Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241920 | GAU33357.1 | 66.488 | 561 | 134 | 5 | 1 | 511 | 171 | 727 | 0.0 | 678 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241920 | A0A2Z6NTI1 | 66.488 | 561 | 134 | 5 | 1 | 511 | 171 | 727 | 0.0 | 678 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1241920 | Msa1241930 | 0.820867 | 5.467420e-53 | -8.615850e-47 |
| Msa1241920 | Msa1334190 | 0.812090 | 5.048762e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241920 | MtrunA17_Chr8g0354701 | 58.812 | 522 | 200 | 5 | 1 | 509 | 944 | 1463 | 0.0 | 556 |
| Msa1241920 | MtrunA17_Chr8g0354711 | 55.513 | 526 | 216 | 6 | 1 | 509 | 939 | 1463 | 1.04e-174 | 530 |
| Msa1241920 | MtrunA17_Chr8g0354721 | 49.822 | 562 | 200 | 12 | 4 | 508 | 952 | 1488 | 4.99e-147 | 457 |
| Msa1241920 | MtrunA17_Chr8g0354671 | 46.649 | 388 | 152 | 4 | 175 | 512 | 2 | 384 | 9.19e-98 | 300 |
| Msa1241920 | MtrunA17_Chr8g0353381 | 40.940 | 149 | 79 | 5 | 2 | 146 | 15 | 158 | 1.83e-28 | 110 |
| Msa1241920 | MtrunA17_Chr8g0353371 | 41.611 | 149 | 78 | 5 | 2 | 146 | 964 | 1107 | 3.17e-25 | 110 |
| Msa1241920 | MtrunA17_Chr8g0354681 | 53.271 | 107 | 43 | 3 | 1 | 107 | 953 | 1052 | 5.23e-25 | 109 |
| Msa1241920 | MtrunA17_Chr1g0153501 | 34.615 | 156 | 85 | 5 | 2 | 155 | 13 | 153 | 1.36e-19 | 85.9 |
| Msa1241920 | MtrunA17_Chr8g0371711 | 36.054 | 147 | 84 | 3 | 1 | 146 | 902 | 1039 | 1.75e-19 | 92.4 |
| Msa1241920 | MtrunA17_Chr6g0482141 | 33.962 | 159 | 90 | 4 | 2 | 159 | 1062 | 1206 | 2.78e-19 | 92.0 |
| Msa1241920 | MtrunA17_Chr6g0482461 | 36.250 | 160 | 77 | 7 | 2 | 153 | 542 | 684 | 8.30e-18 | 86.7 |
| Msa1241920 | MtrunA17_Chr3g0077971 | 35.762 | 151 | 74 | 6 | 2 | 146 | 1424 | 1557 | 2.61e-16 | 82.4 |
| Msa1241920 | MtrunA17_Chr8g0350801 | 33.951 | 162 | 77 | 7 | 2 | 152 | 941 | 1083 | 8.41e-16 | 80.9 |
| Msa1241920 | MtrunA17_Chr1g0172541 | 32.075 | 159 | 91 | 4 | 2 | 157 | 1000 | 1144 | 1.20e-14 | 77.0 |
| Msa1241920 | MtrunA17_Chr6g0482491 | 34.667 | 150 | 81 | 4 | 2 | 148 | 1143 | 1278 | 3.06e-14 | 75.9 |
| Msa1241920 | MtrunA17_Chr6g0482321 | 34.228 | 149 | 81 | 5 | 2 | 146 | 1009 | 1144 | 5.25e-14 | 75.1 |
| Msa1241920 | MtrunA17_Chr3g0081531 | 27.451 | 153 | 88 | 5 | 5 | 147 | 894 | 1033 | 6.44e-14 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 118 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAGAATCGATATCTTTC+TGG | 0.159465 | 8_2:+25810723 | Msa1241920:CDS |
| ACTTGTCTCTGTCTTGTTAT+TGG | 0.169137 | 8_2:+25810767 | Msa1241920:CDS |
| ACTATATTTGGAAGCCAATT+TGG | 0.175833 | 8_2:-25811029 | None:intergenic |
| TACATGTATTCCACTATATT+TGG | 0.194986 | 8_2:-25811041 | None:intergenic |
| CAATTCCCTGGAGTTGTTAA+TGG | 0.204903 | 8_2:+25811663 | Msa1241920:CDS |
| CCTTTACTCACATCAGTAAT+TGG | 0.224294 | 8_2:-25811340 | None:intergenic |
| TTCACACTTTGCGAAGAATT+TGG | 0.225956 | 8_2:-25811106 | None:intergenic |
| CACAGTCTCTTCCTTAATTC+TGG | 0.240882 | 8_2:-25811899 | None:intergenic |
| TGGTTTACACACCATATAAA+TGG | 0.269028 | 8_2:+25810704 | Msa1241920:CDS |
| AAGAATTTGGTTCGATGAAT+TGG | 0.270567 | 8_2:-25811093 | None:intergenic |
| TTAGCTGGAACTATTAGTTT+AGG | 0.277970 | 8_2:-25811370 | None:intergenic |
| TCATATGGAACTGGTTGTTT+AGG | 0.280828 | 8_2:-25812263 | None:intergenic |
| GAATTCTTGGAATGATAAAA+AGG | 0.283256 | 8_2:-25811824 | None:intergenic |
| TAGCTGGAACTATTAGTTTA+GGG | 0.287761 | 8_2:-25811369 | None:intergenic |
| CAGCAGCAGTTCGGAATTCT+TGG | 0.292056 | 8_2:-25811837 | None:intergenic |
| AAATGGGTTCCCAACCAAAT+TGG | 0.303583 | 8_2:+25811015 | Msa1241920:CDS |
| ATATCGATTCTCCATTTATA+TGG | 0.306337 | 8_2:-25810715 | None:intergenic |
| CCTGGAGTTGTTAATGGTTA+AGG | 0.320078 | 8_2:+25811669 | Msa1241920:CDS |
| AAGGCATCTGGCCAGAATTA+AGG | 0.330723 | 8_2:+25811888 | Msa1241920:CDS |
| CAGTAATTGGTGGTCGAAGT+TGG | 0.344047 | 8_2:-25811327 | None:intergenic |
| AGAACTTGATGCAGACGATA+TGG | 0.354104 | 8_2:-25811605 | None:intergenic |
| AGAAGCATAACTTGCTGAAT+AGG | 0.363229 | 8_2:-25812112 | None:intergenic |
| CCTCTTAATTTCAGCTTCAA+TGG | 0.367138 | 8_2:-25811977 | None:intergenic |
| CAATCTGGAATCTTAGTTCC+TGG | 0.371769 | 8_2:-25810683 | None:intergenic |
| ATCTACTTGCTGCAAACATT+GGG | 0.373620 | 8_2:+25812175 | Msa1241920:CDS |
| TGAATGACAGAAGGGTCATT+TGG | 0.384260 | 8_2:-25811466 | None:intergenic |
| TTCGCCTGTACTGTCACCTT+GGG | 0.385066 | 8_2:-25811772 | None:intergenic |
| AAGTTGGGTGGATGAGAGAA+TGG | 0.409510 | 8_2:-25811311 | None:intergenic |
| GGGTCATTTGGAATTGTAGT+AGG | 0.410198 | 8_2:-25811454 | None:intergenic |
| TCGATATCTTTCTGGTTTCA+AGG | 0.415262 | 8_2:+25810731 | Msa1241920:CDS |
| AGTTGGGTGGATGAGAGAAT+GGG | 0.428988 | 8_2:-25811310 | None:intergenic |
| TCTCTGTCTTGTTATTGGAC+AGG | 0.430182 | 8_2:+25810772 | Msa1241920:CDS |
| ATTCCAGTTATTGTTTGAAA+AGG | 0.432677 | 8_2:-25810957 | None:intergenic |
| TCATATTAAGAAGGGCGTTA+AGG | 0.437378 | 8_2:-25812324 | None:intergenic |
| ACAAGACAGAGACAAGTTAC+TGG | 0.439250 | 8_2:-25810761 | None:intergenic |
| ATTTGGAAGCCAATTTGGTT+GGG | 0.441708 | 8_2:-25811024 | None:intergenic |
| TGTGCTGAACCTCAAGAATC+AGG | 0.441908 | 8_2:+25812074 | Msa1241920:CDS |
| AACATGGTCAAAGGGATCAT+TGG | 0.445148 | 8_2:-25811551 | None:intergenic |
| TATTTGGAAGCCAATTTGGT+TGG | 0.449304 | 8_2:-25811025 | None:intergenic |
| CTTCGCCTGTACTGTCACCT+TGG | 0.451301 | 8_2:-25811773 | None:intergenic |
| CCTTAACCATTAACAACTCC+AGG | 0.452039 | 8_2:-25811669 | None:intergenic |
| ATATCGTCTGCATCAAGTTC+TGG | 0.454358 | 8_2:+25811607 | Msa1241920:CDS |
| GGAGGCTATTGTGGAGTTCA+AGG | 0.454672 | 8_2:+25811795 | Msa1241920:CDS |
| TACAACTATCTACTAAAGAA+AGG | 0.458264 | 8_2:+25812037 | Msa1241920:CDS |
| AAATTGGCTTCCAAATATAG+TGG | 0.469623 | 8_2:+25811031 | Msa1241920:CDS |
| CACTCTGGTGCTAAACTTCA+CGG | 0.472052 | 8_2:-25810813 | None:intergenic |
| GTGATTCCTCCTGATTCTTG+AGG | 0.472763 | 8_2:-25812083 | None:intergenic |
| CATAAACTTTCCAATTTCCA+AGG | 0.474836 | 8_2:-25810859 | None:intergenic |
| ATATGGTGTGTAAACCAATC+TGG | 0.475253 | 8_2:-25810698 | None:intergenic |
| CAACAAAGGAGTGGCGAGAC+AGG | 0.476311 | 8_2:+25811067 | Msa1241920:CDS |
| CCATTGAAGCTGAAATTAAG+AGG | 0.478487 | 8_2:+25811977 | Msa1241920:CDS |
| AGCACCAGAGTGTTCATCAA+TGG | 0.484418 | 8_2:+25810824 | Msa1241920:CDS |
| GGTTCAGCACAAGTTGTTCA+AGG | 0.485053 | 8_2:-25812062 | None:intergenic |
| CAGCTGAAATGAAGCAGACT+AGG | 0.485649 | 8_2:+25812217 | Msa1241920:CDS |
| GTCTGGACTTCATCAGCTGT+TGG | 0.485696 | 8_2:+25811726 | Msa1241920:CDS |
| AGAGGCAGACAAAAGAGATC+AGG | 0.487541 | 8_2:+25811135 | Msa1241920:CDS |
| TCTGATCCTAAAACACAGTC+TGG | 0.489301 | 8_2:+25811709 | Msa1241920:CDS |
| AGTAATTGGTGGTCGAAGTT+GGG | 0.494419 | 8_2:-25811326 | None:intergenic |
| CTGTCTTGTTATTGGACAGG+TGG | 0.495588 | 8_2:+25810775 | Msa1241920:CDS |
| CTGTGGCAGGCAAGGGTCGA+TGG | 0.504765 | 8_2:+25811917 | Msa1241920:CDS |
| GGAAGAGACTGTGGCAGGCA+AGG | 0.505951 | 8_2:+25811909 | Msa1241920:CDS |
| GAAGAGACTGTGGCAGGCAA+GGG | 0.508052 | 8_2:+25811910 | Msa1241920:CDS |
| TGTGTCTGTCAACAAACTAA+AGG | 0.509330 | 8_2:+25811858 | Msa1241920:CDS |
| ACAACTATCTACTAAAGAAA+GGG | 0.513624 | 8_2:+25812038 | Msa1241920:CDS |
| TAGAGAGGCTATCAATTCCC+TGG | 0.515169 | 8_2:+25811651 | Msa1241920:CDS |
| GATCTACTTGCTGCAAACAT+TGG | 0.515370 | 8_2:+25812174 | Msa1241920:CDS |
| CAGGAACTAAGATTCCAGAT+TGG | 0.517593 | 8_2:+25810684 | Msa1241920:CDS |
| CTTCTATCAACATGGTCAAA+GGG | 0.521393 | 8_2:-25811559 | None:intergenic |
| TGACAGGAATCAGTAGAAGC+TGG | 0.522844 | 8_2:+25810641 | Msa1241920:five_prime_UTR |
| TGCAGACGATATGGTTTCCT+CGG | 0.523603 | 8_2:-25811596 | None:intergenic |
| AGCTGAAATTAAGAGGAAGA+AGG | 0.528095 | 8_2:+25811984 | Msa1241920:CDS |
| TCTTCTATCAACATGGTCAA+AGG | 0.532251 | 8_2:-25811560 | None:intergenic |
| GTTGGGTGGATGAGAGAATG+GGG | 0.534946 | 8_2:-25811309 | None:intergenic |
| ACAGGCGAAGGAGGCTATTG+TGG | 0.536881 | 8_2:+25811786 | Msa1241920:CDS |
| CAATAACTGGAATGAAGTTG+TGG | 0.537687 | 8_2:+25810967 | Msa1241920:CDS |
| CCAATTACTGATGTGAGTAA+AGG | 0.542021 | 8_2:+25811340 | Msa1241920:CDS |
| TTCTAAGAGGCTTCAAGAGG+AGG | 0.544585 | 8_2:+25811423 | Msa1241920:CDS |
| GCTTCTCTCAATGAACAAGC+TGG | 0.551560 | 8_2:+25812129 | Msa1241920:CDS |
| CCACCCCAAGGTGACAGTAC+AGG | 0.558936 | 8_2:+25811768 | Msa1241920:CDS |
| TGACAGACACAGCAGCAGTT+CGG | 0.561036 | 8_2:-25811846 | None:intergenic |
| TGAAGTTGTGGTTTCATATG+CGG | 0.564978 | 8_2:+25810979 | Msa1241920:CDS |
| ATAAACTTTCCAATTTCCAA+GGG | 0.566041 | 8_2:-25810858 | None:intergenic |
| CAAGACAGAGACAAGTTACT+GGG | 0.566778 | 8_2:-25810760 | None:intergenic |
| CAACAACTTTGAATGACAGA+AGG | 0.570245 | 8_2:-25811475 | None:intergenic |
| GGCAGGCAAGGGTCGATGGA+AGG | 0.570426 | 8_2:+25811921 | Msa1241920:CDS |
| TGTCTTGTTATTGGACAGGT+GGG | 0.580004 | 8_2:+25810776 | Msa1241920:CDS |
| AGAACCTTCAGATTCAATGC+TGG | 0.582974 | 8_2:-25811524 | None:intergenic |
| TCACTGGAGAAACTTCTAAG+AGG | 0.583121 | 8_2:+25811410 | Msa1241920:CDS |
| ATTAAGGAAGAGACTGTGGC+AGG | 0.584328 | 8_2:+25811904 | Msa1241920:CDS |
| TTACTCACATCAGTAATTGG+TGG | 0.585433 | 8_2:-25811337 | None:intergenic |
| AACATTGGGGTAAAGCATGA+AGG | 0.590783 | 8_2:+25812189 | Msa1241920:CDS |
| TCTTCCAGCATTGAATCTGA+AGG | 0.591796 | 8_2:+25811520 | Msa1241920:CDS |
| TGTCATTCAAAGTTGTTGTG+AGG | 0.594516 | 8_2:+25811480 | Msa1241920:CDS |
| AGACTAGGCTCAAGTCGACC+TGG | 0.599083 | 8_2:+25812232 | Msa1241920:CDS |
| TATTGTGGAGTTCAAGGGAA+AGG | 0.604232 | 8_2:+25811801 | Msa1241920:CDS |
| GGTGACAGTACAGGCGAAGG+AGG | 0.607704 | 8_2:+25811777 | Msa1241920:CDS |
| AAGGATCTAGTTGTCATGAA+AGG | 0.608580 | 8_2:-25812305 | None:intergenic |
| ATTGCCATTGATGAACACTC+TGG | 0.612014 | 8_2:-25810828 | None:intergenic |
| TTCACTTGAAGCAATTAGAG+AGG | 0.613600 | 8_2:+25811636 | Msa1241920:CDS |
| GAGGCTATTGTGGAGTTCAA+GGG | 0.615946 | 8_2:+25811796 | Msa1241920:CDS |
| GTTGTTTAGGTCAATAGACC+AGG | 0.617644 | 8_2:-25812250 | None:intergenic |
| CCTGTACTGTCACCTTGGGG+TGG | 0.621260 | 8_2:-25811768 | None:intergenic |
| TACTGAGTCTTCTATCAACA+TGG | 0.630282 | 8_2:-25811567 | None:intergenic |
| AATTGGTGGTCGAAGTTGGG+TGG | 0.632764 | 8_2:-25811323 | None:intergenic |
| AACTTCTAAGAGGCTTCAAG+AGG | 0.634567 | 8_2:+25811420 | Msa1241920:CDS |
| CAGAATTAAGGAAGAGACTG+TGG | 0.644237 | 8_2:+25811900 | Msa1241920:CDS |
| AAGACTCAGTATTAGTGCCG+AGG | 0.646589 | 8_2:+25811579 | Msa1241920:CDS |
| AACAACTTTGAATGACAGAA+GGG | 0.646714 | 8_2:-25811474 | None:intergenic |
| GAGTGCAAGTAGCCACCCCA+AGG | 0.647726 | 8_2:+25811756 | Msa1241920:CDS |
| CATGTATCTCAACAAAGGAG+TGG | 0.652499 | 8_2:+25811058 | Msa1241920:CDS |
| GAATACATGTATCTCAACAA+AGG | 0.654555 | 8_2:+25811053 | Msa1241920:CDS |
| CAAGGTGACAGTACAGGCGA+AGG | 0.656696 | 8_2:+25811774 | Msa1241920:CDS |
| TTGGGTGGATGAGAGAATGG+GGG | 0.662577 | 8_2:-25811308 | None:intergenic |
| TCGCCTGTACTGTCACCTTG+GGG | 0.667336 | 8_2:-25811771 | None:intergenic |
| CTTAACCATTAACAACTCCA+GGG | 0.668065 | 8_2:-25811668 | None:intergenic |
| TCTACTTGCTGCAAACATTG+GGG | 0.671247 | 8_2:+25812176 | Msa1241920:CDS |
| GCAAAGTGTGAATTCAACAG+AGG | 0.712401 | 8_2:+25811117 | Msa1241920:CDS |
| GCTGAACCTCAAGAATCAGG+AGG | 0.712814 | 8_2:+25812077 | Msa1241920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAACAAAAACAAAACA+AGG | - | chr8_2:25811232-25811251 | None:intergenic | 15.0% |
| !!! | TAATGTTACTTTTAATCATA+TGG | - | chr8_2:25812281-25812300 | None:intergenic | 15.0% |
| !! | AAATAAACAAAAACAAAACA+AGG | - | chr8_2:25811232-25811251 | None:intergenic | 15.0% |
| !!! | TAATGTTACTTTTAATCATA+TGG | - | chr8_2:25812281-25812300 | None:intergenic | 15.0% |
| !!! | ACATACTTTTGTTTGATATA+GGG | + | chr8_2:25810903-25810922 | Msa1241920:CDS | 20.0% |
| !!! | ACATACTTTTGTTTGATATA+GGG | + | chr8_2:25810903-25810922 | Msa1241920:CDS | 20.0% |
| !!! | ATATCGATTCTCCATTTATA+TGG | - | chr8_2:25810718-25810737 | None:intergenic | 25.0% |
| ! | ATAAACTTTCCAATTTCCAA+GGG | - | chr8_2:25810861-25810880 | None:intergenic | 25.0% |
| !!! | CACATACTTTTGTTTGATAT+AGG | + | chr8_2:25810902-25810921 | Msa1241920:CDS | 25.0% |
| ! | ATTCCAGTTATTGTTTGAAA+AGG | - | chr8_2:25810960-25810979 | None:intergenic | 25.0% |
| !!! | CGGTTCATTTTAACAAAAAT+GGG | + | chr8_2:25810999-25811018 | Msa1241920:CDS | 25.0% |
| ! | TACATGTATTCCACTATATT+TGG | - | chr8_2:25811044-25811063 | None:intergenic | 25.0% |
| ! | TAAACAAAAACAAAACAAGG+AGG | - | chr8_2:25811229-25811248 | None:intergenic | 25.0% |
| ! | GAATTCTTGGAATGATAAAA+AGG | - | chr8_2:25811827-25811846 | None:intergenic | 25.0% |
| !! | ACAAACTAAAGGATTTTGAA+AGG | + | chr8_2:25811869-25811888 | Msa1241920:CDS | 25.0% |
| !!! | CCTTTTTAATTGAGTTTTTG+AGG | - | chr8_2:25811948-25811967 | None:intergenic | 25.0% |
| ! | CCTCAAAAACTCAATTAAAA+AGG | + | chr8_2:25811945-25811964 | Msa1241920:CDS | 25.0% |
| ! | CTCAATTAAAAAGGTTTCTT+TGG | + | chr8_2:25811954-25811973 | Msa1241920:CDS | 25.0% |
| ! | TACAACTATCTACTAAAGAA+AGG | + | chr8_2:25812037-25812056 | Msa1241920:CDS | 25.0% |
| ! | ACAACTATCTACTAAAGAAA+GGG | + | chr8_2:25812038-25812057 | Msa1241920:CDS | 25.0% |
| !! | TACTTTTAATCATATGGAAC+TGG | - | chr8_2:25812275-25812294 | None:intergenic | 25.0% |
| !!! | ATATCGATTCTCCATTTATA+TGG | - | chr8_2:25810718-25810737 | None:intergenic | 25.0% |
| ! | ATAAACTTTCCAATTTCCAA+GGG | - | chr8_2:25810861-25810880 | None:intergenic | 25.0% |
| !!! | CACATACTTTTGTTTGATAT+AGG | + | chr8_2:25810902-25810921 | Msa1241920:CDS | 25.0% |
| ! | ATTCCAGTTATTGTTTGAAA+AGG | - | chr8_2:25810960-25810979 | None:intergenic | 25.0% |
| !!! | CGGTTCATTTTAACAAAAAT+GGG | + | chr8_2:25810999-25811018 | Msa1241920:CDS | 25.0% |
| ! | TACATGTATTCCACTATATT+TGG | - | chr8_2:25811044-25811063 | None:intergenic | 25.0% |
| ! | TAAACAAAAACAAAACAAGG+AGG | - | chr8_2:25811229-25811248 | None:intergenic | 25.0% |
| ! | GAATTCTTGGAATGATAAAA+AGG | - | chr8_2:25811827-25811846 | None:intergenic | 25.0% |
| !! | ACAAACTAAAGGATTTTGAA+AGG | + | chr8_2:25811869-25811888 | Msa1241920:CDS | 25.0% |
| !!! | CCTTTTTAATTGAGTTTTTG+AGG | - | chr8_2:25811948-25811967 | None:intergenic | 25.0% |
| ! | CCTCAAAAACTCAATTAAAA+AGG | + | chr8_2:25811945-25811964 | Msa1241920:CDS | 25.0% |
| ! | CTCAATTAAAAAGGTTTCTT+TGG | + | chr8_2:25811954-25811973 | Msa1241920:CDS | 25.0% |
| ! | TACAACTATCTACTAAAGAA+AGG | + | chr8_2:25812037-25812056 | Msa1241920:CDS | 25.0% |
| ! | ACAACTATCTACTAAAGAAA+GGG | + | chr8_2:25812038-25812057 | Msa1241920:CDS | 25.0% |
| !! | TACTTTTAATCATATGGAAC+TGG | - | chr8_2:25812275-25812294 | None:intergenic | 25.0% |
| TGGTTTACACACCATATAAA+TGG | + | chr8_2:25810704-25810723 | Msa1241920:CDS | 30.0% | |
| ATAAAAAGTCCCTTGGAAAT+TGG | + | chr8_2:25810849-25810868 | Msa1241920:CDS | 30.0% | |
| CATAAACTTTCCAATTTCCA+AGG | - | chr8_2:25810862-25810881 | None:intergenic | 30.0% | |
| ! | TAGCCTTTTCAAACAATAAC+TGG | + | chr8_2:25810954-25810973 | Msa1241920:CDS | 30.0% |
| !! | GCGGTTCATTTTAACAAAAA+TGG | + | chr8_2:25810998-25811017 | Msa1241920:CDS | 30.0% |
| ACTATATTTGGAAGCCAATT+TGG | - | chr8_2:25811032-25811051 | None:intergenic | 30.0% | |
| ! | AAATTGGCTTCCAAATATAG+TGG | + | chr8_2:25811031-25811050 | Msa1241920:CDS | 30.0% |
| GAATACATGTATCTCAACAA+AGG | + | chr8_2:25811053-25811072 | Msa1241920:CDS | 30.0% | |
| ! | AAGAATTTGGTTCGATGAAT+TGG | - | chr8_2:25811096-25811115 | None:intergenic | 30.0% |
| AAAACAAGGAGGAAAAATAC+TGG | - | chr8_2:25811218-25811237 | None:intergenic | 30.0% | |
| ! | TAGCTGGAACTATTAGTTTA+GGG | - | chr8_2:25811372-25811391 | None:intergenic | 30.0% |
| ! | TTAGCTGGAACTATTAGTTT+AGG | - | chr8_2:25811373-25811392 | None:intergenic | 30.0% |
| AACAACTTTGAATGACAGAA+GGG | - | chr8_2:25811477-25811496 | None:intergenic | 30.0% | |
| TGGTTTACACACCATATAAA+TGG | + | chr8_2:25810704-25810723 | Msa1241920:CDS | 30.0% | |
| ATAAAAAGTCCCTTGGAAAT+TGG | + | chr8_2:25810849-25810868 | Msa1241920:CDS | 30.0% | |
| CATAAACTTTCCAATTTCCA+AGG | - | chr8_2:25810862-25810881 | None:intergenic | 30.0% | |
| ! | TAGCCTTTTCAAACAATAAC+TGG | + | chr8_2:25810954-25810973 | Msa1241920:CDS | 30.0% |
| !! | GCGGTTCATTTTAACAAAAA+TGG | + | chr8_2:25810998-25811017 | Msa1241920:CDS | 30.0% |
| ACTATATTTGGAAGCCAATT+TGG | - | chr8_2:25811032-25811051 | None:intergenic | 30.0% | |
| ! | AAATTGGCTTCCAAATATAG+TGG | + | chr8_2:25811031-25811050 | Msa1241920:CDS | 30.0% |
| GAATACATGTATCTCAACAA+AGG | + | chr8_2:25811053-25811072 | Msa1241920:CDS | 30.0% | |
| ! | AAGAATTTGGTTCGATGAAT+TGG | - | chr8_2:25811096-25811115 | None:intergenic | 30.0% |
| AAAACAAGGAGGAAAAATAC+TGG | - | chr8_2:25811218-25811237 | None:intergenic | 30.0% | |
| ! | TAGCTGGAACTATTAGTTTA+GGG | - | chr8_2:25811372-25811391 | None:intergenic | 30.0% |
| ! | TTAGCTGGAACTATTAGTTT+AGG | - | chr8_2:25811373-25811392 | None:intergenic | 30.0% |
| AACAACTTTGAATGACAGAA+GGG | - | chr8_2:25811477-25811496 | None:intergenic | 30.0% | |
| !! | AACAAGATGTTTGCTTTTCC+AGG | + | chr8_2:25810665-25810684 | Msa1241920:exon | 35.0% |
| ATATGGTGTGTAAACCAATC+TGG | - | chr8_2:25810701-25810720 | None:intergenic | 35.0% | |
| ATGGAGAATCGATATCTTTC+TGG | + | chr8_2:25810723-25810742 | Msa1241920:CDS | 35.0% | |
| !! | TCGATATCTTTCTGGTTTCA+AGG | + | chr8_2:25810731-25810750 | Msa1241920:CDS | 35.0% |
| ! | ACTTGTCTCTGTCTTGTTAT+TGG | + | chr8_2:25810767-25810786 | Msa1241920:CDS | 35.0% |
| AATGGCAATAAAAAGTCCCT+TGG | + | chr8_2:25810842-25810861 | Msa1241920:CDS | 35.0% | |
| CAATAACTGGAATGAAGTTG+TGG | + | chr8_2:25810967-25810986 | Msa1241920:CDS | 35.0% | |
| TGAAGTTGTGGTTTCATATG+CGG | + | chr8_2:25810979-25810998 | Msa1241920:CDS | 35.0% | |
| ATTTGGAAGCCAATTTGGTT+GGG | - | chr8_2:25811027-25811046 | None:intergenic | 35.0% | |
| TATTTGGAAGCCAATTTGGT+TGG | - | chr8_2:25811028-25811047 | None:intergenic | 35.0% | |
| TTCACACTTTGCGAAGAATT+TGG | - | chr8_2:25811109-25811128 | None:intergenic | 35.0% | |
| ! | ACCTTTGTCTGATCTTTTTG+CGG | - | chr8_2:25811280-25811299 | None:intergenic | 35.0% |
| TTACTCACATCAGTAATTGG+TGG | - | chr8_2:25811340-25811359 | None:intergenic | 35.0% | |
| CCTTTACTCACATCAGTAAT+TGG | - | chr8_2:25811343-25811362 | None:intergenic | 35.0% | |
| CCAATTACTGATGTGAGTAA+AGG | + | chr8_2:25811340-25811359 | Msa1241920:CDS | 35.0% | |
| CAACAACTTTGAATGACAGA+AGG | - | chr8_2:25811478-25811497 | None:intergenic | 35.0% | |
| TGTCATTCAAAGTTGTTGTG+AGG | + | chr8_2:25811480-25811499 | Msa1241920:CDS | 35.0% | |
| CTTCTATCAACATGGTCAAA+GGG | - | chr8_2:25811562-25811581 | None:intergenic | 35.0% | |
| TCTTCTATCAACATGGTCAA+AGG | - | chr8_2:25811563-25811582 | None:intergenic | 35.0% | |
| TACTGAGTCTTCTATCAACA+TGG | - | chr8_2:25811570-25811589 | None:intergenic | 35.0% | |
| TTCACTTGAAGCAATTAGAG+AGG | + | chr8_2:25811636-25811655 | Msa1241920:CDS | 35.0% | |
| CTTAACCATTAACAACTCCA+GGG | - | chr8_2:25811671-25811690 | None:intergenic | 35.0% | |
| TGTGTCTGTCAACAAACTAA+AGG | + | chr8_2:25811858-25811877 | Msa1241920:CDS | 35.0% | |
| !!! | AAAGGATTTTGAAAGGCATC+TGG | + | chr8_2:25811876-25811895 | Msa1241920:CDS | 35.0% |
| CCTCTTAATTTCAGCTTCAA+TGG | - | chr8_2:25811980-25811999 | None:intergenic | 35.0% | |
| CCATTGAAGCTGAAATTAAG+AGG | + | chr8_2:25811977-25811996 | Msa1241920:CDS | 35.0% | |
| AGCTGAAATTAAGAGGAAGA+AGG | + | chr8_2:25811984-25812003 | Msa1241920:CDS | 35.0% | |
| !! | AGAAGCATAACTTGCTGAAT+AGG | - | chr8_2:25812115-25812134 | None:intergenic | 35.0% |
| ! | ATCTACTTGCTGCAAACATT+GGG | + | chr8_2:25812175-25812194 | Msa1241920:CDS | 35.0% |
| TCATATGGAACTGGTTGTTT+AGG | - | chr8_2:25812266-25812285 | None:intergenic | 35.0% | |
| AAGGATCTAGTTGTCATGAA+AGG | - | chr8_2:25812308-25812327 | None:intergenic | 35.0% | |
| !! | AACAAGATGTTTGCTTTTCC+AGG | + | chr8_2:25810665-25810684 | Msa1241920:exon | 35.0% |
| ATATGGTGTGTAAACCAATC+TGG | - | chr8_2:25810701-25810720 | None:intergenic | 35.0% | |
| ATGGAGAATCGATATCTTTC+TGG | + | chr8_2:25810723-25810742 | Msa1241920:CDS | 35.0% | |
| !! | TCGATATCTTTCTGGTTTCA+AGG | + | chr8_2:25810731-25810750 | Msa1241920:CDS | 35.0% |
| ! | ACTTGTCTCTGTCTTGTTAT+TGG | + | chr8_2:25810767-25810786 | Msa1241920:CDS | 35.0% |
| AATGGCAATAAAAAGTCCCT+TGG | + | chr8_2:25810842-25810861 | Msa1241920:CDS | 35.0% | |
| CAATAACTGGAATGAAGTTG+TGG | + | chr8_2:25810967-25810986 | Msa1241920:CDS | 35.0% | |
| TGAAGTTGTGGTTTCATATG+CGG | + | chr8_2:25810979-25810998 | Msa1241920:CDS | 35.0% | |
| ATTTGGAAGCCAATTTGGTT+GGG | - | chr8_2:25811027-25811046 | None:intergenic | 35.0% | |
| TATTTGGAAGCCAATTTGGT+TGG | - | chr8_2:25811028-25811047 | None:intergenic | 35.0% | |
| TTCACACTTTGCGAAGAATT+TGG | - | chr8_2:25811109-25811128 | None:intergenic | 35.0% | |
| ! | ACCTTTGTCTGATCTTTTTG+CGG | - | chr8_2:25811280-25811299 | None:intergenic | 35.0% |
| TTACTCACATCAGTAATTGG+TGG | - | chr8_2:25811340-25811359 | None:intergenic | 35.0% | |
| CCTTTACTCACATCAGTAAT+TGG | - | chr8_2:25811343-25811362 | None:intergenic | 35.0% | |
| CCAATTACTGATGTGAGTAA+AGG | + | chr8_2:25811340-25811359 | Msa1241920:CDS | 35.0% | |
| CAACAACTTTGAATGACAGA+AGG | - | chr8_2:25811478-25811497 | None:intergenic | 35.0% | |
| TGTCATTCAAAGTTGTTGTG+AGG | + | chr8_2:25811480-25811499 | Msa1241920:CDS | 35.0% | |
| CTTCTATCAACATGGTCAAA+GGG | - | chr8_2:25811562-25811581 | None:intergenic | 35.0% | |
| TCTTCTATCAACATGGTCAA+AGG | - | chr8_2:25811563-25811582 | None:intergenic | 35.0% | |
| TACTGAGTCTTCTATCAACA+TGG | - | chr8_2:25811570-25811589 | None:intergenic | 35.0% | |
| TTCACTTGAAGCAATTAGAG+AGG | + | chr8_2:25811636-25811655 | Msa1241920:CDS | 35.0% | |
| CTTAACCATTAACAACTCCA+GGG | - | chr8_2:25811671-25811690 | None:intergenic | 35.0% | |
| TGTGTCTGTCAACAAACTAA+AGG | + | chr8_2:25811858-25811877 | Msa1241920:CDS | 35.0% | |
| !!! | AAAGGATTTTGAAAGGCATC+TGG | + | chr8_2:25811876-25811895 | Msa1241920:CDS | 35.0% |
| CCTCTTAATTTCAGCTTCAA+TGG | - | chr8_2:25811980-25811999 | None:intergenic | 35.0% | |
| CCATTGAAGCTGAAATTAAG+AGG | + | chr8_2:25811977-25811996 | Msa1241920:CDS | 35.0% | |
| AGCTGAAATTAAGAGGAAGA+AGG | + | chr8_2:25811984-25812003 | Msa1241920:CDS | 35.0% | |
| !! | AGAAGCATAACTTGCTGAAT+AGG | - | chr8_2:25812115-25812134 | None:intergenic | 35.0% |
| ! | ATCTACTTGCTGCAAACATT+GGG | + | chr8_2:25812175-25812194 | Msa1241920:CDS | 35.0% |
| TCATATGGAACTGGTTGTTT+AGG | - | chr8_2:25812266-25812285 | None:intergenic | 35.0% | |
| AAGGATCTAGTTGTCATGAA+AGG | - | chr8_2:25812308-25812327 | None:intergenic | 35.0% | |
| ! | CAATCTGGAATCTTAGTTCC+TGG | - | chr8_2:25810686-25810705 | None:intergenic | 40.0% |
| CAGGAACTAAGATTCCAGAT+TGG | + | chr8_2:25810684-25810703 | Msa1241920:CDS | 40.0% | |
| CAAGACAGAGACAAGTTACT+GGG | - | chr8_2:25810763-25810782 | None:intergenic | 40.0% | |
| ACAAGACAGAGACAAGTTAC+TGG | - | chr8_2:25810764-25810783 | None:intergenic | 40.0% | |
| !! | TCTCTGTCTTGTTATTGGAC+AGG | + | chr8_2:25810772-25810791 | Msa1241920:CDS | 40.0% |
| !! | TGTCTTGTTATTGGACAGGT+GGG | + | chr8_2:25810776-25810795 | Msa1241920:CDS | 40.0% |
| ATTGCCATTGATGAACACTC+TGG | - | chr8_2:25810831-25810850 | None:intergenic | 40.0% | |
| ! | AAATGGGTTCCCAACCAAAT+TGG | + | chr8_2:25811015-25811034 | Msa1241920:CDS | 40.0% |
| CATGTATCTCAACAAAGGAG+TGG | + | chr8_2:25811058-25811077 | Msa1241920:CDS | 40.0% | |
| GCAAAGTGTGAATTCAACAG+AGG | + | chr8_2:25811117-25811136 | Msa1241920:CDS | 40.0% | |
| ! | AAATACTGGTTGAGCGACAT+AGG | - | chr8_2:25811204-25811223 | None:intergenic | 40.0% |
| ACCGCAAAAAGATCAGACAA+AGG | + | chr8_2:25811276-25811295 | Msa1241920:CDS | 40.0% | |
| ! | AGTAATTGGTGGTCGAAGTT+GGG | - | chr8_2:25811329-25811348 | None:intergenic | 40.0% |
| ! | AGTTCCAGCTAAGAGCTTTT+TGG | + | chr8_2:25811381-25811400 | Msa1241920:CDS | 40.0% |
| TCATCCAAAAAGCTCTTAGC+TGG | - | chr8_2:25811388-25811407 | None:intergenic | 40.0% | |
| ! | AGCTTTTTGGATGATGTCAC+TGG | + | chr8_2:25811394-25811413 | Msa1241920:CDS | 40.0% |
| TCACTGGAGAAACTTCTAAG+AGG | + | chr8_2:25811410-25811429 | Msa1241920:CDS | 40.0% | |
| ! | AACTTCTAAGAGGCTTCAAG+AGG | + | chr8_2:25811420-25811439 | Msa1241920:CDS | 40.0% |
| ! | GGGTCATTTGGAATTGTAGT+AGG | - | chr8_2:25811457-25811476 | None:intergenic | 40.0% |
| TGAATGACAGAAGGGTCATT+TGG | - | chr8_2:25811469-25811488 | None:intergenic | 40.0% | |
| ! | TCTTCCAGCATTGAATCTGA+AGG | + | chr8_2:25811520-25811539 | Msa1241920:CDS | 40.0% |
| AGAACCTTCAGATTCAATGC+TGG | - | chr8_2:25811527-25811546 | None:intergenic | 40.0% | |
| AACATGGTCAAAGGGATCAT+TGG | - | chr8_2:25811554-25811573 | None:intergenic | 40.0% | |
| AGAACTTGATGCAGACGATA+TGG | - | chr8_2:25811608-25811627 | None:intergenic | 40.0% | |
| ATATCGTCTGCATCAAGTTC+TGG | + | chr8_2:25811607-25811626 | Msa1241920:CDS | 40.0% | |
| CAATTCCCTGGAGTTGTTAA+TGG | + | chr8_2:25811663-25811682 | Msa1241920:CDS | 40.0% | |
| CCTTAACCATTAACAACTCC+AGG | - | chr8_2:25811672-25811691 | None:intergenic | 40.0% | |
| CCTGGAGTTGTTAATGGTTA+AGG | + | chr8_2:25811669-25811688 | Msa1241920:CDS | 40.0% | |
| TCTGATCCTAAAACACAGTC+TGG | + | chr8_2:25811709-25811728 | Msa1241920:CDS | 40.0% | |
| ! | TGAAGTCCAGACTGTGTTTT+AGG | - | chr8_2:25811718-25811737 | None:intergenic | 40.0% |
| TATTGTGGAGTTCAAGGGAA+AGG | + | chr8_2:25811801-25811820 | Msa1241920:CDS | 40.0% | |
| CACAGTCTCTTCCTTAATTC+TGG | - | chr8_2:25811902-25811921 | None:intergenic | 40.0% | |
| CAGAATTAAGGAAGAGACTG+TGG | + | chr8_2:25811900-25811919 | Msa1241920:CDS | 40.0% | |
| ! | GATCTACTTGCTGCAAACAT+TGG | + | chr8_2:25812174-25812193 | Msa1241920:CDS | 40.0% |
| ! | TCTACTTGCTGCAAACATTG+GGG | + | chr8_2:25812176-25812195 | Msa1241920:CDS | 40.0% |
| AACATTGGGGTAAAGCATGA+AGG | + | chr8_2:25812189-25812208 | Msa1241920:CDS | 40.0% | |
| GTTGTTTAGGTCAATAGACC+AGG | - | chr8_2:25812253-25812272 | None:intergenic | 40.0% | |
| ! | CAATCTGGAATCTTAGTTCC+TGG | - | chr8_2:25810686-25810705 | None:intergenic | 40.0% |
| CAGGAACTAAGATTCCAGAT+TGG | + | chr8_2:25810684-25810703 | Msa1241920:CDS | 40.0% | |
| CAAGACAGAGACAAGTTACT+GGG | - | chr8_2:25810763-25810782 | None:intergenic | 40.0% | |
| ACAAGACAGAGACAAGTTAC+TGG | - | chr8_2:25810764-25810783 | None:intergenic | 40.0% | |
| !! | TCTCTGTCTTGTTATTGGAC+AGG | + | chr8_2:25810772-25810791 | Msa1241920:CDS | 40.0% |
| !! | TGTCTTGTTATTGGACAGGT+GGG | + | chr8_2:25810776-25810795 | Msa1241920:CDS | 40.0% |
| ATTGCCATTGATGAACACTC+TGG | - | chr8_2:25810831-25810850 | None:intergenic | 40.0% | |
| ! | AAATGGGTTCCCAACCAAAT+TGG | + | chr8_2:25811015-25811034 | Msa1241920:CDS | 40.0% |
| CATGTATCTCAACAAAGGAG+TGG | + | chr8_2:25811058-25811077 | Msa1241920:CDS | 40.0% | |
| GCAAAGTGTGAATTCAACAG+AGG | + | chr8_2:25811117-25811136 | Msa1241920:CDS | 40.0% | |
| ! | AAATACTGGTTGAGCGACAT+AGG | - | chr8_2:25811204-25811223 | None:intergenic | 40.0% |
| ACCGCAAAAAGATCAGACAA+AGG | + | chr8_2:25811276-25811295 | Msa1241920:CDS | 40.0% | |
| ! | AGTAATTGGTGGTCGAAGTT+GGG | - | chr8_2:25811329-25811348 | None:intergenic | 40.0% |
| ! | AGTTCCAGCTAAGAGCTTTT+TGG | + | chr8_2:25811381-25811400 | Msa1241920:CDS | 40.0% |
| TCATCCAAAAAGCTCTTAGC+TGG | - | chr8_2:25811388-25811407 | None:intergenic | 40.0% | |
| ! | AGCTTTTTGGATGATGTCAC+TGG | + | chr8_2:25811394-25811413 | Msa1241920:CDS | 40.0% |
| TCACTGGAGAAACTTCTAAG+AGG | + | chr8_2:25811410-25811429 | Msa1241920:CDS | 40.0% | |
| ! | AACTTCTAAGAGGCTTCAAG+AGG | + | chr8_2:25811420-25811439 | Msa1241920:CDS | 40.0% |
| ! | GGGTCATTTGGAATTGTAGT+AGG | - | chr8_2:25811457-25811476 | None:intergenic | 40.0% |
| TGAATGACAGAAGGGTCATT+TGG | - | chr8_2:25811469-25811488 | None:intergenic | 40.0% | |
| ! | TCTTCCAGCATTGAATCTGA+AGG | + | chr8_2:25811520-25811539 | Msa1241920:CDS | 40.0% |
| AGAACCTTCAGATTCAATGC+TGG | - | chr8_2:25811527-25811546 | None:intergenic | 40.0% | |
| AACATGGTCAAAGGGATCAT+TGG | - | chr8_2:25811554-25811573 | None:intergenic | 40.0% | |
| AGAACTTGATGCAGACGATA+TGG | - | chr8_2:25811608-25811627 | None:intergenic | 40.0% | |
| ATATCGTCTGCATCAAGTTC+TGG | + | chr8_2:25811607-25811626 | Msa1241920:CDS | 40.0% | |
| CAATTCCCTGGAGTTGTTAA+TGG | + | chr8_2:25811663-25811682 | Msa1241920:CDS | 40.0% | |
| CCTTAACCATTAACAACTCC+AGG | - | chr8_2:25811672-25811691 | None:intergenic | 40.0% | |
| CCTGGAGTTGTTAATGGTTA+AGG | + | chr8_2:25811669-25811688 | Msa1241920:CDS | 40.0% | |
| TCTGATCCTAAAACACAGTC+TGG | + | chr8_2:25811709-25811728 | Msa1241920:CDS | 40.0% | |
| ! | TGAAGTCCAGACTGTGTTTT+AGG | - | chr8_2:25811718-25811737 | None:intergenic | 40.0% |
| TATTGTGGAGTTCAAGGGAA+AGG | + | chr8_2:25811801-25811820 | Msa1241920:CDS | 40.0% | |
| CACAGTCTCTTCCTTAATTC+TGG | - | chr8_2:25811902-25811921 | None:intergenic | 40.0% | |
| CAGAATTAAGGAAGAGACTG+TGG | + | chr8_2:25811900-25811919 | Msa1241920:CDS | 40.0% | |
| ! | GATCTACTTGCTGCAAACAT+TGG | + | chr8_2:25812174-25812193 | Msa1241920:CDS | 40.0% |
| ! | TCTACTTGCTGCAAACATTG+GGG | + | chr8_2:25812176-25812195 | Msa1241920:CDS | 40.0% |
| AACATTGGGGTAAAGCATGA+AGG | + | chr8_2:25812189-25812208 | Msa1241920:CDS | 40.0% | |
| GTTGTTTAGGTCAATAGACC+AGG | - | chr8_2:25812253-25812272 | None:intergenic | 40.0% | |
| TGACAGGAATCAGTAGAAGC+TGG | + | chr8_2:25810641-25810660 | Msa1241920:five_prime_UTR | 45.0% | |
| !! | CTGTCTTGTTATTGGACAGG+TGG | + | chr8_2:25810775-25810794 | Msa1241920:CDS | 45.0% |
| ! | CACTCTGGTGCTAAACTTCA+CGG | - | chr8_2:25810816-25810835 | None:intergenic | 45.0% |
| ! | AGCACCAGAGTGTTCATCAA+TGG | + | chr8_2:25810824-25810843 | Msa1241920:CDS | 45.0% |
| AGAGGCAGACAAAAGAGATC+AGG | + | chr8_2:25811135-25811154 | Msa1241920:CDS | 45.0% | |
| TGGTTGAGCGACATAGGAAT+GGG | - | chr8_2:25811198-25811217 | None:intergenic | 45.0% | |
| AGTTGGGTGGATGAGAGAAT+GGG | - | chr8_2:25811313-25811332 | None:intergenic | 45.0% | |
| AAGTTGGGTGGATGAGAGAA+TGG | - | chr8_2:25811314-25811333 | None:intergenic | 45.0% | |
| ! | CAGTAATTGGTGGTCGAAGT+TGG | - | chr8_2:25811330-25811349 | None:intergenic | 45.0% |
| ! | TTCTAAGAGGCTTCAAGAGG+AGG | + | chr8_2:25811423-25811442 | Msa1241920:CDS | 45.0% |
| AAGACTCAGTATTAGTGCCG+AGG | + | chr8_2:25811579-25811598 | Msa1241920:CDS | 45.0% | |
| TGCAGACGATATGGTTTCCT+CGG | - | chr8_2:25811599-25811618 | None:intergenic | 45.0% | |
| TAGAGAGGCTATCAATTCCC+TGG | + | chr8_2:25811651-25811670 | Msa1241920:CDS | 45.0% | |
| GAGGCTATTGTGGAGTTCAA+GGG | + | chr8_2:25811796-25811815 | Msa1241920:CDS | 45.0% | |
| ! | AAGGCATCTGGCCAGAATTA+AGG | + | chr8_2:25811888-25811907 | Msa1241920:CDS | 45.0% |
| ATTAAGGAAGAGACTGTGGC+AGG | + | chr8_2:25811904-25811923 | Msa1241920:CDS | 45.0% | |
| GGTTCAGCACAAGTTGTTCA+AGG | - | chr8_2:25812065-25812084 | None:intergenic | 45.0% | |
| TGTGCTGAACCTCAAGAATC+AGG | + | chr8_2:25812074-25812093 | Msa1241920:CDS | 45.0% | |
| GTGATTCCTCCTGATTCTTG+AGG | - | chr8_2:25812086-25812105 | None:intergenic | 45.0% | |
| GCTTCTCTCAATGAACAAGC+TGG | + | chr8_2:25812129-25812148 | Msa1241920:CDS | 45.0% | |
| CAGCTGAAATGAAGCAGACT+AGG | + | chr8_2:25812217-25812236 | Msa1241920:CDS | 45.0% | |
| TGACAGGAATCAGTAGAAGC+TGG | + | chr8_2:25810641-25810660 | Msa1241920:five_prime_UTR | 45.0% | |
| !! | CTGTCTTGTTATTGGACAGG+TGG | + | chr8_2:25810775-25810794 | Msa1241920:CDS | 45.0% |
| ! | CACTCTGGTGCTAAACTTCA+CGG | - | chr8_2:25810816-25810835 | None:intergenic | 45.0% |
| ! | AGCACCAGAGTGTTCATCAA+TGG | + | chr8_2:25810824-25810843 | Msa1241920:CDS | 45.0% |
| AGAGGCAGACAAAAGAGATC+AGG | + | chr8_2:25811135-25811154 | Msa1241920:CDS | 45.0% | |
| TGGTTGAGCGACATAGGAAT+GGG | - | chr8_2:25811198-25811217 | None:intergenic | 45.0% | |
| AGTTGGGTGGATGAGAGAAT+GGG | - | chr8_2:25811313-25811332 | None:intergenic | 45.0% | |
| AAGTTGGGTGGATGAGAGAA+TGG | - | chr8_2:25811314-25811333 | None:intergenic | 45.0% | |
| ! | CAGTAATTGGTGGTCGAAGT+TGG | - | chr8_2:25811330-25811349 | None:intergenic | 45.0% |
| ! | TTCTAAGAGGCTTCAAGAGG+AGG | + | chr8_2:25811423-25811442 | Msa1241920:CDS | 45.0% |
| AAGACTCAGTATTAGTGCCG+AGG | + | chr8_2:25811579-25811598 | Msa1241920:CDS | 45.0% | |
| TGCAGACGATATGGTTTCCT+CGG | - | chr8_2:25811599-25811618 | None:intergenic | 45.0% | |
| TAGAGAGGCTATCAATTCCC+TGG | + | chr8_2:25811651-25811670 | Msa1241920:CDS | 45.0% | |
| GAGGCTATTGTGGAGTTCAA+GGG | + | chr8_2:25811796-25811815 | Msa1241920:CDS | 45.0% | |
| ! | AAGGCATCTGGCCAGAATTA+AGG | + | chr8_2:25811888-25811907 | Msa1241920:CDS | 45.0% |
| ATTAAGGAAGAGACTGTGGC+AGG | + | chr8_2:25811904-25811923 | Msa1241920:CDS | 45.0% | |
| GGTTCAGCACAAGTTGTTCA+AGG | - | chr8_2:25812065-25812084 | None:intergenic | 45.0% | |
| TGTGCTGAACCTCAAGAATC+AGG | + | chr8_2:25812074-25812093 | Msa1241920:CDS | 45.0% | |
| GTGATTCCTCCTGATTCTTG+AGG | - | chr8_2:25812086-25812105 | None:intergenic | 45.0% | |
| GCTTCTCTCAATGAACAAGC+TGG | + | chr8_2:25812129-25812148 | Msa1241920:CDS | 45.0% | |
| CAGCTGAAATGAAGCAGACT+AGG | + | chr8_2:25812217-25812236 | Msa1241920:CDS | 45.0% | |
| GCGACATAGGAATGGGGTAA+AGG | - | chr8_2:25811191-25811210 | None:intergenic | 50.0% | |
| GGTTGAGCGACATAGGAATG+GGG | - | chr8_2:25811197-25811216 | None:intergenic | 50.0% | |
| CTGGTTGAGCGACATAGGAA+TGG | - | chr8_2:25811199-25811218 | None:intergenic | 50.0% | |
| TTGGGTGGATGAGAGAATGG+GGG | - | chr8_2:25811311-25811330 | None:intergenic | 50.0% | |
| GTTGGGTGGATGAGAGAATG+GGG | - | chr8_2:25811312-25811331 | None:intergenic | 50.0% | |
| ! | AATTGGTGGTCGAAGTTGGG+TGG | - | chr8_2:25811326-25811345 | None:intergenic | 50.0% |
| GTCTGGACTTCATCAGCTGT+TGG | + | chr8_2:25811726-25811745 | Msa1241920:CDS | 50.0% | |
| TTCGCCTGTACTGTCACCTT+GGG | - | chr8_2:25811775-25811794 | None:intergenic | 50.0% | |
| GGAGGCTATTGTGGAGTTCA+AGG | + | chr8_2:25811795-25811814 | Msa1241920:CDS | 50.0% | |
| CAGCAGCAGTTCGGAATTCT+TGG | - | chr8_2:25811840-25811859 | None:intergenic | 50.0% | |
| TGACAGACACAGCAGCAGTT+CGG | - | chr8_2:25811849-25811868 | None:intergenic | 50.0% | |
| GCTGAACCTCAAGAATCAGG+AGG | + | chr8_2:25812077-25812096 | Msa1241920:CDS | 50.0% | |
| GCGACATAGGAATGGGGTAA+AGG | - | chr8_2:25811191-25811210 | None:intergenic | 50.0% | |
| GGTTGAGCGACATAGGAATG+GGG | - | chr8_2:25811197-25811216 | None:intergenic | 50.0% | |
| CTGGTTGAGCGACATAGGAA+TGG | - | chr8_2:25811199-25811218 | None:intergenic | 50.0% | |
| TTGGGTGGATGAGAGAATGG+GGG | - | chr8_2:25811311-25811330 | None:intergenic | 50.0% | |
| GTTGGGTGGATGAGAGAATG+GGG | - | chr8_2:25811312-25811331 | None:intergenic | 50.0% | |
| ! | AATTGGTGGTCGAAGTTGGG+TGG | - | chr8_2:25811326-25811345 | None:intergenic | 50.0% |
| GTCTGGACTTCATCAGCTGT+TGG | + | chr8_2:25811726-25811745 | Msa1241920:CDS | 50.0% | |
| TTCGCCTGTACTGTCACCTT+GGG | - | chr8_2:25811775-25811794 | None:intergenic | 50.0% | |
| GGAGGCTATTGTGGAGTTCA+AGG | + | chr8_2:25811795-25811814 | Msa1241920:CDS | 50.0% | |
| CAGCAGCAGTTCGGAATTCT+TGG | - | chr8_2:25811840-25811859 | None:intergenic | 50.0% | |
| TGACAGACACAGCAGCAGTT+CGG | - | chr8_2:25811849-25811868 | None:intergenic | 50.0% | |
| GCTGAACCTCAAGAATCAGG+AGG | + | chr8_2:25812077-25812096 | Msa1241920:CDS | 50.0% | |
| CAACAAAGGAGTGGCGAGAC+AGG | + | chr8_2:25811067-25811086 | Msa1241920:CDS | 55.0% | |
| TCGCCTGTACTGTCACCTTG+GGG | - | chr8_2:25811774-25811793 | None:intergenic | 55.0% | |
| CTTCGCCTGTACTGTCACCT+TGG | - | chr8_2:25811776-25811795 | None:intergenic | 55.0% | |
| CAAGGTGACAGTACAGGCGA+AGG | + | chr8_2:25811774-25811793 | Msa1241920:CDS | 55.0% | |
| ACAGGCGAAGGAGGCTATTG+TGG | + | chr8_2:25811786-25811805 | Msa1241920:CDS | 55.0% | |
| GAAGAGACTGTGGCAGGCAA+GGG | + | chr8_2:25811910-25811929 | Msa1241920:CDS | 55.0% | |
| AGACTAGGCTCAAGTCGACC+TGG | + | chr8_2:25812232-25812251 | Msa1241920:CDS | 55.0% | |
| CAACAAAGGAGTGGCGAGAC+AGG | + | chr8_2:25811067-25811086 | Msa1241920:CDS | 55.0% | |
| TCGCCTGTACTGTCACCTTG+GGG | - | chr8_2:25811774-25811793 | None:intergenic | 55.0% | |
| CTTCGCCTGTACTGTCACCT+TGG | - | chr8_2:25811776-25811795 | None:intergenic | 55.0% | |
| CAAGGTGACAGTACAGGCGA+AGG | + | chr8_2:25811774-25811793 | Msa1241920:CDS | 55.0% | |
| ACAGGCGAAGGAGGCTATTG+TGG | + | chr8_2:25811786-25811805 | Msa1241920:CDS | 55.0% | |
| GAAGAGACTGTGGCAGGCAA+GGG | + | chr8_2:25811910-25811929 | Msa1241920:CDS | 55.0% | |
| AGACTAGGCTCAAGTCGACC+TGG | + | chr8_2:25812232-25812251 | Msa1241920:CDS | 55.0% | |
| GAGTGCAAGTAGCCACCCCA+AGG | + | chr8_2:25811756-25811775 | Msa1241920:CDS | 60.0% | |
| CCTGTACTGTCACCTTGGGG+TGG | - | chr8_2:25811771-25811790 | None:intergenic | 60.0% | |
| CCACCCCAAGGTGACAGTAC+AGG | + | chr8_2:25811768-25811787 | Msa1241920:CDS | 60.0% | |
| GGTGACAGTACAGGCGAAGG+AGG | + | chr8_2:25811777-25811796 | Msa1241920:CDS | 60.0% | |
| GGAAGAGACTGTGGCAGGCA+AGG | + | chr8_2:25811909-25811928 | Msa1241920:CDS | 60.0% | |
| GAGTGCAAGTAGCCACCCCA+AGG | + | chr8_2:25811756-25811775 | Msa1241920:CDS | 60.0% | |
| CCTGTACTGTCACCTTGGGG+TGG | - | chr8_2:25811771-25811790 | None:intergenic | 60.0% | |
| CCACCCCAAGGTGACAGTAC+AGG | + | chr8_2:25811768-25811787 | Msa1241920:CDS | 60.0% | |
| GGTGACAGTACAGGCGAAGG+AGG | + | chr8_2:25811777-25811796 | Msa1241920:CDS | 60.0% | |
| GGAAGAGACTGTGGCAGGCA+AGG | + | chr8_2:25811909-25811928 | Msa1241920:CDS | 60.0% | |
| CTGTGGCAGGCAAGGGTCGA+TGG | + | chr8_2:25811917-25811936 | Msa1241920:CDS | 65.0% | |
| GGCAGGCAAGGGTCGATGGA+AGG | + | chr8_2:25811921-25811940 | Msa1241920:CDS | 65.0% | |
| CTGTGGCAGGCAAGGGTCGA+TGG | + | chr8_2:25811917-25811936 | Msa1241920:CDS | 65.0% | |
| GGCAGGCAAGGGTCGATGGA+AGG | + | chr8_2:25811921-25811940 | Msa1241920:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 25810635 | 25812331 | 25810635 | ID=Msa1241920;Name=Msa1241920 |
| chr8_2 | mRNA | 25810635 | 25812331 | 25810635 | ID=Msa1241920-mRNA-1;Parent=Msa1241920;Name=Msa1241920-mRNA-1;_AED=0.00;_eAED=0.00;_QI=36|1|1|1|1|1|2|17|512 |
| chr8_2 | exon | 25810635 | 25811156 | 25810635 | ID=Msa1241920-mRNA-1:exon:9092;Parent=Msa1241920-mRNA-1 |
| chr8_2 | exon | 25811262 | 25812331 | 25811262 | ID=Msa1241920-mRNA-1:exon:9093;Parent=Msa1241920-mRNA-1 |
| chr8_2 | five_prime_UTR | 25810635 | 25810670 | 25810635 | ID=Msa1241920-mRNA-1:five_prime_utr;Parent=Msa1241920-mRNA-1 |
| chr8_2 | CDS | 25810671 | 25811156 | 25810671 | ID=Msa1241920-mRNA-1:cds;Parent=Msa1241920-mRNA-1 |
| chr8_2 | CDS | 25811262 | 25812314 | 25811262 | ID=Msa1241920-mRNA-1:cds;Parent=Msa1241920-mRNA-1 |
| chr8_2 | three_prime_UTR | 25812315 | 25812331 | 25812315 | ID=Msa1241920-mRNA-1:three_prime_utr;Parent=Msa1241920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
