | 6 | 108 | 2.53e-17 | 77.4 |
| Msa1239850 | AT3G47870.1 | 33.333 | 108 | 69 | 2 | 14 | 119 | 30 | 136 | 2.98e-16 | 76.3 |
| Msa1239850 | AT1G06280.1 | 44.000 | 75 | 41 | 1 | 19 | 93 | 25 | 98 | 8.79e-15 | 70.5 |
Find 46 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGATGGAGCTAGCGATAT+TGG | 0.266369 | 8_2:-21907414 | None:intergenic |
| TTGAGAAGAAAGTGTGTAAA+AGG | 0.270115 | 8_2:+21901135 | Msa1239850:CDS |
| AGGGCTAGAGACCCTGTTTA+TGG | 0.285999 | 8_2:+21901318 | Msa1239850:CDS |
| CCTTGGTCTGAATCAAAATA+TGG | 0.327800 | 8_2:-21901171 | None:intergenic |
| GGTGAAGAGCTTTGAGGGTT+TGG | 0.329428 | 8_2:-21907438 | None:intergenic |
| CTTTGAGGGTTTGGAAGAGA+TGG | 0.383095 | 8_2:-21907429 | None:intergenic |
| TGAGCAACACAACCATAAAC+AGG | 0.389890 | 8_2:-21901330 | None:intergenic |
| GAGATGGAGCTAGCGATATT+GGG | 0.399594 | 8_2:-21907413 | None:intergenic |
| GCAGCAGTTCATAAAGTGTT+TGG | 0.414624 | 8_2:+21901207 | Msa1239850:CDS |
| GGCGCAGGTTATGAGCTTGC+AGG | 0.416172 | 8_2:+21907344 | Msa1239850:intron |
| TATCTTTGCACTTCAACAAC+AGG | 0.440225 | 8_2:+21901353 | Msa1239850:CDS |
| TGATGATGAACTCCAAGCTT+TGG | 0.447081 | 8_2:+21907605 | Msa1239850:CDS |
| CGCAAGAGTGGCTTGAACAT+AGG | 0.447193 | 8_2:-21907376 | None:intergenic |
| AAAATGCATGGACATGTTAG+AGG | 0.451013 | 8_2:-21907514 | None:intergenic |
| AATACGCATGAGTAACTTAG+AGG | 0.455089 | 8_2:-21901241 | None:intergenic |
| CTGCAAAATGAACCGTTCCT+TGG | 0.456736 | 8_2:-21901188 | None:intergenic |
| AACTTGGTGAAGAGCTTTGA+GGG | 0.457519 | 8_2:-21907443 | None:intergenic |
| AGTAACTAGTGAGAATTAGA+TGG | 0.459047 | 8_2:-21907672 | None:intergenic |
| TTTGCTATGAAGCTCTTGCT+AGG | 0.463484 | 8_2:+21901298 | Msa1239850:CDS |
| TCATTCCTCCTCAGATCACT+TGG | 0.466936 | 8_2:+21907467 | Msa1239850:CDS |
| CAAATTCTCGAGCCAAAGCT+TGG | 0.467986 | 8_2:-21907617 | None:intergenic |
| AAACTTGGTGAAGAGCTTTG+AGG | 0.503962 | 8_2:-21907444 | None:intergenic |
| TCATCAACCACTTTCATCAC+TGG | 0.504907 | 8_2:+21907542 | Msa1239850:CDS |
| TTGCTATGAAGCTCTTGCTA+GGG | 0.514592 | 8_2:+21901299 | Msa1239850:CDS |
| TTTGTCTCTAGGTACTTGCC+TGG | 0.516400 | 8_2:+21907636 | Msa1239850:CDS |
| TACTGTGGAGGAAAGATTGG+TGG | 0.519503 | 8_2:+21901069 | Msa1239850:CDS |
| GGAAGTGATCAAAGAGGTGG+TGG | 0.521500 | 8_2:+21901090 | Msa1239850:CDS |
| GATTACTGTGGAGGAAAGAT+TGG | 0.525418 | 8_2:+21901066 | Msa1239850:CDS |
| CATTCCTCCTCAGATCACTT+GGG | 0.532364 | 8_2:+21907468 | Msa1239850:CDS |
| GCATCAAGACGTTTATGAGC+TGG | 0.532888 | 8_2:-21901264 | None:intergenic |
| TGGCTCGAGAATTTGTCTCT+AGG | 0.535132 | 8_2:+21907625 | Msa1239850:CDS |
| ACTAGTGAGAATTAGATGGC+TGG | 0.550122 | 8_2:-21907668 | None:intergenic |
| GCGCTGCATTGTCGCAAGAG+TGG | 0.559032 | 8_2:-21907388 | None:intergenic |
| CAAAGAGGTGGTGGGCCTTG+TGG | 0.560863 | 8_2:+21901099 | Msa1239850:CDS |
| GATGGCTGGAATCTTACTCC+AGG | 0.577857 | 8_2:-21907654 | None:intergenic |
| TCTGAGGAGGAATGAAAACT+TGG | 0.592858 | 8_2:-21907459 | None:intergenic |
| ATTTGTTCCCAAGTGATCTG+AGG | 0.614152 | 8_2:-21907475 | None:intergenic |
| TGTTCCCAAGTGATCTGAGG+AGG | 0.621503 | 8_2:-21907472 | None:intergenic |
| CTCAAGTCCAGTGATGAAAG+TGG | 0.626559 | 8_2:-21907549 | None:intergenic |
| TTGATGAGGATCAAAATGCA+TGG | 0.659360 | 8_2:-21907526 | None:intergenic |
| AGTGATGAAAGTGGTTGATG+AGG | 0.671964 | 8_2:-21907540 | None:intergenic |
| GGTGGAAGTGATCAAAGAGG+TGG | 0.685701 | 8_2:+21901087 | Msa1239850:CDS |
| ATGGAGCTAGCGATATTGGG+AGG | 0.696834 | 8_2:-21907410 | None:intergenic |
| GAAGTGATCAAAGAGGTGGT+GGG | 0.697323 | 8_2:+21901091 | Msa1239850:CDS |
| GAGCAACACAACCATAAACA+GGG | 0.702970 | 8_2:-21901329 | None:intergenic |
| ATTGGTGGAAGTGATCAAAG+AGG | 0.716315 | 8_2:+21901084 | Msa1239850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAAAATCATACAAA+TGG | - | chr8_2:21901940-21901959 | None:intergenic | 10.0% |
| !! | GTTAAAATTGATTATTATTA+AGG | + | chr8_2:21902288-21902307 | Msa1239850:intron | 10.0% |
| !! | TATATATATATATATATGCT+TGG | - | chr8_2:21903086-21903105 | None:intergenic | 10.0% |
| !!! | TCATAAATATAGTTTTATTT+TGG | + | chr8_2:21903251-21903270 | Msa1239850:intron | 10.0% |
| !!! | TTTTATTTTTATTTTTGCTT+TGG | + | chr8_2:21903450-21903469 | Msa1239850:intron | 10.0% |
| !!! | TTTATTTTTATTTTTGCTTT+GGG | + | chr8_2:21903451-21903470 | Msa1239850:intron | 10.0% |
| !! | ATATTATTATAAAATGAACA+CGG | + | chr8_2:21904099-21904118 | Msa1239850:intron | 10.0% |
| !! | AAAAAAAATTAGATTAACAA+AGG | + | chr8_2:21904144-21904163 | Msa1239850:intron | 10.0% |
| !!! | AACAATATTGATATTTTTAT+CGG | + | chr8_2:21905913-21905932 | Msa1239850:intron | 10.0% |
| !! | AAATAAAATAGAAAATTATG+AGG | - | chr8_2:21906033-21906052 | None:intergenic | 10.0% |
| !! | TTTAATAATATATTATGAGT+AGG | - | chr8_2:21906382-21906401 | None:intergenic | 10.0% |
| !!! | TATTATTATTGAATTTTGTA+TGG | + | chr8_2:21907323-21907342 | Msa1239850:intron | 10.0% |
| !!! | ATCACATATTTTTAAATCAT+TGG | + | chr8_2:21901575-21901594 | Msa1239850:intron | 15.0% |
| !!! | AAGGCTTTAAAATAAAAAAA+TGG | - | chr8_2:21901786-21901805 | None:intergenic | 15.0% |
| !!! | AATTTTTTAAGAACTAAAAG+TGG | - | chr8_2:21902381-21902400 | None:intergenic | 15.0% |
| !!! | AAACTCAAAGAAAAATTTTA+AGG | + | chr8_2:21902717-21902736 | Msa1239850:intron | 15.0% |
| !! | ACGCTATTATTAATTATTAA+TGG | + | chr8_2:21902787-21902806 | Msa1239850:intron | 15.0% |
| !! | ATTCTATGAAATATTCTAAA+GGG | - | chr8_2:21902936-21902955 | None:intergenic | 15.0% |
| !! | TATTCTATGAAATATTCTAA+AGG | - | chr8_2:21902937-21902956 | None:intergenic | 15.0% |
| !!! | TAAAGGTAGTATTTATTTTT+TGG | - | chr8_2:21903145-21903164 | None:intergenic | 15.0% |
| !! | AAAAATAAAAAAATAACACG+TGG | - | chr8_2:21903440-21903459 | None:intergenic | 15.0% |
| !!! | TTATTTTTATTTTTGCTTTG+GGG | + | chr8_2:21903452-21903471 | Msa1239850:intron | 15.0% |
| !!! | TTTTGTAGTTTTTTCTTAAA+GGG | + | chr8_2:21903511-21903530 | Msa1239850:intron | 15.0% |
| !! | TGTAATTGTTAATTAAAGTT+TGG | + | chr8_2:21903668-21903687 | Msa1239850:intron | 15.0% |
| !!! | ACAAATTTTATTAGTAACTT+AGG | + | chr8_2:21904811-21904830 | Msa1239850:intron | 15.0% |
| !! | AAAGTAATAATTTCATAGTA+TGG | - | chr8_2:21904840-21904859 | None:intergenic | 15.0% |
| !!! | AGATAAAGATTTATACATTT+TGG | - | chr8_2:21905714-21905733 | None:intergenic | 15.0% |
| !!! | AGAATAATAATAGTATCTTT+TGG | + | chr8_2:21905978-21905997 | Msa1239850:intron | 15.0% |
| !! | AGGAAAATATATATACAATA+GGG | + | chr8_2:21906603-21906622 | Msa1239850:intron | 15.0% |
| !! | TGAATGAATAATTTACTTAA+TGG | + | chr8_2:21906943-21906962 | Msa1239850:intron | 15.0% |
| !! | GAATGAATAATTTACTTAAT+GGG | + | chr8_2:21906944-21906963 | Msa1239850:intron | 15.0% |
| !! | AATTATACTAGTATATGAAA+GGG | - | chr8_2:21906984-21907003 | None:intergenic | 15.0% |
| !! | CTAAAAATATATACAAGTAT+AGG | - | chr8_2:21907007-21907026 | None:intergenic | 15.0% |
| !! | TTTCAAAATTATAACCACAA+AGG | - | chr8_2:21901516-21901535 | None:intergenic | 20.0% |
| !! | CAAGTGTTAACATAAAAATA+AGG | - | chr8_2:21902423-21902442 | None:intergenic | 20.0% |
| !!! | TTATTTTTTGGACTCAAATA+TGG | - | chr8_2:21903133-21903152 | None:intergenic | 20.0% |
| !!! | TTTTTGTAAACATAAGGTAA+AGG | - | chr8_2:21903162-21903181 | None:intergenic | 20.0% |
| !!! | GTAATGTTTTTGTAAACATA+AGG | - | chr8_2:21903168-21903187 | None:intergenic | 20.0% |
| !!! | TATTTTTATTTTTGCTTTGG+GGG | + | chr8_2:21903453-21903472 | Msa1239850:intron | 20.0% |
| !!! | GTTTTGTAGTTTTTTCTTAA+AGG | + | chr8_2:21903510-21903529 | Msa1239850:intron | 20.0% |
| !! | GCAATTTCTTAAAAATTAGA+GGG | + | chr8_2:21903542-21903561 | Msa1239850:intron | 20.0% |
| !! | GTATGTCAATGAAAAATAAA+AGG | - | chr8_2:21903585-21903604 | None:intergenic | 20.0% |
| !! | TTGATGCTAGTTATATAAAT+GGG | - | chr8_2:21903636-21903655 | None:intergenic | 20.0% |
| !! | TTTGATGCTAGTTATATAAA+TGG | - | chr8_2:21903637-21903656 | None:intergenic | 20.0% |
| !! | TTGTTAATTAAAGTTTGGTT+AGG | + | chr8_2:21903673-21903692 | Msa1239850:intron | 20.0% |
| !!! | AGATAGTGAATTTTAATACT+TGG | - | chr8_2:21903966-21903985 | None:intergenic | 20.0% |
| !!! | AATGTTTATCTTGTTTTATC+TGG | + | chr8_2:21904000-21904019 | Msa1239850:intron | 20.0% |
| !! | CTAATTTGACTAATGAATAT+TGG | - | chr8_2:21904664-21904683 | None:intergenic | 20.0% |
| !! | CTAATTTGACTAATGAATAT+TGG | - | chr8_2:21904664-21904683 | None:intergenic | 20.0% |
| !! | TATCACATTTCAATTAATGA+AGG | + | chr8_2:21904878-21904897 | Msa1239850:intron | 20.0% |
| !! | ATCACATTTCAATTAATGAA+GGG | + | chr8_2:21904879-21904898 | Msa1239850:intron | 20.0% |
| !! | TATATGAGGTGATATAAAAT+TGG | + | chr8_2:21904971-21904990 | Msa1239850:intron | 20.0% |
| !! | CTTACTCAATTATTATATCT+TGG | - | chr8_2:21905358-21905377 | None:intergenic | 20.0% |
| !! | TAATCACATATTATTTCATG+TGG | - | chr8_2:21905402-21905421 | None:intergenic | 20.0% |
| !! | ATGTGAAGAATATTCTTATT+TGG | - | chr8_2:21905664-21905683 | None:intergenic | 20.0% |
| !! | TGAAAATTCACATATTTAAG+TGG | + | chr8_2:21905851-21905870 | Msa1239850:intron | 20.0% |
| !! | GAAAATTCACATATTTAAGT+GGG | + | chr8_2:21905852-21905871 | Msa1239850:intron | 20.0% |
| !! | AAAATTCACATATTTAAGTG+GGG | + | chr8_2:21905853-21905872 | Msa1239850:intron | 20.0% |
| !! | GTTAGACAAAATATTAAGAT+TGG | - | chr8_2:21905896-21905915 | None:intergenic | 20.0% |
| !! | AACTATTTGCTCTATTAATT+TGG | + | chr8_2:21906007-21906026 | Msa1239850:intron | 20.0% |
| !! | AATAATATATTATGAGTAGG+CGG | - | chr8_2:21906379-21906398 | None:intergenic | 20.0% |
| !!! | TTATTGGTTTAAATCATTGT+GGG | + | chr8_2:21906456-21906475 | Msa1239850:intron | 20.0% |
| !!! | ACATTGATTTCATCTAATAA+AGG | + | chr8_2:21906521-21906540 | Msa1239850:intron | 20.0% |
| !! | CATTCATCTATTAAAAAAAG+AGG | + | chr8_2:21906583-21906602 | Msa1239850:intron | 20.0% |
| !! | GAGGAAAATATATATACAAT+AGG | + | chr8_2:21906602-21906621 | Msa1239850:intron | 20.0% |
| !! | GGAAAATATATATACAATAG+GGG | + | chr8_2:21906604-21906623 | Msa1239850:intron | 20.0% |
| !! | GAAAATATATATACAATAGG+GGG | + | chr8_2:21906605-21906624 | Msa1239850:intron | 20.0% |
| !! | AAAATATATATACAATAGGG+GGG | + | chr8_2:21906606-21906625 | Msa1239850:intron | 20.0% |
| !! | AAGAAAACGAACAAAAAAAT+TGG | + | chr8_2:21906666-21906685 | Msa1239850:intron | 20.0% |
| !! | TTGTTTGTGTTATAAACATT+AGG | + | chr8_2:21906867-21906886 | Msa1239850:intron | 20.0% |
| !! | GTAACAAAGTCAAAATTAAA+TGG | - | chr8_2:21906899-21906918 | None:intergenic | 20.0% |
| !! | GAATTATACTAGTATATGAA+AGG | - | chr8_2:21906985-21907004 | None:intergenic | 20.0% |
| ! | CTACAACGAAGAAAAATTAA+AGG | - | chr8_2:21901421-21901440 | None:intergenic | 25.0% |
| !!! | CTCTCATTTTAAGTTGTTTT+AGG | + | chr8_2:21901467-21901486 | Msa1239850:intron | 25.0% |
| ! | ATGTTAATATCTTACCTTTG+TGG | + | chr8_2:21901499-21901518 | Msa1239850:intron | 25.0% |
| !!! | ATGTTTTGTTGCTTTTCTAA+AGG | + | chr8_2:21901659-21901678 | Msa1239850:intron | 25.0% |
| ! | CTTTCTTAACACATAATGTT+GGG | - | chr8_2:21901688-21901707 | None:intergenic | 25.0% |
| ! | ACTTTCTTAACACATAATGT+TGG | - | chr8_2:21901689-21901708 | None:intergenic | 25.0% |
| ! | ACAAAGTTAAACATAAAGAG+AGG | - | chr8_2:21901757-21901776 | None:intergenic | 25.0% |
| !! | ATTCACTATTGCATTAGTTT+GGG | + | chr8_2:21902256-21902275 | Msa1239850:intron | 25.0% |
| !! | AAATTTTCAGTCACAACTTT+TGG | + | chr8_2:21902396-21902415 | Msa1239850:intron | 25.0% |
| !!! | ATATAGAGTTTTGTTGACTA+TGG | + | chr8_2:21902817-21902836 | Msa1239850:intron | 25.0% |
| !!! | TAGCTTGTCTATATTTTACA+TGG | + | chr8_2:21902999-21903018 | Msa1239850:intron | 25.0% |
| ! | CGCAATTTCTTAAAAATTAG+AGG | + | chr8_2:21903541-21903560 | Msa1239850:intron | 25.0% |
| ! | TGATGCTAGTTATATAAATG+GGG | - | chr8_2:21903635-21903654 | None:intergenic | 25.0% |
| ! | TATAACTAGCATCAAAATGT+TGG | + | chr8_2:21903641-21903660 | Msa1239850:intron | 25.0% |
| ! | ATAACTAGCATCAAAATGTT+GGG | + | chr8_2:21903642-21903661 | Msa1239850:intron | 25.0% |
| ! | TGGTTAGGTATAAATTTCTA+AGG | + | chr8_2:21903688-21903707 | Msa1239850:intron | 25.0% |
| !!! | AGCATGCAATATTTTAAAAG+AGG | + | chr8_2:21903740-21903759 | Msa1239850:intron | 25.0% |
| !!! | TGCAATATTTTAAAAGAGGT+AGG | + | chr8_2:21903744-21903763 | Msa1239850:intron | 25.0% |
| !!! | AATATTTTAAAAGAGGTAGG+TGG | + | chr8_2:21903747-21903766 | Msa1239850:intron | 25.0% |
| ! | TACACTGTTTATGATAATTG+AGG | - | chr8_2:21904072-21904091 | None:intergenic | 25.0% |
| ! | AATTAGATTAACAAAGGTTC+TGG | + | chr8_2:21904150-21904169 | Msa1239850:intron | 25.0% |
| ! | ATTAGATTAACAAAGGTTCT+GGG | + | chr8_2:21904151-21904170 | Msa1239850:intron | 25.0% |
| !! | TAGCAGCGTTAAAAATTTTA+GGG | + | chr8_2:21904374-21904393 | Msa1239850:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr8_2:21904497-21904516 | None:intergenic | 25.0% |
| ! | CATTCAATTAATGATGTGTA+TGG | + | chr8_2:21904532-21904551 | Msa1239850:intron | 25.0% |
| ! | AATGTTCAAACAAATACACT+TGG | - | chr8_2:21904627-21904646 | None:intergenic | 25.0% |
| ! | AATGTTCAAACAAATACACT+CGG | - | chr8_2:21904627-21904646 | None:intergenic | 25.0% |
| !!! | TATAAAATTGGTTTTCTAGC+AGG | + | chr8_2:21904983-21905002 | Msa1239850:intron | 25.0% |
| !!! | ATAAAATTGGTTTTCTAGCA+GGG | + | chr8_2:21904984-21905003 | Msa1239850:intron | 25.0% |
| ! | AGTTAAAGAATGGAGTTATA+AGG | + | chr8_2:21905014-21905033 | Msa1239850:intron | 25.0% |
| ! | GTTAAAGAATGGAGTTATAA+GGG | + | chr8_2:21905015-21905034 | Msa1239850:intron | 25.0% |
| ! | TTAAAGAATGGAGTTATAAG+GGG | + | chr8_2:21905016-21905035 | Msa1239850:intron | 25.0% |
| ! | TATATGAACTAGTTAAAGCA+AGG | + | chr8_2:21905230-21905249 | Msa1239850:intron | 25.0% |
| ! | GCATTCATTATCTTTCAATT+AGG | + | chr8_2:21905453-21905472 | Msa1239850:intron | 25.0% |
| !! | CTTTTCCTTGTTCTATTATT+GGG | - | chr8_2:21905549-21905568 | None:intergenic | 25.0% |
| !! | ACTTTTCCTTGTTCTATTAT+TGG | - | chr8_2:21905550-21905569 | None:intergenic | 25.0% |
| !! | TAGTGGCATGTTTTATAATT+GGG | + | chr8_2:21905786-21905805 | Msa1239850:intron | 25.0% |
| !!! | CTATTTTTTAATAGACGAGA+TGG | + | chr8_2:21905815-21905834 | Msa1239850:intron | 25.0% |
| ! | AGCAAGACTCATTTATAATT+AGG | + | chr8_2:21906236-21906255 | Msa1239850:intron | 25.0% |
| ! | ATTTATAATTAGGAGTCAAC+CGG | + | chr8_2:21906246-21906265 | Msa1239850:intron | 25.0% |
| !!! | CTTATTGGTTTAAATCATTG+TGG | + | chr8_2:21906455-21906474 | Msa1239850:intron | 25.0% |
| !!! | CTTTTTTCCTTGATTTTTGA+GGG | - | chr8_2:21906642-21906661 | None:intergenic | 25.0% |
| !!! | TCTTTTTTCCTTGATTTTTG+AGG | - | chr8_2:21906643-21906662 | None:intergenic | 25.0% |
| !! | AATAATTTACTTAATGGGTC+TGG | + | chr8_2:21906949-21906968 | Msa1239850:intron | 25.0% |
| !!! | GAAGACAAACAATTTTAGTA+CGG | - | chr8_2:21907091-21907110 | None:intergenic | 25.0% |
| !! | AAAAAAATGGATTACTGTGG+AGG | + | chr8_2:21901057-21901076 | Msa1239850:exon | 30.0% |
| ! | TTGAGAAGAAAGTGTGTAAA+AGG | + | chr8_2:21901135-21901154 | Msa1239850:CDS | 30.0% |
| ! | CTTAAAATGAGAGAAGCATA+AGG | - | chr8_2:21901460-21901479 | None:intergenic | 30.0% |
| AGGTAAAGATAAACTCATGT+TGG | - | chr8_2:21901633-21901652 | None:intergenic | 30.0% | |
| TGAGTTTATCTTTACCTCTT+TGG | + | chr8_2:21901636-21901655 | Msa1239850:intron | 30.0% | |
| ATAAAGAGAGGAAGTTACTA+GGG | - | chr8_2:21901745-21901764 | None:intergenic | 30.0% | |
| CGCTAATCTTGCTTATATAT+TGG | + | chr8_2:21901823-21901842 | Msa1239850:intron | 30.0% | |
| !! | AGTTAAGCATTTTAACGTGA+TGG | + | chr8_2:21901971-21901990 | Msa1239850:intron | 30.0% |
| CATTCACTATTGCATTAGTT+TGG | + | chr8_2:21902255-21902274 | Msa1239850:intron | 30.0% | |
| ! | ACAATAATCACTGTTTTCGT+AGG | + | chr8_2:21902899-21902918 | Msa1239850:intron | 30.0% |
| GAAAGCAAATAGTACATTGT+AGG | - | chr8_2:21902969-21902988 | None:intergenic | 30.0% | |
| AATACCTACCTACACTTATA+GGG | - | chr8_2:21903045-21903064 | None:intergenic | 30.0% | |
| TAATACCTACCTACACTTAT+AGG | - | chr8_2:21903046-21903065 | None:intergenic | 30.0% | |
| TAGGTAGGTATTATGTTTCA+CGG | + | chr8_2:21903053-21903072 | Msa1239850:intron | 30.0% | |
| !! | AGAGTATCTAACTAGTGTTT+TGG | - | chr8_2:21903190-21903209 | None:intergenic | 30.0% |
| ! | TTTTGCAACTATACCAGTTT+TGG | - | chr8_2:21903479-21903498 | None:intergenic | 30.0% |
| TGGTATAGTTGCAAAACTTA+AGG | + | chr8_2:21903483-21903502 | Msa1239850:intron | 30.0% | |
| GGTATAGTTGCAAAACTTAA+GGG | + | chr8_2:21903484-21903503 | Msa1239850:intron | 30.0% | |
| AAGACTATGAGTCAAAGAAA+TGG | + | chr8_2:21904026-21904045 | Msa1239850:intron | 30.0% | |
| AGACTATGAGTCAAAGAAAT+GGG | + | chr8_2:21904027-21904046 | Msa1239850:intron | 30.0% | |
| TTTGTACACTTGTAACATTG+TGG | + | chr8_2:21904296-21904315 | Msa1239850:intron | 30.0% | |
| ! | GTAGCAGCGTTAAAAATTTT+AGG | + | chr8_2:21904373-21904392 | Msa1239850:intron | 30.0% |
| ! | ATATTCCAGAGAAGTATATG+AGG | + | chr8_2:21904957-21904976 | Msa1239850:intron | 30.0% |
| TACAAGTTAGCATAACTCAT+TGG | - | chr8_2:21905120-21905139 | None:intergenic | 30.0% | |
| ATGTGGATGAATATCTAAAG+AGG | - | chr8_2:21905385-21905404 | None:intergenic | 30.0% | |
| TCATTATCTTTCAATTAGGC+CGG | + | chr8_2:21905457-21905476 | Msa1239850:intron | 30.0% | |
| GTAACTTATCACTTAGACAA+TGG | - | chr8_2:21905486-21905505 | None:intergenic | 30.0% | |
| GTACTTAATTCGTATTTGGT+TGG | - | chr8_2:21905508-21905527 | None:intergenic | 30.0% | |
| GTGAGTACTTAATTCGTATT+TGG | - | chr8_2:21905512-21905531 | None:intergenic | 30.0% | |
| TAGAACAAGGAAAAGTTGTT+TGG | + | chr8_2:21905554-21905573 | Msa1239850:intron | 30.0% | |
| TCACATGCATGTACATAATT+TGG | + | chr8_2:21905678-21905697 | Msa1239850:intron | 30.0% | |
| ! | CTAGTGGCATGTTTTATAAT+TGG | + | chr8_2:21905785-21905804 | Msa1239850:intron | 30.0% |
| ! | AGTGGCATGTTTTATAATTG+GGG | + | chr8_2:21905787-21905806 | Msa1239850:intron | 30.0% |
| ! | GTAATTGTTGCATTGACAAA+AGG | + | chr8_2:21906155-21906174 | Msa1239850:intron | 30.0% |
| TAATCTTTAAACAAGCCCTT+AGG | + | chr8_2:21906204-21906223 | Msa1239850:intron | 30.0% | |
| AATCTTTAAACAAGCCCTTA+GGG | + | chr8_2:21906205-21906224 | Msa1239850:intron | 30.0% | |
| TTTATAATTAGGAGTCAACC+GGG | + | chr8_2:21906247-21906266 | Msa1239850:intron | 30.0% | |
| CATATGTAAACCATTTGAGT+AGG | - | chr8_2:21906278-21906297 | None:intergenic | 30.0% | |
| TCTAATACTCACTCTCTTAT+TGG | + | chr8_2:21906440-21906459 | Msa1239850:intron | 30.0% | |
| ! | ATACATTTGGAACCTCAAAT+TGG | - | chr8_2:21906833-21906852 | None:intergenic | 30.0% |
| ACGTAAACAAAGCATACATT+TGG | - | chr8_2:21906846-21906865 | None:intergenic | 30.0% | |
| ! | AATGTGTTTTGCTTCTGATA+AGG | - | chr8_2:21907291-21907310 | None:intergenic | 30.0% |
| AGTAACTAGTGAGAATTAGA+TGG | - | chr8_2:21907675-21907694 | None:intergenic | 30.0% | |
| CCTTGGTCTGAATCAAAATA+TGG | - | chr8_2:21901174-21901193 | None:intergenic | 35.0% | |
| !!! | CCATATTTTGATTCAGACCA+AGG | + | chr8_2:21901171-21901190 | Msa1239850:CDS | 35.0% |
| !! | TTTTGATTCAGACCAAGGAA+CGG | + | chr8_2:21901176-21901195 | Msa1239850:CDS | 35.0% |
| AATACGCATGAGTAACTTAG+AGG | - | chr8_2:21901244-21901263 | None:intergenic | 35.0% | |
| TATCTTTGCACTTCAACAAC+AGG | + | chr8_2:21901353-21901372 | Msa1239850:CDS | 35.0% | |
| AAGCAACAAAACATCCAAAG+AGG | - | chr8_2:21901653-21901672 | None:intergenic | 35.0% | |
| CATAAAGAGAGGAAGTTACT+AGG | - | chr8_2:21901746-21901765 | None:intergenic | 35.0% | |
| AATAGTGAATGCACAATAGG+TGG | - | chr8_2:21902246-21902265 | None:intergenic | 35.0% | |
| TGCAATAGTGAATGCACAAT+AGG | - | chr8_2:21902249-21902268 | None:intergenic | 35.0% | |
| !! | CTTTTAAGTCAACTCATGAG+TGG | - | chr8_2:21902658-21902677 | None:intergenic | 35.0% |
| ! | ACATGGATGCTACTTAACTA+AGG | + | chr8_2:21903016-21903035 | Msa1239850:intron | 35.0% |
| ATACCTACCTACACTTATAG+GGG | - | chr8_2:21903044-21903063 | None:intergenic | 35.0% | |
| TCGCAACTTTGGTAAAGTTA+GGG | - | chr8_2:21903296-21903315 | None:intergenic | 35.0% | |
| ATCGCAACTTTGGTAAAGTT+AGG | - | chr8_2:21903297-21903316 | None:intergenic | 35.0% | |
| ! | CTTTACCAAAGTTGCGATTT+TGG | + | chr8_2:21903299-21903318 | Msa1239850:intron | 35.0% |
| GCACATGTGCAAAATTTAAG+GGG | - | chr8_2:21903353-21903372 | None:intergenic | 35.0% | |
| GGCACATGTGCAAAATTTAA+GGG | - | chr8_2:21903354-21903373 | None:intergenic | 35.0% | |
| TGGCACATGTGCAAAATTTA+AGG | - | chr8_2:21903355-21903374 | None:intergenic | 35.0% | |
| AGCGTAGATCAAGTCAAAAT+TGG | - | chr8_2:21903394-21903413 | None:intergenic | 35.0% | |
| TAGTTGCAAAACTTAAGGGA+CGG | + | chr8_2:21903488-21903507 | Msa1239850:intron | 35.0% | |
| !! | ATTTTAAAAGAGGTAGGTGG+TGG | + | chr8_2:21903750-21903769 | Msa1239850:intron | 35.0% |
| ! | ATTTCATTGCTTGTTAGCTC+CGG | - | chr8_2:21903827-21903846 | None:intergenic | 35.0% |
| GACTATGAGTCAAAGAAATG+GGG | + | chr8_2:21904028-21904047 | Msa1239850:intron | 35.0% | |
| TACACTTGTAACATTGTGGT+TGG | + | chr8_2:21904300-21904319 | Msa1239850:intron | 35.0% | |
| ATAATACTTGGGTGACATTG+TGG | - | chr8_2:21904338-21904357 | None:intergenic | 35.0% | |
| CCAAGACTGTGATAATACTT+GGG | - | chr8_2:21904349-21904368 | None:intergenic | 35.0% | |
| CCAAGTATTATCACAGTCTT+GGG | + | chr8_2:21904347-21904366 | Msa1239850:intron | 35.0% | |
| TATCACCTCATATACTTCTC+TGG | - | chr8_2:21904965-21904984 | None:intergenic | 35.0% | |
| ATCACTTAGACAATGGAATC+CGG | - | chr8_2:21905479-21905498 | None:intergenic | 35.0% | |
| CTCTACCCAATAATAGAACA+AGG | + | chr8_2:21905541-21905560 | Msa1239850:intron | 35.0% | |
| ! | CTCTGACATTTTCTTACTAG+TGG | + | chr8_2:21905769-21905788 | Msa1239850:intron | 35.0% |
| ACATATTTAAGTGGGGAAGT+TGG | + | chr8_2:21905860-21905879 | Msa1239850:intron | 35.0% | |
| GAATGCTAACTAGTGTCTAT+AGG | + | chr8_2:21906061-21906080 | Msa1239850:intron | 35.0% | |
| GATAAGCCAAGAAATAGTTG+AGG | + | chr8_2:21906315-21906334 | Msa1239850:intron | 35.0% | |
| ! | TTGATGCCTCAACTATTTCT+TGG | - | chr8_2:21906324-21906343 | None:intergenic | 35.0% |
| ! | AAGAAATAGTTGAGGCATCA+AGG | + | chr8_2:21906323-21906342 | Msa1239850:intron | 35.0% |
| TATGTTCCACTACTTTGTAG+GGG | - | chr8_2:21906502-21906521 | None:intergenic | 35.0% | |
| GTATGTTCCACTACTTTGTA+GGG | - | chr8_2:21906503-21906522 | None:intergenic | 35.0% | |
| TGTATGTTCCACTACTTTGT+AGG | - | chr8_2:21906504-21906523 | None:intergenic | 35.0% | |
| ACCAAAACCCTCAAAAATCA+AGG | + | chr8_2:21906632-21906651 | Msa1239850:intron | 35.0% | |
| !! | TCCTTGATTTTTGAGGGTTT+TGG | - | chr8_2:21906636-21906655 | None:intergenic | 35.0% |
| TCATGATGTCTTCCAATTTG+AGG | + | chr8_2:21906818-21906837 | Msa1239850:intron | 35.0% | |
| AAAGCTAATTAACATCCTGG+AGG | - | chr8_2:21907067-21907086 | None:intergenic | 35.0% | |
| GGAAAAGCTAATTAACATCC+TGG | - | chr8_2:21907070-21907089 | None:intergenic | 35.0% | |
| TCATATGTCTTTGACACTCT+AGG | + | chr8_2:21907135-21907154 | Msa1239850:intron | 35.0% | |
| CATATGTCTTTGACACTCTA+GGG | + | chr8_2:21907136-21907155 | Msa1239850:intron | 35.0% | |
| TATTCCAATGCACTCAACTA+AGG | - | chr8_2:21907252-21907271 | None:intergenic | 35.0% | |
| ! | TATTGAATTTTGTATGGCGC+AGG | + | chr8_2:21907329-21907348 | Msa1239850:intron | 35.0% |
| AAAATGCATGGACATGTTAG+AGG | - | chr8_2:21907517-21907536 | None:intergenic | 35.0% | |
| TTGATGAGGATCAAAATGCA+TGG | - | chr8_2:21907529-21907548 | None:intergenic | 35.0% | |
| GATTACTGTGGAGGAAAGAT+TGG | + | chr8_2:21901066-21901085 | Msa1239850:CDS | 40.0% | |
| ATTGGTGGAAGTGATCAAAG+AGG | + | chr8_2:21901084-21901103 | Msa1239850:CDS | 40.0% | |
| AAAAACTTGCAAGCACCACA+AGG | - | chr8_2:21901117-21901136 | None:intergenic | 40.0% | |
| ! | GCAGCAGTTCATAAAGTGTT+TGG | + | chr8_2:21901207-21901226 | Msa1239850:CDS | 40.0% |
| ! | TTTGCTATGAAGCTCTTGCT+AGG | + | chr8_2:21901298-21901317 | Msa1239850:CDS | 40.0% |
| TTGCTATGAAGCTCTTGCTA+GGG | + | chr8_2:21901299-21901318 | Msa1239850:CDS | 40.0% | |
| GAGCAACACAACCATAAACA+GGG | - | chr8_2:21901332-21901351 | None:intergenic | 40.0% | |
| TGAGCAACACAACCATAAAC+AGG | - | chr8_2:21901333-21901352 | None:intergenic | 40.0% | |
| TAGGGCACATATTCTTTGTG+TGG | - | chr8_2:21901727-21901746 | None:intergenic | 40.0% | |
| ! | CGAGTATTTTCACGTCTTGA+AGG | - | chr8_2:21901805-21901824 | None:intergenic | 40.0% |
| ! | TAAGGTACCCCTATAAGTGT+AGG | + | chr8_2:21903034-21903053 | Msa1239850:intron | 40.0% |
| GCAACTTTGGTAAAGTTAGG+GGG | - | chr8_2:21903294-21903313 | None:intergenic | 40.0% | |
| CGCAACTTTGGTAAAGTTAG+GGG | - | chr8_2:21903295-21903314 | None:intergenic | 40.0% | |
| ATGAGCCAAAATCGCAACTT+TGG | - | chr8_2:21903307-21903326 | None:intergenic | 40.0% | |
| CATGTGCAAAATTTAAGGGG+CGG | - | chr8_2:21903350-21903369 | None:intergenic | 40.0% | |
| ! | TTTTGCACATGTGCCAGTTT+TGG | + | chr8_2:21903359-21903378 | Msa1239850:intron | 40.0% |
| ! | GATCAAGTCAAAATTGGCCT+TGG | - | chr8_2:21903388-21903407 | None:intergenic | 40.0% |
| TCATTGACATACTCAAGCTC+AGG | + | chr8_2:21903593-21903612 | Msa1239850:intron | 40.0% | |
| AGAAATGGGGCTAAAGACTA+AGG | + | chr8_2:21904041-21904060 | Msa1239850:intron | 40.0% | |
| CCCAAGTATTATCACAGTCT+TGG | + | chr8_2:21904346-21904365 | Msa1239850:intron | 40.0% | |
| CCCAAGACTGTGATAATACT+TGG | - | chr8_2:21904350-21904369 | None:intergenic | 40.0% | |
| TAATTCTTATGTCCACCCTC+CGG | + | chr8_2:21904475-21904494 | Msa1239850:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr8_2:21904493-21904512 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr8_2:21904494-21904513 | None:intergenic | 40.0% | |
| GGGACATTGGAGTTAAAGAA+TGG | + | chr8_2:21905004-21905023 | Msa1239850:intron | 40.0% | |
| AGTCATGTTAACAGTGTCTC+AGG | - | chr8_2:21905144-21905163 | None:intergenic | 40.0% | |
| ! | CCATTTGAGTAGGTTTTTCC+CGG | - | chr8_2:21906268-21906287 | None:intergenic | 40.0% |
| ATATTATGAGTAGGCGGTAG+AGG | - | chr8_2:21906373-21906392 | None:intergenic | 40.0% | |
| ATTGAACCCCTACAAAGTAG+TGG | + | chr8_2:21906493-21906512 | Msa1239850:intron | 40.0% | |
| ! | AAAAATTGGCCTAGCAGAGA+CGG | + | chr8_2:21906680-21906699 | Msa1239850:intron | 40.0% |
| TCCTACAACACTCGTTCTAA+GGG | - | chr8_2:21906731-21906750 | None:intergenic | 40.0% | |
| TTCCTACAACACTCGTTCTA+AGG | - | chr8_2:21906732-21906751 | None:intergenic | 40.0% | |
| ATAATAGCATGATCACCTCC+AGG | + | chr8_2:21907049-21907068 | Msa1239850:intron | 40.0% | |
| !!! | ATTGTTTTGACGCCATCGAA+AGG | - | chr8_2:21907185-21907204 | None:intergenic | 40.0% |
| GATGGCGTCAAAACAATGTT+TGG | + | chr8_2:21907188-21907207 | Msa1239850:intron | 40.0% | |
| TAGTCCTTAGTTGAGTGCAT+TGG | + | chr8_2:21907245-21907264 | Msa1239850:intron | 40.0% | |
| ! | AACTTGGTGAAGAGCTTTGA+GGG | - | chr8_2:21907446-21907465 | None:intergenic | 40.0% |
| ! | AAACTTGGTGAAGAGCTTTG+AGG | - | chr8_2:21907447-21907466 | None:intergenic | 40.0% |
| TCTGAGGAGGAATGAAAACT+TGG | - | chr8_2:21907462-21907481 | None:intergenic | 40.0% | |
| ATTTGTTCCCAAGTGATCTG+AGG | - | chr8_2:21907478-21907497 | None:intergenic | 40.0% | |
| ! | AGTGATGAAAGTGGTTGATG+AGG | - | chr8_2:21907543-21907562 | None:intergenic | 40.0% |
| TCATCAACCACTTTCATCAC+TGG | + | chr8_2:21907542-21907561 | Msa1239850:CDS | 40.0% | |
| ! | TGATGATGAACTCCAAGCTT+TGG | + | chr8_2:21907605-21907624 | Msa1239850:CDS | 40.0% |
| ACTAGTGAGAATTAGATGGC+TGG | - | chr8_2:21907671-21907690 | None:intergenic | 40.0% | |
| TACTGTGGAGGAAAGATTGG+TGG | + | chr8_2:21901069-21901088 | Msa1239850:CDS | 45.0% | |
| GAAGTGATCAAAGAGGTGGT+GGG | + | chr8_2:21901091-21901110 | Msa1239850:CDS | 45.0% | |
| CTGCAAAATGAACCGTTCCT+TGG | - | chr8_2:21901191-21901210 | None:intergenic | 45.0% | |
| GCATCAAGACGTTTATGAGC+TGG | - | chr8_2:21901267-21901286 | None:intergenic | 45.0% | |
| AAGCGACAATACTAGAGTGC+AGG | - | chr8_2:21902878-21902897 | None:intergenic | 45.0% | |
| GTACCCCTATAAGTGTAGGT+AGG | + | chr8_2:21903038-21903057 | Msa1239850:intron | 45.0% | |
| !! | CAAGTCAAAATTGGCCTTGG+AGG | - | chr8_2:21903385-21903404 | None:intergenic | 45.0% |
| GTAGCATTTGGGTGACATTG+TGG | + | chr8_2:21904193-21904212 | Msa1239850:intron | 45.0% | |
| CATTTGGGTGACATTGTGGT+TGG | + | chr8_2:21904197-21904216 | Msa1239850:intron | 45.0% | |
| !! | GACATTGTGGTTGGTGACAT+TGG | + | chr8_2:21904206-21904225 | Msa1239850:intron | 45.0% |
| !! | GTTGGTGACATTGGTGACAT+TGG | + | chr8_2:21904215-21904234 | Msa1239850:intron | 45.0% |
| GAAAGCCACATGTGACATTG+TGG | - | chr8_2:21904245-21904264 | None:intergenic | 45.0% | |
| TACTTGGGTGACATTGTGGT+TGG | - | chr8_2:21904334-21904353 | None:intergenic | 45.0% | |
| TTAGTCTCTGCAGTTACACG+CGG | + | chr8_2:21904437-21904456 | Msa1239850:intron | 45.0% | |
| TTATAATAGTGACCGGAGGG+TGG | - | chr8_2:21904490-21904509 | None:intergenic | 45.0% | |
| !! | TGGTTTTCTAGCAGGGACAT+TGG | + | chr8_2:21904991-21905010 | Msa1239850:intron | 45.0% |
| CTTGCTAACTACAGCCCTAA+GGG | - | chr8_2:21906222-21906241 | None:intergenic | 45.0% | |
| TCTTGCTAACTACAGCCCTA+AGG | - | chr8_2:21906223-21906242 | None:intergenic | 45.0% | |
| CCGGGAAAAACCTACTCAAA+TGG | + | chr8_2:21906265-21906284 | Msa1239850:intron | 45.0% | |
| GGTGTAGTTCAACCACTCTT+GGG | + | chr8_2:21906701-21906720 | Msa1239850:intron | 45.0% | |
| ! | ACCCTTAGAACGAGTGTTGT+AGG | + | chr8_2:21906727-21906746 | Msa1239850:intron | 45.0% |
| GGACTAATCACTATCGCCAT+GGG | - | chr8_2:21907231-21907250 | None:intergenic | 45.0% | |
| AGGACTAATCACTATCGCCA+TGG | - | chr8_2:21907232-21907251 | None:intergenic | 45.0% | |
| GAGATGGAGCTAGCGATATT+GGG | - | chr8_2:21907416-21907435 | None:intergenic | 45.0% | |
| AGAGATGGAGCTAGCGATAT+TGG | - | chr8_2:21907417-21907436 | None:intergenic | 45.0% | |
| ! | CTTTGAGGGTTTGGAAGAGA+TGG | - | chr8_2:21907432-21907451 | None:intergenic | 45.0% |
| TCATTCCTCCTCAGATCACT+TGG | + | chr8_2:21907467-21907486 | Msa1239850:CDS | 45.0% | |
| CATTCCTCCTCAGATCACTT+GGG | + | chr8_2:21907468-21907487 | Msa1239850:CDS | 45.0% | |
| CTCAAGTCCAGTGATGAAAG+TGG | - | chr8_2:21907552-21907571 | None:intergenic | 45.0% | |
| CAAATTCTCGAGCCAAAGCT+TGG | - | chr8_2:21907620-21907639 | None:intergenic | 45.0% | |
| TGGCTCGAGAATTTGTCTCT+AGG | + | chr8_2:21907625-21907644 | Msa1239850:CDS | 45.0% | |
| TTTGTCTCTAGGTACTTGCC+TGG | + | chr8_2:21907636-21907655 | Msa1239850:CDS | 45.0% | |
| !! | TTAAAATTGATTATTATTAA+GGG | + | chr8_2:21902289-21902308 | Msa1239850:intron | 5.0% |
| !!! | ATTTTCTATTTTATTTATAA+TGG | + | chr8_2:21906037-21906056 | Msa1239850:intron | 5.0% |
| GGTGGAAGTGATCAAAGAGG+TGG | + | chr8_2:21901087-21901106 | Msa1239850:CDS | 50.0% | |
| GGAAGTGATCAAAGAGGTGG+TGG | + | chr8_2:21901090-21901109 | Msa1239850:CDS | 50.0% | |
| AGGGCTAGAGACCCTGTTTA+TGG | + | chr8_2:21901318-21901337 | Msa1239850:CDS | 50.0% | |
| TGACTTGATCTACGCTGACG+TGG | + | chr8_2:21903398-21903417 | Msa1239850:intron | 50.0% | |
| AACACGTGGCACCTCACTTA+AGG | - | chr8_2:21903426-21903445 | None:intergenic | 50.0% | |
| !! | TTTGCTTTGGGGGCCAAAAC+TGG | + | chr8_2:21903463-21903482 | Msa1239850:intron | 50.0% |
| TGTTAGCAGCCAACTGGGTA+CGG | + | chr8_2:21903773-21903792 | Msa1239850:intron | 50.0% | |
| AAGCAACAGACAGTTCTCCG+TGG | - | chr8_2:21903803-21903822 | None:intergenic | 50.0% | |
| ! | GAGAACTGTCTGTTGCTTGC+CGG | + | chr8_2:21903805-21903824 | Msa1239850:intron | 50.0% |
| GCCAACCACAATGTCACATG+TGG | + | chr8_2:21904237-21904256 | Msa1239850:intron | 50.0% | |
| GCCACATGTGACATTGTGGT+TGG | - | chr8_2:21904241-21904260 | None:intergenic | 50.0% | |
| GGCATCAAGGTGACTCTGAA+AGG | + | chr8_2:21906336-21906355 | Msa1239850:intron | 50.0% | |
| TGAACTACACCGTCTCTGCT+AGG | - | chr8_2:21906692-21906711 | None:intergenic | 50.0% | |
| CGGTGTAGTTCAACCACTCT+TGG | + | chr8_2:21906700-21906719 | Msa1239850:intron | 50.0% | |
| TCTAAGGGTGAACCCAAGAG+TGG | - | chr8_2:21906716-21906735 | None:intergenic | 50.0% | |
| !! | TTGACACTCTAGGGTCGATC+TGG | + | chr8_2:21907145-21907164 | Msa1239850:intron | 50.0% |
| CTCCTAGGTTCACCTTTCGA+TGG | + | chr8_2:21907170-21907189 | Msa1239850:intron | 50.0% | |
| CTAATCACTATCGCCATGGG+TGG | - | chr8_2:21907228-21907247 | None:intergenic | 50.0% | |
| CGCAAGAGTGGCTTGAACAT+AGG | - | chr8_2:21907379-21907398 | None:intergenic | 50.0% | |
| ATGGAGCTAGCGATATTGGG+AGG | - | chr8_2:21907413-21907432 | None:intergenic | 50.0% | |
| !! | GGTGAAGAGCTTTGAGGGTT+TGG | - | chr8_2:21907441-21907460 | None:intergenic | 50.0% |
| TGTTCCCAAGTGATCTGAGG+AGG | - | chr8_2:21907475-21907494 | None:intergenic | 50.0% | |
| GATGGCTGGAATCTTACTCC+AGG | - | chr8_2:21907657-21907676 | None:intergenic | 50.0% | |
| GATCATGCTAACGTGCACCG+TGG | + | chr8_2:21902844-21902863 | Msa1239850:intron | 55.0% | |
| GAGTGCAGGACTTTGCACCA+CGG | - | chr8_2:21902864-21902883 | None:intergenic | 55.0% | |
| !! | TGTGCCAGTTTTGGCCTCCA+AGG | + | chr8_2:21903368-21903387 | Msa1239850:intron | 55.0% |
| !! | TTGGCCTTGGAGGCCAAAAC+TGG | - | chr8_2:21903375-21903394 | None:intergenic | 55.0% |
| CTGACGTGGCACCTTAAGTG+AGG | + | chr8_2:21903412-21903431 | Msa1239850:intron | 55.0% | |
| ! | TGGTGGTGTTAGCAGCCAAC+TGG | + | chr8_2:21903767-21903786 | Msa1239850:intron | 55.0% |
| ! | GGTGGTGTTAGCAGCCAACT+GGG | + | chr8_2:21903768-21903787 | Msa1239850:intron | 55.0% |
| TCTGGGTTCGAATCCAGCCT+TGG | + | chr8_2:21904168-21904187 | Msa1239850:intron | 55.0% | |
| CTGGGTTCGAATCCAGCCTT+GGG | + | chr8_2:21904169-21904188 | Msa1239850:intron | 55.0% | |
| TGGGTTCGAATCCAGCCTTG+GGG | + | chr8_2:21904170-21904189 | Msa1239850:intron | 55.0% | |
| CAGCCTTGGGGGTAGCATTT+GGG | + | chr8_2:21904182-21904201 | Msa1239850:intron | 55.0% | |
| TCACCCAAATGCTACCCCCA+AGG | - | chr8_2:21904188-21904207 | None:intergenic | 55.0% | |
| CGCCATCGAAAGGTGAACCT+AGG | - | chr8_2:21907175-21907194 | None:intergenic | 55.0% | |
| AACAATGTTTGGCCAGCGCG+CGG | + | chr8_2:21907199-21907218 | Msa1239850:intron | 55.0% | |
| !! | CAAAGAGGTGGTGGGCCTTG+TGG | + | chr8_2:21901099-21901118 | Msa1239850:CDS | 60.0% |
| CAACTGGGTACGGCTGACCA+CGG | + | chr8_2:21903783-21903802 | Msa1239850:intron | 60.0% | |
| GGGTTCGAATCCAGCCTTGG+GGG | + | chr8_2:21904171-21904190 | Msa1239850:intron | 60.0% | |
| CCAAATGCTACCCCCAAGGC+TGG | - | chr8_2:21904184-21904203 | None:intergenic | 60.0% | |
| CCAGCCTTGGGGGTAGCATT+TGG | + | chr8_2:21904181-21904200 | Msa1239850:intron | 60.0% | |
| GTCTCTGCAGTTACACGCGG+AGG | + | chr8_2:21904440-21904459 | Msa1239850:intron | 60.0% | |
| AGGGTCGATCTGGTGCTCCT+AGG | + | chr8_2:21907155-21907174 | Msa1239850:intron | 60.0% | |
| GGCGCAGGTTATGAGCTTGC+AGG | + | chr8_2:21907344-21907363 | Msa1239850:intron | 60.0% | |
| GCGCTGCATTGTCGCAAGAG+TGG | - | chr8_2:21907391-21907410 | None:intergenic | 60.0% | |
| CGTGGTCAGCCGTACCCAGT+TGG | - | chr8_2:21903785-21903804 | None:intergenic | 65.0% | |
| CATGGGTGGCTACCGCGCGC+TGG | - | chr8_2:21907214-21907233 | None:intergenic | 75.0% | |
| CAGCGCGCGGTAGCCACCCA+TGG | + | chr8_2:21907212-21907231 | Msa1239850:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 21901057 | 21907715 | 21901057 | ID=Msa1239850;Name=Msa1239850 |
| chr8_2 | mRNA | 21901057 | 21907715 | 21901057 | ID=Msa1239850-mRNA-1;Parent=Msa1239850;Name=Msa1239850-mRNA-1;_AED=0.01;_eAED=0.01;_QI=6|1|1|1|1|1|2|26|216 |
| chr8_2 | exon | 21901057 | 21901374 | 21901057 | ID=Msa1239850-mRNA-1:exon:7830;Parent=Msa1239850-mRNA-1 |
| chr8_2 | exon | 21907351 | 21907715 | 21907351 | ID=Msa1239850-mRNA-1:exon:7831;Parent=Msa1239850-mRNA-1 |
| chr8_2 | five_prime_UTR | 21901057 | 21901062 | 21901057 | ID=Msa1239850-mRNA-1:five_prime_utr;Parent=Msa1239850-mRNA-1 |
| chr8_2 | CDS | 21901063 | 21901374 | 21901063 | ID=Msa1239850-mRNA-1:cds;Parent=Msa1239850-mRNA-1 |
| chr8_2 | CDS | 21907351 | 21907689 | 21907351 | ID=Msa1239850-mRNA-1:cds;Parent=Msa1239850-mRNA-1 |
| chr8_2 | three_prime_UTR | 21907690 | 21907715 | 21907690 | ID=Msa1239850-mRNA-1:three_prime_utr;Parent=Msa1239850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
