AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1243110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1243110 MtrunA17_Chr8g0348951 98.442 321 5 0 1 321 1 321 0.0 655
Msa1243110 MtrunA17_Chr7g0247741 76.972 317 72 1 1 317 2 317 0.0 507
Msa1243110 MtrunA17_Chr1g0162361 32.372 312 189 8 9 306 26 329 1.34e-42 150
Msa1243110 MtrunA17_Chr4g0004071 30.450 289 192 4 29 317 35 314 5.61e-41 145
Msa1243110 MtrunA17_Chr4g0004061 30.189 318 201 8 10 317 9 315 1.43e-38 139
Msa1243110 MtrunA17_Chr1g0204181 33.225 307 189 8 6 302 60 360 2.79e-38 139
Msa1243110 MtrunA17_Chr3g0125421 30.124 322 194 8 1 302 27 337 2.08e-37 137
Msa1243110 MtrunA17_Chr5g0407781 31.271 291 182 6 10 296 5 281 1.52e-36 133
Msa1243110 MtrunA17_Chr6g0474391 32.704 318 181 11 6 302 60 365 2.25e-36 134
Msa1243110 MtrunA17_Chr4g0045431 29.968 317 185 11 2 293 23 327 4.12e-36 133
Msa1243110 MtrunA17_Chr4g0045441 29.688 320 197 10 6 306 27 337 6.46e-35 130
Msa1243110 MtrunA17_Chr8g0351101 31.132 318 185 10 6 302 50 354 7.84e-35 130
Msa1243110 MtrunA17_Chr7g0239111 29.448 326 200 12 9 322 54 361 8.28e-34 127
Msa1243110 MtrunA17_Chr2g0332191 29.010 293 195 6 10 296 52 337 1.61e-33 126
Msa1243110 MtrunA17_Chr2g0296371 31.716 268 159 9 9 262 49 306 1.83e-33 126
Msa1243110 MtrunA17_Chr8g0375601 29.967 307 189 9 2 294 40 334 1.96e-33 126
Msa1243110 MtrunA17_Chr8g0384461 26.384 307 209 7 8 302 45 346 3.19e-33 125
Msa1243110 MtrunA17_Chr4g0009561 30.818 318 189 8 9 305 6 313 4.42e-33 124
Msa1243110 MtrunA17_Chr3g0130391 28.076 317 187 7 11 302 67 367 7.56e-33 125
Msa1243110 MtrunA17_Chr7g0239101 28.972 321 202 12 9 319 54 358 7.78e-33 124
Msa1243110 MtrunA17_Chr4g0045411 32.000 275 165 9 1 260 26 293 8.89e-33 124
Msa1243110 MtrunA17_Chr1g0191201 29.870 308 193 8 11 302 54 354 1.30e-32 124
Msa1243110 MtrunA17_Chr3g0092531 34.035 285 166 9 23 300 26 295 3.25e-32 122
Msa1243110 MtrunA17_Chr1g0148771 28.333 300 202 7 10 307 63 351 3.86e-32 122
Msa1243110 MtrunA17_Chr4g0055911 29.605 304 192 9 8 296 7 303 8.36e-32 121
Msa1243110 MtrunA17_Chr1g0162351 27.879 330 202 13 2 307 66 383 8.78e-32 122
Msa1243110 MtrunA17_Chr4g0045451 27.832 309 200 7 6 296 27 330 1.43e-31 121
Msa1243110 MtrunA17_Chr2g0319491 29.242 277 161 8 6 269 34 288 1.71e-31 120
Msa1243110 MtrunA17_Chr2g0313111 28.972 321 188 10 10 310 28 328 2.28e-31 120
Msa1243110 MtrunA17_Chr8g0371921 31.203 266 167 6 2 260 36 292 3.16e-31 120
Msa1243110 MtrunA17_Chr5g0423201 30.323 310 180 13 2 294 41 331 3.45e-31 120
Msa1243110 MtrunA17_Chr5g0407731 28.522 291 190 6 10 296 33 309 3.52e-31 119
Msa1243110 MtrunA17_Chr7g0239121 30.000 320 207 10 9 322 50 358 4.20e-31 120
Msa1243110 MtrunA17_Chr1g0148781 30.743 296 188 9 9 295 17 304 6.92e-31 118
Msa1243110 MtrunA17_Chr6g0486831 28.125 320 187 10 10 299 21 327 2.51e-30 117
Msa1243110 MtrunA17_Chr3g0138351 28.659 328 201 8 8 317 5 317 3.15e-30 116
Msa1243110 MtrunA17_Chr1g0162321 28.485 330 200 13 2 307 66 383 5.06e-30 117
Msa1243110 MtrunA17_Chr3g0128001 28.179 291 192 7 9 292 37 317 9.39e-30 115
Msa1243110 MtrunA17_Chr5g0426891 29.032 310 204 9 6 309 40 339 9.66e-30 115
Msa1243110 MtrunA17_Chr8g0389941 28.125 320 187 11 10 299 34 340 1.02e-29 115
Msa1243110 MtrunA17_Chr7g0235951 27.517 298 199 8 6 295 68 356 1.43e-29 116
Msa1243110 MtrunA17_Chr8g0375671 28.710 310 192 11 1 294 43 339 1.45e-29 115
Msa1243110 MtrunA17_Chr7g0256741 26.667 300 194 9 10 295 10 297 2.06e-29 114
Msa1243110 MtrunA17_Chr4g0045471 28.231 294 179 10 27 299 52 334 2.43e-29 115
Msa1243110 MtrunA17_Chr4g0006371 27.517 298 196 8 8 292 60 350 2.64e-29 115
Msa1243110 MtrunA17_Chr8g0345831 27.946 297 196 8 2 292 39 323 6.12e-29 114
Msa1243110 MtrunA17_Chr3g0113641 29.749 279 163 10 2 261 42 306 6.54e-29 114
Msa1243110 MtrunA17_Chr4g0055871 28.618 304 190 8 8 296 7 298 1.53e-28 112
Msa1243110 MtrunA17_Chr3g0126741 28.704 324 205 11 1 312 55 364 2.47e-28 112
Msa1243110 MtrunA17_Chr4g0009541 27.302 315 208 8 6 308 8 313 2.85e-28 111
Msa1243110 MtrunA17_Chr8g0336781 27.961 304 203 9 1 297 91 385 2.85e-28 113
Msa1243110 MtrunA17_Chr1g0184151 28.621 290 192 7 10 292 38 319 4.63e-28 111
Msa1243110 MtrunA17_Chr5g0394071 37.162 148 87 4 122 269 5 146 6.04e-28 107
Msa1243110 MtrunA17_Chr7g0233661 43.089 123 66 2 147 269 2 120 1.03e-27 105
Msa1243110 MtrunA17_Chr7g0239821 28.772 285 188 7 22 300 78 353 1.97e-27 110
Msa1243110 MtrunA17_Chr5g0412671 27.597 308 209 7 3 303 36 336 2.32e-27 109
Msa1243110 MtrunA17_Chr2g0311741 30.435 299 182 11 4 292 26 308 2.88e-27 108
Msa1243110 MtrunA17_Chr8g0371931 28.358 268 172 6 2 260 36 292 4.83e-27 108
Msa1243110 MtrunA17_Chr5g0412651 28.197 305 193 8 3 294 36 327 6.73e-27 108
Msa1243110 MtrunA17_Chr5g0412681 25.828 302 198 8 2 294 30 314 8.73e-27 107
Msa1243110 MtrunA17_Chr7g0242551 26.948 308 201 9 3 295 47 345 9.65e-27 108
Msa1243110 MtrunA17_Chr5g0420981 30.263 304 188 12 2 294 47 337 9.79e-27 108
Msa1243110 MtrunA17_Chr5g0423191 27.393 303 201 10 1 294 38 330 1.09e-26 107
Msa1243110 MtrunA17_Chr2g0289341 26.316 304 192 11 4 295 3 286 1.36e-26 107
Msa1243110 MtrunA17_Chr3g0121141 25.157 318 202 11 3 305 2 298 1.59e-26 106
Msa1243110 MtrunA17_Chr8g0348081 28.939 311 188 9 2 297 57 349 1.86e-26 107
Msa1243110 MtrunA17_Chr7g0239071 29.310 290 189 8 37 322 29 306 2.11e-26 106
Msa1243110 MtrunA17_Chr2g0314401 26.000 300 197 10 8 294 49 336 2.64e-26 107
Msa1243110 MtrunA17_Chr2g0311691 28.896 308 189 8 4 296 62 354 2.70e-26 107
Msa1243110 MtrunA17_Chr2g0285931 26.543 324 192 11 10 306 28 332 2.78e-26 106
Msa1243110 MtrunA17_Chr2g0311761 29.276 304 184 11 6 295 69 355 3.25e-26 107
Msa1243110 MtrunA17_Chr5g0437181 28.990 307 190 11 3 295 47 339 5.32e-26 106
Msa1243110 MtrunA17_Chr8g0365241 32.270 282 170 11 1 272 48 318 5.40e-26 106
Msa1243110 MtrunA17_Chr2g0311681 28.247 308 191 8 4 296 62 354 6.00e-26 106
Msa1243110 MtrunA17_Chr5g0420941 28.808 302 198 9 1 294 36 328 6.54e-26 105
Msa1243110 MtrunA17_Chr3g0087031 27.564 312 183 14 3 293 53 342 7.54e-26 105
Msa1243110 MtrunA17_Chr2g0314381 29.348 276 168 11 8 269 75 337 8.43e-26 105
Msa1243110 MtrunA17_Chr1g0162191 28.975 283 164 8 1 264 38 302 8.79e-26 105
Msa1243110 MtrunA17_Chr8g0375571 28.772 285 179 11 1 272 36 309 9.14e-26 105
Msa1243110 MtrunA17_Chr4g0037611 38.060 134 78 3 129 262 1 129 1.09e-25 101
Msa1243110 MtrunA17_Chr8g0336751 30.592 304 179 12 6 295 95 380 1.10e-25 105
Msa1243110 MtrunA17_Chr1g0194321 26.837 313 184 8 8 292 18 313 1.60e-25 104
Msa1243110 MtrunA17_Chr5g0421101 27.300 337 207 14 1 321 38 352 1.61e-25 104
Msa1243110 MtrunA17_Chr8g0384481 27.036 307 203 8 6 301 60 356 1.75e-25 105
Msa1243110 MtrunA17_Chr3g0145171 30.137 292 176 12 10 286 52 330 2.36e-25 104
Msa1243110 MtrunA17_Chr3g0093741 29.630 297 183 8 10 295 56 337 2.51e-25 104
Msa1243110 MtrunA17_Chr5g0423221 27.362 307 191 12 3 293 64 354 2.68e-25 104
Msa1243110 MtrunA17_Chr3g0093761 29.392 296 184 8 10 295 56 336 2.94e-25 103
Msa1243110 MtrunA17_Chr3g0105281 28.707 317 179 12 10 310 34 319 3.54e-25 103
Msa1243110 MtrunA17_Chr5g0423251 27.063 303 202 10 1 294 38 330 3.79e-25 103
Msa1243110 MtrunA17_Chr8g0336631 28.431 306 193 11 2 295 57 348 3.97e-25 103
Msa1243110 MtrunA17_Chr5g0424201 29.054 296 190 8 8 293 42 327 4.08e-25 103
Msa1243110 MtrunA17_Chr4g0052251 25.566 309 192 9 4 292 23 313 4.17e-25 103
Msa1243110 MtrunA17_Chr7g0232161 30.702 228 143 8 24 245 76 294 4.44e-25 102
Msa1243110 MtrunA17_Chr5g0420901 30.970 268 168 10 1 260 37 295 4.57e-25 103
Msa1243110 MtrunA17_Chr8g0336761 29.197 274 160 8 2 261 57 310 5.56e-25 103
Msa1243110 MtrunA17_Chr5g0439011 26.144 306 198 10 1 295 1 289 7.99e-25 102
Msa1243110 MtrunA17_Chr5g0420951 31.034 261 160 10 10 260 53 303 1.10e-24 102
Msa1243110 MtrunA17_Chr4g0045461 27.070 314 201 7 6 299 27 332 1.11e-24 102
Msa1243110 MtrunA17_Chr1g0184101 27.759 299 189 8 9 294 37 321 1.31e-24 102
Msa1243110 MtrunA17_Chr2g0314391 29.057 265 167 9 8 261 68 322 1.57e-24 102
Msa1243110 MtrunA17_Chr4g0066121 28.981 314 185 11 6 301 61 354 1.69e-24 102
Msa1243110 MtrunA17_Chr8g0364471 28.244 262 173 6 4 261 66 316 2.00e-24 102
Msa1243110 MtrunA17_Chr5g0421011 29.851 268 167 10 2 260 41 296 2.36e-24 101
Msa1243110 MtrunA17_Chr5g0421091 30.855 269 168 10 1 260 36 295 3.52e-24 100
Msa1243110 MtrunA17_Chr8g0336851 27.832 309 190 10 2 295 57 347 4.25e-24 100
Msa1243110 MtrunA17_Chr2g0311711 29.245 318 184 11 4 302 66 361 6.23e-24 100
Msa1243110 MtrunA17_Chr3g0102041 24.843 318 216 8 2 308 36 341 7.38e-24 100
Msa1243110 MtrunA17_Chr4g0068891 26.207 290 203 6 10 294 20 303 8.16e-24 99.4
Msa1243110 MtrunA17_Chr2g0311701 29.063 320 185 12 4 302 68 366 8.27e-24 100
Msa1243110 MtrunA17_Chr4g0053251 27.113 284 163 7 10 261 8 279 1.22e-23 99.0
Msa1243110 MtrunA17_Chr1g0184111 27.835 291 196 7 10 293 37 320 1.28e-23 99.4
Msa1243110 MtrunA17_Chr8g0375701 27.586 319 198 11 6 307 51 353 2.00e-23 99.0
Msa1243110 MtrunA17_Chr1g0184121 27.972 286 190 8 10 287 37 314 2.89e-23 98.2
Msa1243110 MtrunA17_Chr3g0125201 25.926 297 195 10 10 293 3 287 3.24e-23 97.4
Msa1243110 MtrunA17_Chr8g0370711 30.519 308 187 12 10 303 52 346 4.65e-23 97.8
Msa1243110 MtrunA17_Chr5g0405411 27.612 268 174 7 2 260 36 292 5.60e-23 97.8
Msa1243110 MtrunA17_Chr5g0421041 26.014 296 200 10 8 294 43 328 5.99e-23 97.4
Msa1243110 MtrunA17_Chr7g0265351 27.946 297 184 7 10 293 39 318 1.03e-22 96.7
Msa1243110 MtrunA17_Chr7g0220011 27.393 303 183 9 10 295 39 321 1.39e-22 96.3
Msa1243110 MtrunA17_Chr1g0187831 28.065 310 176 8 6 293 71 355 1.42e-22 97.1
Msa1243110 MtrunA17_Chr8g0358941 27.636 275 159 7 8 260 25 281 1.65e-22 96.3
Msa1243110 MtrunA17_Chr3g0109041 28.479 309 193 10 3 293 35 333 1.98e-22 96.3
Msa1243110 MtrunA17_Chr2g0311831 27.575 301 192 9 6 295 69 354 2.04e-22 96.3
Msa1243110 MtrunA17_Chr1g0187821 27.835 291 186 8 4 284 66 342 2.13e-22 96.3
Msa1243110 MtrunA17_Chr5g0424211 28.016 257 175 4 10 260 42 294 2.21e-22 95.9
Msa1243110 MtrunA17_Chr4g0055591 29.231 260 167 7 7 261 58 305 2.69e-22 95.9
Msa1243110 MtrunA17_Chr5g0423211 26.480 321 181 10 1 293 38 331 2.93e-22 95.5
Msa1243110 MtrunA17_Chr1g0184161 26.531 294 193 9 10 292 38 319 3.77e-22 95.1
Msa1243110 MtrunA17_Chr4g0064781 31.271 291 180 7 3 284 43 322 4.04e-22 95.1
Msa1243110 MtrunA17_Chr7g0265221 27.844 334 195 12 8 310 65 383 5.76e-22 95.1
Msa1243110 MtrunA17_Chr7g0250511 26.059 307 205 9 10 304 49 345 7.03e-22 94.7
Msa1243110 MtrunA17_Chr8g0336861 26.710 307 197 9 2 295 57 348 7.10e-22 94.7
Msa1243110 MtrunA17_Chr8g0370721 28.479 309 191 13 10 301 52 347 7.88e-22 94.4
Msa1243110 MtrunA17_Chr3g0093751 27.946 297 188 8 10 295 56 337 8.78e-22 94.4
Msa1243110 MtrunA17_Chr6g0455481 27.972 286 182 8 10 284 42 314 9.50e-22 94.0
Msa1243110 MtrunA17_Chr2g0311631 29.861 288 173 10 9 279 54 329 1.07e-21 94.4
Msa1243110 MtrunA17_Chr1g0187811 28.947 304 164 11 6 284 189 465 1.40e-21 95.1
Msa1243110 MtrunA17_Chr5g0398291 25.723 311 211 9 6 303 48 351 1.06e-20 91.3
Msa1243110 MtrunA17_Chr3g0092581 37.815 119 72 2 183 300 50 167 1.27e-20 87.8
Msa1243110 MtrunA17_Chr1g0179801 25.397 315 202 8 8 303 64 364 2.28e-20 90.5
Msa1243110 MtrunA17_Chr8g0336801 38.793 116 67 2 183 295 25 139 4.70e-20 85.5
Msa1243110 MtrunA17_Chr7g0220001 25.704 284 190 8 10 284 41 312 7.72e-20 88.6
Msa1243110 MtrunA17_Chr7g0266651 27.473 273 168 11 2 260 51 307 2.60e-19 87.4
Msa1243110 MtrunA17_Chr1g0161111 26.623 308 185 12 5 293 127 412 3.05e-19 87.8
Msa1243110 MtrunA17_Chr1g0161081 25.914 301 196 12 5 293 68 353 3.10e-19 87.4
Msa1243110 MtrunA17_Chr2g0311861 27.241 290 151 10 24 295 83 330 6.52e-19 86.3
Msa1243110 MtrunA17_Chr7g0239091 25.658 304 189 9 10 300 160 439 1.17e-18 86.3
Msa1243110 MtrunA17_Chr4g0050031 27.302 315 183 10 10 300 62 354 1.20e-18 85.5
Msa1243110 MtrunA17_Chr8g0375681 26.038 265 175 8 39 294 15 267 1.63e-18 84.3
Msa1243110 MtrunA17_Chr5g0420721 32.620 187 117 6 110 294 53 232 2.19e-18 83.2
Msa1243110 MtrunA17_Chr1g0184241 28.617 311 183 11 10 302 69 358 2.76e-18 84.3
Msa1243110 MtrunA17_Chr8g0354261 26.996 263 174 8 8 261 66 319 3.34e-18 84.3
Msa1243110 MtrunA17_Chr4g0075471 33.553 152 93 5 147 295 11 157 4.25e-18 80.1
Msa1243110 MtrunA17_Chr2g0311921 27.863 262 168 9 10 261 54 304 6.21e-18 83.6
Msa1243110 MtrunA17_Chr8g0354241 27.007 274 160 11 8 261 66 319 6.91e-18 83.6
Msa1243110 MtrunA17_Chr3g0114861 25.490 306 200 8 8 300 38 328 1.21e-17 82.4
Msa1243110 MtrunA17_Chr2g0293931 26.374 182 127 4 119 294 7 187 2.12e-17 79.3
Msa1243110 MtrunA17_Chr1g0161041 38.983 118 67 4 179 293 261 376 2.25e-17 82.0
Msa1243110 MtrunA17_Chr6g0472861 24.667 300 207 10 9 298 69 359 2.57e-17 81.6
Msa1243110 MtrunA17_Chr1g0167951 25.974 308 191 9 4 295 52 338 3.12e-17 81.3
Msa1243110 MtrunA17_Chr7g0236011 28.188 298 201 7 4 295 66 356 3.18e-17 81.6
Msa1243110 MtrunA17_Chr7g0247991 28.939 311 178 11 4 293 66 354 4.28e-17 81.3
Msa1243110 MtrunA17_Chr4g0011311 29.098 244 138 10 4 233 66 288 4.42e-17 80.5
Msa1243110 MtrunA17_Chr2g0319521 33.333 117 72 3 117 233 14 124 5.73e-17 76.3
Msa1243110 MtrunA17_Chr7g0225881 27.740 292 169 13 10 287 67 330 8.58e-17 80.1
Msa1243110 MtrunA17_Chr5g0420881 37.607 117 71 2 179 294 11 126 1.15e-16 75.9
Msa1243110 MtrunA17_Chr5g0407591 34.375 96 61 1 211 304 5 100 6.02e-16 72.8
Msa1243110 MtrunA17_Chr3g0114871 28.017 232 157 7 8 234 40 266 1.26e-15 75.9
Msa1243110 MtrunA17_Chr1g0167931 48.101 79 40 1 183 261 187 264 1.36e-15 76.3
Msa1243110 MtrunA17_Chr1g0167911 26.316 266 168 7 6 261 55 302 2.07e-15 76.3
Msa1243110 MtrunA17_Chr7g0235981 32.370 173 105 5 118 284 133 299 6.86e-15 74.3
Msa1243110 MtrunA17_Chr8g0335411 26.510 298 202 8 4 293 66 354 8.37e-15 74.3
Msa1243110 MtrunA17_Chr1g0167961 26.667 270 160 9 10 261 69 318 1.55e-14 73.6
Msa1243110 MtrunA17_Chr3g0126761 37.288 118 72 2 183 300 105 220 1.78e-14 71.6
Msa1243110 MtrunA17_Chr6g0488511 26.625 323 183 16 10 307 3 296 4.37e-14 71.6
Msa1243110 MtrunA17_Chr1g0158011 27.604 192 127 5 116 302 67 251 9.80e-14 70.1
Msa1243110 MtrunA17_Chr8g0336871 34.532 139 74 6 168 302 40 165 3.04e-13 67.0
Msa1243110 MtrunA17_Chr4g0066991 26.756 299 180 9 4 293 66 334 9.04e-13 68.2
Msa1243110 MtrunA17_Chr2g0311611 45.000 60 27 1 179 232 11 70 1.08e-11 59.7
Msa1243110 MtrunA17_Chr1g0170631 33.898 118 76 2 183 299 62 178 7.72e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1243110 AT4G23340.1 56.698 321 132 4 1 318 1 317 8.53e-130 373
Msa1243110 AT5G51310.1 51.840 326 140 6 8 320 3 324 4.81e-117 341
Msa1243110 AT4G23340.2 61.809 199 74 2 122 318 1 199 1.69e-89 266
Msa1243110 AT1G80330.1 31.650 297 185 7 10 296 49 337 8.41e-42 149
Msa1243110 AT4G25420.1 32.039 309 190 8 8 302 59 361 1.57e-39 143
Msa1243110 AT1G52820.1 29.043 303 200 6 10 303 12 308 5.25e-38 137
Msa1243110 AT5G51810.1 30.421 309 195 9 6 302 59 359 7.33e-38 139
Msa1243110 AT4G21200.1 32.963 270 160 8 8 269 40 296 3.91e-36 133
Msa1243110 AT1G15550.1 29.167 312 201 8 9 313 56 354 6.39e-36 133
Msa1243110 AT1G55290.1 33.125 320 182 11 10 317 62 361 6.43e-36 133
Msa1243110 AT3G19010.1 29.630 324 188 11 9 307 27 335 2.89e-34 128
Msa1243110 AT3G19010.4 29.630 324 188 11 9 307 27 335 2.89e-34 128
Msa1243110 AT3G13610.1 32.776 299 172 9 10 295 62 344 5.13e-34 128
Msa1243110 AT5G07200.1 29.712 313 196 9 8 302 56 362 2.30e-33 127
Msa1243110 AT1G60980.1 31.677 322 187 10 2 302 49 358 2.86e-33 126
Msa1243110 AT1G44090.1 31.310 313 186 12 8 301 61 363 3.66e-32 123
Msa1243110 AT3G21420.1 31.229 301 176 12 10 292 55 342 1.32e-31 122
Msa1243110 AT1G50960.1 29.936 314 190 10 8 310 38 332 1.47e-31 121
Msa1243110 AT1G52790.1 31.186 295 186 9 10 295 5 291 2.70e-31 119
Msa1243110 AT1G52800.1 26.814 317 211 9 10 317 10 314 1.41e-30 118
Msa1243110 AT1G30040.1 26.712 292 195 8 10 292 31 312 1.65e-30 118
Msa1243110 AT4G21690.1 32.700 263 158 8 10 260 47 302 1.84e-30 118
Msa1243110 AT2G34555.1 28.094 299 185 6 8 292 25 307 1.86e-30 118
Msa1243110 AT1G78550.1 30.201 298 181 10 9 292 52 336 2.30e-30 118
Msa1243110 AT1G80340.1 29.630 297 193 7 10 299 50 337 2.71e-30 117
Msa1243110 AT3G19000.1 28.788 330 193 11 2 307 29 340 4.31e-30 117
Msa1243110 AT4G03070.1 28.896 308 200 7 10 306 14 313 6.43e-29 113
Msa1243110 AT2G38240.1 28.425 292 196 7 8 292 46 331 6.90e-29 114
Msa1243110 AT3G55970.1 29.703 303 186 9 10 295 52 344 3.98e-28 112
Msa1243110 AT1G78440.1 27.986 293 193 6 10 292 18 302 1.10e-27 110
Msa1243110 AT1G80320.1 29.630 297 195 8 10 298 9 299 1.37e-27 110
Msa1243110 AT1G17020.1 30.712 267 160 10 8 260 51 306 4.97e-27 109
Msa1243110 AT5G08640.2 28.094 299 206 6 6 300 39 332 7.36e-27 108
Msa1243110 AT5G08640.1 28.094 299 206 6 6 300 39 332 7.36e-27 108
Msa1243110 AT4G25300.1 29.630 270 167 10 1 260 48 304 7.85e-27 108
Msa1243110 AT3G19010.3 27.707 314 177 11 9 307 27 305 1.83e-26 107
Msa1243110 AT5G05600.1 27.389 314 198 11 8 303 60 361 3.31e-26 107
Msa1243110 AT3G50210.4 28.472 288 160 9 10 261 8 285 4.20e-26 106
Msa1243110 AT3G50210.1 28.472 288 160 9 10 261 8 285 4.20e-26 106
Msa1243110 AT3G50210.3 28.472 288 160 9 10 261 8 285 4.20e-26 106
Msa1243110 AT3G11180.1 27.742 310 198 10 8 303 93 390 5.91e-26 107
Msa1243110 AT1G05010.1 29.043 303 189 13 4 295 3 290 1.00e-25 105
Msa1243110 AT3G46500.5 27.152 302 199 7 10 296 17 312 1.92e-25 104
Msa1243110 AT1G47990.1 27.961 304 185 10 9 294 14 301 2.11e-25 104
Msa1243110 AT3G11180.2 27.575 301 193 9 8 295 93 381 2.63e-25 105
Msa1243110 AT1G62380.1 25.902 305 187 11 5 295 7 286 3.22e-25 103
Msa1243110 AT3G51240.1 27.547 265 178 5 2 260 35 291 4.13e-25 103
Msa1243110 AT1G77330.1 26.774 310 189 13 10 300 3 293 8.94e-25 102
Msa1243110 AT1G52820.2 28.821 229 150 5 10 231 12 234 9.00e-25 101
Msa1243110 AT3G49620.1 29.137 278 166 8 10 261 34 306 1.05e-24 102
Msa1243110 AT1G30040.2 27.468 233 150 8 10 233 31 253 1.23e-24 100
Msa1243110 AT3G49630.1 29.225 284 158 10 10 261 9 281 1.67e-24 102
Msa1243110 AT5G58660.1 27.273 297 172 9 8 273 32 315 2.22e-24 102
Msa1243110 AT5G63600.2 26.117 291 200 7 8 293 31 311 3.00e-24 101
Msa1243110 AT5G63590.1 29.932 294 196 8 8 296 12 300 4.45e-24 100
Msa1243110 AT4G10500.1 28.664 307 174 12 3 288 42 324 4.65e-24 100
Msa1243110 AT5G63600.1 25.862 290 201 6 8 293 31 310 5.63e-24 100
Msa1243110 AT4G25310.1 31.950 241 139 11 30 260 76 301 5.99e-24 100
Msa1243110 AT5G51810.2 29.630 243 151 9 6 236 59 293 6.34e-24 99.8
Msa1243110 AT3G49630.3 29.644 253 150 8 27 261 35 277 7.88e-24 100
Msa1243110 AT5G43450.1 30.605 281 158 9 10 276 61 318 1.00e-23 100
Msa1243110 AT1G12010.1 24.272 309 195 11 1 295 3 286 1.28e-23 99.4
Msa1243110 AT5G20400.1 28.707 317 199 10 1 301 36 341 1.40e-23 99.8
Msa1243110 AT1G02400.1 27.184 309 192 8 4 294 18 311 2.14e-23 99.0
Msa1243110 AT2G36690.2 27.211 294 180 10 8 284 59 335 3.01e-23 99.0
Msa1243110 AT2G36690.1 27.211 294 180 10 8 284 59 335 3.01e-23 99.0
Msa1243110 AT4G10490.1 26.246 301 200 9 3 294 40 327 3.21e-23 98.6
Msa1243110 AT5G24530.1 26.846 298 194 9 9 294 37 322 3.72e-23 98.2
Msa1243110 AT1G17010.1 27.517 298 192 9 9 293 53 339 3.81e-23 98.6
Msa1243110 AT1G06620.1 28.713 303 190 8 4 295 61 348 4.08e-23 98.6
Msa1243110 AT4G25420.2 31.356 236 142 8 8 229 59 288 7.84e-23 96.7
Msa1243110 AT3G19010.2 29.200 250 140 10 9 233 27 264 8.33e-23 96.7
Msa1243110 AT1G78550.2 28.839 267 167 9 36 292 5 258 2.62e-22 94.7
Msa1243110 AT3G19000.2 27.170 265 154 10 2 242 29 278 4.29e-22 94.4
Msa1243110 AT5G59530.1 28.333 300 188 11 6 292 59 344 6.04e-22 95.1
Msa1243110 AT3G12900.1 30.742 283 159 10 27 293 76 337 6.35e-22 95.1
Msa1243110 AT5G43440.1 28.814 295 187 10 10 292 62 345 6.42e-22 95.1
Msa1243110 AT3G46500.7 27.068 266 173 7 10 260 17 276 7.34e-22 94.0
Msa1243110 AT3G47190.1 26.861 309 171 12 8 292 30 307 7.65e-22 94.4
Msa1243110 AT3G60290.1 26.019 319 182 11 8 299 50 341 1.81e-21 94.0
Msa1243110 AT1G28030.1 27.778 306 202 10 2 295 5 303 2.42e-21 92.8
Msa1243110 AT5G54000.2 29.085 306 203 8 6 303 42 341 2.49e-21 93.2
Msa1243110 AT1G03400.1 29.098 244 157 8 7 247 53 283 2.76e-21 93.2
Msa1243110 AT5G20550.1 29.097 299 190 10 1 286 36 325 2.92e-21 93.2
Msa1243110 AT1G35190.1 26.791 321 183 8 10 296 12 314 4.49e-21 92.4
Msa1243110 AT1G04380.1 28.136 295 190 10 10 294 45 327 7.77e-21 92.0
Msa1243110 AT5G07480.1 26.006 323 217 8 2 312 41 353 3.04e-20 90.5
Msa1243110 AT2G44800.1 26.667 300 200 9 10 299 52 341 3.59e-20 90.1
Msa1243110 AT1G14130.1 26.923 286 189 7 8 287 7 278 4.17e-20 89.4
Msa1243110 AT5G12270.1 27.815 302 187 10 10 295 56 342 4.86e-20 89.7
Msa1243110 AT1G03410.2 27.888 251 161 7 4 247 56 293 5.63e-20 89.7
Msa1243110 AT1G03410.1 27.888 251 161 7 4 247 93 330 6.48e-20 89.7
Msa1243110 AT2G19590.1 25.490 306 199 11 8 301 9 297 1.22e-19 88.2
Msa1243110 AT2G30840.1 29.008 262 172 7 6 262 58 310 1.34e-19 88.6
Msa1243110 AT3G61400.1 26.449 276 192 6 22 292 82 351 1.38e-19 88.6
Msa1243110 AT5G59540.1 27.703 296 198 9 6 294 62 348 1.62e-19 88.6
Msa1243110 AT3G55970.2 29.461 241 143 9 10 233 52 282 1.85e-19 87.4
Msa1243110 AT5G58660.2 26.667 255 144 8 8 232 32 273 2.17e-19 86.7
Msa1243110 AT1G35190.2 26.168 321 162 10 10 296 12 291 2.55e-19 87.0
Msa1243110 AT2G30830.1 35.714 168 99 5 120 284 169 330 6.33e-19 86.7
Msa1243110 AT3G46490.1 25.305 328 179 10 10 296 17 319 6.39e-19 86.3
Msa1243110 AT1G04350.1 27.778 270 179 7 1 261 44 306 7.60e-19 86.7
Msa1243110 AT1G49390.1 27.397 292 199 7 1 284 36 322 2.03e-18 85.1
Msa1243110 AT5G63595.1 27.165 254 151 7 9 256 24 249 2.61e-18 84.0
Msa1243110 AT1G14120.2 25.939 293 197 7 10 296 8 286 3.64e-18 84.0
Msa1243110 AT1G14120.1 25.939 293 197 7 10 296 8 286 3.64e-18 84.0
Msa1243110 AT1G14120.3 25.939 293 197 7 10 296 8 286 3.64e-18 84.0
Msa1243110 AT1G06650.2 25.333 300 206 10 4 295 63 352 6.75e-18 84.0
Msa1243110 AT5G43450.2 29.832 238 135 8 10 233 61 280 1.07e-17 82.0
Msa1243110 AT4G22880.1 26.335 281 181 9 6 272 48 316 1.49e-17 82.8
Msa1243110 AT4G22880.2 26.335 281 181 9 6 272 48 316 1.49e-17 82.8
Msa1243110 AT4G22880.3 26.335 281 181 9 6 272 48 316 1.49e-17 82.8
Msa1243110 AT5G54000.1 29.588 267 179 7 40 303 1 261 1.78e-17 81.3
Msa1243110 AT1G15540.1 25.581 301 204 8 9 297 8 300 2.04e-17 82.0
Msa1243110 AT1G15540.4 25.581 301 204 8 9 297 8 300 2.04e-17 82.0
Msa1243110 AT1G15540.3 25.581 301 204 8 9 297 15 307 2.09e-17 82.0
Msa1243110 AT1G15540.2 25.581 301 204 8 9 297 11 303 2.23e-17 81.6
Msa1243110 AT3G46490.2 25.685 292 151 10 10 260 17 283 2.76e-17 81.3
Msa1243110 AT4G03050.2 34.783 138 86 3 183 319 275 409 3.75e-17 82.0
Msa1243110 AT4G03050.1 34.783 138 86 3 183 319 275 409 3.75e-17 82.0
Msa1243110 AT5G43935.1 23.490 298 181 7 10 293 19 283 7.13e-17 80.1
Msa1243110 AT4G25310.2 28.151 238 124 10 30 260 76 273 1.07e-16 79.7
Msa1243110 AT1G03400.2 25.735 272 158 9 7 247 53 311 1.88e-16 79.7
Msa1243110 AT4G16770.1 28.384 229 145 7 8 221 20 244 2.23e-16 78.2
Msa1243110 AT1G06645.1 25.253 297 207 9 4 295 76 362 3.54e-16 79.0
Msa1243110 AT4G25300.2 34.459 148 83 6 118 260 72 210 3.59e-16 77.4
Msa1243110 AT1G06640.1 25.000 308 197 9 4 295 63 352 5.30e-16 78.2
Msa1243110 AT3G50210.2 33.113 151 92 4 116 261 57 203 7.09e-16 76.3
Msa1243110 AT5G43440.2 29.114 237 148 9 10 237 62 287 1.02e-15 76.6
Msa1243110 AT1G02400.2 25.403 248 157 6 4 236 18 252 1.36e-15 75.9
Msa1243110 AT1G06620.2 28.992 238 146 7 4 233 61 283 1.39e-15 76.3
Msa1243110 AT3G51240.2 31.788 151 94 3 116 260 60 207 2.08e-15 75.5
Msa1243110 AT4G16765.6 26.606 218 139 7 88 296 34 239 3.16e-15 74.7
Msa1243110 AT4G16765.1 26.606 218 139 7 88 296 34 239 3.16e-15 74.7
Msa1243110 AT4G16765.2 26.606 218 139 7 88 296 34 239 3.16e-15 74.7
Msa1243110 AT5G05600.2 25.926 243 151 10 8 233 60 290 4.24e-15 74.7
Msa1243110 AT5G63580.1 28.634 227 154 4 10 233 19 240 4.55e-15 74.3
Msa1243110 AT3G46500.10 25.592 211 142 4 98 296 31 238 9.21e-15 73.2
Msa1243110 AT3G46500.1 25.592 211 142 4 98 296 31 238 9.21e-15 73.2
Msa1243110 AT4G16765.3 29.121 182 108 7 88 260 34 203 1.03e-14 72.8
Msa1243110 AT3G49630.2 32.237 152 87 4 116 261 67 208 1.05e-14 73.2
Msa1243110 AT2G30840.2 28.017 232 154 6 6 233 58 280 1.05e-14 73.9
Msa1243110 AT3G61400.2 26.291 213 150 4 22 233 82 288 1.61e-14 73.2
Msa1243110 AT5G63580.2 28.444 225 153 4 10 231 19 238 1.80e-14 72.4
Msa1243110 AT5G07480.2 27.885 208 140 5 110 312 42 244 4.38e-14 71.2
Msa1243110 AT1G04380.2 28.326 233 148 8 10 235 45 265 1.24e-13 70.5
Msa1243110 AT1G49390.2 27.823 248 171 6 40 284 1 243 3.64e-13 68.9
Msa1243110 AT3G46500.4 28.261 184 118 5 117 296 3 176 4.88e-13 67.0
Msa1243110 AT2G25450.1 25.097 259 182 6 6 261 56 305 5.12e-13 69.3
Msa1243110 AT4G16765.5 30.769 130 81 3 173 296 67 193 1.15e-12 66.2
Msa1243110 AT5G59540.2 27.801 241 156 9 2 233 53 284 1.81e-12 67.0
Msa1243110 AT3G46500.3 25.143 175 116 4 98 260 31 202 4.05e-11 62.4

Find 45 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATACATCACCAGAAATTT+TGG 0.124458 8_2:+28165614 Msa1243110:CDS
TCTTCCAAATCCAAAATTTC+TGG 0.144775 8_2:-28165624 None:intergenic
TGAGGATGAGAAAGTGATTT+TGG 0.209683 8_2:+28165899 Msa1243110:CDS
TTTGAAAGCCTTAGAGTTGA+TGG 0.255420 8_2:+28164638 Msa1243110:CDS
TGAAAACACATGAAGGAAAA+TGG 0.283049 8_2:+28165727 Msa1243110:CDS
TTTCTAAAGCATGCAAAGAT+TGG 0.316745 8_2:+28164453 Msa1243110:CDS
ATCTTATACCAAGATGAAAT+TGG 0.327780 8_2:+28165693 Msa1243110:CDS
GAAAGAGTTGTTAAAGAAGA+TGG 0.335661 8_2:-28164434 None:intergenic
GGTTCAGAAATGTCTATAAT+AGG 0.339282 8_2:-28164404 None:intergenic
CCATCTCCAACAACTTCATT+TGG 0.346444 8_2:-28165924 None:intergenic
TTCTAAAGCATGCAAAGATT+GGG 0.355396 8_2:+28164454 Msa1243110:CDS
GAAGATCAAGTTGAAGGTCT+TGG 0.389488 8_2:+28165642 Msa1243110:CDS
ATCAACATAAGGATATGAAT+TGG 0.397199 8_2:-28164378 None:intergenic
AGTTAGGTCCATCAACTCTA+AGG 0.397448 8_2:-28164646 None:intergenic
GCCAAAGAAAATCTATCAAC+AGG 0.402427 8_2:-28165861 None:intergenic
TTAGCAGAAACATAGAAGTT+AGG 0.432260 8_2:-28164662 None:intergenic
GAAGTCCTCCAATTTCATCT+TGG 0.437867 8_2:-28165701 None:intergenic
ACTCTAAGGCTTTCAAAGAA+TGG 0.440138 8_2:-28164632 None:intergenic
AGAGGAAGGTTTGAAAAGGT+TGG 0.443031 8_2:+28166011 Msa1243110:CDS
GAGAGAATAATCAAAGAGGA+AGG 0.444473 8_2:+28165997 Msa1243110:CDS
GGGTCATTAGTGGTAAATAT+TGG 0.455513 8_2:+28165771 Msa1243110:CDS
TTGGCACCAAATGAAGTTGT+TGG 0.459765 8_2:+28165918 Msa1243110:CDS
AAGCTTGTGTTAATGAGCTT+AGG 0.470070 8_2:+28165522 Msa1243110:CDS
TCCTTCTGAAGGGTCATTAG+TGG 0.488539 8_2:+28165761 Msa1243110:CDS
AAATAATCTGAACACACAAA+AGG 0.494776 8_2:-28165966 None:intergenic
TCAAAGAGGAAGGTTTGAAA+AGG 0.502768 8_2:+28166007 Msa1243110:CDS
GATTTGGAAGATCAAGTTGA+AGG 0.503070 8_2:+28165636 Msa1243110:CDS
CCAAATGAAGTTGTTGGAGA+TGG 0.511109 8_2:+28165924 Msa1243110:CDS
ATAATAGGAAGATCAACATA+AGG 0.531318 8_2:-28164389 None:intergenic
AGAGAACTATTGTAGTAAGA+TGG 0.543114 8_2:+28165476 Msa1243110:CDS
CTTGGAGTAATGATAAGTTA+CGG 0.550768 8_2:+28165808 Msa1243110:CDS
TTTAGAGAGAATAATCAAAG+AGG 0.551669 8_2:+28165993 Msa1243110:CDS
TCTAAAGCATGCAAAGATTG+GGG 0.552225 8_2:+28164455 Msa1243110:CDS
TCTGATACTAAACTTAAACT+TGG 0.555324 8_2:+28164563 Msa1243110:CDS
AGTTTAAGTTTAGTATCAGA+AGG 0.561095 8_2:-28164560 None:intergenic
CTTCAAGTGAAAACACATGA+AGG 0.568959 8_2:+28165720 Msa1243110:CDS
ACCACTAATGACCCTTCAGA+AGG 0.570837 8_2:-28165762 None:intergenic
TTATACCAAGATGAAATTGG+AGG 0.581682 8_2:+28165696 Msa1243110:CDS
GTGTTAATGAGCTTAGGAGA+AGG 0.583267 8_2:+28165528 Msa1243110:CDS
ATTTAGATAATAAATGAAGC+TGG 0.585134 8_2:-28164523 None:intergenic
TTGGTGATATGATGCAAGCT+TGG 0.588202 8_2:+28165790 Msa1243110:CDS
TTGTTGGAGATGGAAATAAG+AGG 0.590013 8_2:+28165934 Msa1243110:CDS
AATGGAGAAGCAATGAAATG+AGG 0.591887 8_2:-28164614 None:intergenic
ATTGATATAAGTCCTTCTGA+AGG 0.616593 8_2:+28165750 Msa1243110:CDS
TTGATATAAGTCCTTCTGAA+GGG 0.631337 8_2:+28165751 Msa1243110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAGATAATAAATGAAGC+TGG - chr8_2:28164526-28164545 None:intergenic 20.0%
!!! TAAGATTTTATAGAAGAGAA+AGG - chr8_2:28164590-28164609 None:intergenic 20.0%
!! AAAAACAGAATTCTAAATTC+AGG + chr8_2:28164708-28164727 Msa1243110:CDS 20.0%
!! ATTAAAAGGACTAATGTAAA+AGG - chr8_2:28164756-28164775 None:intergenic 20.0%
!! CAAAAGCTAAAAATAGTTTA+TGG - chr8_2:28164988-28165007 None:intergenic 20.0%
!!! GACTTTATTTATCTTTTGTT+AGG + chr8_2:28165093-28165112 Msa1243110:intron 20.0%
!!! TTAAGTTGTTTATTCAAACA+CGG + chr8_2:28165195-28165214 Msa1243110:intron 20.0%
!! ATTTAGATAATAAATGAAGC+TGG - chr8_2:28164526-28164545 None:intergenic 20.0%
!!! TAAGATTTTATAGAAGAGAA+AGG - chr8_2:28164590-28164609 None:intergenic 20.0%
!! AAAAACAGAATTCTAAATTC+AGG + chr8_2:28164708-28164727 Msa1243110:CDS 20.0%
!! ATTAAAAGGACTAATGTAAA+AGG - chr8_2:28164756-28164775 None:intergenic 20.0%
!! CAAAAGCTAAAAATAGTTTA+TGG - chr8_2:28164988-28165007 None:intergenic 20.0%
!!! GACTTTATTTATCTTTTGTT+AGG + chr8_2:28165093-28165112 Msa1243110:intron 20.0%
!!! TTAAGTTGTTTATTCAAACA+CGG + chr8_2:28165195-28165214 Msa1243110:intron 20.0%
! ATCAACATAAGGATATGAAT+TGG - chr8_2:28164381-28164400 None:intergenic 25.0%
! ATAATAGGAAGATCAACATA+AGG - chr8_2:28164392-28164411 None:intergenic 25.0%
!!! GTTAAAGAAGATGGTTTTAA+TGG - chr8_2:28164428-28164447 None:intergenic 25.0%
!! AGTTTAAGTTTAGTATCAGA+AGG - chr8_2:28164563-28164582 None:intergenic 25.0%
! TCTGATACTAAACTTAAACT+TGG + chr8_2:28164563-28164582 Msa1243110:CDS 25.0%
!! GAAAAACAGTTCTGATTAAA+AGG - chr8_2:28164770-28164789 None:intergenic 25.0%
! GCTTATTTGTGTTTATCTAT+TGG + chr8_2:28164829-28164848 Msa1243110:intron 25.0%
! AGATTAAAAAAACTAGAGTG+TGG - chr8_2:28165394-28165413 None:intergenic 25.0%
! TCTGAATTCAAAAAATGTCA+AGG + chr8_2:28165573-28165592 Msa1243110:CDS 25.0%
! ATCTTATACCAAGATGAAAT+TGG + chr8_2:28165693-28165712 Msa1243110:CDS 25.0%
! AAATAATCTGAACACACAAA+AGG - chr8_2:28165969-28165988 None:intergenic 25.0%
! TTTAGAGAGAATAATCAAAG+AGG + chr8_2:28165993-28166012 Msa1243110:CDS 25.0%
! ATCAACATAAGGATATGAAT+TGG - chr8_2:28164381-28164400 None:intergenic 25.0%
! ATAATAGGAAGATCAACATA+AGG - chr8_2:28164392-28164411 None:intergenic 25.0%
!!! GTTAAAGAAGATGGTTTTAA+TGG - chr8_2:28164428-28164447 None:intergenic 25.0%
!! AGTTTAAGTTTAGTATCAGA+AGG - chr8_2:28164563-28164582 None:intergenic 25.0%
! TCTGATACTAAACTTAAACT+TGG + chr8_2:28164563-28164582 Msa1243110:CDS 25.0%
!! GAAAAACAGTTCTGATTAAA+AGG - chr8_2:28164770-28164789 None:intergenic 25.0%
! GCTTATTTGTGTTTATCTAT+TGG + chr8_2:28164829-28164848 Msa1243110:intron 25.0%
! AGATTAAAAAAACTAGAGTG+TGG - chr8_2:28165394-28165413 None:intergenic 25.0%
! TCTGAATTCAAAAAATGTCA+AGG + chr8_2:28165573-28165592 Msa1243110:CDS 25.0%
! ATCTTATACCAAGATGAAAT+TGG + chr8_2:28165693-28165712 Msa1243110:CDS 25.0%
! AAATAATCTGAACACACAAA+AGG - chr8_2:28165969-28165988 None:intergenic 25.0%
! TTTAGAGAGAATAATCAAAG+AGG + chr8_2:28165993-28166012 Msa1243110:CDS 25.0%
GGTTCAGAAATGTCTATAAT+AGG - chr8_2:28164407-28164426 None:intergenic 30.0%
GAAAGAGTTGTTAAAGAAGA+TGG - chr8_2:28164437-28164456 None:intergenic 30.0%
!! TTTCTAAAGCATGCAAAGAT+TGG + chr8_2:28164453-28164472 Msa1243110:CDS 30.0%
!! TTCTAAAGCATGCAAAGATT+GGG + chr8_2:28164454-28164473 Msa1243110:CDS 30.0%
TTAGCAGAAACATAGAAGTT+AGG - chr8_2:28164665-28164684 None:intergenic 30.0%
TAAAAAAACTAGAGTGTGGT+TGG - chr8_2:28165390-28165409 None:intergenic 30.0%
AGAGAACTATTGTAGTAAGA+TGG + chr8_2:28165476-28165495 Msa1243110:CDS 30.0%
! CTATACATCACCAGAAATTT+TGG + chr8_2:28165614-28165633 Msa1243110:CDS 30.0%
! ATCACCAGAAATTTTGGATT+TGG + chr8_2:28165620-28165639 Msa1243110:CDS 30.0%
TCTTCCAAATCCAAAATTTC+TGG - chr8_2:28165627-28165646 None:intergenic 30.0%
TTATACCAAGATGAAATTGG+AGG + chr8_2:28165696-28165715 Msa1243110:CDS 30.0%
TGAAAACACATGAAGGAAAA+TGG + chr8_2:28165727-28165746 Msa1243110:CDS 30.0%
ATTGATATAAGTCCTTCTGA+AGG + chr8_2:28165750-28165769 Msa1243110:CDS 30.0%
TTGATATAAGTCCTTCTGAA+GGG + chr8_2:28165751-28165770 Msa1243110:CDS 30.0%
CTTGGAGTAATGATAAGTTA+CGG + chr8_2:28165808-28165827 Msa1243110:CDS 30.0%
!! ACCTGTTGATAGATTTTCTT+TGG + chr8_2:28165860-28165879 Msa1243110:CDS 30.0%
!!! GATTTTCTTTGGCTTTCTTT+TGG + chr8_2:28165871-28165890 Msa1243110:CDS 30.0%
! TATACAGTTAGAGATTTTGC+TGG + chr8_2:28166035-28166054 Msa1243110:CDS 30.0%
GGTTCAGAAATGTCTATAAT+AGG - chr8_2:28164407-28164426 None:intergenic 30.0%
GAAAGAGTTGTTAAAGAAGA+TGG - chr8_2:28164437-28164456 None:intergenic 30.0%
!! TTTCTAAAGCATGCAAAGAT+TGG + chr8_2:28164453-28164472 Msa1243110:CDS 30.0%
!! TTCTAAAGCATGCAAAGATT+GGG + chr8_2:28164454-28164473 Msa1243110:CDS 30.0%
TTAGCAGAAACATAGAAGTT+AGG - chr8_2:28164665-28164684 None:intergenic 30.0%
TAAAAAAACTAGAGTGTGGT+TGG - chr8_2:28165390-28165409 None:intergenic 30.0%
AGAGAACTATTGTAGTAAGA+TGG + chr8_2:28165476-28165495 Msa1243110:CDS 30.0%
! CTATACATCACCAGAAATTT+TGG + chr8_2:28165614-28165633 Msa1243110:CDS 30.0%
! ATCACCAGAAATTTTGGATT+TGG + chr8_2:28165620-28165639 Msa1243110:CDS 30.0%
TCTTCCAAATCCAAAATTTC+TGG - chr8_2:28165627-28165646 None:intergenic 30.0%
TTATACCAAGATGAAATTGG+AGG + chr8_2:28165696-28165715 Msa1243110:CDS 30.0%
TGAAAACACATGAAGGAAAA+TGG + chr8_2:28165727-28165746 Msa1243110:CDS 30.0%
ATTGATATAAGTCCTTCTGA+AGG + chr8_2:28165750-28165769 Msa1243110:CDS 30.0%
TTGATATAAGTCCTTCTGAA+GGG + chr8_2:28165751-28165770 Msa1243110:CDS 30.0%
CTTGGAGTAATGATAAGTTA+CGG + chr8_2:28165808-28165827 Msa1243110:CDS 30.0%
!! ACCTGTTGATAGATTTTCTT+TGG + chr8_2:28165860-28165879 Msa1243110:CDS 30.0%
!!! GATTTTCTTTGGCTTTCTTT+TGG + chr8_2:28165871-28165890 Msa1243110:CDS 30.0%
! TATACAGTTAGAGATTTTGC+TGG + chr8_2:28166035-28166054 Msa1243110:CDS 30.0%
! TCTAAAGCATGCAAAGATTG+GGG + chr8_2:28164455-28164474 Msa1243110:CDS 35.0%
AATGGAGAAGCAATGAAATG+AGG - chr8_2:28164617-28164636 None:intergenic 35.0%
!! ACTCTAAGGCTTTCAAAGAA+TGG - chr8_2:28164635-28164654 None:intergenic 35.0%
TTTGAAAGCCTTAGAGTTGA+TGG + chr8_2:28164638-28164657 Msa1243110:CDS 35.0%
CTTAGAGCTTAGAGTTTGTA+TGG + chr8_2:28164802-28164821 Msa1243110:intron 35.0%
AGCTTAGAGTTTGTATGGAA+TGG + chr8_2:28164807-28164826 Msa1243110:intron 35.0%
AAGCTATCTTGAAGAGCTTA+TGG - chr8_2:28165045-28165064 None:intergenic 35.0%
AAGCTTGTGTTAATGAGCTT+AGG + chr8_2:28165522-28165541 Msa1243110:CDS 35.0%
!! GATTTGGAAGATCAAGTTGA+AGG + chr8_2:28165636-28165655 Msa1243110:CDS 35.0%
CTTCAAGTGAAAACACATGA+AGG + chr8_2:28165720-28165739 Msa1243110:CDS 35.0%
GGGTCATTAGTGGTAAATAT+TGG + chr8_2:28165771-28165790 Msa1243110:CDS 35.0%
GCCAAAGAAAATCTATCAAC+AGG - chr8_2:28165864-28165883 None:intergenic 35.0%
! TGAGGATGAGAAAGTGATTT+TGG + chr8_2:28165899-28165918 Msa1243110:CDS 35.0%
TTGTTGGAGATGGAAATAAG+AGG + chr8_2:28165934-28165953 Msa1243110:CDS 35.0%
GAGAGAATAATCAAAGAGGA+AGG + chr8_2:28165997-28166016 Msa1243110:CDS 35.0%
TCAAAGAGGAAGGTTTGAAA+AGG + chr8_2:28166007-28166026 Msa1243110:CDS 35.0%
! TCTAAAGCATGCAAAGATTG+GGG + chr8_2:28164455-28164474 Msa1243110:CDS 35.0%
AATGGAGAAGCAATGAAATG+AGG - chr8_2:28164617-28164636 None:intergenic 35.0%
!! ACTCTAAGGCTTTCAAAGAA+TGG - chr8_2:28164635-28164654 None:intergenic 35.0%
TTTGAAAGCCTTAGAGTTGA+TGG + chr8_2:28164638-28164657 Msa1243110:CDS 35.0%
CTTAGAGCTTAGAGTTTGTA+TGG + chr8_2:28164802-28164821 Msa1243110:intron 35.0%
AGCTTAGAGTTTGTATGGAA+TGG + chr8_2:28164807-28164826 Msa1243110:intron 35.0%
AAGCTATCTTGAAGAGCTTA+TGG - chr8_2:28165045-28165064 None:intergenic 35.0%
AAGCTTGTGTTAATGAGCTT+AGG + chr8_2:28165522-28165541 Msa1243110:CDS 35.0%
!! GATTTGGAAGATCAAGTTGA+AGG + chr8_2:28165636-28165655 Msa1243110:CDS 35.0%
CTTCAAGTGAAAACACATGA+AGG + chr8_2:28165720-28165739 Msa1243110:CDS 35.0%
GGGTCATTAGTGGTAAATAT+TGG + chr8_2:28165771-28165790 Msa1243110:CDS 35.0%
GCCAAAGAAAATCTATCAAC+AGG - chr8_2:28165864-28165883 None:intergenic 35.0%
! TGAGGATGAGAAAGTGATTT+TGG + chr8_2:28165899-28165918 Msa1243110:CDS 35.0%
TTGTTGGAGATGGAAATAAG+AGG + chr8_2:28165934-28165953 Msa1243110:CDS 35.0%
GAGAGAATAATCAAAGAGGA+AGG + chr8_2:28165997-28166016 Msa1243110:CDS 35.0%
TCAAAGAGGAAGGTTTGAAA+AGG + chr8_2:28166007-28166026 Msa1243110:CDS 35.0%
AGTTAGGTCCATCAACTCTA+AGG - chr8_2:28164649-28164668 None:intergenic 40.0%
TACGAACTTGTGAGACTACT+CGG + chr8_2:28164854-28164873 Msa1243110:intron 40.0%
!! AAAGCAGTCTCTGAAGCTTA+TGG - chr8_2:28165012-28165031 None:intergenic 40.0%
CTTATGAACATGTTCCAAGC+TGG - chr8_2:28165221-28165240 None:intergenic 40.0%
GTGTTAATGAGCTTAGGAGA+AGG + chr8_2:28165528-28165547 Msa1243110:CDS 40.0%
!! GAAGATCAAGTTGAAGGTCT+TGG + chr8_2:28165642-28165661 Msa1243110:CDS 40.0%
GAAGTCCTCCAATTTCATCT+TGG - chr8_2:28165704-28165723 None:intergenic 40.0%
! TTGGTGATATGATGCAAGCT+TGG + chr8_2:28165790-28165809 Msa1243110:CDS 40.0%
!!! GGCTTTCTTTTGGTGTTTTG+AGG + chr8_2:28165881-28165900 Msa1243110:CDS 40.0%
TTGGCACCAAATGAAGTTGT+TGG + chr8_2:28165918-28165937 Msa1243110:CDS 40.0%
CCATCTCCAACAACTTCATT+TGG - chr8_2:28165927-28165946 None:intergenic 40.0%
CCAAATGAAGTTGTTGGAGA+TGG + chr8_2:28165924-28165943 Msa1243110:CDS 40.0%
AGAGGAAGGTTTGAAAAGGT+TGG + chr8_2:28166011-28166030 Msa1243110:CDS 40.0%
AGTTAGGTCCATCAACTCTA+AGG - chr8_2:28164649-28164668 None:intergenic 40.0%
TACGAACTTGTGAGACTACT+CGG + chr8_2:28164854-28164873 Msa1243110:intron 40.0%
!! AAAGCAGTCTCTGAAGCTTA+TGG - chr8_2:28165012-28165031 None:intergenic 40.0%
CTTATGAACATGTTCCAAGC+TGG - chr8_2:28165221-28165240 None:intergenic 40.0%
GTGTTAATGAGCTTAGGAGA+AGG + chr8_2:28165528-28165547 Msa1243110:CDS 40.0%
!! GAAGATCAAGTTGAAGGTCT+TGG + chr8_2:28165642-28165661 Msa1243110:CDS 40.0%
GAAGTCCTCCAATTTCATCT+TGG - chr8_2:28165704-28165723 None:intergenic 40.0%
! TTGGTGATATGATGCAAGCT+TGG + chr8_2:28165790-28165809 Msa1243110:CDS 40.0%
!!! GGCTTTCTTTTGGTGTTTTG+AGG + chr8_2:28165881-28165900 Msa1243110:CDS 40.0%
TTGGCACCAAATGAAGTTGT+TGG + chr8_2:28165918-28165937 Msa1243110:CDS 40.0%
CCATCTCCAACAACTTCATT+TGG - chr8_2:28165927-28165946 None:intergenic 40.0%
CCAAATGAAGTTGTTGGAGA+TGG + chr8_2:28165924-28165943 Msa1243110:CDS 40.0%
AGAGGAAGGTTTGAAAAGGT+TGG + chr8_2:28166011-28166030 Msa1243110:CDS 40.0%
ACGAACTTGTGAGACTACTC+GGG + chr8_2:28164855-28164874 Msa1243110:intron 45.0%
!! ACTCGGGTTGAGAGAGTTTA+TGG + chr8_2:28164871-28164890 Msa1243110:intron 45.0%
TTATTCAAACACGGCCAGCT+TGG + chr8_2:28165204-28165223 Msa1243110:intron 45.0%
! TCCTTCTGAAGGGTCATTAG+TGG + chr8_2:28165761-28165780 Msa1243110:CDS 45.0%
ACCACTAATGACCCTTCAGA+AGG - chr8_2:28165765-28165784 None:intergenic 45.0%
ACGAACTTGTGAGACTACTC+GGG + chr8_2:28164855-28164874 Msa1243110:intron 45.0%
!! ACTCGGGTTGAGAGAGTTTA+TGG + chr8_2:28164871-28164890 Msa1243110:intron 45.0%
TTATTCAAACACGGCCAGCT+TGG + chr8_2:28165204-28165223 Msa1243110:intron 45.0%
! TCCTTCTGAAGGGTCATTAG+TGG + chr8_2:28165761-28165780 Msa1243110:CDS 45.0%
ACCACTAATGACCCTTCAGA+AGG - chr8_2:28165765-28165784 None:intergenic 45.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 28164374 28166079 28164374 ID=Msa1243110;Name=Msa1243110
chr8_2 mRNA 28164374 28166079 28164374 ID=Msa1243110-mRNA-1;Parent=Msa1243110;Name=Msa1243110-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|322
chr8_2 exon 28164374 28164729 28164374 ID=Msa1243110-mRNA-1:exon:9847;Parent=Msa1243110-mRNA-1
chr8_2 exon 28165467 28166079 28165467 ID=Msa1243110-mRNA-1:exon:9848;Parent=Msa1243110-mRNA-1
chr8_2 CDS 28164374 28164729 28164374 ID=Msa1243110-mRNA-1:cds;Parent=Msa1243110-mRNA-1
chr8_2 CDS 28165467 28166079 28165467 ID=Msa1243110-mRNA-1:cds;Parent=Msa1243110-mRNA-1
Gene Sequence

>Msa1243110

ATGTCCAATTCATATCCTTATGTTGATCTTCCTATTATAGACATTTCTGAACCATTAAAACCATCTTCTTTAACAACTCTTTCTAAAGCATGCAAAGATTGGGGATTTTTTCATATAATTAATCATGATATCTCAAAAGATCTTTGTAGCCAGCTTCATTTATTATCTAAATACATATTTAATCTTCCTTCTGATACTAAACTTAAACTTGGTCCTTTCTCTTCTATAAAATCTTACACACCTCATTTCATTGCTTCTCCATTCTTTGAAAGCCTTAGAGTTGATGGACCTAACTTCTATGTTTCTGCTAAGAGTTCTGAAGATGTTTTGTTTGAAAAACAGAATTCTAAATTCAGTGAGACACTAGAGAACTATTGTAGTAAGATGGCAGATTTATCAGAAAGAATTTTAAAGCTTGTGTTAATGAGCTTAGGAGAAGGATTTGAGAAGCTATTTTATGATTCTGAATTCAAAAAATGTCAAGGTTACTTAAGAATAAACAACTATACATCACCAGAAATTTTGGATTTGGAAGATCAAGTTGAAGGTCTTGGAATGCACACTGACATGAGCTGCATTACTATCTTATACCAAGATGAAATTGGAGGACTTCAAGTGAAAACACATGAAGGAAAATGGATTGATATAAGTCCTTCTGAAGGGTCATTAGTGGTAAATATTGGTGATATGATGCAAGCTTGGAGTAATGATAAGTTACGGTCTTCTGAACATAGAGTTGTTTTGAAACAACCTGTTGATAGATTTTCTTTGGCTTTCTTTTGGTGTTTTGAGGATGAGAAAGTGATTTTGGCACCAAATGAAGTTGTTGGAGATGGAAATAAGAGGATGTATGATCCTTTTGTGTGTTCAGATTATTTGAAGTTTAGAGAGAATAATCAAAGAGGAAGGTTTGAAAAGGTTGGTTATACAGTTAGAGATTTTGCTGGAATTAAGTCTCAAATTATGTAA
Protein sequence

>Msa1243110

MSNSYPYVDLPIIDISEPLKPSSLTTLSKACKDWGFFHIINHDISKDLCSQLHLLSKYIFNLPSDTKLKLGPFSSIKSYTPHFIASPFFESLRVDGPNFYVSAKSSEDVLFEKQNSKFSETLENYCSKMADLSERILKLVLMSLGEGFEKLFYDSEFKKCQGYLRINNYTSPEILDLEDQVEGLGMHTDMSCITILYQDEIGGLQVKTHEGKWIDISPSEGSLVVNIGDMMQAWSNDKLRSSEHRVVLKQPVDRFSLAFFWCFEDEKVILAPNEVVGDGNKRMYDPFVCSDYLKFRENNQRGRFEKVGYTVRDFAGIKSQIM*