Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1255630 | XP_013446428.1 | 97.125 | 626 | 18 | 0 | 1 | 626 | 1 | 626 | 0.0 | 1269 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1255630 | G7ZYV9 | 97.125 | 626 | 18 | 0 | 1 | 626 | 1 | 626 | 0.0 | 1269 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0563940 | Msa1255630 | 0.803186 | 3.930334e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1255630 | MtrunA17_Chr8g0373901 | 97.125 | 626 | 18 | 0 | 1 | 626 | 1 | 626 | 0.0 | 1269 |
Msa1255630 | MtrunA17_Chr5g0403231 | 67.778 | 630 | 178 | 12 | 5 | 626 | 12 | 624 | 0.0 | 805 |
Msa1255630 | MtrunA17_Chr4g0034351 | 41.680 | 643 | 307 | 15 | 11 | 625 | 15 | 617 | 5.15e-145 | 434 |
Msa1255630 | MtrunA17_Chr5g0399331 | 29.094 | 574 | 330 | 12 | 61 | 625 | 75 | 580 | 3.14e-67 | 230 |
Msa1255630 | MtrunA17_Chr8g0374741 | 28.381 | 451 | 284 | 7 | 177 | 620 | 177 | 595 | 1.45e-40 | 156 |
Msa1255630 | MtrunA17_Chr5g0435281 | 30.372 | 349 | 212 | 8 | 296 | 624 | 176 | 513 | 4.46e-39 | 150 |
Msa1255630 | MtrunA17_Chr5g0402501 | 29.940 | 334 | 193 | 7 | 294 | 620 | 245 | 544 | 4.89e-38 | 148 |
Msa1255630 | MtrunA17_Chr1g0153951 | 31.722 | 331 | 196 | 8 | 299 | 620 | 236 | 545 | 1.31e-36 | 144 |
Msa1255630 | MtrunA17_Chr4g0028651 | 30.312 | 353 | 201 | 10 | 299 | 620 | 355 | 693 | 2.75e-36 | 144 |
Msa1255630 | MtrunA17_Chr3g0133631 | 30.678 | 339 | 190 | 8 | 296 | 620 | 261 | 568 | 2.11e-35 | 140 |
Msa1255630 | MtrunA17_Chr3g0115381 | 29.870 | 231 | 150 | 4 | 391 | 618 | 536 | 757 | 1.37e-22 | 102 |
Msa1255630 | MtrunA17_Chr8g0351061 | 32.778 | 180 | 110 | 3 | 398 | 574 | 408 | 579 | 3.17e-21 | 98.2 |
Msa1255630 | MtrunA17_Chr1g0163291 | 32.222 | 180 | 110 | 4 | 398 | 574 | 386 | 556 | 6.99e-17 | 84.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1255630 | AT5G66600.14 | 56.190 | 630 | 231 | 15 | 10 | 626 | 17 | 614 | 0.0 | 632 |
Msa1255630 | AT5G66600.1 | 56.190 | 630 | 231 | 15 | 10 | 626 | 17 | 614 | 0.0 | 632 |
Msa1255630 | AT5G66600.4 | 56.190 | 630 | 231 | 15 | 10 | 626 | 17 | 614 | 0.0 | 632 |
Msa1255630 | AT5G66600.9 | 56.190 | 630 | 231 | 15 | 10 | 626 | 17 | 614 | 0.0 | 632 |
Msa1255630 | AT5G66600.3 | 56.190 | 630 | 231 | 15 | 10 | 626 | 17 | 614 | 0.0 | 632 |
Msa1255630 | AT5G66600.2 | 56.522 | 621 | 227 | 14 | 17 | 626 | 6 | 594 | 0.0 | 629 |
Msa1255630 | AT5G66600.7 | 58.261 | 575 | 203 | 12 | 61 | 626 | 14 | 560 | 0.0 | 615 |
Msa1255630 | AT5G66600.12 | 55.009 | 529 | 197 | 13 | 10 | 528 | 17 | 514 | 4.31e-175 | 508 |
Msa1255630 | AT5G66600.11 | 55.009 | 529 | 197 | 13 | 10 | 528 | 17 | 514 | 4.31e-175 | 508 |
Msa1255630 | AT5G66600.6 | 55.009 | 529 | 197 | 13 | 10 | 528 | 17 | 514 | 4.31e-175 | 508 |
Msa1255630 | AT5G66600.13 | 55.009 | 529 | 197 | 13 | 10 | 528 | 17 | 514 | 4.31e-175 | 508 |
Msa1255630 | AT2G23700.1 | 54.324 | 451 | 178 | 9 | 181 | 626 | 280 | 707 | 5.62e-151 | 452 |
Msa1255630 | AT2G23700.1 | 46.927 | 179 | 83 | 6 | 5 | 175 | 1 | 175 | 8.01e-28 | 119 |
Msa1255630 | AT5G66600.10 | 52.965 | 489 | 190 | 12 | 10 | 488 | 17 | 475 | 1.48e-150 | 444 |
Msa1255630 | AT5G66600.8 | 52.965 | 489 | 190 | 12 | 10 | 488 | 17 | 475 | 1.48e-150 | 444 |
Msa1255630 | AT5G66600.5 | 52.965 | 489 | 190 | 12 | 10 | 488 | 17 | 475 | 1.48e-150 | 444 |
Msa1255630 | AT5G66600.15 | 55.300 | 434 | 162 | 9 | 61 | 488 | 14 | 421 | 1.51e-144 | 427 |
Msa1255630 | AT3G18900.4 | 38.869 | 548 | 239 | 12 | 79 | 620 | 73 | 530 | 9.65e-107 | 333 |
Msa1255630 | AT3G18900.5 | 38.869 | 548 | 239 | 12 | 79 | 620 | 68 | 525 | 1.07e-106 | 332 |
Msa1255630 | AT3G18900.6 | 39.464 | 522 | 221 | 12 | 104 | 620 | 18 | 449 | 6.47e-106 | 328 |
Msa1255630 | AT3G18900.3 | 39.464 | 522 | 221 | 12 | 104 | 620 | 18 | 449 | 6.47e-106 | 328 |
Msa1255630 | AT3G18900.1 | 37.225 | 454 | 191 | 11 | 79 | 528 | 73 | 436 | 2.25e-72 | 241 |
Msa1255630 | AT1G76620.1 | 38.278 | 418 | 219 | 12 | 233 | 625 | 118 | 521 | 3.99e-72 | 242 |
Msa1255630 | AT1G21060.2 | 38.567 | 363 | 201 | 6 | 262 | 623 | 153 | 494 | 4.45e-66 | 225 |
Msa1255630 | AT1G21060.1 | 39.244 | 344 | 189 | 5 | 281 | 623 | 182 | 506 | 5.76e-66 | 225 |
Msa1255630 | AT5G47380.5 | 33.238 | 349 | 191 | 4 | 292 | 626 | 216 | 536 | 7.11e-65 | 223 |
Msa1255630 | AT5G47380.1 | 33.238 | 349 | 191 | 4 | 292 | 626 | 272 | 592 | 4.22e-64 | 223 |
Msa1255630 | AT1G43020.1 | 36.599 | 347 | 173 | 5 | 281 | 626 | 140 | 440 | 4.88e-64 | 218 |
Msa1255630 | AT5G47380.4 | 33.238 | 349 | 191 | 4 | 292 | 626 | 272 | 592 | 6.83e-64 | 221 |
Msa1255630 | AT3G18900.2 | 34.719 | 409 | 173 | 11 | 79 | 483 | 73 | 391 | 1.20e-52 | 186 |
Msa1255630 | AT5G47380.2 | 30.120 | 498 | 256 | 13 | 47 | 531 | 73 | 491 | 2.06e-50 | 182 |
Msa1255630 | AT3G13000.1 | 33.523 | 352 | 200 | 8 | 299 | 620 | 198 | 545 | 5.51e-48 | 177 |
Msa1255630 | AT3G13000.3 | 33.523 | 352 | 200 | 8 | 299 | 620 | 227 | 574 | 1.52e-47 | 176 |
Msa1255630 | AT3G13000.2 | 33.523 | 352 | 200 | 8 | 299 | 620 | 227 | 574 | 1.52e-47 | 176 |
Msa1255630 | AT1G16750.1 | 32.033 | 359 | 204 | 10 | 296 | 620 | 175 | 527 | 7.00e-45 | 167 |
Msa1255630 | AT5G47380.3 | 34.979 | 243 | 122 | 3 | 292 | 526 | 272 | 486 | 9.21e-41 | 155 |
Msa1255630 | AT1G76620.2 | 35.625 | 320 | 168 | 11 | 233 | 528 | 118 | 423 | 2.33e-40 | 153 |
Msa1255630 | AT5G42690.3 | 32.628 | 331 | 184 | 10 | 299 | 620 | 186 | 486 | 5.99e-39 | 150 |
Msa1255630 | AT5G42690.5 | 32.628 | 331 | 184 | 10 | 299 | 620 | 211 | 511 | 7.85e-39 | 150 |
Msa1255630 | AT5G42690.2 | 32.628 | 331 | 184 | 10 | 299 | 620 | 238 | 538 | 8.78e-39 | 150 |
Msa1255630 | AT5G42690.4 | 32.628 | 331 | 184 | 10 | 299 | 620 | 238 | 538 | 8.78e-39 | 150 |
Msa1255630 | AT5G42690.1 | 32.628 | 331 | 184 | 10 | 299 | 620 | 237 | 537 | 9.83e-39 | 150 |
Msa1255630 | AT1G43020.3 | 35.547 | 256 | 118 | 5 | 281 | 536 | 140 | 348 | 2.75e-38 | 145 |
Msa1255630 | AT4G37080.2 | 30.473 | 338 | 171 | 7 | 298 | 620 | 320 | 608 | 1.57e-37 | 148 |
Msa1255630 | AT4G37080.3 | 30.473 | 338 | 171 | 7 | 298 | 620 | 320 | 608 | 1.57e-37 | 148 |
Msa1255630 | AT4G37080.1 | 30.473 | 338 | 171 | 7 | 298 | 620 | 307 | 595 | 2.02e-37 | 147 |
Msa1255630 | AT3G12540.2 | 29.111 | 371 | 231 | 10 | 265 | 620 | 150 | 503 | 8.12e-35 | 139 |
Msa1255630 | AT3G12540.1 | 29.032 | 372 | 230 | 11 | 265 | 620 | 217 | 570 | 1.64e-34 | 139 |
Msa1255630 | AT5G60720.1 | 29.692 | 357 | 208 | 11 | 299 | 620 | 341 | 689 | 8.20e-32 | 131 |
Msa1255630 | AT2G39690.8 | 28.869 | 336 | 208 | 8 | 299 | 620 | 178 | 496 | 6.78e-31 | 127 |
Msa1255630 | AT2G39690.1 | 28.869 | 336 | 208 | 8 | 299 | 620 | 204 | 522 | 9.42e-31 | 127 |
Msa1255630 | AT2G39690.2 | 28.869 | 336 | 209 | 8 | 299 | 620 | 97 | 416 | 1.31e-30 | 125 |
Msa1255630 | AT2G39690.4 | 28.994 | 338 | 206 | 9 | 299 | 620 | 178 | 497 | 1.81e-30 | 125 |
Msa1255630 | AT2G39690.5 | 28.994 | 338 | 206 | 9 | 299 | 620 | 204 | 523 | 2.76e-30 | 125 |
Msa1255630 | AT1G16750.2 | 32.159 | 227 | 125 | 7 | 296 | 498 | 175 | 396 | 2.39e-26 | 112 |
Msa1255630 | AT4G08550.1 | 28.571 | 224 | 148 | 5 | 394 | 614 | 419 | 633 | 3.94e-21 | 98.2 |
Msa1255630 | AT4G08550.2 | 28.571 | 224 | 148 | 5 | 394 | 614 | 473 | 687 | 5.27e-21 | 98.2 |
Msa1255630 | AT1G43020.4 | 32.804 | 189 | 76 | 4 | 281 | 463 | 140 | 283 | 4.21e-19 | 88.6 |
Msa1255630 | AT1G43020.5 | 32.804 | 189 | 76 | 4 | 281 | 463 | 140 | 283 | 6.99e-19 | 88.6 |
Msa1255630 | AT1G43020.2 | 32.804 | 189 | 76 | 4 | 281 | 463 | 140 | 283 | 6.99e-19 | 88.6 |
Msa1255630 | AT3G11920.1 | 33.540 | 161 | 97 | 4 | 415 | 572 | 430 | 583 | 2.30e-17 | 86.3 |
Msa1255630 | AT2G39690.7 | 29.004 | 231 | 152 | 5 | 299 | 528 | 204 | 423 | 3.43e-17 | 84.7 |
Msa1255630 | AT2G39690.6 | 28.755 | 233 | 151 | 6 | 299 | 528 | 204 | 424 | 9.87e-17 | 83.6 |
Msa1255630 | AT4G37080.4 | 28.631 | 241 | 113 | 6 | 298 | 528 | 320 | 511 | 6.86e-16 | 81.3 |
Msa1255630 | AT2G39690.3 | 29.775 | 178 | 121 | 3 | 299 | 475 | 178 | 352 | 5.87e-15 | 77.4 |
Find 152 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAGCTTATTAGCTGTTTC+TGG | 0.133513 | 8_2:-54432140 | None:intergenic |
AGAGTTAGAAGTTGTATATT+TGG | 0.184488 | 8_2:+54431450 | Msa1255630:CDS |
TCCTTCACTGTTTCCTTATC+AGG | 0.197617 | 8_2:-54430041 | None:intergenic |
ATAATAGTTGTTATGTTCTT+AGG | 0.218213 | 8_2:+54429446 | Msa1255630:exon |
GCTGCTACATATTTAAATAT+TGG | 0.250624 | 8_2:-54434147 | None:intergenic |
GATACATTCTCCAAAGATTC+AGG | 0.252803 | 8_2:+54433667 | Msa1255630:CDS |
GAGAATGTATCTACAATCTT+AGG | 0.257134 | 8_2:-54433655 | None:intergenic |
CTGGAATATGATCACATATT+CGG | 0.260667 | 8_2:-54432121 | None:intergenic |
AACAGTTGCTCCAGAATTTC+AGG | 0.263889 | 8_2:+54432441 | Msa1255630:CDS |
TGTACAATGTATTCTTTATC+TGG | 0.269728 | 8_2:-54431715 | None:intergenic |
CTTCACTTTGCACTTTGTTC+AGG | 0.277336 | 8_2:+54433288 | Msa1255630:CDS |
ACACTCTTTCTCAGGGATTC+AGG | 0.278846 | 8_2:-54433733 | None:intergenic |
TTGCTGTAGATGTTGAATAT+TGG | 0.297690 | 8_2:-54431795 | None:intergenic |
CTTGCTCTAGGTGTTGTTAC+AGG | 0.300352 | 8_2:-54431574 | None:intergenic |
AAGACTAGAAGACCAATTTA+AGG | 0.302009 | 8_2:+54430923 | Msa1255630:CDS |
TAATAAGCTTTCTGAGGATA+TGG | 0.308473 | 8_2:+54432151 | Msa1255630:CDS |
TGCTGTAGATGTTGAATATT+GGG | 0.327313 | 8_2:-54431794 | None:intergenic |
ATTTGGATTAACAAGAGATA+TGG | 0.335609 | 8_2:-54430982 | None:intergenic |
ATGAGTAAAACCTGAATCTT+TGG | 0.337457 | 8_2:-54433677 | None:intergenic |
GTTGTTGTTCAAATGCTTTA+CGG | 0.343548 | 8_2:-54431495 | None:intergenic |
ATTTCTTAACACTCTTTCTC+AGG | 0.352274 | 8_2:-54433741 | None:intergenic |
TACAGGCTGCATATAATGTT+GGG | 0.354407 | 8_2:+54432797 | Msa1255630:intron |
ATATGGCAGCTTTCCTGATA+AGG | 0.366194 | 8_2:+54430028 | Msa1255630:intron |
ACGAGGAGAAGTTAGCTTTC+TGG | 0.366850 | 8_2:+54432510 | Msa1255630:CDS |
AAGAGTCTTTCTTCTCTTGA+AGG | 0.368777 | 8_2:+54432688 | Msa1255630:CDS |
ACCTCAACCATGGTGCTATA+TGG | 0.372022 | 8_2:-54432377 | None:intergenic |
TTGTTGCACAGTGTCATTAG+TGG | 0.377201 | 8_2:+54429324 | Msa1255630:intron |
AAGAAATGTCATGCAAAATC+CGG | 0.384303 | 8_2:+54433757 | Msa1255630:CDS |
AATCCATTCTATGCTCTTCC+CGG | 0.388268 | 8_2:-54433776 | None:intergenic |
AAATAAGTGACCTGAAATTC+TGG | 0.390317 | 8_2:-54432451 | None:intergenic |
ACAATACAAAATACTATACT+AGG | 0.390880 | 8_2:+54432841 | Msa1255630:CDS |
GATAATCCTTTCAACGTTGA+AGG | 0.391580 | 8_2:+54432335 | Msa1255630:CDS |
AAGTGGAAAATAAACCAAAA+AGG | 0.393123 | 8_2:-54429115 | None:intergenic |
TCCTCGTGCTTCAACTTCCC+TGG | 0.394508 | 8_2:-54432494 | None:intergenic |
GAAAGGCCCGGATTAGTTAT+AGG | 0.396919 | 8_2:-54432215 | None:intergenic |
GGACAAGGGTTGAGAATAAC+AGG | 0.398493 | 8_2:-54431860 | None:intergenic |
TTGTCTACTGTAACAGATCC+TGG | 0.402270 | 8_2:+54434085 | Msa1255630:three_prime_UTR |
TATTCTTTATCTGGAGTCTC+AGG | 0.406473 | 8_2:-54431706 | None:intergenic |
TGGAATATGATCACATATTC+GGG | 0.406975 | 8_2:-54432120 | None:intergenic |
ATGTGCATCTGACCTTAAAT+TGG | 0.407316 | 8_2:-54430935 | None:intergenic |
AAAGGCACTTATCGAAGTAC+TGG | 0.408182 | 8_2:-54432243 | None:intergenic |
TGGGGTATAGTCGTGTCATT+TGG | 0.410088 | 8_2:-54430999 | None:intergenic |
AGTTCTTGAAACACTCTCTT+CGG | 0.410304 | 8_2:-54433565 | None:intergenic |
GTATGTCGAACATTATTCAT+AGG | 0.412449 | 8_2:-54430741 | None:intergenic |
CAATTAGAAGACGTAGATCC+AGG | 0.416290 | 8_2:+54432476 | Msa1255630:CDS |
TTCAAATGCTTTACGGTACA+AGG | 0.416852 | 8_2:-54431488 | None:intergenic |
CTTCTTCTCTCAAGTCACCT+TGG | 0.420588 | 8_2:+54429082 | Msa1255630:five_prime_UTR |
AATTATTTAACCAGCTCCTT+AGG | 0.423672 | 8_2:-54433829 | None:intergenic |
TTGAGGGTAGTGATAGAGTA+AGG | 0.428129 | 8_2:-54429157 | None:intergenic |
TTCTCAACCCTTGTCCATGA+TGG | 0.428216 | 8_2:+54431867 | Msa1255630:CDS |
CTCTTTGAACGATTATGCCT+TGG | 0.428577 | 8_2:-54429612 | None:intergenic |
CAAGGCGACACGTGGAGTCC+AGG | 0.433939 | 8_2:+54432278 | Msa1255630:CDS |
TTCTTTGAAGATAGTGAAGT+TGG | 0.447899 | 8_2:+54429043 | None:intergenic |
TACCCTCAACAAACCTCAAA+AGG | 0.450571 | 8_2:+54429171 | Msa1255630:five_prime_UTR |
TTCTTATTTATTCAGAAATG+AGG | 0.454104 | 8_2:-54429424 | None:intergenic |
TTTGGATTAACAAGAGATAT+GGG | 0.457433 | 8_2:-54430981 | None:intergenic |
GAGTACATTAGAGCCACGTT+TGG | 0.459510 | 8_2:+54433604 | Msa1255630:CDS |
AGACCCACCTATAACTAATC+CGG | 0.459828 | 8_2:+54432208 | Msa1255630:CDS |
TGAGATTCATACACTTCAAA+AGG | 0.460970 | 8_2:+54431666 | Msa1255630:CDS |
TCTTTGATTAATTCTGTGGT+TGG | 0.461028 | 8_2:-54431415 | None:intergenic |
GCAGTCAATCAAATGCCAAT+TGG | 0.462180 | 8_2:+54434226 | Msa1255630:three_prime_UTR |
CCGAATGTCTCGTCCTGGAC+AGG | 0.462864 | 8_2:+54432867 | Msa1255630:CDS |
TTTCAACGTTGAAGGATTCA+AGG | 0.464834 | 8_2:+54432343 | Msa1255630:CDS |
TTGAATCCTTCAACGTTGAA+AGG | 0.468691 | 8_2:-54432341 | None:intergenic |
AATGTCTTTGATTAATTCTG+TGG | 0.470476 | 8_2:-54431419 | None:intergenic |
TATGTCGAACATTATTCATA+GGG | 0.472023 | 8_2:-54430740 | None:intergenic |
CCTCGGGTGGAGAAACTTGA+AGG | 0.472533 | 8_2:-54431600 | None:intergenic |
TTACAGGCTGCATATAATGT+TGG | 0.475584 | 8_2:+54432796 | Msa1255630:intron |
AGTACATTAGAGCCACGTTT+GGG | 0.481357 | 8_2:+54433605 | Msa1255630:CDS |
GAAGGATTCAAGGAGTTTAG+TGG | 0.483934 | 8_2:+54432353 | Msa1255630:CDS |
GAAGTTCAAAGAAATCCAAT+TGG | 0.484909 | 8_2:-54434241 | None:intergenic |
ACTGTCTGGTCACATATTAA+CGG | 0.488449 | 8_2:+54434030 | Msa1255630:three_prime_UTR |
TCGAAGACAAAATTCAAAGC+TGG | 0.492088 | 8_2:+54433222 | Msa1255630:CDS |
TTCTGCTAGACTGATTACTT+TGG | 0.492321 | 8_2:-54432087 | None:intergenic |
ACACTTCAAAAGGAATGTAA+TGG | 0.493365 | 8_2:+54431676 | Msa1255630:CDS |
ACAAAATTCAAAGCTGGAGA+TGG | 0.496463 | 8_2:+54433228 | Msa1255630:CDS |
ATTGTATGTTCCACCTGTCC+AGG | 0.497922 | 8_2:-54432880 | None:intergenic |
GAGCTGGTTAAATAATTACT+TGG | 0.505790 | 8_2:+54433835 | Msa1255630:exon |
GACTTGAAGGTTTGATTCCA+AGG | 0.509105 | 8_2:+54429595 | Msa1255630:CDS |
GATGCAGATGCAGCCACAGC+GGG | 0.513708 | 8_2:-54431523 | None:intergenic |
TAGACTGATTACTTTGGTTG+AGG | 0.515575 | 8_2:-54432081 | None:intergenic |
GCCATATAGCACCATGGTTG+AGG | 0.515583 | 8_2:+54432376 | Msa1255630:CDS |
GCCTTGATCGCCAATAGAAA+AGG | 0.516651 | 8_2:-54432261 | None:intergenic |
ATCTAACTGTACATCAAAAG+AGG | 0.517517 | 8_2:-54432315 | None:intergenic |
GAGGAGTTATTTCTTAACCC+TGG | 0.518333 | 8_2:-54432296 | None:intergenic |
CTCAACTGTTAATTTGAGAT+CGG | 0.519091 | 8_2:-54433965 | None:intergenic |
GAAGAAGAGACTCAGGATGT+TGG | 0.519548 | 8_2:-54433269 | None:intergenic |
GGGATTCAGGTAGAGACTGT+TGG | 0.520236 | 8_2:-54433720 | None:intergenic |
TTATAAAGAGAATCAGAAGT+TGG | 0.520246 | 8_2:+54432409 | Msa1255630:CDS |
CCTGTCCAGGACGAGACATT+CGG | 0.522899 | 8_2:-54432867 | None:intergenic |
AATGTCAAAACACCTAAAAG+TGG | 0.523666 | 8_2:-54429132 | None:intergenic |
GCAAAGTGAAGAAGAGACTC+AGG | 0.524963 | 8_2:-54433276 | None:intergenic |
GGGTGCCGAATGTCTCGTCC+TGG | 0.527623 | 8_2:+54432862 | Msa1255630:CDS |
TGATTCTCTTTATAAATCCA+CGG | 0.529330 | 8_2:-54432401 | None:intergenic |
TGAGACCATCTGCAAATGTT+TGG | 0.535765 | 8_2:+54433868 | Msa1255630:three_prime_UTR |
GGTGACTTGAGAGAAGAAGA+AGG | 0.539375 | 8_2:-54429078 | None:intergenic |
AAGGATTCAAGGAGTTTAGT+GGG | 0.542529 | 8_2:+54432354 | Msa1255630:CDS |
TTTGAAGTGTATGAATCTCA+TGG | 0.544771 | 8_2:-54431663 | None:intergenic |
AGAAATGTCATGCAAAATCC+GGG | 0.554408 | 8_2:+54433758 | Msa1255630:CDS |
CCTTCAAGTTTCTCCACCCG+AGG | 0.559140 | 8_2:+54431600 | Msa1255630:CDS |
TTGATCCGGTTCCAGGACAC+AGG | 0.559997 | 8_2:+54430678 | Msa1255630:intron |
ACTTGAAGGAATCTTGCTCT+AGG | 0.562862 | 8_2:-54431586 | None:intergenic |
GACTTCAGATCAAACAAAGC+TGG | 0.565264 | 8_2:+54430085 | Msa1255630:CDS |
ATATCTGATACCTAAGGAGC+TGG | 0.567502 | 8_2:+54433819 | Msa1255630:CDS |
AATCCGGGAAGAGCATAGAA+TGG | 0.571165 | 8_2:+54433773 | Msa1255630:CDS |
ACAGGCTGCATATAATGTTG+GGG | 0.573278 | 8_2:+54432798 | Msa1255630:intron |
GAAGAAGAAGGGCTTTAAAG+TGG | 0.575852 | 8_2:-54429066 | None:intergenic |
AGCATGACTTACCTCCATCA+TGG | 0.578988 | 8_2:-54431881 | None:intergenic |
AAATGACACGACTATACCCC+AGG | 0.579728 | 8_2:+54431001 | Msa1255630:CDS |
TCGAAGTACTGGGAGATGAA+AGG | 0.580370 | 8_2:-54432232 | None:intergenic |
TCAAGAACTAGAAGTTGCAA+AGG | 0.580877 | 8_2:+54433579 | Msa1255630:CDS |
ATTGACCAAACATTTGCAGA+TGG | 0.581951 | 8_2:-54433873 | None:intergenic |
TTTCTTAACACTCTTTCTCA+GGG | 0.582135 | 8_2:-54433740 | None:intergenic |
TATCGAAAAGTGAAGTTGTG+TGG | 0.588149 | 8_2:-54433799 | None:intergenic |
GACCCACCTATAACTAATCC+GGG | 0.590808 | 8_2:+54432209 | Msa1255630:CDS |
TCACAGAATGCAGTGCAACT+AGG | 0.592322 | 8_2:+54430706 | Msa1255630:CDS |
ATTGTGAAATCTGAACTGTC+TGG | 0.593513 | 8_2:+54434016 | Msa1255630:three_prime_UTR |
AAGGCGACACGTGGAGTCCA+GGG | 0.597096 | 8_2:+54432279 | Msa1255630:CDS |
GTGACTTGAGAGAAGAAGAA+GGG | 0.598271 | 8_2:-54429077 | None:intergenic |
GCTCTAGGTGTTGTTACAGG+AGG | 0.608021 | 8_2:-54431571 | None:intergenic |
CAGGCTGCATATAATGTTGG+GGG | 0.609379 | 8_2:+54432799 | Msa1255630:intron |
TCCTGATAAGGAAACAGTGA+AGG | 0.611868 | 8_2:+54430040 | Msa1255630:CDS |
TGATAAGGAAACAGTGAAGG+AGG | 0.613956 | 8_2:+54430043 | Msa1255630:CDS |
AACAGCTAATAAGCTTTCTG+AGG | 0.613973 | 8_2:+54432145 | Msa1255630:CDS |
TCAACCCTTGTCCATGATGG+AGG | 0.616259 | 8_2:+54431870 | Msa1255630:CDS |
ACTTACCTCCATCATGGACA+AGG | 0.618958 | 8_2:-54431875 | None:intergenic |
TTGGCGATCAAGGCGACACG+TGG | 0.623203 | 8_2:+54432270 | Msa1255630:CDS |
CAATACAAAATACTATACTA+GGG | 0.624356 | 8_2:+54432842 | Msa1255630:CDS |
AATTAGAAGACGTAGATCCA+GGG | 0.625698 | 8_2:+54432477 | Msa1255630:CDS |
GGCCCGGATTAGTTATAGGT+GGG | 0.627934 | 8_2:-54432211 | None:intergenic |
GTACTGGGAGATGAAAGGCC+CGG | 0.628975 | 8_2:-54432227 | None:intergenic |
AGGCCCGGATTAGTTATAGG+TGG | 0.635235 | 8_2:-54432212 | None:intergenic |
ATCAGTCTAGCAGAACATCT+CGG | 0.636239 | 8_2:+54432095 | Msa1255630:CDS |
TCGACATACGCTGAAGCAAG+AGG | 0.636747 | 8_2:+54430755 | Msa1255630:CDS |
ATGTCGAACATTATTCATAG+GGG | 0.640528 | 8_2:-54430739 | None:intergenic |
GGCTGCATCTGCATCTACCG+TGG | 0.641968 | 8_2:+54431531 | Msa1255630:CDS |
AAGGCACTTATCGAAGTACT+GGG | 0.648011 | 8_2:-54432242 | None:intergenic |
GTCCTTGCGTATCCCAAACG+TGG | 0.649954 | 8_2:-54433617 | None:intergenic |
GCACCATGGTTGAGGTACCG+TGG | 0.651466 | 8_2:+54432384 | Msa1255630:CDS |
AGCCACGTTTGGGATACGCA+AGG | 0.661192 | 8_2:+54433615 | Msa1255630:CDS |
TCCAGGGAAGTTGAAGCACG+AGG | 0.672937 | 8_2:+54432493 | Msa1255630:CDS |
TGTTGAATATTGGGATAACG+AGG | 0.674428 | 8_2:-54431785 | None:intergenic |
AGGAAACCACTCTGATCCAG+CGG | 0.677699 | 8_2:+54433308 | Msa1255630:CDS |
CAAGGCATAATCGTTCAAAG+AGG | 0.687916 | 8_2:+54429613 | Msa1255630:CDS |
TAGTGGGCCATATAGCACCA+TGG | 0.691143 | 8_2:+54432370 | Msa1255630:CDS |
TAGTTGCACTGCATTCTGTG+AGG | 0.692782 | 8_2:-54430704 | None:intergenic |
AATCCACGGTACCTCAACCA+TGG | 0.702876 | 8_2:-54432387 | None:intergenic |
CTTACCTCCATCATGGACAA+GGG | 0.706059 | 8_2:-54431874 | None:intergenic |
AGATGCAGATGCAGCCACAG+CGG | 0.716343 | 8_2:-54431524 | None:intergenic |
ACAACAACTATCTCCCGCTG+TGG | 0.724825 | 8_2:+54431510 | Msa1255630:CDS |
TAAGTACCGCTGGATCAGAG+TGG | 0.729686 | 8_2:-54433314 | None:intergenic |
TCTTCGAAGAAAAGAACACG+CGG | 0.751610 | 8_2:-54433206 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTACTGTTTTTATATTATA+TGG | + | chr8_2:54430011-54430030 | Msa1255630:intron | 10.0% |
!! | ATATAAATAATTTACACATA+AGG | - | chr8_2:54432965-54432984 | None:intergenic | 10.0% |
!!! | AATTGTTATTTTTTTCCTTT+TGG | + | chr8_2:54429849-54429868 | Msa1255630:intron | 15.0% |
!!! | ATTGTTATTTTTTTCCTTTT+GGG | + | chr8_2:54429850-54429869 | Msa1255630:intron | 15.0% |
!!! | TTTTTCTAGCTTTTTTAAAT+TGG | + | chr8_2:54430152-54430171 | Msa1255630:intron | 15.0% |
!!! | TTTTCTAGCTTTTTTAAATT+GGG | + | chr8_2:54430153-54430172 | Msa1255630:intron | 15.0% |
!!! | AAATACATCGAATTTAATTT+TGG | + | chr8_2:54430198-54430217 | Msa1255630:intron | 15.0% |
!!! | AAATAGTTTTAATTAAAGCA+TGG | + | chr8_2:54430271-54430290 | Msa1255630:intron | 15.0% |
!!! | AAAAACATTCAGAAAATTTT+GGG | - | chr8_2:54430352-54430371 | None:intergenic | 15.0% |
!!! | AAAAAACATTCAGAAAATTT+TGG | - | chr8_2:54430353-54430372 | None:intergenic | 15.0% |
!!! | TCATTTTTTCAAATTATTAC+CGG | + | chr8_2:54430496-54430515 | Msa1255630:intron | 15.0% |
!! | AATTTGTAATGATCATTTAA+GGG | - | chr8_2:54431291-54431310 | None:intergenic | 15.0% |
!!! | TATTATACGTTTGAAATATT+TGG | + | chr8_2:54431322-54431341 | Msa1255630:intron | 15.0% |
!!! | TTCTTATTTATTCAGAAATG+AGG | - | chr8_2:54429427-54429446 | None:intergenic | 20.0% |
!! | ATAATAGTTGTTATGTTCTT+AGG | + | chr8_2:54429446-54429465 | Msa1255630:exon | 20.0% |
!!! | TTTTTTTTCTTCTTGAAACT+CGG | + | chr8_2:54429670-54429689 | Msa1255630:intron | 20.0% |
!!! | ACTAATTTTCTATATCCATT+TGG | + | chr8_2:54429873-54429892 | Msa1255630:intron | 20.0% |
!!! | TTTTTAAATTGGGAATTTGA+AGG | + | chr8_2:54430163-54430182 | Msa1255630:intron | 20.0% |
!!! | ACTTTTTACAATTGTATATG+TGG | + | chr8_2:54430242-54430261 | Msa1255630:intron | 20.0% |
!! | TTGCAAAATTTAGTATGATA+TGG | + | chr8_2:54430377-54430396 | Msa1255630:intron | 20.0% |
!! | AATCTTATTAATAGTGAACT+TGG | - | chr8_2:54431090-54431109 | None:intergenic | 20.0% |
!! | ACAATTTAGTACATTAATTC+TGG | - | chr8_2:54431181-54431200 | None:intergenic | 20.0% |
!! | CAATTTGTAATGATCATTTA+AGG | - | chr8_2:54431292-54431311 | None:intergenic | 20.0% |
!! | ATGATCATTACAAATTGTTT+AGG | + | chr8_2:54431295-54431314 | Msa1255630:intron | 20.0% |
!!! | GCCTTAATTTGATTAAATTT+TGG | + | chr8_2:54432020-54432039 | Msa1255630:intron | 20.0% |
!! | GCCAAAATTTAATCAAATTA+AGG | - | chr8_2:54432024-54432043 | None:intergenic | 20.0% |
!! | GAGAAATGAAATGTATTAAA+GGG | - | chr8_2:54432594-54432613 | None:intergenic | 20.0% |
!! | AGAGAAATGAAATGTATTAA+AGG | - | chr8_2:54432595-54432614 | None:intergenic | 20.0% |
!!! | GGTTTATTTTTTCTTCTAAT+AGG | + | chr8_2:54432628-54432647 | Msa1255630:intron | 20.0% |
!! | ACAATACAAAATACTATACT+AGG | + | chr8_2:54432841-54432860 | Msa1255630:CDS | 20.0% |
!! | CAATACAAAATACTATACTA+GGG | + | chr8_2:54432842-54432861 | Msa1255630:CDS | 20.0% |
!!! | CAATTATTGTGTATTCTTTT+CGG | + | chr8_2:54433892-54433911 | Msa1255630:three_prime_UTR | 20.0% |
! | AAGTGGAAAATAAACCAAAA+AGG | - | chr8_2:54429118-54429137 | None:intergenic | 25.0% |
!!! | TTGGTTTATTTTCCACTTTT+AGG | + | chr8_2:54429120-54429139 | Msa1255630:five_prime_UTR | 25.0% |
! | CATAGCATAACAATAATCAT+TGG | + | chr8_2:54429218-54429237 | Msa1255630:intron | 25.0% |
! | GAAAAATCAAAGTTACTTCA+AGG | - | chr8_2:54429555-54429574 | None:intergenic | 25.0% |
!! | GATTTTTCATGATGAGTTTT+AGG | + | chr8_2:54429567-54429586 | Msa1255630:intron | 25.0% |
! | TATAGAAAATTAGTCCCAAA+AGG | - | chr8_2:54429867-54429886 | None:intergenic | 25.0% |
!! | TTCTATATCCATTTGGATTT+TGG | + | chr8_2:54429880-54429899 | Msa1255630:intron | 25.0% |
!! | TCTATATCCATTTGGATTTT+GGG | + | chr8_2:54429881-54429900 | Msa1255630:intron | 25.0% |
!! | ATGTTTGAAACTAAAACTGA+AGG | + | chr8_2:54429916-54429935 | Msa1255630:intron | 25.0% |
!! | TGTTTGAAACTAAAACTGAA+GGG | + | chr8_2:54429917-54429936 | Msa1255630:intron | 25.0% |
!! | ACAACTTTTAGATGAAATAG+AGG | - | chr8_2:54430125-54430144 | None:intergenic | 25.0% |
! | CAACTTAACTGAAAAAATGA+TGG | - | chr8_2:54430307-54430326 | None:intergenic | 25.0% |
!!! | CATCATTTTTTCAGTTAAGT+TGG | + | chr8_2:54430305-54430324 | Msa1255630:intron | 25.0% |
!! | TGATTAGAGAAATGATTTTG+TGG | + | chr8_2:54430401-54430420 | Msa1255630:intron | 25.0% |
! | TATGTCGAACATTATTCATA+GGG | - | chr8_2:54430743-54430762 | None:intergenic | 25.0% |
! | TTTGGATTAACAAGAGATAT+GGG | - | chr8_2:54430984-54431003 | None:intergenic | 25.0% |
! | ATTTGGATTAACAAGAGATA+TGG | - | chr8_2:54430985-54431004 | None:intergenic | 25.0% |
! | AATGTCTTTGATTAATTCTG+TGG | - | chr8_2:54431422-54431441 | None:intergenic | 25.0% |
! | AGAGTTAGAAGTTGTATATT+TGG | + | chr8_2:54431450-54431469 | Msa1255630:CDS | 25.0% |
! | TGTACAATGTATTCTTTATC+TGG | - | chr8_2:54431718-54431737 | None:intergenic | 25.0% |
! | TGATTCTCTTTATAAATCCA+CGG | - | chr8_2:54432404-54432423 | None:intergenic | 25.0% |
! | TTATAAAGAGAATCAGAAGT+TGG | + | chr8_2:54432409-54432428 | Msa1255630:CDS | 25.0% |
! | AAATGTATTAAAGGGTAACA+TGG | - | chr8_2:54432586-54432605 | None:intergenic | 25.0% |
! | ATTTCTCTCACATGATTAAT+TGG | + | chr8_2:54432607-54432626 | Msa1255630:intron | 25.0% |
!!! | TTTCTTCTAATAGGCTTTTT+TGG | + | chr8_2:54432637-54432656 | Msa1255630:intron | 25.0% |
!!! | ACAACAGGAATTTTAACTAA+GGG | - | chr8_2:54433136-54433155 | None:intergenic | 25.0% |
! | AGCATCAGGTATTATAAAAA+TGG | - | chr8_2:54433388-54433407 | None:intergenic | 25.0% |
! | GCTGCTACATATTTAAATAT+TGG | - | chr8_2:54434150-54434169 | None:intergenic | 25.0% |
AATGTCAAAACACCTAAAAG+TGG | - | chr8_2:54429135-54429154 | None:intergenic | 30.0% | |
TATTGTTATGCTATGTTCCT+AGG | - | chr8_2:54429213-54429232 | None:intergenic | 30.0% | |
AGCTTCATTCTTTACCTTAA+TGG | + | chr8_2:54429279-54429298 | Msa1255630:intron | 30.0% | |
GCTTCATTCTTTACCTTAAT+GGG | + | chr8_2:54429280-54429299 | Msa1255630:intron | 30.0% | |
!! | ATTCTTTACCTTAATGGGTT+TGG | + | chr8_2:54429285-54429304 | Msa1255630:intron | 30.0% |
!!! | TTCATGATGAGTTTTAGGAA+TGG | + | chr8_2:54429572-54429591 | Msa1255630:intron | 30.0% |
!!! | TCATGATGAGTTTTAGGAAT+GGG | + | chr8_2:54429573-54429592 | Msa1255630:intron | 30.0% |
TACTTTATGTCTCTTGATTG+TGG | + | chr8_2:54429767-54429786 | Msa1255630:intron | 30.0% | |
ATTGTGGAATTTATGCTTGA+GGG | + | chr8_2:54429783-54429802 | Msa1255630:intron | 30.0% | |
! | CTATATCCATTTGGATTTTG+GGG | + | chr8_2:54429882-54429901 | Msa1255630:intron | 30.0% |
TACCACTTCATATCAAAAGT+GGG | + | chr8_2:54430431-54430450 | Msa1255630:intron | 30.0% | |
TTCTACTTAATCACATGTGT+CGG | - | chr8_2:54430471-54430490 | None:intergenic | 30.0% | |
ATTAATCCCATCTCTTAATG+TGG | + | chr8_2:54430574-54430593 | Msa1255630:intron | 30.0% | |
ATATCACCACATTAAGAGAT+GGG | - | chr8_2:54430583-54430602 | None:intergenic | 30.0% | |
AATATCACCACATTAAGAGA+TGG | - | chr8_2:54430584-54430603 | None:intergenic | 30.0% | |
ACTATAGTTGATTATCGTTG+AGG | + | chr8_2:54430614-54430633 | Msa1255630:intron | 30.0% | |
CCTAAAGTATGAATTTGATC+CGG | + | chr8_2:54430664-54430683 | Msa1255630:intron | 30.0% | |
ATGTCGAACATTATTCATAG+GGG | - | chr8_2:54430742-54430761 | None:intergenic | 30.0% | |
GTATGTCGAACATTATTCAT+AGG | - | chr8_2:54430744-54430763 | None:intergenic | 30.0% | |
AAATGACTGATTGAACCATA+CGG | - | chr8_2:54430826-54430845 | None:intergenic | 30.0% | |
!! | AAAACACAAAGTGTTGTAAC+AGG | - | chr8_2:54430858-54430877 | None:intergenic | 30.0% |
AAGACTAGAAGACCAATTTA+AGG | + | chr8_2:54430923-54430942 | Msa1255630:CDS | 30.0% | |
!! | GGTTTTAACCAATTATCAAC+TGG | + | chr8_2:54431143-54431162 | Msa1255630:intron | 30.0% |
! | TCCATGCATAGATGTAATTT+TGG | + | chr8_2:54431222-54431241 | Msa1255630:intron | 30.0% |
ACCAAAATTACATCTATGCA+TGG | - | chr8_2:54431226-54431245 | None:intergenic | 30.0% | |
TCTTTGATTAATTCTGTGGT+TGG | - | chr8_2:54431418-54431437 | None:intergenic | 30.0% | |
! | GTTGTTGTTCAAATGCTTTA+CGG | - | chr8_2:54431498-54431517 | None:intergenic | 30.0% |
!!! | TACATCTGAACATCCTTTTT+TGG | - | chr8_2:54431632-54431651 | None:intergenic | 30.0% |
! | TTTGAAGTGTATGAATCTCA+TGG | - | chr8_2:54431666-54431685 | None:intergenic | 30.0% |
TGAGATTCATACACTTCAAA+AGG | + | chr8_2:54431666-54431685 | Msa1255630:CDS | 30.0% | |
ACACTTCAAAAGGAATGTAA+TGG | + | chr8_2:54431676-54431695 | Msa1255630:CDS | 30.0% | |
TGCTGTAGATGTTGAATATT+GGG | - | chr8_2:54431797-54431816 | None:intergenic | 30.0% | |
TTGCTGTAGATGTTGAATAT+TGG | - | chr8_2:54431798-54431817 | None:intergenic | 30.0% | |
CATAACAGAACTGATGAATT+AGG | - | chr8_2:54431949-54431968 | None:intergenic | 30.0% | |
! | GAGAATGATAGTACTTTTCT+AGG | + | chr8_2:54431998-54432017 | Msa1255630:intron | 30.0% |
TGGAATATGATCACATATTC+GGG | - | chr8_2:54432123-54432142 | None:intergenic | 30.0% | |
CTGGAATATGATCACATATT+CGG | - | chr8_2:54432124-54432143 | None:intergenic | 30.0% | |
! | TAATAAGCTTTCTGAGGATA+TGG | + | chr8_2:54432151-54432170 | Msa1255630:CDS | 30.0% |
ATCTAACTGTACATCAAAAG+AGG | - | chr8_2:54432318-54432337 | None:intergenic | 30.0% | |
AAATAAGTGACCTGAAATTC+TGG | - | chr8_2:54432454-54432473 | None:intergenic | 30.0% | |
!!! | TAATAGGCTTTTTTGGCTTA+TGG | + | chr8_2:54432644-54432663 | Msa1255630:intron | 30.0% |
!! | ACTCTTTTCACATTGTTTTG+TGG | - | chr8_2:54432674-54432693 | None:intergenic | 30.0% |
ATTCTTATAGGGTTAGAGTT+GGG | - | chr8_2:54432906-54432925 | None:intergenic | 30.0% | |
AATTCTTATAGGGTTAGAGT+TGG | - | chr8_2:54432907-54432926 | None:intergenic | 30.0% | |
ACAAGCGGTTAATTCTTATA+GGG | - | chr8_2:54432917-54432936 | None:intergenic | 30.0% | |
TACAAGCGGTTAATTCTTAT+AGG | - | chr8_2:54432918-54432937 | None:intergenic | 30.0% | |
TAAACGCAATATGATACAAG+CGG | - | chr8_2:54432932-54432951 | None:intergenic | 30.0% | |
!!! | ATTTTAACTAAGGGCTTGTT+TGG | - | chr8_2:54433127-54433146 | None:intergenic | 30.0% |
!!! | CACAACAGGAATTTTAACTA+AGG | - | chr8_2:54433137-54433156 | None:intergenic | 30.0% |
TTCAGTACTCAACATTTGTT+TGG | + | chr8_2:54433417-54433436 | Msa1255630:intron | 30.0% | |
!!! | TCTTAGGTAGAAGTATTTTC+TGG | - | chr8_2:54433642-54433661 | None:intergenic | 30.0% |
GAGAATGTATCTACAATCTT+AGG | - | chr8_2:54433658-54433677 | None:intergenic | 30.0% | |
ATGAGTAAAACCTGAATCTT+TGG | - | chr8_2:54433680-54433699 | None:intergenic | 30.0% | |
TTTCTTAACACTCTTTCTCA+GGG | - | chr8_2:54433743-54433762 | None:intergenic | 30.0% | |
ATTTCTTAACACTCTTTCTC+AGG | - | chr8_2:54433744-54433763 | None:intergenic | 30.0% | |
AAGAAATGTCATGCAAAATC+CGG | + | chr8_2:54433757-54433776 | Msa1255630:CDS | 30.0% | |
! | TTTTCGATATCTGATACCTA+AGG | + | chr8_2:54433813-54433832 | Msa1255630:CDS | 30.0% |
AATTATTTAACCAGCTCCTT+AGG | - | chr8_2:54433832-54433851 | None:intergenic | 30.0% | |
GAGCTGGTTAAATAATTACT+TGG | + | chr8_2:54433835-54433854 | Msa1255630:exon | 30.0% | |
! | TTGTGTATTCTTTTCGGATT+TGG | + | chr8_2:54433898-54433917 | Msa1255630:three_prime_UTR | 30.0% |
! | ATTCTTTTCGGATTTGGATT+TGG | + | chr8_2:54433904-54433923 | Msa1255630:three_prime_UTR | 30.0% |
! | CTCAACTGTTAATTTGAGAT+CGG | - | chr8_2:54433968-54433987 | None:intergenic | 30.0% |
! | TGTCAATTTTGTACAAAACC+AGG | - | chr8_2:54434106-54434125 | None:intergenic | 30.0% |
!! | GGTTTTGTACAAAATTGACA+AGG | + | chr8_2:54434106-54434125 | Msa1255630:three_prime_UTR | 30.0% |
GAAGTTCAAAGAAATCCAAT+TGG | - | chr8_2:54434244-54434263 | None:intergenic | 30.0% | |
!! | AAAAAGGTTCTAGAGATCCA+AGG | - | chr8_2:54429102-54429121 | None:intergenic | 35.0% |
!!! | TTGGATCTCTAGAACCTTTT+TGG | + | chr8_2:54429101-54429120 | Msa1255630:five_prime_UTR | 35.0% |
!!! | TACCTTTTGAGGTTTGTTGA+GGG | - | chr8_2:54429176-54429195 | None:intergenic | 35.0% |
!!! | TTACCTTTTGAGGTTTGTTG+AGG | - | chr8_2:54429177-54429196 | None:intergenic | 35.0% |
! | TTGTAAAGGGTTACCTTTTG+AGG | - | chr8_2:54429187-54429206 | None:intergenic | 35.0% |
! | TGTTCCTAGGCTTTTGTAAA+GGG | - | chr8_2:54429200-54429219 | None:intergenic | 35.0% |
! | ATGTTCCTAGGCTTTTGTAA+AGG | - | chr8_2:54429201-54429220 | None:intergenic | 35.0% |
AATAATCATTGGAGCAGTGT+TGG | + | chr8_2:54429229-54429248 | Msa1255630:intron | 35.0% | |
GTCAAAAAGAACAGTCTCAT+TGG | + | chr8_2:54429251-54429270 | Msa1255630:intron | 35.0% | |
!! | TTACCTTAATGGGTTTGGTT+TGG | + | chr8_2:54429290-54429309 | Msa1255630:intron | 35.0% |
AAACCAAACCAAACCCATTA+AGG | - | chr8_2:54429296-54429315 | None:intergenic | 35.0% | |
TCTTCTTGAAACTCGGTATT+CGG | + | chr8_2:54429677-54429696 | Msa1255630:intron | 35.0% | |
GATTGTGGAATTTATGCTTG+AGG | + | chr8_2:54429782-54429801 | Msa1255630:intron | 35.0% | |
TTGTGGAATTTATGCTTGAG+GGG | + | chr8_2:54429784-54429803 | Msa1255630:intron | 35.0% | |
!! | TTGAGGGGTTGTTTATTTTC+TGG | + | chr8_2:54429799-54429818 | Msa1255630:intron | 35.0% |
! | CACTTTTGATATGAAGTGGT+AGG | - | chr8_2:54430432-54430451 | None:intergenic | 35.0% |
CTACCACTTCATATCAAAAG+TGG | + | chr8_2:54430430-54430449 | Msa1255630:intron | 35.0% | |
!! | AACCCACTTTTGATATGAAG+TGG | - | chr8_2:54430436-54430455 | None:intergenic | 35.0% |
TATTACCGGTATCTACATGT+CGG | + | chr8_2:54430510-54430529 | Msa1255630:intron | 35.0% | |
! | TCATAGAAAGCATGCATATG+TGG | + | chr8_2:54430549-54430568 | Msa1255630:intron | 35.0% |
CCGGATCAAATTCATACTTT+AGG | - | chr8_2:54430667-54430686 | None:intergenic | 35.0% | |
GAACCATACGGCTAAAAATA+TGG | - | chr8_2:54430814-54430833 | None:intergenic | 35.0% | |
ATGTGCATCTGACCTTAAAT+TGG | - | chr8_2:54430938-54430957 | None:intergenic | 35.0% | |
!! | TGCACATTAGAAAAAGCACT+TGG | + | chr8_2:54430951-54430970 | Msa1255630:CDS | 35.0% |
GTGAACTTGGAAAGAAAAAG+TGG | - | chr8_2:54431077-54431096 | None:intergenic | 35.0% | |
CACAATAACTTTATGCTTGC+CGG | - | chr8_2:54431265-54431284 | None:intergenic | 35.0% | |
TTCAAATGCTTTACGGTACA+AGG | - | chr8_2:54431491-54431510 | None:intergenic | 35.0% | |
! | AGACTTTTCACTTTCTTCCA+CGG | - | chr8_2:54431551-54431570 | None:intergenic | 35.0% |
!!! | TCCTTTTTTGGTTAAGACCT+CGG | - | chr8_2:54431620-54431639 | None:intergenic | 35.0% |
! | TATTCTTTATCTGGAGTCTC+AGG | - | chr8_2:54431709-54431728 | None:intergenic | 35.0% |
TGTTGAATATTGGGATAACG+AGG | - | chr8_2:54431788-54431807 | None:intergenic | 35.0% | |
!!! | ACCTGTTTTAATATGTCGTC+TGG | + | chr8_2:54431921-54431940 | Msa1255630:intron | 35.0% |
TAGACTGATTACTTTGGTTG+AGG | - | chr8_2:54432084-54432103 | None:intergenic | 35.0% | |
TTCTGCTAGACTGATTACTT+TGG | - | chr8_2:54432090-54432109 | None:intergenic | 35.0% | |
! | GAAAGCTTATTAGCTGTTTC+TGG | - | chr8_2:54432143-54432162 | None:intergenic | 35.0% |
AACAGCTAATAAGCTTTCTG+AGG | + | chr8_2:54432145-54432164 | Msa1255630:CDS | 35.0% | |
! | TCGATAAGTGCCTTTTCTAT+TGG | + | chr8_2:54432251-54432270 | Msa1255630:CDS | 35.0% |
GATAATCCTTTCAACGTTGA+AGG | + | chr8_2:54432335-54432354 | Msa1255630:CDS | 35.0% | |
TTGAATCCTTCAACGTTGAA+AGG | - | chr8_2:54432344-54432363 | None:intergenic | 35.0% | |
TTTCAACGTTGAAGGATTCA+AGG | + | chr8_2:54432343-54432362 | Msa1255630:CDS | 35.0% | |
AAGGATTCAAGGAGTTTAGT+GGG | + | chr8_2:54432354-54432373 | Msa1255630:CDS | 35.0% | |
AATTAGAAGACGTAGATCCA+GGG | + | chr8_2:54432477-54432496 | Msa1255630:CDS | 35.0% | |
AAGAGTCTTTCTTCTCTTGA+AGG | + | chr8_2:54432688-54432707 | Msa1255630:CDS | 35.0% | |
GAAAGTCAGCTAAAGTAGAT+AGG | - | chr8_2:54432761-54432780 | None:intergenic | 35.0% | |
TTACAGGCTGCATATAATGT+TGG | + | chr8_2:54432796-54432815 | Msa1255630:intron | 35.0% | |
TACAGGCTGCATATAATGTT+GGG | + | chr8_2:54432797-54432816 | Msa1255630:intron | 35.0% | |
TCGAAGACAAAATTCAAAGC+TGG | + | chr8_2:54433222-54433241 | Msa1255630:CDS | 35.0% | |
ACAAAATTCAAAGCTGGAGA+TGG | + | chr8_2:54433228-54433247 | Msa1255630:CDS | 35.0% | |
CTGAATGTAAAGATAGCATC+AGG | - | chr8_2:54433402-54433421 | None:intergenic | 35.0% | |
TTGTTTGGACAAATACCTTC+TGG | + | chr8_2:54433432-54433451 | Msa1255630:intron | 35.0% | |
GTTGTACTGAACTTTATGAC+AGG | + | chr8_2:54433528-54433547 | Msa1255630:intron | 35.0% | |
AGTTCTTGAAACACTCTCTT+CGG | - | chr8_2:54433568-54433587 | None:intergenic | 35.0% | |
TCAAGAACTAGAAGTTGCAA+AGG | + | chr8_2:54433579-54433598 | Msa1255630:CDS | 35.0% | |
GATACATTCTCCAAAGATTC+AGG | + | chr8_2:54433667-54433686 | Msa1255630:CDS | 35.0% | |
AGAAATGTCATGCAAAATCC+GGG | + | chr8_2:54433758-54433777 | Msa1255630:CDS | 35.0% | |
TATCGAAAAGTGAAGTTGTG+TGG | - | chr8_2:54433802-54433821 | None:intergenic | 35.0% | |
ATTGACCAAACATTTGCAGA+TGG | - | chr8_2:54433876-54433895 | None:intergenic | 35.0% | |
ATTGTGAAATCTGAACTGTC+TGG | + | chr8_2:54434016-54434035 | Msa1255630:three_prime_UTR | 35.0% | |
ACTGTCTGGTCACATATTAA+CGG | + | chr8_2:54434030-54434049 | Msa1255630:three_prime_UTR | 35.0% | |
!! | GAAGAAGAAGGGCTTTAAAG+TGG | - | chr8_2:54429069-54429088 | None:intergenic | 40.0% |
GTGACTTGAGAGAAGAAGAA+GGG | - | chr8_2:54429080-54429099 | None:intergenic | 40.0% | |
TTGAGGGTAGTGATAGAGTA+AGG | - | chr8_2:54429160-54429179 | None:intergenic | 40.0% | |
TACCCTCAACAAACCTCAAA+AGG | + | chr8_2:54429171-54429190 | Msa1255630:five_prime_UTR | 40.0% | |
GTAACCCTTTACAAAAGCCT+AGG | + | chr8_2:54429193-54429212 | Msa1255630:intron | 40.0% | |
! | TTGTTGCACAGTGTCATTAG+TGG | + | chr8_2:54429324-54429343 | Msa1255630:intron | 40.0% |
!!! | GTTTTAGGAATGGGACTTGA+AGG | + | chr8_2:54429582-54429601 | Msa1255630:intron | 40.0% |
GACTTGAAGGTTTGATTCCA+AGG | + | chr8_2:54429595-54429614 | Msa1255630:CDS | 40.0% | |
CTCTTTGAACGATTATGCCT+TGG | - | chr8_2:54429615-54429634 | None:intergenic | 40.0% | |
CAAGGCATAATCGTTCAAAG+AGG | + | chr8_2:54429613-54429632 | Msa1255630:CDS | 40.0% | |
CTTTCTCCCCAAAATCCAAA+TGG | - | chr8_2:54429891-54429910 | None:intergenic | 40.0% | |
!! | CATTTGGATTTTGGGGAGAA+AGG | + | chr8_2:54429889-54429908 | Msa1255630:intron | 40.0% |
ATATGGCAGCTTTCCTGATA+AGG | + | chr8_2:54430028-54430047 | Msa1255630:intron | 40.0% | |
TCCTGATAAGGAAACAGTGA+AGG | + | chr8_2:54430040-54430059 | Msa1255630:CDS | 40.0% | |
TCCTTCACTGTTTCCTTATC+AGG | - | chr8_2:54430044-54430063 | None:intergenic | 40.0% | |
TGATAAGGAAACAGTGAAGG+AGG | + | chr8_2:54430043-54430062 | Msa1255630:CDS | 40.0% | |
GACTTCAGATCAAACAAAGC+TGG | + | chr8_2:54430085-54430104 | Msa1255630:CDS | 40.0% | |
GTTGGTATTATGAACGTGCA+AGG | + | chr8_2:54430323-54430342 | Msa1255630:intron | 40.0% | |
TATGAATTTGATCCGGTTCC+AGG | + | chr8_2:54430671-54430690 | Msa1255630:intron | 40.0% | |
!!! | CAGCCATATTTTTAGCCGTA+TGG | + | chr8_2:54430808-54430827 | Msa1255630:intron | 40.0% |
GTTGAAGAAATTCCAACCTG+GGG | - | chr8_2:54431020-54431039 | None:intergenic | 40.0% | |
CGTTGAAGAAATTCCAACCT+GGG | - | chr8_2:54431021-54431040 | None:intergenic | 40.0% | |
TCGTTGAAGAAATTCCAACC+TGG | - | chr8_2:54431022-54431041 | None:intergenic | 40.0% | |
TGCAATTTCTTCGATGTCGA+CGG | + | chr8_2:54431122-54431141 | Msa1255630:intron | 40.0% | |
!! | GTCACACACCAGTTGATAAT+TGG | - | chr8_2:54431154-54431173 | None:intergenic | 40.0% |
TGATTAATTCTGTGGTTGGC+TGG | - | chr8_2:54431414-54431433 | None:intergenic | 40.0% | |
ACTTGAAGGAATCTTGCTCT+AGG | - | chr8_2:54431589-54431608 | None:intergenic | 40.0% | |
!!! | CCTTTTTTGGTTAAGACCTC+GGG | - | chr8_2:54431619-54431638 | None:intergenic | 40.0% |
! | GAGTCTGAATGCTTTTCTTC+TGG | - | chr8_2:54431745-54431764 | None:intergenic | 40.0% |
GCCAGACGACATATTAAAAC+AGG | - | chr8_2:54431925-54431944 | None:intergenic | 40.0% | |
ATCAGTCTAGCAGAACATCT+CGG | + | chr8_2:54432095-54432114 | Msa1255630:CDS | 40.0% | |
AGACCCACCTATAACTAATC+CGG | + | chr8_2:54432208-54432227 | Msa1255630:CDS | 40.0% | |
! | AAGGCACTTATCGAAGTACT+GGG | - | chr8_2:54432245-54432264 | None:intergenic | 40.0% |
!! | AAAGGCACTTATCGAAGTAC+TGG | - | chr8_2:54432246-54432265 | None:intergenic | 40.0% |
!! | GAGGAGTTATTTCTTAACCC+TGG | - | chr8_2:54432299-54432318 | None:intergenic | 40.0% |
GAAGGATTCAAGGAGTTTAG+TGG | + | chr8_2:54432353-54432372 | Msa1255630:CDS | 40.0% | |
AACAGTTGCTCCAGAATTTC+AGG | + | chr8_2:54432441-54432460 | Msa1255630:CDS | 40.0% | |
CAATTAGAAGACGTAGATCC+AGG | + | chr8_2:54432476-54432495 | Msa1255630:CDS | 40.0% | |
CTCAGTGTATTGCTCTTTAC+AGG | + | chr8_2:54432780-54432799 | Msa1255630:intron | 40.0% | |
ACAGGCTGCATATAATGTTG+GGG | + | chr8_2:54432798-54432817 | Msa1255630:intron | 40.0% | |
GAGCTATCTTGAAGAGCTTA+TGG | + | chr8_2:54433019-54433038 | Msa1255630:intron | 40.0% | |
! | AAGCACTTGTGATGCTGTTT+CGG | - | chr8_2:54433074-54433093 | None:intergenic | 40.0% |
GATCTCATAAGTCACACAAC+AGG | - | chr8_2:54433151-54433170 | None:intergenic | 40.0% | |
TAACTTTCTTCCTCTTGCAG+TGG | + | chr8_2:54433181-54433200 | Msa1255630:intron | 40.0% | |
TCTTCGAAGAAAAGAACACG+CGG | - | chr8_2:54433209-54433228 | None:intergenic | 40.0% | |
CTTCACTTTGCACTTTGTTC+AGG | + | chr8_2:54433288-54433307 | Msa1255630:CDS | 40.0% | |
AGTACATTAGAGCCACGTTT+GGG | + | chr8_2:54433605-54433624 | Msa1255630:CDS | 40.0% | |
!! | GATTCAGGTTTTACTCATGC+TGG | + | chr8_2:54433682-54433701 | Msa1255630:CDS | 40.0% |
AATCCATTCTATGCTCTTCC+CGG | - | chr8_2:54433779-54433798 | None:intergenic | 40.0% | |
ATATCTGATACCTAAGGAGC+TGG | + | chr8_2:54433819-54433838 | Msa1255630:CDS | 40.0% | |
TGAGACCATCTGCAAATGTT+TGG | + | chr8_2:54433868-54433887 | Msa1255630:three_prime_UTR | 40.0% | |
! | TTACACGCAGTTTTCGATCT+CGG | - | chr8_2:54434056-54434075 | None:intergenic | 40.0% |
TTGTCTACTGTAACAGATCC+TGG | + | chr8_2:54434085-54434104 | Msa1255630:three_prime_UTR | 40.0% | |
GCAGTCAATCAAATGCCAAT+TGG | + | chr8_2:54434226-54434245 | Msa1255630:three_prime_UTR | 40.0% | |
GGTGACTTGAGAGAAGAAGA+AGG | - | chr8_2:54429081-54429100 | None:intergenic | 45.0% | |
CTTCTTCTCTCAAGTCACCT+TGG | + | chr8_2:54429082-54429101 | Msa1255630:five_prime_UTR | 45.0% | |
! | CTGCTAATGGACAGTGGAAT+CGG | - | chr8_2:54429711-54429730 | None:intergenic | 45.0% |
ATTCCACTGTCCATTAGCAG+AGG | + | chr8_2:54429711-54429730 | Msa1255630:intron | 45.0% | |
TTCAATTGGGCCTCTGCTAA+TGG | - | chr8_2:54429724-54429743 | None:intergenic | 45.0% | |
GCTTTGCTCCGACTTCAATT+GGG | - | chr8_2:54429737-54429756 | None:intergenic | 45.0% | |
AGCTTTGCTCCGACTTCAAT+TGG | - | chr8_2:54429738-54429757 | None:intergenic | 45.0% | |
AGACACCGACATGTAGATAC+CGG | - | chr8_2:54430518-54430537 | None:intergenic | 45.0% | |
TAGTTGCACTGCATTCTGTG+AGG | - | chr8_2:54430707-54430726 | None:intergenic | 45.0% | |
TCACAGAATGCAGTGCAACT+AGG | + | chr8_2:54430706-54430725 | Msa1255630:CDS | 45.0% | |
! | TGGGGTATAGTCGTGTCATT+TGG | - | chr8_2:54431002-54431021 | None:intergenic | 45.0% |
AAATGACACGACTATACCCC+AGG | + | chr8_2:54431001-54431020 | Msa1255630:CDS | 45.0% | |
!! | CTTGCTCTAGGTGTTGTTAC+AGG | - | chr8_2:54431577-54431596 | None:intergenic | 45.0% |
!!! | TTTTTGGTTAAGACCTCGGG+TGG | - | chr8_2:54431616-54431635 | None:intergenic | 45.0% |
CCCGAGGTCTTAACCAAAAA+AGG | + | chr8_2:54431616-54431635 | Msa1255630:CDS | 45.0% | |
GGACAAGGGTTGAGAATAAC+AGG | - | chr8_2:54431863-54431882 | None:intergenic | 45.0% | |
TTCTCAACCCTTGTCCATGA+TGG | + | chr8_2:54431867-54431886 | Msa1255630:CDS | 45.0% | |
CTTACCTCCATCATGGACAA+GGG | - | chr8_2:54431877-54431896 | None:intergenic | 45.0% | |
ACTTACCTCCATCATGGACA+AGG | - | chr8_2:54431878-54431897 | None:intergenic | 45.0% | |
AGCATGACTTACCTCCATCA+TGG | - | chr8_2:54431884-54431903 | None:intergenic | 45.0% | |
TGGAGGTAAGTCATGCTTCA+TGG | + | chr8_2:54431887-54431906 | Msa1255630:intron | 45.0% | |
GACCCACCTATAACTAATCC+GGG | + | chr8_2:54432209-54432228 | Msa1255630:CDS | 45.0% | |
!! | GAAAGGCCCGGATTAGTTAT+AGG | - | chr8_2:54432218-54432237 | None:intergenic | 45.0% |
!! | TCGAAGTACTGGGAGATGAA+AGG | - | chr8_2:54432235-54432254 | None:intergenic | 45.0% |
! | GCCTTTTCTATTGGCGATCA+AGG | + | chr8_2:54432260-54432279 | Msa1255630:CDS | 45.0% |
GCCTTGATCGCCAATAGAAA+AGG | - | chr8_2:54432264-54432283 | None:intergenic | 45.0% | |
!! | ACCTCAACCATGGTGCTATA+TGG | - | chr8_2:54432380-54432399 | None:intergenic | 45.0% |
!! | ACGAGGAGAAGTTAGCTTTC+TGG | + | chr8_2:54432510-54432529 | Msa1255630:CDS | 45.0% |
CAGGCTGCATATAATGTTGG+GGG | + | chr8_2:54432799-54432818 | Msa1255630:intron | 45.0% | |
ATTGTATGTTCCACCTGTCC+AGG | - | chr8_2:54432883-54432902 | None:intergenic | 45.0% | |
GAAGAAGAGACTCAGGATGT+TGG | - | chr8_2:54433272-54433291 | None:intergenic | 45.0% | |
GCAAAGTGAAGAAGAGACTC+AGG | - | chr8_2:54433279-54433298 | None:intergenic | 45.0% | |
! | AGAACTGAGATAAGTACCGC+TGG | - | chr8_2:54433327-54433346 | None:intergenic | 45.0% |
ACAAATACCTTCTGGCACTG+TGG | + | chr8_2:54433440-54433459 | Msa1255630:intron | 45.0% | |
CAAATACCTTCTGGCACTGT+GGG | + | chr8_2:54433441-54433460 | Msa1255630:intron | 45.0% | |
GAGTACATTAGAGCCACGTT+TGG | + | chr8_2:54433604-54433623 | Msa1255630:CDS | 45.0% | |
ACACTCTTTCTCAGGGATTC+AGG | - | chr8_2:54433736-54433755 | None:intergenic | 45.0% | |
! | AATCCGGGAAGAGCATAGAA+TGG | + | chr8_2:54433773-54433792 | Msa1255630:CDS | 45.0% |
AGCAGAGGCCCAATTGAAGT+CGG | + | chr8_2:54429726-54429745 | Msa1255630:intron | 50.0% | |
! | AGTCGGAGCAAAGCTCTAGT+TGG | + | chr8_2:54429743-54429762 | Msa1255630:intron | 50.0% |
! | GTCGGAGCAAAGCTCTAGTT+GGG | + | chr8_2:54429744-54429763 | Msa1255630:intron | 50.0% |
! | CTACATGTCGGTGTCTGTGT+CGG | + | chr8_2:54430522-54430541 | Msa1255630:intron | 50.0% |
TCGACATACGCTGAAGCAAG+AGG | + | chr8_2:54430755-54430774 | Msa1255630:CDS | 50.0% | |
GGTTTCTGCCATGTATGTGC+CGG | + | chr8_2:54431243-54431262 | Msa1255630:intron | 50.0% | |
TATGCTTGCCGGCACATACA+TGG | - | chr8_2:54431254-54431273 | None:intergenic | 50.0% | |
ACAACAACTATCTCCCGCTG+TGG | + | chr8_2:54431510-54431529 | Msa1255630:CDS | 50.0% | |
!! | GCTCTAGGTGTTGTTACAGG+AGG | - | chr8_2:54431574-54431593 | None:intergenic | 50.0% |
TCAACCCTTGTCCATGATGG+AGG | + | chr8_2:54431870-54431889 | Msa1255630:CDS | 50.0% | |
!! | GGCCCGGATTAGTTATAGGT+GGG | - | chr8_2:54432214-54432233 | None:intergenic | 50.0% |
!! | AGGCCCGGATTAGTTATAGG+TGG | - | chr8_2:54432215-54432234 | None:intergenic | 50.0% |
! | TAGTGGGCCATATAGCACCA+TGG | + | chr8_2:54432370-54432389 | Msa1255630:CDS | 50.0% |
GCCATATAGCACCATGGTTG+AGG | + | chr8_2:54432376-54432395 | Msa1255630:CDS | 50.0% | |
AATCCACGGTACCTCAACCA+TGG | - | chr8_2:54432390-54432409 | None:intergenic | 50.0% | |
AGGAAACCACTCTGATCCAG+CGG | + | chr8_2:54433308-54433327 | Msa1255630:CDS | 50.0% | |
! | TAAGTACCGCTGGATCAGAG+TGG | - | chr8_2:54433317-54433336 | None:intergenic | 50.0% |
GGGATTCAGGTAGAGACTGT+TGG | - | chr8_2:54433723-54433742 | None:intergenic | 50.0% | |
TTGATCCGGTTCCAGGACAC+AGG | + | chr8_2:54430678-54430697 | Msa1255630:intron | 55.0% | |
GGTAACCTGTGTCCTGGAAC+CGG | - | chr8_2:54430686-54430705 | None:intergenic | 55.0% | |
CTGTGAGGTAACCTGTGTCC+TGG | - | chr8_2:54430692-54430711 | None:intergenic | 55.0% | |
GACACGACTATACCCCAGGT+TGG | + | chr8_2:54431005-54431024 | Msa1255630:intron | 55.0% | |
AGATGCAGATGCAGCCACAG+CGG | - | chr8_2:54431527-54431546 | None:intergenic | 55.0% | |
CCTCGGGTGGAGAAACTTGA+AGG | - | chr8_2:54431603-54431622 | None:intergenic | 55.0% | |
! | CCTTCAAGTTTCTCCACCCG+AGG | + | chr8_2:54431600-54431619 | Msa1255630:CDS | 55.0% |
GTACTGGGAGATGAAAGGCC+CGG | - | chr8_2:54432230-54432249 | None:intergenic | 55.0% | |
TCCAGGGAAGTTGAAGCACG+AGG | + | chr8_2:54432493-54432512 | Msa1255630:CDS | 55.0% | |
TCCTCGTGCTTCAACTTCCC+TGG | - | chr8_2:54432497-54432516 | None:intergenic | 55.0% | |
CCTGTCCAGGACGAGACATT+CGG | - | chr8_2:54432870-54432889 | None:intergenic | 55.0% | |
AATGTCTCGTCCTGGACAGG+TGG | + | chr8_2:54432870-54432889 | Msa1255630:intron | 55.0% | |
TGATCACCCACAGTGCCAGA+AGG | - | chr8_2:54433450-54433469 | None:intergenic | 55.0% | |
! | AGCCACGTTTGGGATACGCA+AGG | + | chr8_2:54433615-54433634 | Msa1255630:CDS | 55.0% |
GTCCTTGCGTATCCCAAACG+TGG | - | chr8_2:54433620-54433639 | None:intergenic | 55.0% | |
! | GGGCCTCTGCTAATGGACAG+TGG | - | chr8_2:54429717-54429736 | None:intergenic | 60.0% |
GATGCAGATGCAGCCACAGC+GGG | - | chr8_2:54431526-54431545 | None:intergenic | 60.0% | |
GGCTGCATCTGCATCTACCG+TGG | + | chr8_2:54431531-54431550 | Msa1255630:CDS | 60.0% | |
TTGGCGATCAAGGCGACACG+TGG | + | chr8_2:54432270-54432289 | Msa1255630:CDS | 60.0% | |
AAGGCGACACGTGGAGTCCA+GGG | + | chr8_2:54432279-54432298 | Msa1255630:CDS | 60.0% | |
!! | GCACCATGGTTGAGGTACCG+TGG | + | chr8_2:54432384-54432403 | Msa1255630:CDS | 60.0% |
CCGAATGTCTCGTCCTGGAC+AGG | + | chr8_2:54432867-54432886 | Msa1255630:CDS | 60.0% | |
ACACGCGGAACCACTGCAAG+AGG | - | chr8_2:54433194-54433213 | None:intergenic | 60.0% | |
CAAGGCGACACGTGGAGTCC+AGG | + | chr8_2:54432278-54432297 | Msa1255630:CDS | 65.0% | |
!! | GGGTGCCGAATGTCTCGTCC+TGG | + | chr8_2:54432862-54432881 | Msa1255630:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 54429046 | 54434281 | 54429046 | ID=Msa1255630;Name=Msa1255630 |
chr8_2 | mRNA | 54429046 | 54434281 | 54429046 | ID=Msa1255630-mRNA-1;Parent=Msa1255630;Name=Msa1255630-mRNA-1;_AED=0.13;_eAED=0.13;_QI=249|1|1|1|0.75|0.69|13|432|626 |
chr8_2 | exon | 54429046 | 54429192 | 54429046 | ID=Msa1255630-mRNA-1:exon:16841;Parent=Msa1255630-mRNA-1 |
chr8_2 | exon | 54429335 | 54429392 | 54429335 | ID=Msa1255630-mRNA-1:exon:16842;Parent=Msa1255630-mRNA-1 |
chr8_2 | exon | 54429414 | 54429467 | 54429414 | ID=Msa1255630-mRNA-1:exon:16843;Parent=Msa1255630-mRNA-1 |
chr8_2 | exon | 54429589 | 54429634 | 54429589 | ID=Msa1255630-mRNA-1:exon:16844;Parent=Msa1255630-mRNA-1 |
chr8_2 | exon | 54430037 | 54430106 | 54430037 | ID=Msa1255630-mRNA-1:exon:16845;Parent=Msa1255630-mRNA-1 |
chr8_2 | exon | 54430693 | 54430776 | 54430693 | ID=Msa1255630-mRNA-1:exon:16846;Parent=Msa1255630-mRNA-1 |
chr8_2 | exon | 54430906 | 54431022 | 54430906 | ID=Msa1255630-mRNA-1:exon:16847;Parent=Msa1255630-mRNA-1 |
chr8_2 | exon | 54431415 | 54431891 | 54431415 | ID=Msa1255630-mRNA-1:exon:16848;Parent=Msa1255630-mRNA-1 |
chr8_2 | exon | 54432062 | 54432562 | 54432062 | ID=Msa1255630-mRNA-1:exon:16849;Parent=Msa1255630-mRNA-1 |
chr8_2 | exon | 54432650 | 54432709 | 54432650 | ID=Msa1255630-mRNA-1:exon:16850;Parent=Msa1255630-mRNA-1 |
chr8_2 | exon | 54432802 | 54432888 | 54432802 | ID=Msa1255630-mRNA-1:exon:16851;Parent=Msa1255630-mRNA-1 |
chr8_2 | exon | 54433201 | 54433329 | 54433201 | ID=Msa1255630-mRNA-1:exon:16852;Parent=Msa1255630-mRNA-1 |
chr8_2 | exon | 54433550 | 54434281 | 54433550 | ID=Msa1255630-mRNA-1:exon:16853;Parent=Msa1255630-mRNA-1 |
chr8_2 | five_prime_UTR | 54429046 | 54429192 | 54429046 | ID=Msa1255630-mRNA-1:five_prime_utr;Parent=Msa1255630-mRNA-1 |
chr8_2 | five_prime_UTR | 54429335 | 54429392 | 54429335 | ID=Msa1255630-mRNA-1:five_prime_utr;Parent=Msa1255630-mRNA-1 |
chr8_2 | five_prime_UTR | 54429414 | 54429457 | 54429414 | ID=Msa1255630-mRNA-1:five_prime_utr;Parent=Msa1255630-mRNA-1 |
chr8_2 | CDS | 54429458 | 54429467 | 54429458 | ID=Msa1255630-mRNA-1:cds;Parent=Msa1255630-mRNA-1 |
chr8_2 | CDS | 54429589 | 54429634 | 54429589 | ID=Msa1255630-mRNA-1:cds;Parent=Msa1255630-mRNA-1 |
chr8_2 | CDS | 54430037 | 54430106 | 54430037 | ID=Msa1255630-mRNA-1:cds;Parent=Msa1255630-mRNA-1 |
chr8_2 | CDS | 54430693 | 54430776 | 54430693 | ID=Msa1255630-mRNA-1:cds;Parent=Msa1255630-mRNA-1 |
chr8_2 | CDS | 54430906 | 54431022 | 54430906 | ID=Msa1255630-mRNA-1:cds;Parent=Msa1255630-mRNA-1 |
chr8_2 | CDS | 54431415 | 54431891 | 54431415 | ID=Msa1255630-mRNA-1:cds;Parent=Msa1255630-mRNA-1 |
chr8_2 | CDS | 54432062 | 54432562 | 54432062 | ID=Msa1255630-mRNA-1:cds;Parent=Msa1255630-mRNA-1 |
chr8_2 | CDS | 54432650 | 54432709 | 54432650 | ID=Msa1255630-mRNA-1:cds;Parent=Msa1255630-mRNA-1 |
chr8_2 | CDS | 54432802 | 54432888 | 54432802 | ID=Msa1255630-mRNA-1:cds;Parent=Msa1255630-mRNA-1 |
chr8_2 | CDS | 54433201 | 54433329 | 54433201 | ID=Msa1255630-mRNA-1:cds;Parent=Msa1255630-mRNA-1 |
chr8_2 | CDS | 54433550 | 54433849 | 54433550 | ID=Msa1255630-mRNA-1:cds;Parent=Msa1255630-mRNA-1 |
chr8_2 | three_prime_UTR | 54433850 | 54434281 | 54433850 | ID=Msa1255630-mRNA-1:three_prime_utr;Parent=Msa1255630-mRNA-1 |
Gene Sequence |
Protein sequence |