Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256420 | GAU12528.1 | 60.632 | 348 | 98 | 5 | 1 | 311 | 70 | 415 | 9.80e-127 | 395 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256420 | sp|Q9FLW0|Y5241_ARATH | 32.075 | 371 | 160 | 13 | 5 | 314 | 82 | 421 | 6.10e-33 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256420 | A0A2Z6M2G6 | 60.632 | 348 | 98 | 5 | 1 | 311 | 70 | 415 | 4.68e-127 | 395 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0618430 | Msa1256420 | 0.803643 | 3.160368e-49 | -8.615850e-47 |
| Msa1204450 | Msa1256420 | 0.811944 | 5.432471e-51 | -8.615850e-47 |
| Msa1204460 | Msa1256420 | 0.903049 | 5.179354e-79 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256420 | MtrunA17_Chr4g0053521 | 61.080 | 352 | 94 | 5 | 1 | 311 | 76 | 425 | 2.38e-121 | 383 |
| Msa1256420 | MtrunA17_Chr4g0053521 | 59.394 | 330 | 91 | 6 | 3 | 292 | 634 | 960 | 2.89e-108 | 347 |
| Msa1256420 | MtrunA17_Chr4g0053521 | 44.262 | 122 | 53 | 4 | 281 | 394 | 1288 | 1402 | 1.23e-18 | 88.6 |
| Msa1256420 | MtrunA17_Chr4g0053571 | 60.704 | 341 | 89 | 8 | 3 | 302 | 78 | 414 | 4.71e-119 | 366 |
| Msa1256420 | MtrunA17_Chr4g0053571 | 81.633 | 98 | 18 | 0 | 315 | 412 | 753 | 850 | 2.93e-45 | 167 |
| Msa1256420 | MtrunA17_Chr4g0053561 | 59.688 | 320 | 107 | 5 | 3 | 302 | 76 | 393 | 1.95e-113 | 350 |
| Msa1256420 | MtrunA17_Chr4g0053561 | 85.870 | 92 | 13 | 0 | 315 | 406 | 696 | 787 | 2.36e-44 | 164 |
| Msa1256420 | MtrunA17_Chr4g0053601 | 66.412 | 131 | 43 | 1 | 101 | 231 | 1 | 130 | 2.86e-54 | 177 |
| Msa1256420 | MtrunA17_Chr4g0053591 | 88.889 | 90 | 10 | 0 | 317 | 406 | 406 | 495 | 1.42e-45 | 164 |
| Msa1256420 | MtrunA17_Chr4g0053591 | 64.000 | 75 | 22 | 2 | 245 | 314 | 2 | 76 | 1.02e-19 | 91.3 |
| Msa1256420 | MtrunA17_Chr6g0468691 | 32.609 | 368 | 170 | 14 | 3 | 314 | 77 | 422 | 1.79e-36 | 141 |
| Msa1256420 | MtrunA17_Chr1g0202711 | 29.589 | 365 | 183 | 10 | 4 | 316 | 95 | 437 | 4.33e-36 | 140 |
| Msa1256420 | MtrunA17_Chr4g0061081 | 33.448 | 290 | 152 | 7 | 6 | 285 | 95 | 353 | 1.76e-32 | 130 |
| Msa1256420 | MtrunA17_Chr2g0327671 | 31.953 | 338 | 163 | 10 | 3 | 291 | 83 | 402 | 1.71e-29 | 121 |
| Msa1256420 | MtrunA17_Chr8g0361611 | 30.029 | 343 | 177 | 10 | 3 | 305 | 82 | 401 | 1.93e-28 | 117 |
| Msa1256420 | MtrunA17_Chr7g0248161 | 29.940 | 334 | 159 | 13 | 4 | 281 | 75 | 389 | 2.15e-28 | 116 |
| Msa1256420 | MtrunA17_Chr4g0030441 | 30.675 | 326 | 161 | 9 | 3 | 281 | 84 | 391 | 5.05e-27 | 114 |
| Msa1256420 | MtrunA17_Chr8g0352381 | 29.052 | 327 | 173 | 10 | 1 | 281 | 108 | 421 | 1.87e-24 | 106 |
| Msa1256420 | MtrunA17_Chr2g0318301 | 28.660 | 321 | 169 | 10 | 5 | 281 | 81 | 385 | 2.72e-23 | 102 |
| Msa1256420 | MtrunA17_Chr4g0053611 | 82.456 | 57 | 10 | 0 | 6 | 62 | 84 | 140 | 6.12e-23 | 94.0 |
| Msa1256420 | MtrunA17_Chr7g0274261 | 30.292 | 274 | 161 | 11 | 6 | 268 | 89 | 343 | 4.79e-20 | 92.8 |
| Msa1256420 | MtrunA17_Chr1g0190581 | 31.727 | 249 | 142 | 11 | 6 | 243 | 78 | 309 | 7.52e-20 | 92.0 |
| Msa1256420 | MtrunA17_Chr5g0420151 | 32.743 | 226 | 124 | 10 | 1 | 214 | 85 | 294 | 4.50e-17 | 83.6 |
| Msa1256420 | MtrunA17_Chr7g0245131 | 29.297 | 256 | 151 | 11 | 1 | 243 | 77 | 315 | 8.80e-17 | 82.8 |
| Msa1256420 | MtrunA17_Chr2g0292501 | 29.870 | 231 | 126 | 8 | 5 | 218 | 81 | 292 | 1.66e-16 | 82.0 |
| Msa1256420 | MtrunA17_Chr1g0165521 | 25.000 | 356 | 163 | 16 | 3 | 302 | 82 | 389 | 1.68e-11 | 66.2 |
| Msa1256420 | MtrunA17_Chr7g0219691 | 27.273 | 275 | 171 | 13 | 6 | 262 | 93 | 356 | 3.93e-11 | 65.1 |
| Msa1256420 | MtrunA17_Chr7g0219601 | 24.490 | 392 | 199 | 16 | 6 | 314 | 90 | 467 | 7.50e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256420 | AT5G24010.1 | 32.075 | 371 | 160 | 13 | 5 | 314 | 82 | 421 | 6.20e-34 | 134 |
| Msa1256420 | AT2G23200.1 | 31.940 | 335 | 143 | 12 | 5 | 286 | 87 | 389 | 3.84e-30 | 123 |
| Msa1256420 | AT4G00300.1 | 29.762 | 336 | 170 | 12 | 5 | 286 | 80 | 403 | 1.30e-29 | 120 |
| Msa1256420 | AT5G61350.1 | 30.796 | 289 | 167 | 11 | 5 | 289 | 87 | 346 | 5.47e-26 | 111 |
| Msa1256420 | AT4G39110.1 | 28.659 | 328 | 170 | 9 | 3 | 281 | 104 | 416 | 2.45e-24 | 106 |
| Msa1256420 | AT5G59700.1 | 27.056 | 377 | 190 | 14 | 3 | 316 | 74 | 428 | 5.03e-23 | 102 |
| Msa1256420 | AT2G21480.1 | 27.576 | 330 | 175 | 9 | 1 | 281 | 101 | 415 | 5.72e-23 | 102 |
| Msa1256420 | AT5G54380.1 | 28.793 | 323 | 169 | 9 | 5 | 281 | 80 | 387 | 1.86e-22 | 100 |
| Msa1256420 | AT3G46290.1 | 29.429 | 333 | 165 | 12 | 3 | 286 | 74 | 385 | 1.35e-21 | 97.8 |
| Msa1256420 | AT2G39360.1 | 32.110 | 218 | 116 | 8 | 3 | 213 | 71 | 263 | 1.55e-19 | 91.7 |
| Msa1256420 | AT5G39000.1 | 27.429 | 350 | 163 | 15 | 6 | 286 | 83 | 410 | 9.38e-19 | 89.4 |
| Msa1256420 | AT5G39020.1 | 30.159 | 252 | 141 | 10 | 6 | 243 | 80 | 310 | 5.86e-18 | 86.7 |
| Msa1256420 | AT5G39030.1 | 28.710 | 310 | 163 | 14 | 1 | 286 | 74 | 349 | 9.84e-18 | 86.3 |
| Msa1256420 | AT5G39030.2 | 28.710 | 310 | 163 | 14 | 1 | 286 | 68 | 343 | 1.12e-17 | 85.9 |
| Msa1256420 | AT1G30570.1 | 28.163 | 245 | 140 | 7 | 3 | 227 | 80 | 308 | 1.09e-15 | 79.7 |
| Msa1256420 | AT3G51550.1 | 30.973 | 226 | 128 | 9 | 1 | 214 | 83 | 292 | 3.60e-14 | 75.1 |
Find 73 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATAAAGTATCAATATTTC+TGG | 0.166588 | 8_2:+56354350 | None:intergenic |
| TTGATACTTTATCGAGAAAA+TGG | 0.216656 | 8_2:-56354341 | Msa1256420:CDS |
| GTCGATACTTATCTAATTAT+AGG | 0.233175 | 8_2:-56354437 | Msa1256420:CDS |
| GTGGTTCGTTCCGATGATTC+TGG | 0.265252 | 8_2:-56353960 | Msa1256420:CDS |
| GCAGTTTGATAAATAATATC+TGG | 0.290669 | 8_2:+56354195 | None:intergenic |
| TCGATACTTATCTAATTATA+GGG | 0.306393 | 8_2:-56354436 | Msa1256420:CDS |
| CGTACCATGTAGGTGTTGTT+TGG | 0.333074 | 8_2:+56354741 | None:intergenic |
| ACCACAAAATCATAATAATA+AGG | 0.333737 | 8_2:+56353978 | None:intergenic |
| AAATTCAACGTTTCTGTTCC+CGG | 0.339246 | 8_2:-56354672 | Msa1256420:CDS |
| GTGGTGGTGGTTTCAATTCT+CGG | 0.348818 | 8_2:-56353804 | Msa1256420:CDS |
| ATGATAGTATATGACGAAAT+AGG | 0.355536 | 8_2:-56354023 | Msa1256420:CDS |
| GCAATATATTGATTTGAATC+TGG | 0.357246 | 8_2:+56354219 | None:intergenic |
| AATGGAAAATTCTTGCAGTT+TGG | 0.378288 | 8_2:+56354793 | None:intergenic |
| GCAGGTAAACGCTGAACTTT+AGG | 0.379022 | 8_2:+56352670 | None:intergenic |
| GTGAAGAGAATGAAAAGAAA+TGG | 0.389396 | 8_2:+56354715 | None:intergenic |
| GAAGTGGATGGCACATCTAC+TGG | 0.393407 | 8_2:-56352631 | Msa1256420:CDS |
| CAGTTTCTCCTCCGACGTTA+AGG | 0.429547 | 8_2:+56354376 | None:intergenic |
| GGTTGATGTGTTGTGGGACT+TGG | 0.430220 | 8_2:-56352764 | Msa1256420:CDS |
| TTTGCAGTGGAAAGGTTAGT+TGG | 0.435305 | 8_2:+56354693 | None:intergenic |
| AGTAAACTGGTACGAAGATT+CGG | 0.439498 | 8_2:+56354770 | None:intergenic |
| ATTGAATCGCCCAATTGAAT+CGG | 0.443574 | 8_2:+56354476 | None:intergenic |
| GAATCGGGGATTAAAAGAAC+AGG | 0.444089 | 8_2:+56354492 | None:intergenic |
| GTACCATGTAGGTGTTGTTT+GGG | 0.451814 | 8_2:+56354742 | None:intergenic |
| CTAACGATTTAAGCATAAGT+TGG | 0.452424 | 8_2:-56354152 | Msa1256420:CDS |
| CGATGCTAGATAGTATTTCA+TGG | 0.454552 | 8_2:-56352576 | Msa1256420:CDS |
| TTGAATCGCCCAATTGAATC+GGG | 0.457093 | 8_2:+56354477 | None:intergenic |
| TTCAATTACAACGATTCTAC+TGG | 0.479886 | 8_2:-56354459 | Msa1256420:CDS |
| GCAGTTTGGTAGAGAGATGA+AGG | 0.490787 | 8_2:+56354807 | None:intergenic |
| AATTCTCGGAGGTTTAGTTC+TGG | 0.490991 | 8_2:-56353790 | Msa1256420:intron |
| TGTTTGGGAAGGTAGTAAAC+TGG | 0.492724 | 8_2:+56354757 | None:intergenic |
| CACAACACATCAACCGTTGT+TGG | 0.496209 | 8_2:+56352772 | None:intergenic |
| TTAGTTATATAAATGTCATC+TGG | 0.498378 | 8_2:+56354315 | None:intergenic |
| GATTAGTCTTCCTGTGGTGG+TGG | 0.504568 | 8_2:-56353817 | Msa1256420:CDS |
| ATGAAAGTGATTGATCCATC+AGG | 0.510783 | 8_2:-56353876 | Msa1256420:CDS |
| CTTCAATAGGCCAGAATCAT+CGG | 0.519902 | 8_2:+56353950 | None:intergenic |
| CTTCCCAAACAACACCTACA+TGG | 0.519905 | 8_2:-56354745 | Msa1256420:CDS |
| TACAGGAGTATGGTTGTGAT+AGG | 0.520282 | 8_2:-56352795 | Msa1256420:intron |
| ATTTCATGGGAAGCAAATCA+AGG | 0.547575 | 8_2:-56352562 | Msa1256420:CDS |
| GAAGATTAGTCTTCCTGTGG+TGG | 0.547833 | 8_2:-56353820 | Msa1256420:CDS |
| GATGCTAGATAGTATTTCAT+GGG | 0.548983 | 8_2:-56352575 | Msa1256420:CDS |
| TTGATTTGAATCTGGACCAT+CGG | 0.556569 | 8_2:+56354227 | None:intergenic |
| TCTAAGTTAACTAAACCTGA+TGG | 0.558585 | 8_2:+56353861 | None:intergenic |
| AGAATTGAAACCACCACCAC+AGG | 0.559300 | 8_2:+56353807 | None:intergenic |
| CAACAACGGTTGATGTGTTG+TGG | 0.562607 | 8_2:-56352771 | Msa1256420:CDS |
| CATGTAGGTGTTGTTTGGGA+AGG | 0.568609 | 8_2:+56354746 | None:intergenic |
| AACAACGGTTGATGTGTTGT+GGG | 0.570612 | 8_2:-56352770 | Msa1256420:CDS |
| AAGTGGATGGCACATCTACT+GGG | 0.570896 | 8_2:-56352630 | Msa1256420:CDS |
| TACTTATCTAATTATAGGGG+CGG | 0.573305 | 8_2:-56354432 | Msa1256420:CDS |
| TCAGTCAGTGTAGACAGAGC+AGG | 0.584504 | 8_2:+56352652 | None:intergenic |
| ACTGGTACGAAGATTCGGAA+TGG | 0.590962 | 8_2:+56354775 | None:intergenic |
| TCTGTCTACACTGACTGAAG+TGG | 0.605899 | 8_2:-56352647 | Msa1256420:CDS |
| TTTGAAGATTAGTCTTCCTG+TGG | 0.607512 | 8_2:-56353823 | Msa1256420:CDS |
| CAACTTGCAAGTGTCTCAAG+TGG | 0.608158 | 8_2:-56352530 | Msa1256420:CDS |
| CGATACTTATCTAATTATAG+GGG | 0.612644 | 8_2:-56354435 | Msa1256420:CDS |
| GAAATGGAAACGTACCATGT+AGG | 0.613092 | 8_2:+56354731 | None:intergenic |
| ATAGTATATGACGAAATAGG+TGG | 0.616051 | 8_2:-56354020 | Msa1256420:CDS |
| CTTGCAAGTGTCTCAAGTGG+AGG | 0.621580 | 8_2:-56352527 | Msa1256420:CDS |
| CTGCTAGAACTGTCCTCATG+TGG | 0.622827 | 8_2:+56352715 | None:intergenic |
| TATAGCATTAACAAACGCGA+AGG | 0.635159 | 8_2:+56354530 | None:intergenic |
| TTTCTCCTCCGACGTTAAGG+CGG | 0.638143 | 8_2:+56354379 | None:intergenic |
| TAGTATATGACGAAATAGGT+GGG | 0.646999 | 8_2:-56354019 | Msa1256420:CDS |
| ACAAAACACCGCCTTAACGT+CGG | 0.655567 | 8_2:-56354387 | Msa1256420:CDS |
| GGATGGCACATCTACTGGGA+GGG | 0.663439 | 8_2:-56352626 | Msa1256420:CDS |
| TGAATCGCCCAATTGAATCG+GGG | 0.666832 | 8_2:+56354478 | None:intergenic |
| AAACACCGCCTTAACGTCGG+AGG | 0.677354 | 8_2:-56354384 | Msa1256420:CDS |
| GTGGTGGTTTCAATTCTCGG+AGG | 0.684245 | 8_2:-56353801 | Msa1256420:CDS |
| ACTGCAGATGATGAGTCCGA+TGG | 0.684779 | 8_2:-56354243 | Msa1256420:CDS |
| GGTGGGCTATACATGTTGCG+TGG | 0.700728 | 8_2:-56354002 | Msa1256420:CDS |
| TGGATGGCACATCTACTGGG+AGG | 0.701609 | 8_2:-56352627 | Msa1256420:CDS |
| TCTACACTGACTGAAGTGGA+TGG | 0.701827 | 8_2:-56352643 | Msa1256420:CDS |
| TGGTTGTGATAGGCCAACAA+CGG | 0.708958 | 8_2:-56352785 | Msa1256420:CDS |
| AATCGGGGATTAAAAGAACA+GGG | 0.712103 | 8_2:+56354493 | None:intergenic |
| GCTTCAGAGAGAACCACATG+AGG | 0.714405 | 8_2:-56352728 | Msa1256420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAATGTCATAAATTA+AGG | + | chr8_2:56353226-56353245 | None:intergenic | 10.0% |
| !! | ATTAAAAATGTCATAAATTA+AGG | + | chr8_2:56353226-56353245 | None:intergenic | 10.0% |
| !!! | TTTATGACATTTTTAATCAA+CGG | - | chr8_2:56353229-56353248 | Msa1256420:intron | 15.0% |
| !!! | TTTATGACATTTTTAATCAA+CGG | - | chr8_2:56353229-56353248 | Msa1256420:intron | 15.0% |
| !! | TCGATACTTATCTAATTATA+GGG | - | chr8_2:56352884-56352903 | Msa1256420:intron | 20.0% |
| !! | TTAGTTATATAAATGTCATC+TGG | + | chr8_2:56353008-56353027 | None:intergenic | 20.0% |
| !!! | GCTCAAAATAGTTTATTTTT+TGG | - | chr8_2:56353038-56353057 | Msa1256420:intron | 20.0% |
| !!! | CAAAATAGTTTATTTTTTGG+AGG | - | chr8_2:56353041-56353060 | Msa1256420:intron | 20.0% |
| !!! | TCCTTATTATTATGATTTTG+TGG | - | chr8_2:56353341-56353360 | Msa1256420:intron | 20.0% |
| !! | ACCACAAAATCATAATAATA+AGG | + | chr8_2:56353345-56353364 | None:intergenic | 20.0% |
| !!! | TTCTTTGGATTAGTAAAATA+AGG | - | chr8_2:56353574-56353593 | Msa1256420:intron | 20.0% |
| !! | TTAGTAAAATAAGGAAACAA+AGG | - | chr8_2:56353583-56353602 | Msa1256420:intron | 20.0% |
| !!! | AAATCTGATGTTTATTCTTT+TGG | - | chr8_2:56354308-56354327 | Msa1256420:CDS | 20.0% |
| !!! | AATCTGATGTTTATTCTTTT+GGG | - | chr8_2:56354309-56354328 | Msa1256420:CDS | 20.0% |
| !! | TCGATACTTATCTAATTATA+GGG | - | chr8_2:56352884-56352903 | Msa1256420:intron | 20.0% |
| !! | TTAGTTATATAAATGTCATC+TGG | + | chr8_2:56353008-56353027 | None:intergenic | 20.0% |
| !!! | GCTCAAAATAGTTTATTTTT+TGG | - | chr8_2:56353038-56353057 | Msa1256420:intron | 20.0% |
| !!! | CAAAATAGTTTATTTTTTGG+AGG | - | chr8_2:56353041-56353060 | Msa1256420:intron | 20.0% |
| !!! | TCCTTATTATTATGATTTTG+TGG | - | chr8_2:56353341-56353360 | Msa1256420:intron | 20.0% |
| !! | ACCACAAAATCATAATAATA+AGG | + | chr8_2:56353345-56353364 | None:intergenic | 20.0% |
| !!! | TTCTTTGGATTAGTAAAATA+AGG | - | chr8_2:56353574-56353593 | Msa1256420:intron | 20.0% |
| !! | TTAGTAAAATAAGGAAACAA+AGG | - | chr8_2:56353583-56353602 | Msa1256420:intron | 20.0% |
| !!! | AAATCTGATGTTTATTCTTT+TGG | - | chr8_2:56354308-56354327 | Msa1256420:CDS | 20.0% |
| !!! | AATCTGATGTTTATTCTTTT+GGG | - | chr8_2:56354309-56354328 | Msa1256420:CDS | 20.0% |
| ! | GTCGATACTTATCTAATTAT+AGG | - | chr8_2:56352883-56352902 | Msa1256420:intron | 25.0% |
| ! | CGATACTTATCTAATTATAG+GGG | - | chr8_2:56352885-56352904 | Msa1256420:intron | 25.0% |
| !! | CGATAAAGTATCAATATTTC+TGG | + | chr8_2:56352973-56352992 | None:intergenic | 25.0% |
| ! | TTGATACTTTATCGAGAAAA+TGG | - | chr8_2:56352979-56352998 | Msa1256420:intron | 25.0% |
| !!! | GCAATATATTGATTTGAATC+TGG | + | chr8_2:56353104-56353123 | None:intergenic | 25.0% |
| ! | GCAGTTTGATAAATAATATC+TGG | + | chr8_2:56353128-56353147 | None:intergenic | 25.0% |
| ! | ATGATAGTATATGACGAAAT+AGG | - | chr8_2:56353297-56353316 | Msa1256420:intron | 25.0% |
| !!! | GTTTTAAAGTGATCTTCAAT+AGG | + | chr8_2:56353386-56353405 | None:intergenic | 25.0% |
| !!! | TGGTTTTGGAAATGTTTATA+AGG | - | chr8_2:56353794-56353813 | Msa1256420:CDS | 25.0% |
| !!! | GGTTTTGGAAATGTTTATAA+GGG | - | chr8_2:56353795-56353814 | Msa1256420:CDS | 25.0% |
| !! | ATCTGATGTTTATTCTTTTG+GGG | - | chr8_2:56354310-56354329 | Msa1256420:CDS | 25.0% |
| ! | GTCGATACTTATCTAATTAT+AGG | - | chr8_2:56352883-56352902 | Msa1256420:intron | 25.0% |
| ! | CGATACTTATCTAATTATAG+GGG | - | chr8_2:56352885-56352904 | Msa1256420:intron | 25.0% |
| !! | CGATAAAGTATCAATATTTC+TGG | + | chr8_2:56352973-56352992 | None:intergenic | 25.0% |
| ! | TTGATACTTTATCGAGAAAA+TGG | - | chr8_2:56352979-56352998 | Msa1256420:intron | 25.0% |
| !!! | GCAATATATTGATTTGAATC+TGG | + | chr8_2:56353104-56353123 | None:intergenic | 25.0% |
| ! | GCAGTTTGATAAATAATATC+TGG | + | chr8_2:56353128-56353147 | None:intergenic | 25.0% |
| ! | ATGATAGTATATGACGAAAT+AGG | - | chr8_2:56353297-56353316 | Msa1256420:intron | 25.0% |
| !!! | GTTTTAAAGTGATCTTCAAT+AGG | + | chr8_2:56353386-56353405 | None:intergenic | 25.0% |
| !!! | TGGTTTTGGAAATGTTTATA+AGG | - | chr8_2:56353794-56353813 | Msa1256420:CDS | 25.0% |
| !!! | GGTTTTGGAAATGTTTATAA+GGG | - | chr8_2:56353795-56353814 | Msa1256420:CDS | 25.0% |
| !! | ATCTGATGTTTATTCTTTTG+GGG | - | chr8_2:56354310-56354329 | Msa1256420:CDS | 25.0% |
| AATGGAAAATTCTTGCAGTT+TGG | + | chr8_2:56352530-56352549 | None:intergenic | 30.0% | |
| GTGAAGAGAATGAAAAGAAA+TGG | + | chr8_2:56352608-56352627 | None:intergenic | 30.0% | |
| ! | ATTTTGTAACAGAGAGAAAC+CGG | + | chr8_2:56352670-56352689 | None:intergenic | 30.0% |
| ! | ACGTAGTACTCTTTTACTAA+AGG | + | chr8_2:56352720-56352739 | None:intergenic | 30.0% |
| ! | TGTGAAAGTGATTTTGAATC+TGG | + | chr8_2:56352757-56352776 | None:intergenic | 30.0% |
| ! | TTTTAATCCCCGATTCAATT+GGG | - | chr8_2:56352835-56352854 | Msa1256420:intron | 30.0% |
| TTCAATTACAACGATTCTAC+TGG | - | chr8_2:56352861-56352880 | Msa1256420:intron | 30.0% | |
| TACTTATCTAATTATAGGGG+CGG | - | chr8_2:56352888-56352907 | Msa1256420:intron | 30.0% | |
| !! | AAACTATTTTGAGCGTTAAG+TGG | + | chr8_2:56353032-56353051 | None:intergenic | 30.0% |
| ACTGCTAAAGAGAGTAAAAA+CGG | - | chr8_2:56353143-56353162 | Msa1256420:intron | 30.0% | |
| CTAACGATTTAAGCATAAGT+TGG | - | chr8_2:56353168-56353187 | Msa1256420:intron | 30.0% | |
| CCTAACTGTCATAAATTATG+AGG | + | chr8_2:56353275-56353294 | None:intergenic | 30.0% | |
| CCTCATAATTTATGACAGTT+AGG | - | chr8_2:56353272-56353291 | Msa1256420:intron | 30.0% | |
| ATAGTATATGACGAAATAGG+TGG | - | chr8_2:56353300-56353319 | Msa1256420:intron | 30.0% | |
| TAGTATATGACGAAATAGGT+GGG | - | chr8_2:56353301-56353320 | Msa1256420:intron | 30.0% | |
| ! | AAAAACACGCTTAGAGTATT+AGG | + | chr8_2:56353408-56353427 | None:intergenic | 30.0% |
| !! | ACTCTAAGCGTGTTTTTAAA+CGG | - | chr8_2:56353411-56353430 | Msa1256420:intron | 30.0% |
| TCTAAGTTAACTAAACCTGA+TGG | + | chr8_2:56353462-56353481 | None:intergenic | 30.0% | |
| !! | TTTAGTTCTGGTTTCTGTTA+TGG | - | chr8_2:56353542-56353561 | Msa1256420:intron | 30.0% |
| !!! | TTATGGTGGTTTTGTTTCTT+TGG | - | chr8_2:56353559-56353578 | Msa1256420:intron | 30.0% |
| ACTTATGGAAAAACAACTCA+AGG | - | chr8_2:56353672-56353691 | Msa1256420:intron | 30.0% | |
| ! | CTTTTACCTAACATAAACCT+TGG | - | chr8_2:56353699-56353718 | Msa1256420:intron | 30.0% |
| TTTGATGCGAATAGGATAAT+TGG | - | chr8_2:56353765-56353784 | Msa1256420:intron | 30.0% | |
| ATATCATGAATTTCAAACCG+AGG | - | chr8_2:56353878-56353897 | Msa1256420:CDS | 30.0% | |
| TTCATCACAATACCCTATTA+AGG | + | chr8_2:56353943-56353962 | None:intergenic | 30.0% | |
| !! | TAATAGGGTATTGTGATGAA+AGG | - | chr8_2:56353943-56353962 | Msa1256420:CDS | 30.0% |
| GATACTTGTTTATGAGTACA+TGG | - | chr8_2:56353974-56353993 | Msa1256420:CDS | 30.0% | |
| GTTTATGAGTACATGGAAAA+TGG | - | chr8_2:56353981-56354000 | Msa1256420:CDS | 30.0% | |
| CAAGTCAAACAAGACAAATT+TGG | + | chr8_2:56354032-56354051 | None:intergenic | 30.0% | |
| !! | CAAATTTGTCTTGTTTGACT+TGG | - | chr8_2:56354030-56354049 | Msa1256420:intron | 30.0% |
| ACATAAGAATGTTCATCAAG+AGG | + | chr8_2:56354218-56354237 | None:intergenic | 30.0% | |
| ! | TGTTGTGATCTAAAGTAATC+AGG | + | chr8_2:56354278-56354297 | None:intergenic | 30.0% |
| !! | TTGATTAATTTGTGCCTTGA+TGG | + | chr8_2:56354465-56354484 | None:intergenic | 30.0% |
| TAGAATATTTAGTGAGACTG+TGG | - | chr8_2:56354493-56354512 | Msa1256420:CDS | 30.0% | |
| GATGCTAGATAGTATTTCAT+GGG | - | chr8_2:56354745-56354764 | Msa1256420:CDS | 30.0% | |
| AATGGAAAATTCTTGCAGTT+TGG | + | chr8_2:56352530-56352549 | None:intergenic | 30.0% | |
| GTGAAGAGAATGAAAAGAAA+TGG | + | chr8_2:56352608-56352627 | None:intergenic | 30.0% | |
| ! | ATTTTGTAACAGAGAGAAAC+CGG | + | chr8_2:56352670-56352689 | None:intergenic | 30.0% |
| ! | ACGTAGTACTCTTTTACTAA+AGG | + | chr8_2:56352720-56352739 | None:intergenic | 30.0% |
| ! | TGTGAAAGTGATTTTGAATC+TGG | + | chr8_2:56352757-56352776 | None:intergenic | 30.0% |
| ! | TTTTAATCCCCGATTCAATT+GGG | - | chr8_2:56352835-56352854 | Msa1256420:intron | 30.0% |
| TTCAATTACAACGATTCTAC+TGG | - | chr8_2:56352861-56352880 | Msa1256420:intron | 30.0% | |
| TACTTATCTAATTATAGGGG+CGG | - | chr8_2:56352888-56352907 | Msa1256420:intron | 30.0% | |
| !! | AAACTATTTTGAGCGTTAAG+TGG | + | chr8_2:56353032-56353051 | None:intergenic | 30.0% |
| ACTGCTAAAGAGAGTAAAAA+CGG | - | chr8_2:56353143-56353162 | Msa1256420:intron | 30.0% | |
| CTAACGATTTAAGCATAAGT+TGG | - | chr8_2:56353168-56353187 | Msa1256420:intron | 30.0% | |
| CCTAACTGTCATAAATTATG+AGG | + | chr8_2:56353275-56353294 | None:intergenic | 30.0% | |
| CCTCATAATTTATGACAGTT+AGG | - | chr8_2:56353272-56353291 | Msa1256420:intron | 30.0% | |
| ATAGTATATGACGAAATAGG+TGG | - | chr8_2:56353300-56353319 | Msa1256420:intron | 30.0% | |
| TAGTATATGACGAAATAGGT+GGG | - | chr8_2:56353301-56353320 | Msa1256420:intron | 30.0% | |
| ! | AAAAACACGCTTAGAGTATT+AGG | + | chr8_2:56353408-56353427 | None:intergenic | 30.0% |
| !! | ACTCTAAGCGTGTTTTTAAA+CGG | - | chr8_2:56353411-56353430 | Msa1256420:intron | 30.0% |
| TCTAAGTTAACTAAACCTGA+TGG | + | chr8_2:56353462-56353481 | None:intergenic | 30.0% | |
| !! | TTTAGTTCTGGTTTCTGTTA+TGG | - | chr8_2:56353542-56353561 | Msa1256420:intron | 30.0% |
| !!! | TTATGGTGGTTTTGTTTCTT+TGG | - | chr8_2:56353559-56353578 | Msa1256420:intron | 30.0% |
| ACTTATGGAAAAACAACTCA+AGG | - | chr8_2:56353672-56353691 | Msa1256420:intron | 30.0% | |
| ! | CTTTTACCTAACATAAACCT+TGG | - | chr8_2:56353699-56353718 | Msa1256420:intron | 30.0% |
| TTTGATGCGAATAGGATAAT+TGG | - | chr8_2:56353765-56353784 | Msa1256420:intron | 30.0% | |
| ATATCATGAATTTCAAACCG+AGG | - | chr8_2:56353878-56353897 | Msa1256420:CDS | 30.0% | |
| TTCATCACAATACCCTATTA+AGG | + | chr8_2:56353943-56353962 | None:intergenic | 30.0% | |
| !! | TAATAGGGTATTGTGATGAA+AGG | - | chr8_2:56353943-56353962 | Msa1256420:CDS | 30.0% |
| GATACTTGTTTATGAGTACA+TGG | - | chr8_2:56353974-56353993 | Msa1256420:CDS | 30.0% | |
| GTTTATGAGTACATGGAAAA+TGG | - | chr8_2:56353981-56354000 | Msa1256420:CDS | 30.0% | |
| CAAGTCAAACAAGACAAATT+TGG | + | chr8_2:56354032-56354051 | None:intergenic | 30.0% | |
| !! | CAAATTTGTCTTGTTTGACT+TGG | - | chr8_2:56354030-56354049 | Msa1256420:intron | 30.0% |
| ACATAAGAATGTTCATCAAG+AGG | + | chr8_2:56354218-56354237 | None:intergenic | 30.0% | |
| ! | TGTTGTGATCTAAAGTAATC+AGG | + | chr8_2:56354278-56354297 | None:intergenic | 30.0% |
| !! | TTGATTAATTTGTGCCTTGA+TGG | + | chr8_2:56354465-56354484 | None:intergenic | 30.0% |
| TAGAATATTTAGTGAGACTG+TGG | - | chr8_2:56354493-56354512 | Msa1256420:CDS | 30.0% | |
| GATGCTAGATAGTATTTCAT+GGG | - | chr8_2:56354745-56354764 | Msa1256420:CDS | 30.0% | |
| AGTAAACTGGTACGAAGATT+CGG | + | chr8_2:56352553-56352572 | None:intergenic | 35.0% | |
| ! | AGAAACGTTGAATTTTGCAG+TGG | + | chr8_2:56352643-56352662 | None:intergenic | 35.0% |
| AAATTCAACGTTTCTGTTCC+CGG | - | chr8_2:56352648-56352667 | Msa1256420:CDS | 35.0% | |
| ! | TTTTGTAACAGAGAGAAACC+GGG | + | chr8_2:56352669-56352688 | None:intergenic | 35.0% |
| ! | TTTTACTAAAGGAGACTTGG+TGG | + | chr8_2:56352709-56352728 | None:intergenic | 35.0% |
| ! | CTCTTTTACTAAAGGAGACT+TGG | + | chr8_2:56352712-56352731 | None:intergenic | 35.0% |
| TATAGCATTAACAAACGCGA+AGG | + | chr8_2:56352793-56352812 | None:intergenic | 35.0% | |
| AATCGGGGATTAAAAGAACA+GGG | + | chr8_2:56352830-56352849 | None:intergenic | 35.0% | |
| ! | CTTTTAATCCCCGATTCAAT+TGG | - | chr8_2:56352834-56352853 | Msa1256420:intron | 35.0% |
| ATTGAATCGCCCAATTGAAT+CGG | + | chr8_2:56352847-56352866 | None:intergenic | 35.0% | |
| ! | TTGATTTGAATCTGGACCAT+CGG | + | chr8_2:56353096-56353115 | None:intergenic | 35.0% |
| TGATCTATATTCTTCTCCAC+AGG | + | chr8_2:56353200-56353219 | None:intergenic | 35.0% | |
| !! | CTCTAAGCGTGTTTTTAAAC+GGG | - | chr8_2:56353412-56353431 | Msa1256420:intron | 35.0% |
| ATGAAAGTGATTGATCCATC+AGG | - | chr8_2:56353444-56353463 | Msa1256420:intron | 35.0% | |
| !! | TTTGAAGATTAGTCTTCCTG+TGG | - | chr8_2:56353497-56353516 | Msa1256420:intron | 35.0% |
| AACAAATCAGAATTCTCAGC+AGG | + | chr8_2:56353609-56353628 | None:intergenic | 35.0% | |
| ! | TGCTGAGAATTCTGATTTGT+TGG | - | chr8_2:56353608-56353627 | Msa1256420:intron | 35.0% |
| TCTCATTGCAGACTAACTTA+TGG | - | chr8_2:56353657-56353676 | Msa1256420:intron | 35.0% | |
| TGCGAATAGGATAATTGGAA+AGG | - | chr8_2:56353770-56353789 | Msa1256420:intron | 35.0% | |
| GCGAATAGGATAATTGGAAA+GGG | - | chr8_2:56353771-56353790 | Msa1256420:intron | 35.0% | |
| AATAGGATAATTGGAAAGGG+TGG | - | chr8_2:56353774-56353793 | Msa1256420:intron | 35.0% | |
| ! | ATAATTGGAAAGGGTGGTTT+TGG | - | chr8_2:56353780-56353799 | Msa1256420:intron | 35.0% |
| TATAAGGGAGTTCTCAAGAA+TGG | - | chr8_2:56353810-56353829 | Msa1256420:CDS | 35.0% | |
| TCTCAAGAATGGAATGAATG+TGG | - | chr8_2:56353821-56353840 | Msa1256420:CDS | 35.0% | |
| TGAATTTCAAACCGAGGTAA+TGG | - | chr8_2:56353884-56353903 | Msa1256420:CDS | 35.0% | |
| ATACACCTCGTTTCCTTAAT+AGG | - | chr8_2:56353927-56353946 | Msa1256420:CDS | 35.0% | |
| TACACCTCGTTTCCTTAATA+GGG | - | chr8_2:56353928-56353947 | Msa1256420:CDS | 35.0% | |
| AATACCCTATTAAGGAAACG+AGG | + | chr8_2:56353935-56353954 | None:intergenic | 35.0% | |
| CAAAGGCTTGAGATTTGTAT+TGG | - | chr8_2:56354056-56354075 | Msa1256420:intron | 35.0% | |
| CTCGTCAAGCAATATATTAG+TGG | + | chr8_2:56354150-56354169 | None:intergenic | 35.0% | |
| !!! | GTTGCTAAAGTTGCTGATTT+TGG | - | chr8_2:56354176-56354195 | Msa1256420:CDS | 35.0% |
| !!! | TTGCTGATTTTGGTCTTTCA+AGG | - | chr8_2:56354186-56354205 | Msa1256420:CDS | 35.0% |
| ! | ACACGTGTTAAAGGAACTTT+TGG | - | chr8_2:56354242-56354261 | Msa1256420:CDS | 35.0% |
| ! | CACGTGTTAAAGGAACTTTT+GGG | - | chr8_2:56354243-56354262 | Msa1256420:CDS | 35.0% |
| !! | TGATGTTTATTCTTTTGGGG+TGG | - | chr8_2:56354313-56354332 | Msa1256420:CDS | 35.0% |
| TCCAAGTGAACAAGTCAATT+TGG | - | chr8_2:56354382-56354401 | Msa1256420:CDS | 35.0% | |
| AACAAGTCAATTTGGCTGAA+TGG | - | chr8_2:56354390-56354409 | Msa1256420:CDS | 35.0% | |
| ACAAGTCAATTTGGCTGAAT+GGG | - | chr8_2:56354391-56354410 | Msa1256420:CDS | 35.0% | |
| GATTGCTTTGCAAAGACAAA+GGG | - | chr8_2:56354414-56354433 | Msa1256420:CDS | 35.0% | |
| GATCGTTGATATTTCCATCA+AGG | - | chr8_2:56354448-56354467 | Msa1256420:CDS | 35.0% | |
| GAAAAATGCTTACAGGAGTA+TGG | - | chr8_2:56354515-56354534 | Msa1256420:CDS | 35.0% | |
| CGATGCTAGATAGTATTTCA+TGG | - | chr8_2:56354744-56354763 | Msa1256420:CDS | 35.0% | |
| ATTTCATGGGAAGCAAATCA+AGG | - | chr8_2:56354758-56354777 | Msa1256420:CDS | 35.0% | |
| AGTAAACTGGTACGAAGATT+CGG | + | chr8_2:56352553-56352572 | None:intergenic | 35.0% | |
| ! | AGAAACGTTGAATTTTGCAG+TGG | + | chr8_2:56352643-56352662 | None:intergenic | 35.0% |
| AAATTCAACGTTTCTGTTCC+CGG | - | chr8_2:56352648-56352667 | Msa1256420:CDS | 35.0% | |
| ! | TTTTGTAACAGAGAGAAACC+GGG | + | chr8_2:56352669-56352688 | None:intergenic | 35.0% |
| ! | TTTTACTAAAGGAGACTTGG+TGG | + | chr8_2:56352709-56352728 | None:intergenic | 35.0% |
| ! | CTCTTTTACTAAAGGAGACT+TGG | + | chr8_2:56352712-56352731 | None:intergenic | 35.0% |
| TATAGCATTAACAAACGCGA+AGG | + | chr8_2:56352793-56352812 | None:intergenic | 35.0% | |
| AATCGGGGATTAAAAGAACA+GGG | + | chr8_2:56352830-56352849 | None:intergenic | 35.0% | |
| ! | CTTTTAATCCCCGATTCAAT+TGG | - | chr8_2:56352834-56352853 | Msa1256420:intron | 35.0% |
| ATTGAATCGCCCAATTGAAT+CGG | + | chr8_2:56352847-56352866 | None:intergenic | 35.0% | |
| ! | TTGATTTGAATCTGGACCAT+CGG | + | chr8_2:56353096-56353115 | None:intergenic | 35.0% |
| TGATCTATATTCTTCTCCAC+AGG | + | chr8_2:56353200-56353219 | None:intergenic | 35.0% | |
| !! | CTCTAAGCGTGTTTTTAAAC+GGG | - | chr8_2:56353412-56353431 | Msa1256420:intron | 35.0% |
| ATGAAAGTGATTGATCCATC+AGG | - | chr8_2:56353444-56353463 | Msa1256420:intron | 35.0% | |
| !! | TTTGAAGATTAGTCTTCCTG+TGG | - | chr8_2:56353497-56353516 | Msa1256420:intron | 35.0% |
| AACAAATCAGAATTCTCAGC+AGG | + | chr8_2:56353609-56353628 | None:intergenic | 35.0% | |
| ! | TGCTGAGAATTCTGATTTGT+TGG | - | chr8_2:56353608-56353627 | Msa1256420:intron | 35.0% |
| TCTCATTGCAGACTAACTTA+TGG | - | chr8_2:56353657-56353676 | Msa1256420:intron | 35.0% | |
| TGCGAATAGGATAATTGGAA+AGG | - | chr8_2:56353770-56353789 | Msa1256420:intron | 35.0% | |
| GCGAATAGGATAATTGGAAA+GGG | - | chr8_2:56353771-56353790 | Msa1256420:intron | 35.0% | |
| AATAGGATAATTGGAAAGGG+TGG | - | chr8_2:56353774-56353793 | Msa1256420:intron | 35.0% | |
| ! | ATAATTGGAAAGGGTGGTTT+TGG | - | chr8_2:56353780-56353799 | Msa1256420:intron | 35.0% |
| TATAAGGGAGTTCTCAAGAA+TGG | - | chr8_2:56353810-56353829 | Msa1256420:CDS | 35.0% | |
| TCTCAAGAATGGAATGAATG+TGG | - | chr8_2:56353821-56353840 | Msa1256420:CDS | 35.0% | |
| TGAATTTCAAACCGAGGTAA+TGG | - | chr8_2:56353884-56353903 | Msa1256420:CDS | 35.0% | |
| ATACACCTCGTTTCCTTAAT+AGG | - | chr8_2:56353927-56353946 | Msa1256420:CDS | 35.0% | |
| TACACCTCGTTTCCTTAATA+GGG | - | chr8_2:56353928-56353947 | Msa1256420:CDS | 35.0% | |
| AATACCCTATTAAGGAAACG+AGG | + | chr8_2:56353935-56353954 | None:intergenic | 35.0% | |
| CAAAGGCTTGAGATTTGTAT+TGG | - | chr8_2:56354056-56354075 | Msa1256420:intron | 35.0% | |
| CTCGTCAAGCAATATATTAG+TGG | + | chr8_2:56354150-56354169 | None:intergenic | 35.0% | |
| !!! | GTTGCTAAAGTTGCTGATTT+TGG | - | chr8_2:56354176-56354195 | Msa1256420:CDS | 35.0% |
| !!! | TTGCTGATTTTGGTCTTTCA+AGG | - | chr8_2:56354186-56354205 | Msa1256420:CDS | 35.0% |
| ! | ACACGTGTTAAAGGAACTTT+TGG | - | chr8_2:56354242-56354261 | Msa1256420:CDS | 35.0% |
| ! | CACGTGTTAAAGGAACTTTT+GGG | - | chr8_2:56354243-56354262 | Msa1256420:CDS | 35.0% |
| !! | TGATGTTTATTCTTTTGGGG+TGG | - | chr8_2:56354313-56354332 | Msa1256420:CDS | 35.0% |
| TCCAAGTGAACAAGTCAATT+TGG | - | chr8_2:56354382-56354401 | Msa1256420:CDS | 35.0% | |
| AACAAGTCAATTTGGCTGAA+TGG | - | chr8_2:56354390-56354409 | Msa1256420:CDS | 35.0% | |
| ACAAGTCAATTTGGCTGAAT+GGG | - | chr8_2:56354391-56354410 | Msa1256420:CDS | 35.0% | |
| GATTGCTTTGCAAAGACAAA+GGG | - | chr8_2:56354414-56354433 | Msa1256420:CDS | 35.0% | |
| GATCGTTGATATTTCCATCA+AGG | - | chr8_2:56354448-56354467 | Msa1256420:CDS | 35.0% | |
| GAAAAATGCTTACAGGAGTA+TGG | - | chr8_2:56354515-56354534 | Msa1256420:CDS | 35.0% | |
| CGATGCTAGATAGTATTTCA+TGG | - | chr8_2:56354744-56354763 | Msa1256420:CDS | 35.0% | |
| ATTTCATGGGAAGCAAATCA+AGG | - | chr8_2:56354758-56354777 | Msa1256420:CDS | 35.0% | |
| TGTTTGGGAAGGTAGTAAAC+TGG | + | chr8_2:56352566-56352585 | None:intergenic | 40.0% | |
| !! | GTACCATGTAGGTGTTGTTT+GGG | + | chr8_2:56352581-56352600 | None:intergenic | 40.0% |
| GAAATGGAAACGTACCATGT+AGG | + | chr8_2:56352592-56352611 | None:intergenic | 40.0% | |
| TTTGCAGTGGAAAGGTTAGT+TGG | + | chr8_2:56352630-56352649 | None:intergenic | 40.0% | |
| ! | CGTTGAATTTTGCAGTGGAA+AGG | + | chr8_2:56352638-56352657 | None:intergenic | 40.0% |
| ! | AACGCGAAGGATAAGTTTTG+AGG | + | chr8_2:56352780-56352799 | None:intergenic | 40.0% |
| GAATCGGGGATTAAAAGAAC+AGG | + | chr8_2:56352831-56352850 | None:intergenic | 40.0% | |
| TTGAATCGCCCAATTGAATC+GGG | + | chr8_2:56352846-56352865 | None:intergenic | 40.0% | |
| ! | GACATTTTTAATCAACGGCC+TGG | - | chr8_2:56353234-56353253 | Msa1256420:intron | 40.0% |
| AGGAAAAAAGTTGCAAGACC+AGG | + | chr8_2:56353255-56353274 | None:intergenic | 40.0% | |
| CTTCAATAGGCCAGAATCAT+CGG | + | chr8_2:56353373-56353392 | None:intergenic | 40.0% | |
| ! | AATTCTCGGAGGTTTAGTTC+TGG | - | chr8_2:56353530-56353549 | Msa1256420:intron | 40.0% |
| !! | AGTTCTGGTTTCTGTTATGG+TGG | - | chr8_2:56353545-56353564 | Msa1256420:intron | 40.0% |
| TTCAGGCCAAGGTTTATGTT+AGG | + | chr8_2:56353708-56353727 | None:intergenic | 40.0% | |
| GATCATGCAAGGAGATATTC+AGG | + | chr8_2:56353725-56353744 | None:intergenic | 40.0% | |
| !! | CAGAGGATTTTGATGCGAAT+AGG | - | chr8_2:56353757-56353776 | Msa1256420:intron | 40.0% |
| CTTGGACAAAACCATTACCT+CGG | + | chr8_2:56353898-56353917 | None:intergenic | 40.0% | |
| !! | CTTGTTTGACTTGGAAGCAA+AGG | - | chr8_2:56354039-56354058 | Msa1256420:intron | 40.0% |
| !! | ATTTGTATTGGTGCTGCTAG+AGG | - | chr8_2:56354068-56354087 | Msa1256420:intron | 40.0% |
| GGTCTTCATTACCTTCACAA+AGG | - | chr8_2:56354089-56354108 | Msa1256420:intron | 40.0% | |
| !! | ATCACAGTGGATTATTCCAC+CGG | + | chr8_2:56354120-56354139 | None:intergenic | 40.0% |
| !! | TAGTGGATTTCACATCACAG+TGG | + | chr8_2:56354133-56354152 | None:intergenic | 40.0% |
| !! | GATTTTGGTCTTTCAAGGAC+AGG | - | chr8_2:56354191-56354210 | Msa1256420:CDS | 40.0% |
| TATGTCAGCACACGTGTTAA+AGG | - | chr8_2:56354233-56354252 | Msa1256420:CDS | 40.0% | |
| !! | GCCAAATTGACTTGTTCACT+TGG | + | chr8_2:56354386-56354405 | None:intergenic | 40.0% |
| CAAGTCAATTTGGCTGAATG+GGG | - | chr8_2:56354392-56354411 | Msa1256420:CDS | 40.0% | |
| GGATTGCTTTGCAAAGACAA+AGG | - | chr8_2:56354413-56354432 | Msa1256420:CDS | 40.0% | |
| GACTGTGGAAAAATGCTTAC+AGG | - | chr8_2:56354508-56354527 | Msa1256420:CDS | 40.0% | |
| ! | TACAGGAGTATGGTTGTGAT+AGG | - | chr8_2:56354525-56354544 | Msa1256420:CDS | 40.0% |
| ! | AACAACGGTTGATGTGTTGT+GGG | - | chr8_2:56354550-56354569 | Msa1256420:CDS | 40.0% |
| TGTTTGGGAAGGTAGTAAAC+TGG | + | chr8_2:56352566-56352585 | None:intergenic | 40.0% | |
| !! | GTACCATGTAGGTGTTGTTT+GGG | + | chr8_2:56352581-56352600 | None:intergenic | 40.0% |
| GAAATGGAAACGTACCATGT+AGG | + | chr8_2:56352592-56352611 | None:intergenic | 40.0% | |
| TTTGCAGTGGAAAGGTTAGT+TGG | + | chr8_2:56352630-56352649 | None:intergenic | 40.0% | |
| ! | CGTTGAATTTTGCAGTGGAA+AGG | + | chr8_2:56352638-56352657 | None:intergenic | 40.0% |
| ! | AACGCGAAGGATAAGTTTTG+AGG | + | chr8_2:56352780-56352799 | None:intergenic | 40.0% |
| GAATCGGGGATTAAAAGAAC+AGG | + | chr8_2:56352831-56352850 | None:intergenic | 40.0% | |
| TTGAATCGCCCAATTGAATC+GGG | + | chr8_2:56352846-56352865 | None:intergenic | 40.0% | |
| ! | GACATTTTTAATCAACGGCC+TGG | - | chr8_2:56353234-56353253 | Msa1256420:intron | 40.0% |
| AGGAAAAAAGTTGCAAGACC+AGG | + | chr8_2:56353255-56353274 | None:intergenic | 40.0% | |
| CTTCAATAGGCCAGAATCAT+CGG | + | chr8_2:56353373-56353392 | None:intergenic | 40.0% | |
| ! | AATTCTCGGAGGTTTAGTTC+TGG | - | chr8_2:56353530-56353549 | Msa1256420:intron | 40.0% |
| !! | AGTTCTGGTTTCTGTTATGG+TGG | - | chr8_2:56353545-56353564 | Msa1256420:intron | 40.0% |
| TTCAGGCCAAGGTTTATGTT+AGG | + | chr8_2:56353708-56353727 | None:intergenic | 40.0% | |
| GATCATGCAAGGAGATATTC+AGG | + | chr8_2:56353725-56353744 | None:intergenic | 40.0% | |
| !! | CAGAGGATTTTGATGCGAAT+AGG | - | chr8_2:56353757-56353776 | Msa1256420:intron | 40.0% |
| CTTGGACAAAACCATTACCT+CGG | + | chr8_2:56353898-56353917 | None:intergenic | 40.0% | |
| !! | CTTGTTTGACTTGGAAGCAA+AGG | - | chr8_2:56354039-56354058 | Msa1256420:intron | 40.0% |
| !! | ATTTGTATTGGTGCTGCTAG+AGG | - | chr8_2:56354068-56354087 | Msa1256420:intron | 40.0% |
| GGTCTTCATTACCTTCACAA+AGG | - | chr8_2:56354089-56354108 | Msa1256420:intron | 40.0% | |
| !! | ATCACAGTGGATTATTCCAC+CGG | + | chr8_2:56354120-56354139 | None:intergenic | 40.0% |
| !! | TAGTGGATTTCACATCACAG+TGG | + | chr8_2:56354133-56354152 | None:intergenic | 40.0% |
| !! | GATTTTGGTCTTTCAAGGAC+AGG | - | chr8_2:56354191-56354210 | Msa1256420:CDS | 40.0% |
| TATGTCAGCACACGTGTTAA+AGG | - | chr8_2:56354233-56354252 | Msa1256420:CDS | 40.0% | |
| !! | GCCAAATTGACTTGTTCACT+TGG | + | chr8_2:56354386-56354405 | None:intergenic | 40.0% |
| CAAGTCAATTTGGCTGAATG+GGG | - | chr8_2:56354392-56354411 | Msa1256420:CDS | 40.0% | |
| GGATTGCTTTGCAAAGACAA+AGG | - | chr8_2:56354413-56354432 | Msa1256420:CDS | 40.0% | |
| GACTGTGGAAAAATGCTTAC+AGG | - | chr8_2:56354508-56354527 | Msa1256420:CDS | 40.0% | |
| ! | TACAGGAGTATGGTTGTGAT+AGG | - | chr8_2:56354525-56354544 | Msa1256420:CDS | 40.0% |
| ! | AACAACGGTTGATGTGTTGT+GGG | - | chr8_2:56354550-56354569 | Msa1256420:CDS | 40.0% |
| GCAGTTTGGTAGAGAGATGA+AGG | + | chr8_2:56352516-56352535 | None:intergenic | 45.0% | |
| ACTGGTACGAAGATTCGGAA+TGG | + | chr8_2:56352548-56352567 | None:intergenic | 45.0% | |
| !! | CATGTAGGTGTTGTTTGGGA+AGG | + | chr8_2:56352577-56352596 | None:intergenic | 45.0% |
| CTTCCCAAACAACACCTACA+TGG | - | chr8_2:56352575-56352594 | Msa1256420:CDS | 45.0% | |
| !! | CGTACCATGTAGGTGTTGTT+TGG | + | chr8_2:56352582-56352601 | None:intergenic | 45.0% |
| TGAATCGCCCAATTGAATCG+GGG | + | chr8_2:56352845-56352864 | None:intergenic | 45.0% | |
| ACAAAACACCGCCTTAACGT+CGG | - | chr8_2:56352933-56352952 | Msa1256420:intron | 45.0% | |
| ! | CATAAGTTGGAGTGTTCCTG+TGG | - | chr8_2:56353181-56353200 | Msa1256420:intron | 45.0% |
| !! | GAAGATTAGTCTTCCTGTGG+TGG | - | chr8_2:56353500-56353519 | Msa1256420:intron | 45.0% |
| AGAATTGAAACCACCACCAC+AGG | + | chr8_2:56353516-56353535 | None:intergenic | 45.0% | |
| !! | GTGGTGGTGGTTTCAATTCT+CGG | - | chr8_2:56353516-56353535 | Msa1256420:intron | 45.0% |
| ! | TGCGAGTTGAAGATCATGCA+AGG | + | chr8_2:56353736-56353755 | None:intergenic | 45.0% |
| TGATCTTCAACTCGCAACAG+AGG | - | chr8_2:56353740-56353759 | Msa1256420:intron | 45.0% | |
| ! | CAGTGAAAAGAAGTGTGCCT+GGG | - | chr8_2:56353844-56353863 | Msa1256420:CDS | 45.0% |
| GAGGTGTATGTGACAGATCT+TGG | + | chr8_2:56353916-56353935 | None:intergenic | 45.0% | |
| TACCTTCACAAAGGAGTAGC+CGG | - | chr8_2:56354098-56354117 | Msa1256420:intron | 45.0% | |
| ACTTGGACAAGACAGTTCGA+TGG | + | chr8_2:56354369-56354388 | None:intergenic | 45.0% | |
| TGGTTGTGATAGGCCAACAA+CGG | - | chr8_2:56354535-56354554 | Msa1256420:CDS | 45.0% | |
| CACAACACATCAACCGTTGT+TGG | + | chr8_2:56354551-56354570 | None:intergenic | 45.0% | |
| ! | CAACAACGGTTGATGTGTTG+TGG | - | chr8_2:56354549-56354568 | Msa1256420:CDS | 45.0% |
| GCAGGTAAACGCTGAACTTT+AGG | + | chr8_2:56354653-56354672 | None:intergenic | 45.0% | |
| ! | TCTGTCTACACTGACTGAAG+TGG | - | chr8_2:56354673-56354692 | Msa1256420:CDS | 45.0% |
| ! | TCTACACTGACTGAAGTGGA+TGG | - | chr8_2:56354677-56354696 | Msa1256420:CDS | 45.0% |
| AAGTGGATGGCACATCTACT+GGG | - | chr8_2:56354690-56354709 | Msa1256420:CDS | 45.0% | |
| CAACTTGCAAGTGTCTCAAG+TGG | - | chr8_2:56354790-56354809 | Msa1256420:CDS | 45.0% | |
| GCAGTTTGGTAGAGAGATGA+AGG | + | chr8_2:56352516-56352535 | None:intergenic | 45.0% | |
| ACTGGTACGAAGATTCGGAA+TGG | + | chr8_2:56352548-56352567 | None:intergenic | 45.0% | |
| !! | CATGTAGGTGTTGTTTGGGA+AGG | + | chr8_2:56352577-56352596 | None:intergenic | 45.0% |
| CTTCCCAAACAACACCTACA+TGG | - | chr8_2:56352575-56352594 | Msa1256420:CDS | 45.0% | |
| !! | CGTACCATGTAGGTGTTGTT+TGG | + | chr8_2:56352582-56352601 | None:intergenic | 45.0% |
| TGAATCGCCCAATTGAATCG+GGG | + | chr8_2:56352845-56352864 | None:intergenic | 45.0% | |
| ACAAAACACCGCCTTAACGT+CGG | - | chr8_2:56352933-56352952 | Msa1256420:intron | 45.0% | |
| ! | CATAAGTTGGAGTGTTCCTG+TGG | - | chr8_2:56353181-56353200 | Msa1256420:intron | 45.0% |
| !! | GAAGATTAGTCTTCCTGTGG+TGG | - | chr8_2:56353500-56353519 | Msa1256420:intron | 45.0% |
| AGAATTGAAACCACCACCAC+AGG | + | chr8_2:56353516-56353535 | None:intergenic | 45.0% | |
| !! | GTGGTGGTGGTTTCAATTCT+CGG | - | chr8_2:56353516-56353535 | Msa1256420:intron | 45.0% |
| ! | TGCGAGTTGAAGATCATGCA+AGG | + | chr8_2:56353736-56353755 | None:intergenic | 45.0% |
| TGATCTTCAACTCGCAACAG+AGG | - | chr8_2:56353740-56353759 | Msa1256420:intron | 45.0% | |
| ! | CAGTGAAAAGAAGTGTGCCT+GGG | - | chr8_2:56353844-56353863 | Msa1256420:CDS | 45.0% |
| GAGGTGTATGTGACAGATCT+TGG | + | chr8_2:56353916-56353935 | None:intergenic | 45.0% | |
| TACCTTCACAAAGGAGTAGC+CGG | - | chr8_2:56354098-56354117 | Msa1256420:intron | 45.0% | |
| ACTTGGACAAGACAGTTCGA+TGG | + | chr8_2:56354369-56354388 | None:intergenic | 45.0% | |
| TGGTTGTGATAGGCCAACAA+CGG | - | chr8_2:56354535-56354554 | Msa1256420:CDS | 45.0% | |
| CACAACACATCAACCGTTGT+TGG | + | chr8_2:56354551-56354570 | None:intergenic | 45.0% | |
| ! | CAACAACGGTTGATGTGTTG+TGG | - | chr8_2:56354549-56354568 | Msa1256420:CDS | 45.0% |
| GCAGGTAAACGCTGAACTTT+AGG | + | chr8_2:56354653-56354672 | None:intergenic | 45.0% | |
| ! | TCTGTCTACACTGACTGAAG+TGG | - | chr8_2:56354673-56354692 | Msa1256420:CDS | 45.0% |
| ! | TCTACACTGACTGAAGTGGA+TGG | - | chr8_2:56354677-56354696 | Msa1256420:CDS | 45.0% |
| AAGTGGATGGCACATCTACT+GGG | - | chr8_2:56354690-56354709 | Msa1256420:CDS | 45.0% | |
| CAACTTGCAAGTGTCTCAAG+TGG | - | chr8_2:56354790-56354809 | Msa1256420:CDS | 45.0% | |
| TTTCTCCTCCGACGTTAAGG+CGG | + | chr8_2:56352944-56352963 | None:intergenic | 50.0% | |
| CAGTTTCTCCTCCGACGTTA+AGG | + | chr8_2:56352947-56352966 | None:intergenic | 50.0% | |
| ACTGCAGATGATGAGTCCGA+TGG | - | chr8_2:56353077-56353096 | Msa1256420:intron | 50.0% | |
| GTGGTTCGTTCCGATGATTC+TGG | - | chr8_2:56353360-56353379 | Msa1256420:intron | 50.0% | |
| !! | GATTAGTCTTCCTGTGGTGG+TGG | - | chr8_2:56353503-56353522 | Msa1256420:intron | 50.0% |
| GTGGTGGTTTCAATTCTCGG+AGG | - | chr8_2:56353519-56353538 | Msa1256420:intron | 50.0% | |
| GCAAGGAGATATTCAGGCCA+AGG | + | chr8_2:56353719-56353738 | None:intergenic | 50.0% | |
| ! | GCAGTGAAAAGAAGTGTGCC+TGG | - | chr8_2:56353843-56353862 | Msa1256420:CDS | 50.0% |
| ! | AAAAGAAGTGTGCCTGGGTC+AGG | - | chr8_2:56353849-56353868 | Msa1256420:CDS | 50.0% |
| TGATATCCTTGACCTGACCC+AGG | + | chr8_2:56353864-56353883 | None:intergenic | 50.0% | |
| ! | GGTTGATGTGTTGTGGGACT+TGG | - | chr8_2:56354556-56354575 | Msa1256420:CDS | 50.0% |
| GCTTCAGAGAGAACCACATG+AGG | - | chr8_2:56354592-56354611 | Msa1256420:CDS | 50.0% | |
| CTGCTAGAACTGTCCTCATG+TGG | + | chr8_2:56354608-56354627 | None:intergenic | 50.0% | |
| TCAGTCAGTGTAGACAGAGC+AGG | + | chr8_2:56354671-56354690 | None:intergenic | 50.0% | |
| GAAGTGGATGGCACATCTAC+TGG | - | chr8_2:56354689-56354708 | Msa1256420:CDS | 50.0% | |
| CTTGCAAGTGTCTCAAGTGG+AGG | - | chr8_2:56354793-56354812 | Msa1256420:CDS | 50.0% | |
| TTTCTCCTCCGACGTTAAGG+CGG | + | chr8_2:56352944-56352963 | None:intergenic | 50.0% | |
| CAGTTTCTCCTCCGACGTTA+AGG | + | chr8_2:56352947-56352966 | None:intergenic | 50.0% | |
| ACTGCAGATGATGAGTCCGA+TGG | - | chr8_2:56353077-56353096 | Msa1256420:intron | 50.0% | |
| GTGGTTCGTTCCGATGATTC+TGG | - | chr8_2:56353360-56353379 | Msa1256420:intron | 50.0% | |
| !! | GATTAGTCTTCCTGTGGTGG+TGG | - | chr8_2:56353503-56353522 | Msa1256420:intron | 50.0% |
| GTGGTGGTTTCAATTCTCGG+AGG | - | chr8_2:56353519-56353538 | Msa1256420:intron | 50.0% | |
| GCAAGGAGATATTCAGGCCA+AGG | + | chr8_2:56353719-56353738 | None:intergenic | 50.0% | |
| ! | GCAGTGAAAAGAAGTGTGCC+TGG | - | chr8_2:56353843-56353862 | Msa1256420:CDS | 50.0% |
| ! | AAAAGAAGTGTGCCTGGGTC+AGG | - | chr8_2:56353849-56353868 | Msa1256420:CDS | 50.0% |
| TGATATCCTTGACCTGACCC+AGG | + | chr8_2:56353864-56353883 | None:intergenic | 50.0% | |
| ! | GGTTGATGTGTTGTGGGACT+TGG | - | chr8_2:56354556-56354575 | Msa1256420:CDS | 50.0% |
| GCTTCAGAGAGAACCACATG+AGG | - | chr8_2:56354592-56354611 | Msa1256420:CDS | 50.0% | |
| CTGCTAGAACTGTCCTCATG+TGG | + | chr8_2:56354608-56354627 | None:intergenic | 50.0% | |
| TCAGTCAGTGTAGACAGAGC+AGG | + | chr8_2:56354671-56354690 | None:intergenic | 50.0% | |
| GAAGTGGATGGCACATCTAC+TGG | - | chr8_2:56354689-56354708 | Msa1256420:CDS | 50.0% | |
| CTTGCAAGTGTCTCAAGTGG+AGG | - | chr8_2:56354793-56354812 | Msa1256420:CDS | 50.0% | |
| CGGTTTACACTCTCGAGCGT+TGG | - | chr8_2:56352908-56352927 | Msa1256420:intron | 55.0% | |
| AAACACCGCCTTAACGTCGG+AGG | - | chr8_2:56352936-56352955 | Msa1256420:intron | 55.0% | |
| !! | GGTGGGCTATACATGTTGCG+TGG | - | chr8_2:56353318-56353337 | Msa1256420:intron | 55.0% |
| TTGGAGATTCCAGCTGCTGC+AGG | - | chr8_2:56353627-56353646 | Msa1256420:intron | 55.0% | |
| GAAATTCCTCCTGCAGCAGC+TGG | + | chr8_2:56353639-56353658 | None:intergenic | 55.0% | |
| ! | CACCGGCTACTCCTTTGTGA+AGG | + | chr8_2:56354103-56354122 | None:intergenic | 55.0% |
| CTTCACAAAGGAGTAGCCGG+TGG | - | chr8_2:56354101-56354120 | Msa1256420:intron | 55.0% | |
| GGACAAGACAGTTCGATGGC+TGG | + | chr8_2:56354365-56354384 | None:intergenic | 55.0% | |
| TGGATGGCACATCTACTGGG+AGG | - | chr8_2:56354693-56354712 | Msa1256420:CDS | 55.0% | |
| GGATGGCACATCTACTGGGA+GGG | - | chr8_2:56354694-56354713 | Msa1256420:CDS | 55.0% | |
| CGGTTTACACTCTCGAGCGT+TGG | - | chr8_2:56352908-56352927 | Msa1256420:intron | 55.0% | |
| AAACACCGCCTTAACGTCGG+AGG | - | chr8_2:56352936-56352955 | Msa1256420:intron | 55.0% | |
| !! | GGTGGGCTATACATGTTGCG+TGG | - | chr8_2:56353318-56353337 | Msa1256420:intron | 55.0% |
| TTGGAGATTCCAGCTGCTGC+AGG | - | chr8_2:56353627-56353646 | Msa1256420:intron | 55.0% | |
| GAAATTCCTCCTGCAGCAGC+TGG | + | chr8_2:56353639-56353658 | None:intergenic | 55.0% | |
| ! | CACCGGCTACTCCTTTGTGA+AGG | + | chr8_2:56354103-56354122 | None:intergenic | 55.0% |
| CTTCACAAAGGAGTAGCCGG+TGG | - | chr8_2:56354101-56354120 | Msa1256420:intron | 55.0% | |
| GGACAAGACAGTTCGATGGC+TGG | + | chr8_2:56354365-56354384 | None:intergenic | 55.0% | |
| TGGATGGCACATCTACTGGG+AGG | - | chr8_2:56354693-56354712 | Msa1256420:CDS | 55.0% | |
| GGATGGCACATCTACTGGGA+GGG | - | chr8_2:56354694-56354713 | Msa1256420:CDS | 55.0% | |
| GAGATTCCAGCTGCTGCAGG+AGG | - | chr8_2:56353630-56353649 | Msa1256420:intron | 60.0% | |
| AGTGTGCCTGGGTCAGGTCA+AGG | - | chr8_2:56353855-56353874 | Msa1256420:CDS | 60.0% | |
| GAGATTCCAGCTGCTGCAGG+AGG | - | chr8_2:56353630-56353649 | Msa1256420:intron | 60.0% | |
| AGTGTGCCTGGGTCAGGTCA+AGG | - | chr8_2:56353855-56353874 | Msa1256420:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 56352510 | 56354832 | 56352510 | ID=Msa1256420;Name=Msa1256420 |
| chr8_2 | mRNA | 56352510 | 56354832 | 56352510 | ID=Msa1256420-mRNA-1;Parent=Msa1256420;Name=Msa1256420-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|3|0|414 |
| chr8_2 | exon | 56354149 | 56354832 | 56354149 | ID=Msa1256420-mRNA-1:exon:17394;Parent=Msa1256420-mRNA-1 |
| chr8_2 | exon | 56353791 | 56354048 | 56353791 | ID=Msa1256420-mRNA-1:exon:17393;Parent=Msa1256420-mRNA-1 |
| chr8_2 | exon | 56352510 | 56352812 | 56352510 | ID=Msa1256420-mRNA-1:exon:17392;Parent=Msa1256420-mRNA-1 |
| chr8_2 | CDS | 56354149 | 56354832 | 56354149 | ID=Msa1256420-mRNA-1:cds;Parent=Msa1256420-mRNA-1 |
| chr8_2 | CDS | 56353791 | 56354048 | 56353791 | ID=Msa1256420-mRNA-1:cds;Parent=Msa1256420-mRNA-1 |
| chr8_2 | CDS | 56352510 | 56352812 | 56352510 | ID=Msa1256420-mRNA-1:cds;Parent=Msa1256420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
