AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1255540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255540 MtrunA17_Chr8g0373811 99.262 542 4 0 1 542 1 542 0.0 1102
Msa1255540 MtrunA17_Chr8g0387311 43.902 410 200 5 124 519 179 572 4.43e-118 361
Msa1255540 MtrunA17_Chr4g0030381 41.162 396 216 7 137 523 94 481 1.92e-95 299
Msa1255540 MtrunA17_Chr3g0130121 30.476 420 262 7 122 521 118 527 4.46e-70 234
Msa1255540 MtrunA17_Chr4g0034941 24.257 404 251 12 150 517 87 471 5.61e-19 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255540 AT3G50780.1 62.752 545 174 10 1 541 1 520 0.0 661
Msa1255540 AT3G50780.2 62.752 545 174 10 1 541 1 520 0.0 661
Msa1255540 AT1G63850.1 39.498 438 228 6 107 527 116 533 1.72e-112 345
Msa1255540 AT5G60050.1 42.752 407 213 7 125 521 87 483 5.19e-107 329
Msa1255540 AT2G13690.1 32.853 347 221 6 179 521 198 536 6.66e-62 213
Msa1255540 AT2G24692.1 58.667 75 20 4 303 377 1 64 2.15e-15 71.2

Find 131 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATCTTGCTTGGAGTATT+TGG 0.197044 8_2:-54352180 Msa1255540:CDS
TATCACGTCAGCTGCATTTC+CGG 0.251823 8_2:-54351627 Msa1255540:CDS
CTGACGAGTTTGCGCTATTA+TGG 0.269153 8_2:-54351704 Msa1255540:CDS
CTGTTACCCCTGAAGGGTTT+TGG 0.274098 8_2:-54354455 Msa1255540:CDS
TCAAAGGATTCTGAGGCTTA+TGG 0.288465 8_2:+54354400 None:intergenic
GACGATTCTCACCTTGCCTT+TGG 0.323247 8_2:-54351442 Msa1255540:CDS
AAACTTGTTGAGGAAGGAAT+TGG 0.324835 8_2:-54351468 Msa1255540:CDS
TGGGTGATGTTAGGCTTAAT+AGG 0.325315 8_2:-54354518 Msa1255540:CDS
TATTGGAACATTCCTAATCT+TGG 0.326556 8_2:+54354479 None:intergenic
GTTGGAAGTTTCTTGAAAAC+TGG 0.330998 8_2:-54351390 Msa1255540:CDS
TCAAAAGCTCTTTGAAGATT+AGG 0.335360 8_2:+54351357 None:intergenic
GCTACTATCTTCTTTACATT+AGG 0.339737 8_2:+54350990 None:intergenic
ATAGAAACTTGTAACTTGTT+TGG 0.343996 8_2:-54354631 Msa1255540:five_prime_UTR
TCGCATTCTTCGAATTCTTA+AGG 0.353930 8_2:-54353884 Msa1255540:intron
GGACAACACCAAAACCCTTC+AGG 0.357166 8_2:+54354447 None:intergenic
AGAAAGGTGGCCATTGAGTT+TGG 0.361556 8_2:-54354150 Msa1255540:CDS
GTAACTTGTTTGGTTATGTC+TGG 0.364254 8_2:-54354621 Msa1255540:five_prime_UTR
AACTCAATGGCCACCTTTCT+CGG 0.368808 8_2:+54354153 None:intergenic
TGACGAGTTTGCGCTATTAT+GGG 0.369876 8_2:-54351703 Msa1255540:CDS
CTCAGCAGCTAAAGATGTTC+CGG 0.370037 8_2:+54354209 None:intergenic
CTCAAGAGCAACGAGGAAAA+AGG 0.376567 8_2:-54351996 Msa1255540:CDS
CCTCAGGTTGCAGAATTCCT+TGG 0.385902 8_2:-54352218 Msa1255540:intron
CAACTCCAAGGGGAAGGAAT+TGG 0.389469 8_2:-54352101 Msa1255540:CDS
CAAAAGAAGAATTCAACTTC+CGG 0.390235 8_2:-54354742 Msa1255540:five_prime_UTR
CCTTCAGGGGTAACAGCTAT+TGG 0.398564 8_2:+54354462 None:intergenic
CAATTGTAGTCACTCATTAG+AGG 0.401429 8_2:+54351522 None:intergenic
TGACTCCAATTCCTTCCCCT+TGG 0.407290 8_2:+54352096 None:intergenic
GCCATTGAGTTTGGTGAACC+TGG 0.411577 8_2:-54354141 Msa1255540:CDS
TGGTGGTGATGAAGAAGGTT+TGG 0.417966 8_2:+54354371 None:intergenic
CTCTAATGAGTGACTACAAT+TGG 0.420651 8_2:-54351521 Msa1255540:CDS
ATGGATGCAGGTCGTTTGAT+AGG 0.421625 8_2:-54351491 Msa1255540:CDS
ATCTTGCTTGGAGTATTTGG+AGG 0.422152 8_2:-54352177 Msa1255540:CDS
ACGGAATCTCTTTCGTCGCT+TGG 0.422765 8_2:+54351798 None:intergenic
ATGTGGGAAAGTGTGTCTTT+TGG 0.424661 8_2:+54352032 None:intergenic
AATTGCCGCGTGTCTTTCAA+TGG 0.427681 8_2:+54351567 None:intergenic
TTATAAACATGGGTGATGTT+AGG 0.428103 8_2:-54354527 Msa1255540:exon
CTCCTGTGTCCAATCTTGCT+TGG 0.430730 8_2:-54352189 Msa1255540:CDS
CAATCTTAAATTAGTTGTGT+TGG 0.431041 8_2:-54354568 Msa1255540:five_prime_UTR
AACTTGTTGAGGAAGGAATT+GGG 0.435339 8_2:-54351467 Msa1255540:CDS
TTGAAGCTGATAACCTTTCG+TGG 0.435969 8_2:-54351758 Msa1255540:CDS
AATTCAACTTCCGGAAATAG+TGG 0.436657 8_2:-54354733 Msa1255540:five_prime_UTR
CCAAATACTCCAAGCAAGAT+TGG 0.445151 8_2:+54352180 None:intergenic
CCAATAGCTGTTACCCCTGA+AGG 0.452433 8_2:-54354462 Msa1255540:CDS
TCTTCTTCATCTCCAACCCA+TGG 0.465749 8_2:+54352149 None:intergenic
GGGTGATGTTAGGCTTAATA+GGG 0.472361 8_2:-54354517 Msa1255540:CDS
TTGGAGGCTGTCCCATGGGT+TGG 0.474603 8_2:-54352161 Msa1255540:CDS
CTATATGTCGGCATTGGTAG+AGG 0.474949 8_2:-54351600 Msa1255540:CDS
TCAGAAATCACCAATCTAGA+TGG 0.476164 8_2:+54354270 None:intergenic
GATTCTCACCTTGCCTTTGG+AGG 0.479335 8_2:-54351439 Msa1255540:CDS
TGCACCTGCACCATCTAGAT+TGG 0.483137 8_2:-54354280 Msa1255540:CDS
GTCGCTTGGTTTATCTGCAA+AGG 0.490075 8_2:+54351812 None:intergenic
CTGTTAAGTTGAGTGTGCAT+AGG 0.496097 8_2:-54354074 Msa1255540:CDS
TCAGTCACCTGCACTGCAAC+CGG 0.496798 8_2:+54354315 None:intergenic
GACAACACCAAAACCCTTCA+GGG 0.497421 8_2:+54354448 None:intergenic
CTTGGTTTATCTGCAAAGGT+TGG 0.497518 8_2:+54351816 None:intergenic
ACGTGATAACGGGACACAAT+CGG 0.504728 8_2:+54351642 None:intergenic
GCTATTATGGGCAAACCAGC+AGG 0.504887 8_2:-54351691 Msa1255540:CDS
TGAGAACAAGTTCGATAATG+TGG 0.506236 8_2:+54352015 None:intergenic
AATTGAAACCATGCCGAGAA+AGG 0.506696 8_2:-54354166 Msa1255540:CDS
AAATGCAGCTGACGTGATAA+CGG 0.507431 8_2:+54351631 None:intergenic
AATGCAGCTGACGTGATAAC+GGG 0.507760 8_2:+54351632 None:intergenic
AAGAAATTCGTTTCAACACA+GGG 0.510836 8_2:+54352072 None:intergenic
AATGGCCACCTTTCTCGGCA+TGG 0.512463 8_2:+54354158 None:intergenic
GATATGTCTTGTCTTCAAAT+CGG 0.513106 8_2:-54353997 Msa1255540:CDS
GATAGGAAACTTGTTGAGGA+AGG 0.514872 8_2:-54351474 Msa1255540:CDS
GAAGAAATTCGTTTCAACAC+AGG 0.515803 8_2:+54352071 None:intergenic
TTCTGAAACACAACAGGTGA+AGG 0.516765 8_2:+54354426 None:intergenic
GAAAATAATCATCAAAAGCA+TGG 0.517347 8_2:-54355261 Msa1255540:five_prime_UTR
TAGTTCGACGATGTCAAAGA+AGG 0.520107 8_2:-54351271 Msa1255540:CDS
AGGCCATATGTCGAAAATCA+AGG 0.522726 8_2:-54351309 Msa1255540:CDS
AATGTAGTATTGGTGTAGAA+AGG 0.526581 8_2:-54354239 Msa1255540:CDS
ACCTTCATATCACAAGTTCC+AGG 0.526980 8_2:+54354123 None:intergenic
GAAATATATGTTGAAACTGT+TGG 0.528920 8_2:-54353958 Msa1255540:CDS
TGTTAAGTTGAGTGTGCATA+GGG 0.531583 8_2:-54354073 Msa1255540:CDS
TCCAGGTTCACCAAACTCAA+TGG 0.531782 8_2:+54354140 None:intergenic
AGTATTTGGAGGCTGTCCCA+TGG 0.534381 8_2:-54352166 Msa1255540:CDS
GTAATTGCATGAGTTGATTG+TGG 0.536624 8_2:-54351114 Msa1255540:three_prime_UTR
GTATAATCTCTTCAAAGGAG+TGG 0.537681 8_2:-54351039 Msa1255540:three_prime_UTR
ATCAAGGACAAGCCAAGATT+AGG 0.538056 8_2:-54354491 Msa1255540:CDS
TAATCATCAAAAGCATGGAA+TGG 0.539436 8_2:-54355256 Msa1255540:five_prime_UTR
ATCTCTTCAAAGGAGTGGAA+TGG 0.542209 8_2:-54351034 Msa1255540:three_prime_UTR
GAACTATCGATTTCATCTCC+CGG 0.542650 8_2:+54351970 None:intergenic
GTTACTGTCTCTCTTCAAGC+AGG 0.547102 8_2:-54351847 Msa1255540:CDS
GGTTGTGGTGGTGATGAAGA+AGG 0.549863 8_2:+54354366 None:intergenic
GATGATCAACAATGTAGTAT+TGG 0.551435 8_2:-54354249 Msa1255540:CDS
ATTGGTTACAACATGGATGC+AGG 0.552265 8_2:-54351503 Msa1255540:CDS
AATCATGTCATTACAGCTGT+CGG 0.558798 8_2:+54351899 None:intergenic
GTAAGACAGCTAACTCCTGC+TGG 0.560813 8_2:+54351676 None:intergenic
CAATAGCTGTTACCCCTGAA+GGG 0.563513 8_2:-54354461 Msa1255540:CDS
GTATTTGGAGGCTGTCCCAT+GGG 0.567349 8_2:-54352165 Msa1255540:CDS
GGTGTAGAAAGGTCTTTAGC+CGG 0.569948 8_2:-54354228 Msa1255540:CDS
ATCACCAATCTAGATGGTGC+AGG 0.573798 8_2:+54354276 None:intergenic
AGGCTTAATAGGGTGGATCA+AGG 0.573951 8_2:-54354507 Msa1255540:CDS
GGCAATTGTTATTGCAAACA+TGG 0.574707 8_2:-54351551 Msa1255540:CDS
AAGAGCTATATGCTTTACTA+CGG 0.577697 8_2:+54351779 None:intergenic
GAGAACAAGTTCGATAATGT+GGG 0.578262 8_2:+54352016 None:intergenic
TATATGTCGGCATTGGTAGA+GGG 0.580936 8_2:-54351599 Msa1255540:CDS
CTTCTTCATCTCCAACCCAT+GGG 0.582332 8_2:+54352150 None:intergenic
GGTGGCGCAGAACATTCATT+AGG 0.583277 8_2:-54351329 Msa1255540:CDS
GGAAAACTATATGTCGGCAT+TGG 0.583296 8_2:-54351606 Msa1255540:CDS
TCTTCAAATCGGCGATTGTG+AGG 0.585981 8_2:-54353986 Msa1255540:CDS
TGAAACCATGCCGAGAAAGG+TGG 0.587285 8_2:-54354163 Msa1255540:CDS
TAACTATATAGTCAAGTCAA+AGG 0.587691 8_2:+54354682 None:intergenic
ACCTGGAACTTGTGATATGA+AGG 0.591247 8_2:-54354124 Msa1255540:CDS
ATACTTTGTTGATCCTCCAA+AGG 0.591747 8_2:+54351426 None:intergenic
AAATATCAAGCAACCACGAA+AGG 0.592897 8_2:+54351745 None:intergenic
TCAACTGTACTACAACTCCA+AGG 0.597889 8_2:-54352113 Msa1255540:CDS
GGACACAGGAGCTGAAGCCA+AGG 0.604229 8_2:+54352201 None:intergenic
CAACTGTACTACAACTCCAA+GGG 0.613126 8_2:-54352112 Msa1255540:CDS
TTGTTGATCCTCCAAAGGCA+AGG 0.614611 8_2:+54351431 None:intergenic
TGATGTTAGGCTTAATAGGG+TGG 0.622274 8_2:-54354514 Msa1255540:CDS
GTACTACAACTCCAAGGGGA+AGG 0.630843 8_2:-54352107 Msa1255540:CDS
ATATGTCGGCATTGGTAGAG+GGG 0.634379 8_2:-54351598 Msa1255540:CDS
CATGTCATTACAGCTGTCGG+TGG 0.634591 8_2:+54351902 None:intergenic
GTGCAGGTGACTGAGAGAAG+AGG 0.635000 8_2:-54354306 Msa1255540:CDS
GTTTGATAGGAAACTTGTTG+AGG 0.638441 8_2:-54351478 Msa1255540:CDS
GAAGACTATTGTTCTCTCTG+AGG 0.644852 8_2:+54351940 None:intergenic
GACTACAATTGGTTACAACA+TGG 0.650462 8_2:-54351510 Msa1255540:CDS
CATCGTCGAACTATCTGACA+CGG 0.654485 8_2:+54351281 None:intergenic
AACTGTACTACAACTCCAAG+GGG 0.672357 8_2:-54352111 Msa1255540:CDS
ATTTCCGGAAAACTATATGT+CGG 0.673187 8_2:-54351612 Msa1255540:CDS
TGTTGGTTTGATGTACTGCA+AGG 0.678438 8_2:-54353941 Msa1255540:CDS
TAATAGCGCAAACTCGTCAG+CGG 0.686918 8_2:+54351707 None:intergenic
CTCCAAGCAAGATTGGACAC+AGG 0.688976 8_2:+54352187 None:intergenic
TGGAACTTGTGATATGAAGG+TGG 0.701908 8_2:-54354121 Msa1255540:CDS
ACAACACCAAAACCCTTCAG+GGG 0.710989 8_2:+54354449 None:intergenic
TGTTGCCATTGAAAGACACG+CGG 0.716327 8_2:-54351572 Msa1255540:CDS
AGTTGATTGTGGATTCAGTG+TGG 0.719043 8_2:-54351103 Msa1255540:three_prime_UTR
TTGTTGAGGAAGGAATTGGG+AGG 0.742952 8_2:-54351464 Msa1255540:CDS
ACTTGTTCTCAAGAGCAACG+AGG 0.760638 8_2:-54352003 Msa1255540:CDS
ACTGCAAGGAAATGAAACAG+CGG 0.767063 8_2:-54353927 Msa1255540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGATTTTTTTATAAACAT+GGG - chr8_2:54351711-54351730 Msa1255540:CDS 10.0%
!! ATTAAAACTTTACCTAAAAA+TGG + chr8_2:54351171-54351190 None:intergenic 15.0%
!! TTTATATTATTTCCTCAAAA+GGG + chr8_2:54351390-54351409 None:intergenic 15.0%
!!! TTTTATATTATTTCCTCAAA+AGG + chr8_2:54351391-54351410 None:intergenic 15.0%
!!! CATTGATTTTTTTATAAACA+TGG - chr8_2:54351710-54351729 Msa1255540:CDS 15.0%
!! TATATTAACTATTAAGCTAA+CGG + chr8_2:54352472-54352491 None:intergenic 15.0%
!! TTAGCTTAATAGTTAATATA+TGG - chr8_2:54352472-54352491 Msa1255540:intron 15.0%
!! AAAATATAAACTGTAAGTTT+AGG + chr8_2:54353133-54353152 None:intergenic 15.0%
!! TCTAATATATCAGAATAAAA+TGG + chr8_2:54353207-54353226 None:intergenic 15.0%
!!! TTTTATATAACTGAGTTTAA+CGG - chr8_2:54355027-54355046 Msa1255540:intron 15.0%
!!! AAATTCTTTACTTTAAAGTG+AGG - chr8_2:54351330-54351349 Msa1255540:CDS 20.0%
!!! TATTGTTTATGTTTTCATGA+AGG - chr8_2:54351416-54351435 Msa1255540:CDS 20.0%
!!! AAATTTTTTTCCACTATTTC+CGG + chr8_2:54351528-54351547 None:intergenic 20.0%
!!! TTTCTTTTCTGCAAAAATTT+CGG - chr8_2:54352220-54352239 Msa1255540:intron 20.0%
!!! GAAAGGAGTATTAAAATTAA+TGG + chr8_2:54352406-54352425 None:intergenic 20.0%
!! GAAACATTATGATTATGAAA+TGG - chr8_2:54352690-54352709 Msa1255540:intron 20.0%
!!! TTCAAGAATAATTGCTTTTA+AGG - chr8_2:54352749-54352768 Msa1255540:intron 20.0%
!!! ATTAATGGATGCATATTTTT+TGG - chr8_2:54352774-54352793 Msa1255540:intron 20.0%
!!! TTAATGGATGCATATTTTTT+GGG - chr8_2:54352775-54352794 Msa1255540:intron 20.0%
!! TCATGTAACAAAAATAAACA+AGG + chr8_2:54352804-54352823 None:intergenic 20.0%
!! ACATAAGTATCTTTATAGAA+TGG + chr8_2:54352835-54352854 None:intergenic 20.0%
!! GAAATAAAATAAGACAACAT+AGG + chr8_2:54353292-54353311 None:intergenic 20.0%
!! CATATTCATAAATTCAACAT+AGG - chr8_2:54353311-54353330 Msa1255540:intron 20.0%
!!! ATATTGATTATCTCAAAACT+TGG + chr8_2:54353491-54353510 None:intergenic 20.0%
!! TACATAATAGAATTTATGCT+AGG - chr8_2:54353710-54353729 Msa1255540:intron 20.0%
!!! CTGAGGAAATATTATATTTT+AGG + chr8_2:54354016-54354035 None:intergenic 20.0%
!! CTAAAATATAATATTTCCTC+AGG - chr8_2:54354014-54354033 Msa1255540:CDS 20.0%
!!! TTTTTGTATAATCTCTTCAA+AGG - chr8_2:54355204-54355223 Msa1255540:five_prime_UTR 20.0%
! GAAAATAATCATCAAAAGCA+TGG - chr8_2:54350987-54351006 Msa1255540:three_prime_UTR 25.0%
!! GGAAATAGTGGAAAAAAATT+TGG - chr8_2:54351527-54351546 Msa1255540:CDS 25.0%
! TAACTATATAGTCAAGTCAA+AGG + chr8_2:54351569-54351588 None:intergenic 25.0%
!!! ATAGAAACTTGTAACTTGTT+TGG - chr8_2:54351617-54351636 Msa1255540:CDS 25.0%
! CAATCTTAAATTAGTTGTGT+TGG - chr8_2:54351680-54351699 Msa1255540:CDS 25.0%
!!! TTTTTCTGAACACTAGTTTT+CGG + chr8_2:54351912-54351931 None:intergenic 25.0%
!!! ATATGAAGGTGGTTTTATTA+GGG - chr8_2:54352138-54352157 Msa1255540:CDS 25.0%
! GAAATATATGTTGAAACTGT+TGG - chr8_2:54352290-54352309 Msa1255540:intron 25.0%
! ACCAGAAAGATTTATCATAA+GGG + chr8_2:54352448-54352467 None:intergenic 25.0%
! TACCAGAAAGATTTATCATA+AGG + chr8_2:54352449-54352468 None:intergenic 25.0%
!! AACTGCATATTCATTTGTTA+TGG - chr8_2:54352590-54352609 Msa1255540:intron 25.0%
!! CATATAAGAACTTTGAGTTA+AGG - chr8_2:54352615-54352634 Msa1255540:intron 25.0%
!!! ATTGCTTTTAAGGCAATTAA+TGG - chr8_2:54352759-54352778 Msa1255540:intron 25.0%
!!! TTAGAGCTTTTTTTAAGCTA+TGG - chr8_2:54352900-54352919 Msa1255540:intron 25.0%
! CACTAAATTTGATATAATGG+AGG + chr8_2:54353247-54353266 None:intergenic 25.0%
! GGACACTAAATTTGATATAA+TGG + chr8_2:54353250-54353269 None:intergenic 25.0%
! ATAAAATAAGACAACATAGG+AGG + chr8_2:54353289-54353308 None:intergenic 25.0%
!!! TTCTTTTGAAAGTATTTCCT+TGG + chr8_2:54353456-54353475 None:intergenic 25.0%
! CAAAGATATCATCTAAGTTA+AGG - chr8_2:54353585-54353604 Msa1255540:intron 25.0%
! TTTAATGTTTCTTCTCCAAA+TGG + chr8_2:54353979-54353998 None:intergenic 25.0%
!!! AACAAAGTATTTTGCTTTCT+TGG - chr8_2:54354835-54354854 Msa1255540:intron 25.0%
!!! ACAAAGTATTTTGCTTTCTT+GGG - chr8_2:54354836-54354855 Msa1255540:intron 25.0%
! TAATCATCAAAAGCATGGAA+TGG - chr8_2:54350992-54351011 Msa1255540:three_prime_UTR 30.0%
!!! CCATTCTCTTTTTGCTTTTT+CGG - chr8_2:54351056-54351075 Msa1255540:three_prime_UTR 30.0%
! TTCACTCATTGTTTTCAACA+CGG - chr8_2:54351127-54351146 Msa1255540:three_prime_UTR 30.0%
!! TTTCAGAACAGACCATTTTT+AGG - chr8_2:54351156-54351175 Msa1255540:three_prime_UTR 30.0%
TCTGATCTGTAGTTAACTAA+AGG - chr8_2:54351281-54351300 Msa1255540:CDS 30.0%
CTGATCTGTAGTTAACTAAA+GGG - chr8_2:54351282-54351301 Msa1255540:CDS 30.0%
!! TCTTTACTTTAAAGTGAGGT+TGG - chr8_2:54351334-54351353 Msa1255540:CDS 30.0%
!!! ACAAGTGTTGATTTTCATGA+AGG - chr8_2:54351469-54351488 Msa1255540:CDS 30.0%
CAAAAGAAGAATTCAACTTC+CGG - chr8_2:54351506-54351525 Msa1255540:CDS 30.0%
TTATAAACATGGGTGATGTT+AGG - chr8_2:54351721-54351740 Msa1255540:CDS 30.0%
TATTGGAACATTCCTAATCT+TGG + chr8_2:54351772-54351791 None:intergenic 30.0%
!! GTTTTATTCAAAGGATTCTG+AGG + chr8_2:54351858-54351877 None:intergenic 30.0%
!!! GAAGGTTTGGTTTTATTCAA+AGG + chr8_2:54351867-54351886 None:intergenic 30.0%
GATGATCAACAATGTAGTAT+TGG - chr8_2:54351999-54352018 Msa1255540:CDS 30.0%
!! AATGTAGTATTGGTGTAGAA+AGG - chr8_2:54352009-54352028 Msa1255540:CDS 30.0%
!!! GATATGAAGGTGGTTTTATT+AGG - chr8_2:54352137-54352156 Msa1255540:CDS 30.0%
GATATGTCTTGTCTTCAAAT+CGG - chr8_2:54352251-54352270 Msa1255540:intron 30.0%
TCCCTTATGATAAATCTTTC+TGG - chr8_2:54352444-54352463 Msa1255540:intron 30.0%
GTTTGATCTTACATGTACTT+TGG - chr8_2:54352494-54352513 Msa1255540:intron 30.0%
GTATGTAACTAATGATGACA+CGG - chr8_2:54352984-54353003 Msa1255540:intron 30.0%
GTAACAACAGTTTCAATTCA+TGG + chr8_2:54353044-54353063 None:intergenic 30.0%
AATTTACAGATACGTTTGGA+AGG + chr8_2:54353093-54353112 None:intergenic 30.0%
GTCAAATAATGAGACCAATT+AGG + chr8_2:54353185-54353204 None:intergenic 30.0%
! CATGTGCATTTTCTACAAAT+GGG + chr8_2:54353344-54353363 None:intergenic 30.0%
! ACATGTGCATTTTCTACAAA+TGG + chr8_2:54353345-54353364 None:intergenic 30.0%
AAGAACCTCACATGATTTAT+TGG - chr8_2:54353397-54353416 Msa1255540:intron 30.0%
TAAAGATACATGCTACTGTA+TGG + chr8_2:54353786-54353805 None:intergenic 30.0%
! TAGGATTTGTGAAAGTTTTG+AGG - chr8_2:54353896-54353915 Msa1255540:CDS 30.0%
ATGTCTTGATTATTGCCATT+TGG - chr8_2:54353961-54353980 Msa1255540:CDS 30.0%
AGATGAAGAAGAAGAAAAAG+TGG - chr8_2:54354110-54354129 Msa1255540:CDS 30.0%
AAGAAATTCGTTTCAACACA+GGG + chr8_2:54354179-54354198 None:intergenic 30.0%
AAGAGCTATATGCTTTACTA+CGG + chr8_2:54354472-54354491 None:intergenic 30.0%
ATTTCCGGAAAACTATATGT+CGG - chr8_2:54354636-54354655 Msa1255540:five_prime_UTR 30.0%
! TCAAAAGCTCTTTGAAGATT+AGG + chr8_2:54354894-54354913 None:intergenic 30.0%
! TAATCTTCAAAGAGCTTTTG+AGG - chr8_2:54354893-54354912 Msa1255540:intron 30.0%
! TTACCTTGATTTTCGACATA+TGG + chr8_2:54354945-54354964 None:intergenic 30.0%
GCTACTATCTTCTTTACATT+AGG + chr8_2:54355261-54355280 None:intergenic 30.0%
CCGAAAAAGCAAAAAGAGAA+TGG + chr8_2:54351059-54351078 None:intergenic 35.0%
! TCATTGTTTTCAACACGGAA+AGG - chr8_2:54351132-54351151 Msa1255540:three_prime_UTR 35.0%
! CATTGTTTTCAACACGGAAA+GGG - chr8_2:54351133-54351152 Msa1255540:three_prime_UTR 35.0%
AATTCAACTTCCGGAAATAG+TGG - chr8_2:54351515-54351534 Msa1255540:CDS 35.0%
!! GTAACTTGTTTGGTTATGTC+TGG - chr8_2:54351627-54351646 Msa1255540:CDS 35.0%
AACTAGTGTTCAGAAAAAGC+CGG - chr8_2:54351914-54351933 Msa1255540:CDS 35.0%
TCAGAAATCACCAATCTAGA+TGG + chr8_2:54351981-54352000 None:intergenic 35.0%
!!! TGGTTTTATTAGGGAAGCAA+GGG - chr8_2:54352147-54352166 Msa1255540:CDS 35.0%
!! TGTTAAGTTGAGTGTGCATA+GGG - chr8_2:54352175-54352194 Msa1255540:CDS 35.0%
TGCAAAAATTTCGGAGCAAT+CGG - chr8_2:54352229-54352248 Msa1255540:intron 35.0%
TCGCATTCTTCGAATTCTTA+AGG - chr8_2:54352364-54352383 Msa1255540:intron 35.0%
CATGAAATAACTCAGCAGAA+AGG + chr8_2:54352423-54352442 None:intergenic 35.0%
AATGAATATGCAGTTGCTAG+TGG + chr8_2:54352585-54352604 None:intergenic 35.0%
TTCTGCAGTGAAATGAAAAC+TGG - chr8_2:54352717-54352736 Msa1255540:intron 35.0%
!!! ATGGATGCATATTTTTTGGG+AGG - chr8_2:54352778-54352797 Msa1255540:intron 35.0%
TGATAAAACAAACCTCGTGT+TGG - chr8_2:54352863-54352882 Msa1255540:intron 35.0%
CAGCAATTTACAGATACGTT+TGG + chr8_2:54353097-54353116 None:intergenic 35.0%
AACGTATCTGTAAATTGCTG+AGG - chr8_2:54353097-54353116 Msa1255540:intron 35.0%
ATAGTGCCTTCAATCCTAAT+TGG - chr8_2:54353168-54353187 Msa1255540:intron 35.0%
ATGAGACCAATTAGGATTGA+AGG + chr8_2:54353177-54353196 None:intergenic 35.0%
GGAGGAAAGATCTAAATAGT+AGG + chr8_2:54353271-54353290 None:intergenic 35.0%
TAATGGTACCTCCATCTTTA+GGG + chr8_2:54353370-54353389 None:intergenic 35.0%
! TGAGGTTCTTACTAGTCTAA+TGG + chr8_2:54353387-54353406 None:intergenic 35.0%
CATTCTTCTTAGCAAAACCA+AGG - chr8_2:54353436-54353455 Msa1255540:intron 35.0%
ATTATCAAGCGCATAAACAC+AGG - chr8_2:54353509-54353528 Msa1255540:intron 35.0%
AGTGACAGATTAAACTGAGA+TGG + chr8_2:54353691-54353710 None:intergenic 35.0%
!! ATGATCTGCTGCTTTATTCT+AGG - chr8_2:54353877-54353896 Msa1255540:intron 35.0%
GAAGAAATTCGTTTCAACAC+AGG + chr8_2:54354180-54354199 None:intergenic 35.0%
GAGAACAAGTTCGATAATGT+GGG + chr8_2:54354235-54354254 None:intergenic 35.0%
TGAGAACAAGTTCGATAATG+TGG + chr8_2:54354236-54354255 None:intergenic 35.0%
AATCATGTCATTACAGCTGT+CGG + chr8_2:54354352-54354371 None:intergenic 35.0%
AAATATCAAGCAACCACGAA+AGG + chr8_2:54354506-54354525 None:intergenic 35.0%
! AATGCCGACATATAGTTTTC+CGG + chr8_2:54354643-54354662 None:intergenic 35.0%
! GGCAATTGTTATTGCAAACA+TGG - chr8_2:54354697-54354716 Msa1255540:five_prime_UTR 35.0%
CAATTGTAGTCACTCATTAG+AGG + chr8_2:54354729-54354748 None:intergenic 35.0%
CTCTAATGAGTGACTACAAT+TGG - chr8_2:54354727-54354746 Msa1255540:five_prime_UTR 35.0%
GACTACAATTGGTTACAACA+TGG - chr8_2:54354738-54354757 Msa1255540:five_prime_UTR 35.0%
!! GTTTGATAGGAAACTTGTTG+AGG - chr8_2:54354770-54354789 Msa1255540:five_prime_UTR 35.0%
!! AAACTTGTTGAGGAAGGAAT+TGG - chr8_2:54354780-54354799 Msa1255540:five_prime_UTR 35.0%
!! AACTTGTTGAGGAAGGAATT+GGG - chr8_2:54354781-54354800 Msa1255540:five_prime_UTR 35.0%
ATACTTTGTTGATCCTCCAA+AGG + chr8_2:54354825-54354844 None:intergenic 35.0%
! AGTATTTTGCTTTCTTGGGT+TGG - chr8_2:54354840-54354859 Msa1255540:intron 35.0%
GTTGGAAGTTTCTTGAAAAC+TGG - chr8_2:54354858-54354877 Msa1255540:intron 35.0%
!! GTAATTGCATGAGTTGATTG+TGG - chr8_2:54355134-54355153 Msa1255540:five_prime_UTR 35.0%
GTATAATCTCTTCAAAGGAG+TGG - chr8_2:54355209-54355228 Msa1255540:five_prime_UTR 35.0%
! TTCCTTTGTTGACCCTTTTG+AGG - chr8_2:54351375-54351394 Msa1255540:CDS 40.0%
TTCCTCAAAAGGGTCAACAA+AGG + chr8_2:54351380-54351399 None:intergenic 40.0%
TGGGTGATGTTAGGCTTAAT+AGG - chr8_2:54351730-54351749 Msa1255540:CDS 40.0%
GGGTGATGTTAGGCTTAATA+GGG - chr8_2:54351731-54351750 Msa1255540:CDS 40.0%
TGATGTTAGGCTTAATAGGG+TGG - chr8_2:54351734-54351753 Msa1255540:CDS 40.0%
ATCAAGGACAAGCCAAGATT+AGG - chr8_2:54351757-54351776 Msa1255540:CDS 40.0%
!! TTCTGAAACACAACAGGTGA+AGG + chr8_2:54351825-54351844 None:intergenic 40.0%
!!! TGGCTTTTCTGAAACACAAC+AGG + chr8_2:54351831-54351850 None:intergenic 40.0%
!! TCAAAGGATTCTGAGGCTTA+TGG + chr8_2:54351851-54351870 None:intergenic 40.0%
!!! TGAACACTAGTTTTCGGTTG+CGG + chr8_2:54351906-54351925 None:intergenic 40.0%
! CTCGGCATGGTTTCAATTTT+CGG + chr8_2:54352080-54352099 None:intergenic 40.0%
AATTGAAACCATGCCGAGAA+AGG - chr8_2:54352082-54352101 Msa1255540:CDS 40.0%
ACCTGGAACTTGTGATATGA+AGG - chr8_2:54352124-54352143 Msa1255540:CDS 40.0%
ACCTTCATATCACAAGTTCC+AGG + chr8_2:54352128-54352147 None:intergenic 40.0%
TGGAACTTGTGATATGAAGG+TGG - chr8_2:54352127-54352146 Msa1255540:CDS 40.0%
!!! GTGGTTTTATTAGGGAAGCA+AGG - chr8_2:54352146-54352165 Msa1255540:CDS 40.0%
!! CTGTTAAGTTGAGTGTGCAT+AGG - chr8_2:54352174-54352193 Msa1255540:CDS 40.0%
!! TGTTGGTTTGATGTACTGCA+AGG - chr8_2:54352307-54352326 Msa1255540:intron 40.0%
ACTGCAAGGAAATGAAACAG+CGG - chr8_2:54352321-54352340 Msa1255540:intron 40.0%
TGTAACTAATGATGACACGG+AGG - chr8_2:54352987-54353006 Msa1255540:intron 40.0%
GTAACTAATGATGACACGGA+GGG - chr8_2:54352988-54353007 Msa1255540:intron 40.0%
CTAATGGTACCTCCATCTTT+AGG + chr8_2:54353371-54353390 None:intergenic 40.0%
GAACGCCAATAAATCATGTG+AGG + chr8_2:54353405-54353424 None:intergenic 40.0%
! CGCATAAACACAGGTCTTAT+TGG - chr8_2:54353518-54353537 Msa1255540:intron 40.0%
TGCTACTGTATGGCATTTCA+TGG + chr8_2:54353776-54353795 None:intergenic 40.0%
CCAAATACTCCAAGCAAGAT+TGG + chr8_2:54354071-54354090 None:intergenic 40.0%
! CCAATCTTGCTTGGAGTATT+TGG - chr8_2:54354068-54354087 Msa1255540:CDS 40.0%
! ATCTTGCTTGGAGTATTTGG+AGG - chr8_2:54354071-54354090 Msa1255540:CDS 40.0%
TCAACTGTACTACAACTCCA+AGG - chr8_2:54354135-54354154 Msa1255540:CDS 40.0%
CAACTGTACTACAACTCCAA+GGG - chr8_2:54354136-54354155 Msa1255540:CDS 40.0%
AACTGTACTACAACTCCAAG+GGG - chr8_2:54354137-54354156 Msa1255540:CDS 40.0%
!!! AAGTGTGTCTTTTGGGACAT+TGG + chr8_2:54354211-54354230 None:intergenic 40.0%
!! TGTGGGAAAGTGTGTCTTTT+GGG + chr8_2:54354218-54354237 None:intergenic 40.0%
!! ATGTGGGAAAGTGTGTCTTT+TGG + chr8_2:54354219-54354238 None:intergenic 40.0%
!! GAACTATCGATTTCATCTCC+CGG + chr8_2:54354281-54354300 None:intergenic 40.0%
GAAGACTATTGTTCTCTCTG+AGG + chr8_2:54354311-54354330 None:intergenic 40.0%
CTTGGTTTATCTGCAAAGGT+TGG + chr8_2:54354435-54354454 None:intergenic 40.0%
TTGAAGCTGATAACCTTTCG+TGG - chr8_2:54354490-54354509 Msa1255540:CDS 40.0%
TGACGAGTTTGCGCTATTAT+GGG - chr8_2:54354545-54354564 Msa1255540:five_prime_UTR 40.0%
AAATGCAGCTGACGTGATAA+CGG + chr8_2:54354620-54354639 None:intergenic 40.0%
GGAAAACTATATGTCGGCAT+TGG - chr8_2:54354642-54354661 Msa1255540:five_prime_UTR 40.0%
!! TATATGTCGGCATTGGTAGA+GGG - chr8_2:54354649-54354668 Msa1255540:five_prime_UTR 40.0%
ATTGGTTACAACATGGATGC+AGG - chr8_2:54354745-54354764 Msa1255540:five_prime_UTR 40.0%
!! GATAGGAAACTTGTTGAGGA+AGG - chr8_2:54354774-54354793 Msa1255540:five_prime_UTR 40.0%
!!! TTCAAAGAGCTTTTGAGGTC+TGG - chr8_2:54354898-54354917 Msa1255540:intron 40.0%
AGGCCATATGTCGAAAATCA+AGG - chr8_2:54354939-54354958 Msa1255540:intron 40.0%
TAGTTCGACGATGTCAAAGA+AGG - chr8_2:54354977-54354996 Msa1255540:intron 40.0%
! TTTTTGTCAGCTGCTGGAAA+AGG + chr8_2:54355090-54355109 None:intergenic 40.0%
! CTAAACTTTTTGTCAGCTGC+TGG + chr8_2:54355096-54355115 None:intergenic 40.0%
AGTTGATTGTGGATTCAGTG+TGG - chr8_2:54355145-54355164 Msa1255540:five_prime_UTR 40.0%
ATCTCTTCAAAGGAGTGGAA+TGG - chr8_2:54355214-54355233 Msa1255540:five_prime_UTR 40.0%
AGGCTTAATAGGGTGGATCA+AGG - chr8_2:54351741-54351760 Msa1255540:CDS 45.0%
CAATAGCTGTTACCCCTGAA+GGG - chr8_2:54351787-54351806 Msa1255540:CDS 45.0%
ACAACACCAAAACCCTTCAG+GGG + chr8_2:54351802-54351821 None:intergenic 45.0%
GACAACACCAAAACCCTTCA+GGG + chr8_2:54351803-54351822 None:intergenic 45.0%
! TGGTGGTGATGAAGAAGGTT+TGG + chr8_2:54351880-54351899 None:intergenic 45.0%
ATCACCAATCTAGATGGTGC+AGG + chr8_2:54351975-54351994 None:intergenic 45.0%
GGTGTAGAAAGGTCTTTAGC+CGG - chr8_2:54352020-54352039 Msa1255540:CDS 45.0%
CTCAGCAGCTAAAGATGTTC+CGG + chr8_2:54352042-54352061 None:intergenic 45.0%
AACTCAATGGCCACCTTTCT+CGG + chr8_2:54352098-54352117 None:intergenic 45.0%
AGAAAGGTGGCCATTGAGTT+TGG - chr8_2:54352098-54352117 Msa1255540:CDS 45.0%
TCCAGGTTCACCAAACTCAA+TGG + chr8_2:54352111-54352130 None:intergenic 45.0%
TCTTCAAATCGGCGATTGTG+AGG - chr8_2:54352262-54352281 Msa1255540:intron 45.0%
CCAATTGAGTATCCAACACG+AGG + chr8_2:54352878-54352897 None:intergenic 45.0%
CCTCGTGTTGGATACTCAAT+TGG - chr8_2:54352875-54352894 Msa1255540:intron 45.0%
TGCACATGTGTCCCTAAAGA+TGG - chr8_2:54353356-54353375 Msa1255540:intron 45.0%
ACATGTGTCCCTAAAGATGG+AGG - chr8_2:54353359-54353378 Msa1255540:intron 45.0%
!! GAAAAGTGTCCTGCAGATTC+AGG + chr8_2:54353618-54353637 None:intergenic 45.0%
CTTCTTCATCTCCAACCCAT+GGG + chr8_2:54354101-54354120 None:intergenic 45.0%
TCTTCTTCATCTCCAACCCA+TGG + chr8_2:54354102-54354121 None:intergenic 45.0%
ACTTGTTCTCAAGAGCAACG+AGG - chr8_2:54354245-54354264 Msa1255540:CDS 45.0%
CTCAAGAGCAACGAGGAAAA+AGG - chr8_2:54354252-54354271 Msa1255540:CDS 45.0%
GTTACTGTCTCTCTTCAAGC+AGG - chr8_2:54354401-54354420 Msa1255540:CDS 45.0%
GTCGCTTGGTTTATCTGCAA+AGG + chr8_2:54354439-54354458 None:intergenic 45.0%
TAATAGCGCAAACTCGTCAG+CGG + chr8_2:54354544-54354563 None:intergenic 45.0%
CTGACGAGTTTGCGCTATTA+TGG - chr8_2:54354544-54354563 Msa1255540:five_prime_UTR 45.0%
!! ACGTGATAACGGGACACAAT+CGG + chr8_2:54354609-54354628 None:intergenic 45.0%
AATGCAGCTGACGTGATAAC+GGG + chr8_2:54354619-54354638 None:intergenic 45.0%
TATCACGTCAGCTGCATTTC+CGG - chr8_2:54354621-54354640 Msa1255540:five_prime_UTR 45.0%
!! CTATATGTCGGCATTGGTAG+AGG - chr8_2:54354648-54354667 Msa1255540:five_prime_UTR 45.0%
!! ATATGTCGGCATTGGTAGAG+GGG - chr8_2:54354650-54354669 Msa1255540:five_prime_UTR 45.0%
TGTTGCCATTGAAAGACACG+CGG - chr8_2:54354676-54354695 Msa1255540:five_prime_UTR 45.0%
AATTGCCGCGTGTCTTTCAA+TGG + chr8_2:54354684-54354703 None:intergenic 45.0%
ATGGATGCAGGTCGTTTGAT+AGG - chr8_2:54354757-54354776 Msa1255540:five_prime_UTR 45.0%
TTGTTGAGGAAGGAATTGGG+AGG - chr8_2:54354784-54354803 Msa1255540:five_prime_UTR 45.0%
TTGTTGATCCTCCAAAGGCA+AGG + chr8_2:54354820-54354839 None:intergenic 45.0%
!!! AAAGAGCTTTTGAGGTCTGG+TGG - chr8_2:54354901-54354920 Msa1255540:intron 45.0%
CATCGTCGAACTATCTGACA+CGG + chr8_2:54354970-54354989 None:intergenic 45.0%
CCTTCAGGGGTAACAGCTAT+TGG + chr8_2:54351789-54351808 None:intergenic 50.0%
CCAATAGCTGTTACCCCTGA+AGG - chr8_2:54351786-54351805 Msa1255540:CDS 50.0%
! CTGTTACCCCTGAAGGGTTT+TGG - chr8_2:54351793-54351812 Msa1255540:CDS 50.0%
GGACAACACCAAAACCCTTC+AGG + chr8_2:54351804-54351823 None:intergenic 50.0%
! GGTTGTGGTGGTGATGAAGA+AGG + chr8_2:54351885-54351904 None:intergenic 50.0%
!! CTAGTTTTCGGTTGCGGTTG+TGG + chr8_2:54351900-54351919 None:intergenic 50.0%
TGCACCTGCACCATCTAGAT+TGG - chr8_2:54351968-54351987 Msa1255540:CDS 50.0%
TGAAACCATGCCGAGAAAGG+TGG - chr8_2:54352085-54352104 Msa1255540:CDS 50.0%
! GCCATTGAGTTTGGTGAACC+TGG - chr8_2:54352107-54352126 Msa1255540:CDS 50.0%
! GGAGGGTACAACACTTGCAT+TGG - chr8_2:54353005-54353024 Msa1255540:intron 50.0%
AGTGTCCTGCAGATTCAGGA+GGG + chr8_2:54353614-54353633 None:intergenic 50.0%
AAGTGTCCTGCAGATTCAGG+AGG + chr8_2:54353615-54353634 None:intergenic 50.0%
CCAAGGAATTCTGCAACCTG+AGG + chr8_2:54354033-54354052 None:intergenic 50.0%
! CCTCAGGTTGCAGAATTCCT+TGG - chr8_2:54354030-54354049 Msa1255540:CDS 50.0%
CTCCTGTGTCCAATCTTGCT+TGG - chr8_2:54354059-54354078 Msa1255540:CDS 50.0%
CTCCAAGCAAGATTGGACAC+AGG + chr8_2:54354064-54354083 None:intergenic 50.0%
AGTATTTGGAGGCTGTCCCA+TGG - chr8_2:54354082-54354101 Msa1255540:CDS 50.0%
GTATTTGGAGGCTGTCCCAT+GGG - chr8_2:54354083-54354102 Msa1255540:CDS 50.0%
GTACTACAACTCCAAGGGGA+AGG - chr8_2:54354141-54354160 Msa1255540:CDS 50.0%
CAACTCCAAGGGGAAGGAAT+TGG - chr8_2:54354147-54354166 Msa1255540:CDS 50.0%
TGACTCCAATTCCTTCCCCT+TGG + chr8_2:54354155-54354174 None:intergenic 50.0%
CATGTCATTACAGCTGTCGG+TGG + chr8_2:54354349-54354368 None:intergenic 50.0%
ACGGAATCTCTTTCGTCGCT+TGG + chr8_2:54354453-54354472 None:intergenic 50.0%
GCTATTATGGGCAAACCAGC+AGG - chr8_2:54354557-54354576 Msa1255540:five_prime_UTR 50.0%
GTAAGACAGCTAACTCCTGC+TGG + chr8_2:54354575-54354594 None:intergenic 50.0%
GACGATTCTCACCTTGCCTT+TGG - chr8_2:54354806-54354825 Msa1255540:five_prime_UTR 50.0%
GATTCTCACCTTGCCTTTGG+AGG - chr8_2:54354809-54354828 Msa1255540:five_prime_UTR 50.0%
GGTGGCGCAGAACATTCATT+AGG - chr8_2:54354919-54354938 Msa1255540:intron 50.0%
! GTTTTCGGTTGCGGTTGTGG+TGG + chr8_2:54351897-54351916 None:intergenic 55.0%
GAAAAAGCCGGTTGCAGTGC+AGG - chr8_2:54351926-54351945 Msa1255540:CDS 55.0%
TCAGTCACCTGCACTGCAAC+CGG + chr8_2:54351936-54351955 None:intergenic 55.0%
GTGCAGGTGACTGAGAGAAG+AGG - chr8_2:54351942-54351961 Msa1255540:CDS 55.0%
AATGGCCACCTTTCTCGGCA+TGG + chr8_2:54352093-54352112 None:intergenic 55.0%
GCAACGAGGAAAAAGGTCGC+CGG - chr8_2:54354259-54354278 Msa1255540:CDS 55.0%
CAACGAGGAAAAAGGTCGCC+GGG - chr8_2:54354260-54354279 Msa1255540:CDS 55.0%
TCGGTGGAACGTGCGTAACT+TGG + chr8_2:54354333-54354352 None:intergenic 55.0%
GGTGTCCCTCCTGAATCTGC+AGG - chr8_2:54353606-54353625 Msa1255540:intron 60.0%
GGACACAGGAGCTGAAGCCA+AGG + chr8_2:54354050-54354069 None:intergenic 60.0%
TTGGAGGCTGTCCCATGGGT+TGG - chr8_2:54354087-54354106 Msa1255540:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 54350979 54355291 54350979 ID=Msa1255540;Name=Msa1255540
chr8_2 mRNA 54350979 54355291 54350979 ID=Msa1255540-mRNA-1;Parent=Msa1255540;Name=Msa1255540-mRNA-1;_AED=0.01;_eAED=0.01;_QI=490|1|1|1|0.5|0.33|3|284|542
chr8_2 exon 54350979 54352234 54350979 ID=Msa1255540-mRNA-1:exon:16816;Parent=Msa1255540-mRNA-1
chr8_2 exon 54353885 54354832 54353885 ID=Msa1255540-mRNA-1:exon:16815;Parent=Msa1255540-mRNA-1
chr8_2 exon 54355093 54355291 54355093 ID=Msa1255540-mRNA-1:exon:16814;Parent=Msa1255540-mRNA-1
chr8_2 five_prime_UTR 54355093 54355291 54355093 ID=Msa1255540-mRNA-1:five_prime_utr;Parent=Msa1255540-mRNA-1
chr8_2 five_prime_UTR 54354542 54354832 54354542 ID=Msa1255540-mRNA-1:five_prime_utr;Parent=Msa1255540-mRNA-1
chr8_2 CDS 54353885 54354541 54353885 ID=Msa1255540-mRNA-1:cds;Parent=Msa1255540-mRNA-1
chr8_2 CDS 54351263 54352234 54351263 ID=Msa1255540-mRNA-1:cds;Parent=Msa1255540-mRNA-1
chr8_2 three_prime_UTR 54350979 54351262 54350979 ID=Msa1255540-mRNA-1:three_prime_utr;Parent=Msa1255540-mRNA-1
Gene Sequence

>Msa1255540

ATGGGTGATGTTAGGCTTAATAGGGTGGATCAAGGACAAGCCAAGATTAGGAATGTTCCAATAGCTGTTACCCCTGAAGGGTTTTGGTGTTGTCCTTCACCTGTTGTGTTTCAGAAAAGCCATAAGCCTCAGAATCCTTTGAATAAAACCAAACCTTCTTCATCACCACCACAACCGCAACCGAAAACTAGTGTTCAGAAAAAGCCGGTTGCAGTGCAGGTGACTGAGAGAAGAGGTTCTGCACCTGCACCATCTAGATTGGTGATTTCTGATGATCAACAATGTAGTATTGGTGTAGAAAGGTCTTTAGCCGGAACATCTTTAGCTGCTGAGAGAGTATCTTCTAGACCGAAAATTGAAACCATGCCGAGAAAGGTGGCCATTGAGTTTGGTGAACCTGGAACTTGTGATATGAAGGTGGTTTTATTAGGGAAGCAAGGGTTTTCTGTTAAGTTGAGTGTGCATAGGGATGTTCTGACAGAGAAGAGTAGTTTCTTTTCTGCAAAAATTTCGGAGCAATCGGATATGTCTTGTCTTCAAATCGGCGATTGTGAGGATGTTGAAATATATGTTGAAACTGTTGGTTTGATGTACTGCAAGGAAATGAAACAGCGGCTTATGAAACAGAATGTTTCTCGCATTCTTCGAATTCTTAAGGTTGCAGAATTCCTTGGCTTCAGCTCCTGTGTCCAATCTTGCTTGGAGTATTTGGAGGCTGTCCCATGGGTTGGAGATGAAGAAGAAGAAAAAGTGGTCTCAACTGTACTACAACTCCAAGGGGAAGGAATTGGAGTCAACCCTGTGTTGAAACGAATTTCTTCTGACGTTTCCAATGTCCCAAAAGACACACTTTCCCACATTATCGAACTTGTTCTCAAGAGCAACGAGGAAAAAGGTCGCCGGGAGATGAAATCGATAGTTCTAAAGCTCCTCAGAGAGAACAATAGTCTTCCAAGTTACGCACGTTCCACCGACAGCTGTAATGACATGATTTATAGATCATGCAGAAGCTGCTTAGATTCGTTACTGTCTCTCTTCAAGCAGGCTGCAGAACCAACCTTTGCAGATAAACCAAGCGACGAAAGAGATTCCGTAGTAAAGCATATAGCTCTTGAAGCTGATAACCTTTCGTGGTTGCTTGATATTTTAGTTGACAAACAAGCCGCTGACGAGTTTGCGCTATTATGGGCAAACCAGCAGGAGTTAGCTGTCTTACATGCAAAGCTGCCGATTGTGTCCCGTTATCACGTCAGCTGCATTTCCGGAAAACTATATGTCGGCATTGGTAGAGGGGAGTTGTTGCCATTGAAAGACACGCGGCAATTGTTATTGCAAACATGGCTGCAGCCTCTAATGAGTGACTACAATTGGTTACAACATGGATGCAGGTCGTTTGATAGGAAACTTGTTGAGGAAGGAATTGGGAGGACGATTCTCACCTTGCCTTTGGAGGATCAACAAAGTATTTTGCTTTCTTGGGTTGGAAGTTTCTTGAAAACTGGAGATAGCTGTCCTAATCTTCAAAGAGCTTTTGAGGTCTGGTGGCGCAGAACATTCATTAGGCCATATGTCGAAAATCAAGGTAATGCCGTGTCAGATAGTTCGACGATGTCAAAGAAGGACGAATGA
Protein sequence

>Msa1255540

MGDVRLNRVDQGQAKIRNVPIAVTPEGFWCCPSPVVFQKSHKPQNPLNKTKPSSSPPQPQPKTSVQKKPVAVQVTERRGSAPAPSRLVISDDQQCSIGVERSLAGTSLAAERVSSRPKIETMPRKVAIEFGEPGTCDMKVVLLGKQGFSVKLSVHRDVLTEKSSFFSAKISEQSDMSCLQIGDCEDVEIYVETVGLMYCKEMKQRLMKQNVSRILRILKVAEFLGFSSCVQSCLEYLEAVPWVGDEEEEKVVSTVLQLQGEGIGVNPVLKRISSDVSNVPKDTLSHIIELVLKSNEEKGRREMKSIVLKLLRENNSLPSYARSTDSCNDMIYRSCRSCLDSLLSLFKQAAEPTFADKPSDERDSVVKHIALEADNLSWLLDILVDKQAADEFALLWANQQELAVLHAKLPIVSRYHVSCISGKLYVGIGRGELLPLKDTRQLLLQTWLQPLMSDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWVGSFLKTGDSCPNLQRAFEVWWRRTFIRPYVENQGNAVSDSSTMSKKDE*