Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1130240 | Msa1260010 | 0.857544 | 1.518643e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 81 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACATATCCTAATTAATATT+TGG | 0.192946 | 8_2:-61876772 | Msa1260010:three_prime_UTR |
| CCTGCTACTGTTATGGAATT+AGG | 0.208187 | 8_2:-61876931 | Msa1260010:three_prime_UTR |
| GGTTTCTTGCTTTGCTGTGC+TGG | 0.223155 | 8_2:-61877239 | Msa1260010:CDS |
| CGGCTATTGGTGCTTCATTT+GGG | 0.240735 | 8_2:-61877261 | Msa1260010:CDS |
| TCGGCTATTGGTGCTTCATT+TGG | 0.261418 | 8_2:-61877262 | Msa1260010:CDS |
| TTGCACAGTTTCAGTGTATC+AGG | 0.292500 | 8_2:-61876478 | Msa1260010:three_prime_UTR |
| TTTGGATGTGGCTCGGCTAT+TGG | 0.297657 | 8_2:-61877274 | Msa1260010:CDS |
| ACCACCTTGCCCAAGATAAA+AGG | 0.303171 | 8_2:+61876309 | None:intergenic |
| CTTAGTTCCTGCTACTGTTA+TGG | 0.309027 | 8_2:-61876938 | Msa1260010:three_prime_UTR |
| GGCGTGATTAGCTGCTGGTC+TGG | 0.313675 | 8_2:-61876507 | Msa1260010:three_prime_UTR |
| GTTTCTTGCTTTGCTGTGCT+GGG | 0.321557 | 8_2:-61877238 | Msa1260010:CDS |
| GCGTGATTAGCTGCTGGTCT+GGG | 0.328518 | 8_2:-61876506 | Msa1260010:three_prime_UTR |
| AATGCTGCAAGAGGATAAAT+TGG | 0.336065 | 8_2:-61876230 | Msa1260010:three_prime_UTR |
| ACCACCTCCAAATATTAATT+AGG | 0.340830 | 8_2:+61876765 | None:intergenic |
| ATATGTGGAGCAACCTCATT+TGG | 0.344422 | 8_2:-61877292 | Msa1260010:CDS |
| CAAGAGCTTGCCAACAATAA+AGG | 0.354039 | 8_2:-61876659 | Msa1260010:three_prime_UTR |
| GCTGTTGCGGTTTGGTGTTT+TGG | 0.355487 | 8_2:-61877012 | Msa1260010:CDS |
| CTGTTAGTATGGCAGTTATA+TGG | 0.362068 | 8_2:-61876408 | Msa1260010:three_prime_UTR |
| TGTTATGGAATTAGGACTAT+AGG | 0.373594 | 8_2:-61876923 | Msa1260010:three_prime_UTR |
| ATCACACAGGTTTCCAATCA+TGG | 0.375516 | 8_2:-61881863 | Msa1260010:intron |
| CCTCAAATTTGTGTCTTTCG+AGG | 0.393208 | 8_2:-61876626 | Msa1260010:three_prime_UTR |
| TCAGAAAGGTTCTGTTAGTA+TGG | 0.404307 | 8_2:-61876419 | Msa1260010:three_prime_UTR |
| AGATCATATGTTGAAGATGA+TGG | 0.418882 | 8_2:-61878653 | Msa1260010:CDS |
| ACTGTGTGCAGGTGGCTGTT+AGG | 0.425119 | 8_2:-61876528 | Msa1260010:three_prime_UTR |
| AATATTTGGAGGTGGTCCTT+TGG | 0.427300 | 8_2:-61876758 | Msa1260010:three_prime_UTR |
| CGGTCTCTGTATCTGTTTGT+GGG | 0.434430 | 8_2:-61877102 | Msa1260010:CDS |
| GTCCTTAGTCCTTCAATATG+TGG | 0.441394 | 8_2:-61877307 | Msa1260010:CDS |
| CCTCGAAAGACACAAATTTG+AGG | 0.447551 | 8_2:+61876626 | None:intergenic |
| TTAGGGATGGTTGTGTGGCT+AGG | 0.451183 | 8_2:-61878680 | Msa1260010:intron |
| TGCCGGTGGCTGTTGCGGTT+TGG | 0.456256 | 8_2:-61877020 | Msa1260010:CDS |
| ATTGCTGCTGTGTTGACATC+AGG | 0.460585 | 8_2:-61877078 | Msa1260010:CDS |
| ATCTGAAAGAAGTGTCTCAA+TGG | 0.469092 | 8_2:-61876836 | Msa1260010:three_prime_UTR |
| CACCAAACCGCAACAGCCAC+CGG | 0.470881 | 8_2:+61877018 | None:intergenic |
| TTTGAGGAAGTAGTTGGTGG+TGG | 0.472026 | 8_2:-61876593 | Msa1260010:three_prime_UTR |
| CAAAGTATAACATAAGGTAT+AGG | 0.473183 | 8_2:+61876275 | None:intergenic |
| GTTCCACCAACTCTTGTAGA+AGG | 0.481619 | 8_2:-61881787 | Msa1260010:CDS |
| GCGGTCTCTGTATCTGTTTG+TGG | 0.482483 | 8_2:-61877103 | Msa1260010:CDS |
| CAAGAGTTGGTGGAACCACT+TGG | 0.483728 | 8_2:+61881794 | None:intergenic |
| TAGGAGGCATGTCAGGTTGA+TGG | 0.493449 | 8_2:-61876989 | Msa1260010:three_prime_UTR |
| CCTAATTCCATAACAGTAGC+AGG | 0.494468 | 8_2:+61876931 | None:intergenic |
| CCATGTTCCTAAAATTTGAC+CGG | 0.504941 | 8_2:-61882009 | Msa1260010:CDS |
| TCTTTCAGATGGGATCAAAT+CGG | 0.505420 | 8_2:+61876849 | None:intergenic |
| ATTGAGACACTTCTTTCAGA+TGG | 0.506206 | 8_2:+61876838 | None:intergenic |
| TCTGAAAGAAGTGTCTCAAT+GGG | 0.506630 | 8_2:-61876835 | Msa1260010:three_prime_UTR |
| TATGAACAAAGTATAACATA+AGG | 0.511058 | 8_2:+61876269 | None:intergenic |
| ATTCAGTTCGAAACTCATCC+AGG | 0.514895 | 8_2:-61881967 | Msa1260010:intron |
| GAGGTTGCTCCACATATTGA+AGG | 0.515151 | 8_2:+61877298 | None:intergenic |
| TTTCTTGCTTTGCTGTGCTG+GGG | 0.517631 | 8_2:-61877237 | Msa1260010:CDS |
| CTCCACATATTGAAGGACTA+AGG | 0.519079 | 8_2:+61877305 | None:intergenic |
| TTGAGACACTTCTTTCAGAT+GGG | 0.523638 | 8_2:+61876839 | None:intergenic |
| ATATCCTAATTAATATTTGG+AGG | 0.528579 | 8_2:-61876769 | Msa1260010:three_prime_UTR |
| GGCTATTGGTGCTTCATTTG+GGG | 0.535223 | 8_2:-61877260 | Msa1260010:CDS |
| GGATGATCCTCACTGTGTGC+AGG | 0.542250 | 8_2:-61876539 | Msa1260010:three_prime_UTR |
| AACCTCATTTGGATGTGGCT+CGG | 0.543359 | 8_2:-61877281 | Msa1260010:CDS |
| TGTTAGGCGTGATTAGCTGC+TGG | 0.545330 | 8_2:-61876512 | Msa1260010:three_prime_UTR |
| AGGCTTTAGTATGCGCAGCT+AGG | 0.546409 | 8_2:-61876443 | Msa1260010:three_prime_UTR |
| GATGCTAAAATATGCATCCA+AGG | 0.551444 | 8_2:+61876359 | None:intergenic |
| TCCTAATTAATATTTGGAGG+TGG | 0.552625 | 8_2:-61876766 | Msa1260010:three_prime_UTR |
| CAAGAGGATAAATTGGTTGG+TGG | 0.554849 | 8_2:-61876223 | Msa1260010:three_prime_UTR |
| CTTCAAGATAATGCTGCAAG+AGG | 0.565630 | 8_2:-61876239 | Msa1260010:three_prime_UTR |
| TGATCCTCACTGTGTGCAGG+TGG | 0.569837 | 8_2:-61876536 | Msa1260010:three_prime_UTR |
| ATGGTGTTGTGTTAGTTGTG+TGG | 0.577069 | 8_2:-61876970 | Msa1260010:three_prime_UTR |
| CACAGTTTCAGTGTATCAGG+AGG | 0.581508 | 8_2:-61876475 | Msa1260010:three_prime_UTR |
| CGTGATTAGCTGCTGGTCTG+GGG | 0.585717 | 8_2:-61876505 | Msa1260010:three_prime_UTR |
| AGCCGAGCCACATCCAAATG+AGG | 0.589740 | 8_2:+61877279 | None:intergenic |
| GCGACTCCTTCTACAAGAGT+TGG | 0.593529 | 8_2:+61881781 | None:intergenic |
| TATATAATTAGCATCTCCAA+AGG | 0.599061 | 8_2:+61876742 | None:intergenic |
| ACTCCTTCTACAAGAGTTGG+TGG | 0.600375 | 8_2:+61881784 | None:intergenic |
| ATGCGCAGCTAGGCTCAGAA+AGG | 0.606118 | 8_2:-61876433 | Msa1260010:three_prime_UTR |
| AAGAGTTGGTGGAACCACTT+GGG | 0.606767 | 8_2:+61881795 | None:intergenic |
| CAGGTTTCCAATCATGGCGG+AGG | 0.609750 | 8_2:-61881857 | Msa1260010:CDS |
| AAAACTTATTTAGAAGACAA+TGG | 0.613147 | 8_2:-61876693 | Msa1260010:three_prime_UTR |
| TTTGTTGCCGGTGGCTGTTG+CGG | 0.617996 | 8_2:-61877025 | Msa1260010:CDS |
| CTGCAAGAGGATAAATTGGT+TGG | 0.621683 | 8_2:-61876226 | Msa1260010:three_prime_UTR |
| GGAGCAACCTCATTTGGATG+TGG | 0.632398 | 8_2:-61877286 | Msa1260010:CDS |
| GAGTTTCGAACTGAATCTAA+CGG | 0.649501 | 8_2:+61881974 | None:intergenic |
| ACAGTTTCAGTGTATCAGGA+GGG | 0.670193 | 8_2:-61876474 | Msa1260010:three_prime_UTR |
| GTTGACATCAGGTTGTGCAG+TGG | 0.680238 | 8_2:-61877067 | Msa1260010:CDS |
| ACAAGAAAATGGAACCCAAG+TGG | 0.699442 | 8_2:-61881809 | Msa1260010:CDS |
| ACAGCCACCTGCACACAGTG+AGG | 0.710030 | 8_2:+61876532 | None:intergenic |
| ACACAGGTTTCCAATCATGG+CGG | 0.760300 | 8_2:-61881860 | Msa1260010:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTTTCATTATTATATTT+GGG | + | chr8_2:61877495-61877514 | None:intergenic | 10.0% |
| !! | TAATCTTTCATTATTATATT+TGG | + | chr8_2:61877496-61877515 | None:intergenic | 10.0% |
| !! | TATAATAATGAAAGATTAAA+CGG | - | chr8_2:61877498-61877517 | Msa1260010:intron | 10.0% |
| !!! | TAATGATTGAAAATTTTATA+GGG | + | chr8_2:61878386-61878405 | None:intergenic | 10.0% |
| !!! | AATATTGTATCATTTTTTAT+GGG | + | chr8_2:61878899-61878918 | None:intergenic | 10.0% |
| !!! | TAATATTGTATCATTTTTTA+TGG | + | chr8_2:61878900-61878919 | None:intergenic | 10.0% |
| !! | TATCTTATTATATAATACAA+AGG | - | chr8_2:61879057-61879076 | Msa1260010:intron | 10.0% |
| !!! | TATTTAATCTTTAAGAAATA+TGG | + | chr8_2:61880280-61880299 | None:intergenic | 10.0% |
| !! | ATTTCTTAAAGATTAAATAA+TGG | - | chr8_2:61880281-61880300 | Msa1260010:intron | 10.0% |
| !! | TTTCTTAAAGATTAAATAAT+GGG | - | chr8_2:61880282-61880301 | Msa1260010:intron | 10.0% |
| !!! | TTTTGAATAAACTATTGTTT+TGG | - | chr8_2:61876781-61876800 | Msa1260010:three_prime_UTR | 15.0% |
| !!! | AATTTACATATCTTATTTTG+AGG | + | chr8_2:61877164-61877183 | None:intergenic | 15.0% |
| !! | TAATTTATACGTATAAACTT+AGG | + | chr8_2:61877385-61877404 | None:intergenic | 15.0% |
| !! | AACAAAAAAAGTAAAATCAA+GGG | - | chr8_2:61877521-61877540 | Msa1260010:intron | 15.0% |
| !! | GTAAAATTAATAGTCAAATA+TGG | + | chr8_2:61877899-61877918 | None:intergenic | 15.0% |
| !!! | GTAATGATTGAAAATTTTAT+AGG | + | chr8_2:61878387-61878406 | None:intergenic | 15.0% |
| !! | AATTGAATCTTATATTGAAT+TGG | - | chr8_2:61878496-61878515 | Msa1260010:intron | 15.0% |
| !! | AATCGATAAAAAATAGATAA+AGG | + | chr8_2:61878668-61878687 | None:intergenic | 15.0% |
| !!! | ATTTTTTTCTAACGAAAATT+TGG | - | chr8_2:61878974-61878993 | Msa1260010:intron | 15.0% |
| !!! | TGTTGTTTTTTCTTATTTTA+GGG | - | chr8_2:61879488-61879507 | Msa1260010:intron | 15.0% |
| !!! | TTATTTTCTTTTTACTTTTC+TGG | - | chr8_2:61879627-61879646 | Msa1260010:intron | 15.0% |
| !!! | TATTTTCTTTTTACTTTTCT+GGG | - | chr8_2:61879628-61879647 | Msa1260010:intron | 15.0% |
| !!! | GTTTTTTTTTAGAGTTATTT+TGG | - | chr8_2:61881284-61881303 | Msa1260010:intron | 15.0% |
| !! | TACATATCCTAATTAATATT+TGG | - | chr8_2:61881413-61881432 | Msa1260010:intron | 15.0% |
| !!! | AAACTATGTTTTTTTGTTTT+AGG | - | chr8_2:61881468-61881487 | Msa1260010:intron | 15.0% |
| !! | ATCTTTATAGCTTAGAAATA+AGG | - | chr8_2:61876500-61876519 | Msa1260010:three_prime_UTR | 20.0% |
| !! | AAATAAGGAAACTACAATTA+AGG | - | chr8_2:61876515-61876534 | Msa1260010:three_prime_UTR | 20.0% |
| !! | TCTTCATATATATTGTATTG+AGG | - | chr8_2:61876628-61876647 | Msa1260010:three_prime_UTR | 20.0% |
| !! | ACTTCAATTTAATACATCAA+GGG | + | chr8_2:61876730-61876749 | None:intergenic | 20.0% |
| !! | AACTTCAATTTAATACATCA+AGG | + | chr8_2:61876731-61876750 | None:intergenic | 20.0% |
| !! | TTTCTATTTATGGTTGATTA+GGG | + | chr8_2:61876884-61876903 | None:intergenic | 20.0% |
| !!! | TTTTCTATTTATGGTTGATT+AGG | + | chr8_2:61876885-61876904 | None:intergenic | 20.0% |
| !! | AAATAAAAATCATCTGCATT+GGG | + | chr8_2:61876996-61877015 | None:intergenic | 20.0% |
| !! | TAAGATATGTAAATTGAAAG+AGG | - | chr8_2:61877169-61877188 | Msa1260010:CDS | 20.0% |
| !! | AAAACTGCAAAATGAAAATT+AGG | + | chr8_2:61877331-61877350 | None:intergenic | 20.0% |
| !!! | TTCATTTTGCAGTTTTTTTT+TGG | - | chr8_2:61877335-61877354 | Msa1260010:intron | 20.0% |
| !!! | TATTTGGGTTTTGTTTTTAT+CGG | + | chr8_2:61877480-61877499 | None:intergenic | 20.0% |
| !! | GAACAAAAAAAGTAAAATCA+AGG | - | chr8_2:61877520-61877539 | Msa1260010:intron | 20.0% |
| !! | CTATTCATAATTTCATATGA+TGG | + | chr8_2:61877734-61877753 | None:intergenic | 20.0% |
| !! | TCATATGAAATTATGAATAG+AGG | - | chr8_2:61877734-61877753 | Msa1260010:intron | 20.0% |
| !!! | AATAAGTTTTTCAAATCTGA+TGG | - | chr8_2:61878018-61878037 | Msa1260010:intron | 20.0% |
| !!! | TTAAATTAAGTTGATTAACG+TGG | + | chr8_2:61878116-61878135 | None:intergenic | 20.0% |
| !!! | TAAAGGGTTAAATATGTTTT+TGG | - | chr8_2:61878299-61878318 | Msa1260010:intron | 20.0% |
| !!! | ATAAGATTCAATTATTGACT+CGG | + | chr8_2:61878489-61878508 | None:intergenic | 20.0% |
| !! | GCTCCATATATAATTAAATT+CGG | - | chr8_2:61879293-61879312 | Msa1260010:intron | 20.0% |
| !! | TGACCGAATTTAATTATATA+TGG | + | chr8_2:61879299-61879318 | None:intergenic | 20.0% |
| !! | AAAAAAGATGAAAGAAAATG+TGG | + | chr8_2:61879449-61879468 | None:intergenic | 20.0% |
| !!! | GTGTTGTTTTTTCTTATTTT+AGG | - | chr8_2:61879487-61879506 | Msa1260010:intron | 20.0% |
| !!! | CACATAAAAGTATATGAAAA+AGG | + | chr8_2:61879823-61879842 | None:intergenic | 20.0% |
| !! | TTTATGTGTTTATATGTACT+TGG | - | chr8_2:61879835-61879854 | Msa1260010:intron | 20.0% |
| !! | TTATGTGTTTATATGTACTT+GGG | - | chr8_2:61879836-61879855 | Msa1260010:intron | 20.0% |
| !! | TAAATAAACATTCATGTAAC+TGG | + | chr8_2:61880182-61880201 | None:intergenic | 20.0% |
| !! | CCAAAGAATTTATATAACAT+TGG | + | chr8_2:61880208-61880227 | None:intergenic | 20.0% |
| !! | CCAATGTTATATAAATTCTT+TGG | - | chr8_2:61880205-61880224 | Msa1260010:intron | 20.0% |
| !!! | AATAATGGGTTTAACAATTT+TGG | - | chr8_2:61880296-61880315 | Msa1260010:intron | 20.0% |
| !! | ATCATTGATAAAGTTAATCA+CGG | + | chr8_2:61880834-61880853 | None:intergenic | 20.0% |
| !! | ATATCCTAATTAATATTTGG+AGG | - | chr8_2:61881416-61881435 | Msa1260010:intron | 20.0% |
| !! | AAAACTTATTTAGAAGACAA+TGG | - | chr8_2:61881492-61881511 | Msa1260010:intron | 20.0% |
| !!! | ACTTAATTTTCCTTTATTGT+TGG | + | chr8_2:61881539-61881558 | None:intergenic | 20.0% |
| !! | TATGAACAAAGTATAACATA+AGG | + | chr8_2:61881919-61881938 | None:intergenic | 20.0% |
| ! | TTCGATTTAATTAATCACAC+AGG | - | chr8_2:61876309-61876328 | Msa1260010:three_prime_UTR | 25.0% |
| !! | GAAATTTTGTCACAAGAAAA+TGG | - | chr8_2:61876365-61876384 | Msa1260010:three_prime_UTR | 25.0% |
| !! | CAGTTTACAAACTATTGTTT+TGG | - | chr8_2:61876758-61876777 | Msa1260010:three_prime_UTR | 25.0% |
| !! | TGAGATGCATTTTCTATTTA+TGG | + | chr8_2:61876894-61876913 | None:intergenic | 25.0% |
| !!! | GTTTTCTTTTTTTAGGTTGA+GGG | + | chr8_2:61876974-61876993 | None:intergenic | 25.0% |
| ! | GAAATAAAAATCATCTGCAT+TGG | + | chr8_2:61876997-61877016 | None:intergenic | 25.0% |
| !!! | AGTTTCAACATTTTAGTTTG+AGG | + | chr8_2:61877199-61877218 | None:intergenic | 25.0% |
| !!! | ATAGTTTTATGAAGGAATGT+TGG | + | chr8_2:61877437-61877456 | None:intergenic | 25.0% |
| !!! | TATGTTGGATAGTTTTATGA+AGG | + | chr8_2:61877445-61877464 | None:intergenic | 25.0% |
| !! | TCATAATTTCATATGATGGA+TGG | + | chr8_2:61877730-61877749 | None:intergenic | 25.0% |
| !!! | GTTCTTTTTTTTAGTACAGT+GGG | + | chr8_2:61877815-61877834 | None:intergenic | 25.0% |
| !!! | TGTTCTTTTTTTTAGTACAG+TGG | + | chr8_2:61877816-61877835 | None:intergenic | 25.0% |
| ! | ATACTTTATATGCATCCTAA+TGG | - | chr8_2:61877973-61877992 | Msa1260010:intron | 25.0% |
| ! | GTGATGTTAGATATCATATT+GGG | - | chr8_2:61878040-61878059 | Msa1260010:intron | 25.0% |
| ! | AACTTAATTTAACTGCAAGA+TGG | - | chr8_2:61878124-61878143 | Msa1260010:intron | 25.0% |
| ! | AAGTTAAAGGAAAACTTTAG+AGG | + | chr8_2:61878358-61878377 | None:intergenic | 25.0% |
| ! | TTATAGGGACTAAAAGTTAA+AGG | + | chr8_2:61878371-61878390 | None:intergenic | 25.0% |
| !!! | TTTGTGATTTCGTTGTTTTT+AGG | + | chr8_2:61878563-61878582 | None:intergenic | 25.0% |
| ! | TGTTACCTGAAATTAAGTTA+AGG | + | chr8_2:61878638-61878657 | None:intergenic | 25.0% |
| !!! | AAATTTCCATCTTCACTTTT+GGG | + | chr8_2:61878934-61878953 | None:intergenic | 25.0% |
| !! | AAAATTTCCATCTTCACTTT+TGG | + | chr8_2:61878935-61878954 | None:intergenic | 25.0% |
| !!! | GTTTTTTCTTATTTTAGGGA+TGG | - | chr8_2:61879492-61879511 | Msa1260010:intron | 25.0% |
| ! | TATATGTACTTGGGATTTAT+TGG | - | chr8_2:61879845-61879864 | Msa1260010:intron | 25.0% |
| !!! | TATTGGTGTTTCTGTTTTTT+TGG | - | chr8_2:61879862-61879881 | Msa1260010:intron | 25.0% |
| !! | TAAAACATTGTCATGCATTT+TGG | - | chr8_2:61880088-61880107 | Msa1260010:intron | 25.0% |
| !! | TTTATATCATCACTAGCTTA+TGG | - | chr8_2:61880352-61880371 | Msa1260010:intron | 25.0% |
| ! | ATGGAAACAATCAAAATACT+TGG | - | chr8_2:61880371-61880390 | Msa1260010:intron | 25.0% |
| !!! | CTTTTCTCAATTTTGTTTGA+TGG | - | chr8_2:61880639-61880658 | Msa1260010:intron | 25.0% |
| ! | GTCTCATTATTGATAAACAA+AGG | - | chr8_2:61880682-61880701 | Msa1260010:intron | 25.0% |
| ! | TCATTATTGATAAACAAAGG+TGG | - | chr8_2:61880685-61880704 | Msa1260010:intron | 25.0% |
| !! | GTTTTTATCTGTTTAGCATA+TGG | - | chr8_2:61880748-61880767 | Msa1260010:intron | 25.0% |
| ! | TAACTTTATCAATGATTGCT+TGG | - | chr8_2:61880838-61880857 | Msa1260010:intron | 25.0% |
| ! | TATATAATTAGCATCTCCAA+AGG | + | chr8_2:61881446-61881465 | None:intergenic | 25.0% |
| !!! | ATATTGCTTTCTTTTTTCCT+TGG | - | chr8_2:61881809-61881828 | Msa1260010:CDS | 25.0% |
| !!! | ATTTTTTGTGACAATTGTGT+TGG | - | chr8_2:61881852-61881871 | Msa1260010:CDS | 25.0% |
| !!! | TTTTTTGTGACAATTGTGTT+GGG | - | chr8_2:61881853-61881872 | Msa1260010:CDS | 25.0% |
| ! | CAAAGTATAACATAAGGTAT+AGG | + | chr8_2:61881913-61881932 | None:intergenic | 25.0% |
| !! | ATGTACACGAACATTTTTAA+AGG | + | chr8_2:61881997-61882016 | None:intergenic | 25.0% |
| ! | CATCTTCTTTCTTCTTTTAC+CGG | + | chr8_2:61876447-61876466 | None:intergenic | 30.0% |
| AGTTCAAAACAAGCATACAA+AGG | + | chr8_2:61876572-61876591 | None:intergenic | 30.0% | |
| ATAGAAAATGCATCTCAAAG+TGG | - | chr8_2:61876897-61876916 | Msa1260010:three_prime_UTR | 30.0% | |
| !!! | GGTTTTCTTTTTTTAGGTTG+AGG | + | chr8_2:61876975-61876994 | None:intergenic | 30.0% |
| ! | GCATTGGGTTTTCTTTTTTT+AGG | + | chr8_2:61876981-61877000 | None:intergenic | 30.0% |
| !! | TAAGTTCTGAGCAAAAAAGT+TGG | - | chr8_2:61877062-61877081 | Msa1260010:CDS | 30.0% |
| ! | CGGTTTTACTTTGAATATGT+TGG | + | chr8_2:61877460-61877479 | None:intergenic | 30.0% |
| ! | TTCCTTCATATATCACCTTT+TGG | - | chr8_2:61877549-61877568 | Msa1260010:intron | 30.0% |
| ACAATAATTCAGAAGATCCA+AGG | - | chr8_2:61877651-61877670 | Msa1260010:intron | 30.0% | |
| ATTATGAATAGAGGTCAGTT+AGG | - | chr8_2:61877743-61877762 | Msa1260010:intron | 30.0% | |
| TTATGAATAGAGGTCAGTTA+GGG | - | chr8_2:61877744-61877763 | Msa1260010:intron | 30.0% | |
| !! | ATATGGACTATGGTGTTATA+TGG | - | chr8_2:61877770-61877789 | Msa1260010:intron | 30.0% |
| GGTGATGTTAGATATCATAT+TGG | - | chr8_2:61878039-61878058 | Msa1260010:intron | 30.0% | |
| AACATACATTAACCACGTTA+GGG | - | chr8_2:61878193-61878212 | Msa1260010:intron | 30.0% | |
| ACGTGACAATTATTATGAGT+GGG | + | chr8_2:61878240-61878259 | None:intergenic | 30.0% | |
| AACGTGACAATTATTATGAG+TGG | + | chr8_2:61878241-61878260 | None:intergenic | 30.0% | |
| GAGGAACTAAAATGAAAAGT+TGG | + | chr8_2:61878339-61878358 | None:intergenic | 30.0% | |
| TTATAACCCAAAAGTGAAGA+TGG | - | chr8_2:61878925-61878944 | Msa1260010:intron | 30.0% | |
| ! | AGTGAAGATGGAAATTTTTG+AGG | - | chr8_2:61878937-61878956 | Msa1260010:intron | 30.0% |
| ! | GTGAAGATGGAAATTTTTGA+GGG | - | chr8_2:61878938-61878957 | Msa1260010:intron | 30.0% |
| !! | TTTCAGCTTTAAATGCAAAC+AGG | + | chr8_2:61879141-61879160 | None:intergenic | 30.0% |
| AGCTTCAATTGAAAAATGTG+CGG | - | chr8_2:61879185-61879204 | Msa1260010:intron | 30.0% | |
| ! | AAAATGTGGAGGACATTTTT+GGG | + | chr8_2:61879435-61879454 | None:intergenic | 30.0% |
| AAAGATGAAAGAAAATGTGG+AGG | + | chr8_2:61879446-61879465 | None:intergenic | 30.0% | |
| AGATCATATGTTGAAGATGA+TGG | - | chr8_2:61879532-61879551 | Msa1260010:intron | 30.0% | |
| TGAAAAGTGAAATACCTAAG+AGG | + | chr8_2:61879607-61879626 | None:intergenic | 30.0% | |
| !!! | ACTTTTAGGACCAAGAATAA+AGG | - | chr8_2:61880028-61880047 | Msa1260010:intron | 30.0% |
| ! | TGCGTTGTTGAGATTTTAAA+TGG | - | chr8_2:61880143-61880162 | Msa1260010:intron | 30.0% |
| TTTGGAAAGCAAAGTTTCTT+GGG | - | chr8_2:61880223-61880242 | Msa1260010:intron | 30.0% | |
| TTGGGAGAAAAAAATACTTC+TGG | - | chr8_2:61880241-61880260 | Msa1260010:intron | 30.0% | |
| !! | AATTTTGGTGAATTGAGCAT+TGG | - | chr8_2:61880311-61880330 | Msa1260010:intron | 30.0% |
| !! | ATTTTGGTGAATTGAGCATT+GGG | - | chr8_2:61880312-61880331 | Msa1260010:intron | 30.0% |
| ACAATCAAAATACTTGGTTG+TGG | - | chr8_2:61880377-61880396 | Msa1260010:intron | 30.0% | |
| ! | TTATGTAGCTTTTGTTCAGT+TGG | - | chr8_2:61880500-61880519 | Msa1260010:intron | 30.0% |
| GGAAAGAAGACAATTGAAAA+GGG | + | chr8_2:61880550-61880569 | None:intergenic | 30.0% | |
| TGGAAAGAAGACAATTGAAA+AGG | + | chr8_2:61880551-61880570 | None:intergenic | 30.0% | |
| ACAAACTTGATTCTCTCATT+TGG | - | chr8_2:61880606-61880625 | Msa1260010:intron | 30.0% | |
| TGTTATGGAATTAGGACTAT+AGG | - | chr8_2:61881262-61881281 | Msa1260010:intron | 30.0% | |
| TCCTAATTAATATTTGGAGG+TGG | - | chr8_2:61881419-61881438 | Msa1260010:intron | 30.0% | |
| ACCACCTCCAAATATTAATT+AGG | + | chr8_2:61881423-61881442 | None:intergenic | 30.0% | |
| ! | ACGTTTTCCGGTCAAATTTT+AGG | + | chr8_2:61876186-61876205 | None:intergenic | 35.0% |
| GAGTTTCGAACTGAATCTAA+CGG | + | chr8_2:61876214-61876233 | None:intergenic | 35.0% | |
| AATTGAGAAAAAGGAGAACC+TGG | + | chr8_2:61876239-61876258 | None:intergenic | 35.0% | |
| GGAAAGTGGAATTGAGAAAA+AGG | + | chr8_2:61876248-61876267 | None:intergenic | 35.0% | |
| ATCAAATCGCGTTGGAAAAT+CGG | + | chr8_2:61876270-61876289 | None:intergenic | 35.0% | |
| AGGAACGACCAATTTGAAAA+GGG | + | chr8_2:61877311-61877330 | None:intergenic | 35.0% | |
| TAGGAACGACCAATTTGAAA+AGG | + | chr8_2:61877312-61877331 | None:intergenic | 35.0% | |
| !!! | TGCAGTTTTTTTTTGGTTGC+TGG | - | chr8_2:61877342-61877361 | Msa1260010:intron | 35.0% |
| GACCAAAAGGTGATATATGA+AGG | + | chr8_2:61877554-61877573 | None:intergenic | 35.0% | |
| ! | TGAAGTACTTGTAGACCAAA+AGG | + | chr8_2:61877567-61877586 | None:intergenic | 35.0% |
| TCACTTAGAATGATAAGACG+TGG | - | chr8_2:61877597-61877616 | Msa1260010:intron | 35.0% | |
| TGGTTATGCTTGGATAGTTA+CGG | - | chr8_2:61877617-61877636 | Msa1260010:intron | 35.0% | |
| ! | GCGATAACTTGATAATACCT+TGG | + | chr8_2:61877671-61877690 | None:intergenic | 35.0% |
| GTTATCGCACTGAGATTATA+TGG | - | chr8_2:61877683-61877702 | Msa1260010:intron | 35.0% | |
| TATGAATAGAGGTCAGTTAG+GGG | - | chr8_2:61877745-61877764 | Msa1260010:intron | 35.0% | |
| AATGGAAGACACTTGAGAAT+TGG | - | chr8_2:61877869-61877888 | Msa1260010:intron | 35.0% | |
| GTATAAACCAAATGCAACAC+AGG | + | chr8_2:61877957-61877976 | None:intergenic | 35.0% | |
| TATATGCATCCTAATGGCTT+CGG | - | chr8_2:61877979-61877998 | Msa1260010:intron | 35.0% | |
| CAACATACATTAACCACGTT+AGG | - | chr8_2:61878192-61878211 | Msa1260010:intron | 35.0% | |
| GACAATTATTATGAGTGGGA+TGG | + | chr8_2:61878236-61878255 | None:intergenic | 35.0% | |
| AGAGTGTGTTGAAAAGAAAG+TGG | - | chr8_2:61878413-61878432 | Msa1260010:intron | 35.0% | |
| !! | GGTGTTTGATTTTCATCGTT+TGG | + | chr8_2:61878542-61878561 | None:intergenic | 35.0% |
| TCGTGCCTTAACTTAATTTC+AGG | - | chr8_2:61878630-61878649 | Msa1260010:intron | 35.0% | |
| ! | TTTTAATGTGCTACCAGTCT+TGG | + | chr8_2:61879222-61879241 | None:intergenic | 35.0% |
| ! | CAACATTCTTTTTCCAATGC+TGG | - | chr8_2:61879243-61879262 | Msa1260010:intron | 35.0% |
| AGAGAGAGAGAGATAAAGAA+AGG | + | chr8_2:61879346-61879365 | None:intergenic | 35.0% | |
| AGAAGATAATAGCTAGGAAG+AGG | + | chr8_2:61879386-61879405 | None:intergenic | 35.0% | |
| GGAAGAAGAAGATAATAGCT+AGG | + | chr8_2:61879392-61879411 | None:intergenic | 35.0% | |
| ! | AAATGTGGAGGACATTTTTG+GGG | + | chr8_2:61879434-61879453 | None:intergenic | 35.0% |
| ! | GAAAATGTGGAGGACATTTT+TGG | + | chr8_2:61879436-61879455 | None:intergenic | 35.0% |
| !!! | TTATTTTAGGGATGGTTGTG+TGG | - | chr8_2:61879500-61879519 | Msa1260010:intron | 35.0% |
| AAGAGGAAAGAAACATGTCA+AGG | + | chr8_2:61879590-61879609 | None:intergenic | 35.0% | |
| TGACATGTTTCTTTCCTCTT+AGG | - | chr8_2:61879590-61879609 | Msa1260010:intron | 35.0% | |
| ! | TTCTGGGTGTAGATTTTAAG+AGG | - | chr8_2:61879644-61879663 | Msa1260010:intron | 35.0% |
| !! | TCTGGGTGTAGATTTTAAGA+GGG | - | chr8_2:61879645-61879664 | Msa1260010:intron | 35.0% |
| AGAGGGAGAAATTTGAGAAT+CGG | - | chr8_2:61879662-61879681 | Msa1260010:intron | 35.0% | |
| TATATATGCAGCCATACACA+TGG | + | chr8_2:61879707-61879726 | None:intergenic | 35.0% | |
| ! | TAGCAGCTTTAATATGCTCA+CGG | + | chr8_2:61880057-61880076 | None:intergenic | 35.0% |
| ! | CATTCATGTAACTGGTTCAT+TGG | + | chr8_2:61880174-61880193 | None:intergenic | 35.0% |
| ! | CTTTGGAAAGCAAAGTTTCT+TGG | - | chr8_2:61880222-61880241 | Msa1260010:intron | 35.0% |
| ! | TTTGTTCAGTTGGTATCTTG+AGG | - | chr8_2:61880510-61880529 | Msa1260010:intron | 35.0% |
| ! | TTGTTCAGTTGGTATCTTGA+GGG | - | chr8_2:61880511-61880530 | Msa1260010:intron | 35.0% |
| !!! | GCTTTCTGTTGTTTTAGCTT+TGG | - | chr8_2:61880989-61881008 | Msa1260010:intron | 35.0% |
| ! | CAGTTTGAGGGTTTTTGATA+GGG | - | chr8_2:61881036-61881055 | Msa1260010:intron | 35.0% |
| ! | AGTTTGAGGGTTTTTGATAG+GGG | - | chr8_2:61881037-61881056 | Msa1260010:intron | 35.0% |
| TCTTTCAGATGGGATCAAAT+CGG | + | chr8_2:61881339-61881358 | None:intergenic | 35.0% | |
| TTGAGACACTTCTTTCAGAT+GGG | + | chr8_2:61881349-61881368 | None:intergenic | 35.0% | |
| ATTGAGACACTTCTTTCAGA+TGG | + | chr8_2:61881350-61881369 | None:intergenic | 35.0% | |
| !! | ATCTGAAAGAAGTGTCTCAA+TGG | - | chr8_2:61881349-61881368 | Msa1260010:intron | 35.0% |
| !! | TCTGAAAGAAGTGTCTCAAT+GGG | - | chr8_2:61881350-61881369 | Msa1260010:intron | 35.0% |
| !!! | AGTTGTTTTGAGGAAGTAGT+TGG | - | chr8_2:61881586-61881605 | Msa1260010:intron | 35.0% |
| !!! | TTTTGCTGTTGCTATTTTCG+TGG | - | chr8_2:61881625-61881644 | Msa1260010:intron | 35.0% |
| TCAGAAAGGTTCTGTTAGTA+TGG | - | chr8_2:61881766-61881785 | Msa1260010:CDS | 35.0% | |
| CTGTTAGTATGGCAGTTATA+TGG | - | chr8_2:61881777-61881796 | Msa1260010:CDS | 35.0% | |
| GATGCTAAAATATGCATCCA+AGG | + | chr8_2:61881829-61881848 | None:intergenic | 35.0% | |
| AATGCTGCAAGAGGATAAAT+TGG | - | chr8_2:61881955-61881974 | Msa1260010:intron | 35.0% | |
| ATTCAGTTCGAAACTCATCC+AGG | - | chr8_2:61876218-61876237 | Msa1260010:three_prime_UTR | 40.0% | |
| TCAAATCGCGTTGGAAAATC+GGG | + | chr8_2:61876269-61876288 | None:intergenic | 40.0% | |
| TGTCGTTAATCAAATCGCGT+TGG | + | chr8_2:61876278-61876297 | None:intergenic | 40.0% | |
| ATCACACAGGTTTCCAATCA+TGG | - | chr8_2:61876322-61876341 | Msa1260010:three_prime_UTR | 40.0% | |
| ACAAGAAAATGGAACCCAAG+TGG | - | chr8_2:61876376-61876395 | Msa1260010:three_prime_UTR | 40.0% | |
| ! | GCTGAGCTTTTCTTTATCAC+CGG | - | chr8_2:61876425-61876444 | Msa1260010:three_prime_UTR | 40.0% |
| AAGCATACAAAGGTTTCCTC+TGG | + | chr8_2:61876562-61876581 | None:intergenic | 40.0% | |
| !!! | TTTTTAGGTTGAGGGACAAC+AGG | + | chr8_2:61876966-61876985 | None:intergenic | 40.0% |
| TATGCTACTCATTCCAAGTC+AGG | - | chr8_2:61877262-61877281 | Msa1260010:CDS | 40.0% | |
| !! | TGAAACAAAAGCACCTGACT+TGG | + | chr8_2:61877278-61877297 | None:intergenic | 40.0% |
| !! | AGGTGCTTTTGTTTCATCCA+TGG | - | chr8_2:61877282-61877301 | Msa1260010:CDS | 40.0% |
| CAATTTGAAAAGGGGATCCA+TGG | + | chr8_2:61877302-61877321 | None:intergenic | 40.0% | |
| ! | CATGGATCCCCTTTTCAAAT+TGG | - | chr8_2:61877300-61877319 | Msa1260010:CDS | 40.0% |
| GGAACGACCAATTTGAAAAG+GGG | + | chr8_2:61877310-61877329 | None:intergenic | 40.0% | |
| TGGTTGCTGGATTTCATTTG+TGG | - | chr8_2:61877355-61877374 | Msa1260010:intron | 40.0% | |
| TGATAAGACGTGGTTATGCT+TGG | - | chr8_2:61877607-61877626 | Msa1260010:intron | 40.0% | |
| ! | GTTAGGGGTTATATGGACTA+TGG | - | chr8_2:61877760-61877779 | Msa1260010:intron | 40.0% |
| !! | TGGGTTTGAGTTGTTTATCC+TGG | + | chr8_2:61877796-61877815 | None:intergenic | 40.0% |
| AGCTTATCCTGTGTTGCATT+TGG | - | chr8_2:61877947-61877966 | Msa1260010:intron | 40.0% | |
| ATATGCATCCTAATGGCTTC+GGG | - | chr8_2:61877980-61877999 | Msa1260010:intron | 40.0% | |
| ACATTCCGCACTAATGCTTT+CGG | - | chr8_2:61878441-61878460 | Msa1260010:intron | 40.0% | |
| !! | TAGATCCGAAAGCATTAGTG+CGG | + | chr8_2:61878449-61878468 | None:intergenic | 40.0% |
| CATTAGGGTTTGGGAAAAGA+AGG | + | chr8_2:61879096-61879115 | None:intergenic | 40.0% | |
| ! | TCCCAAACCCTAATGCTTTT+TGG | - | chr8_2:61879101-61879120 | Msa1260010:intron | 40.0% |
| !! | GCCAAAAAGCATTAGGGTTT+GGG | + | chr8_2:61879105-61879124 | None:intergenic | 40.0% |
| !! | CAAACCCTAATGCTTTTTGG+CGG | - | chr8_2:61879104-61879123 | Msa1260010:intron | 40.0% |
| !! | AAACCCTAATGCTTTTTGGC+GGG | - | chr8_2:61879105-61879124 | Msa1260010:intron | 40.0% |
| !! | AATCCCGCCAAAAAGCATTA+GGG | + | chr8_2:61879111-61879130 | None:intergenic | 40.0% |
| !! | AAATCCCGCCAAAAAGCATT+AGG | + | chr8_2:61879112-61879131 | None:intergenic | 40.0% |
| ATGGACATTTCAACCAGCAT+TGG | + | chr8_2:61879259-61879278 | None:intergenic | 40.0% | |
| GAGAGAGAGATAAAGAAAGG+AGG | + | chr8_2:61879343-61879362 | None:intergenic | 40.0% | |
| !! | AATGTGGAGGACATTTTTGG+GGG | + | chr8_2:61879433-61879452 | None:intergenic | 40.0% |
| TGAGCTCAAATCCATGTGTA+TGG | - | chr8_2:61879693-61879712 | Msa1260010:intron | 40.0% | |
| !!! | GGTGTTTCTGTTTTTTTGGC+CGG | - | chr8_2:61879866-61879885 | Msa1260010:intron | 40.0% |
| TTTGCTGAGTATGTATCAGC+TGG | - | chr8_2:61879928-61879947 | Msa1260010:intron | 40.0% | |
| !! | TGTTGGCTTTGTAGATTCAG+TGG | - | chr8_2:61879968-61879987 | Msa1260010:intron | 40.0% |
| !! | GTTGGCTTTGTAGATTCAGT+GGG | - | chr8_2:61879969-61879988 | Msa1260010:intron | 40.0% |
| !! | TTGGCTTTGTAGATTCAGTG+GGG | - | chr8_2:61879970-61879989 | Msa1260010:intron | 40.0% |
| ! | AGCAGCTTTAATATGCTCAC+GGG | + | chr8_2:61880056-61880075 | None:intergenic | 40.0% |
| TGTCTTCTTTCCAAGCATGA+AGG | - | chr8_2:61880558-61880577 | Msa1260010:intron | 40.0% | |
| GTCTTCTTTCCAAGCATGAA+GGG | - | chr8_2:61880559-61880578 | Msa1260010:intron | 40.0% | |
| ATTCTAAGTCCCTTCATGCT+TGG | + | chr8_2:61880571-61880590 | None:intergenic | 40.0% | |
| AGCATGAAGGGACTTAGAAT+AGG | - | chr8_2:61880571-61880590 | Msa1260010:intron | 40.0% | |
| GTCCTTAGTCCTTCAATATG+TGG | - | chr8_2:61880878-61880897 | Msa1260010:intron | 40.0% | |
| CTCCACATATTGAAGGACTA+AGG | + | chr8_2:61880883-61880902 | None:intergenic | 40.0% | |
| ATATGTGGAGCAACCTCATT+TGG | - | chr8_2:61880893-61880912 | Msa1260010:intron | 40.0% | |
| !!! | GATGTCATGTGTTTTAGTGC+TGG | - | chr8_2:61881013-61881032 | Msa1260010:intron | 40.0% |
| !!! | TTTTAGTGCTGGCAGTTTGA+GGG | - | chr8_2:61881024-61881043 | Msa1260010:intron | 40.0% |
| ! | GCAGTTTGAGGGTTTTTGAT+AGG | - | chr8_2:61881035-61881054 | Msa1260010:intron | 40.0% |
| ! | GTTTGAGGGTTTTTGATAGG+GGG | - | chr8_2:61881038-61881057 | Msa1260010:intron | 40.0% |
| !! | ATGGTGTTGTGTTAGTTGTG+TGG | - | chr8_2:61881215-61881234 | Msa1260010:intron | 40.0% |
| CTTAGTTCCTGCTACTGTTA+TGG | - | chr8_2:61881247-61881266 | Msa1260010:intron | 40.0% | |
| CCTAATTCCATAACAGTAGC+AGG | + | chr8_2:61881257-61881276 | None:intergenic | 40.0% | |
| CCTGCTACTGTTATGGAATT+AGG | - | chr8_2:61881254-61881273 | Msa1260010:intron | 40.0% | |
| AATATTTGGAGGTGGTCCTT+TGG | - | chr8_2:61881427-61881446 | Msa1260010:intron | 40.0% | |
| CAAGAGCTTGCCAACAATAA+AGG | - | chr8_2:61881526-61881545 | Msa1260010:intron | 40.0% | |
| CCTCGAAAGACACAAATTTG+AGG | + | chr8_2:61881562-61881581 | None:intergenic | 40.0% | |
| CCTCAAATTTGTGTCTTTCG+AGG | - | chr8_2:61881559-61881578 | Msa1260010:intron | 40.0% | |
| !! | TCGAGGAAGTAGTTGTTTTG+AGG | - | chr8_2:61881576-61881595 | Msa1260010:intron | 40.0% |
| !!! | TGTTTTGAGGAAGTAGTTGG+TGG | - | chr8_2:61881589-61881608 | Msa1260010:intron | 40.0% |
| TTGCACAGTTTCAGTGTATC+AGG | - | chr8_2:61881707-61881726 | Msa1260010:intron | 40.0% | |
| ACAGTTTCAGTGTATCAGGA+GGG | - | chr8_2:61881711-61881730 | Msa1260010:intron | 40.0% | |
| ! | TTGTGTTGGGCCTTTTATCT+TGG | - | chr8_2:61881866-61881885 | Msa1260010:intron | 40.0% |
| ! | TGTGTTGGGCCTTTTATCTT+GGG | - | chr8_2:61881867-61881886 | Msa1260010:intron | 40.0% |
| CTTCAAGATAATGCTGCAAG+AGG | - | chr8_2:61881946-61881965 | Msa1260010:intron | 40.0% | |
| CTGCAAGAGGATAAATTGGT+TGG | - | chr8_2:61881959-61881978 | Msa1260010:intron | 40.0% | |
| CAAGAGGATAAATTGGTTGG+TGG | - | chr8_2:61881962-61881981 | Msa1260010:intron | 40.0% | |
| ACACAGGTTTCCAATCATGG+CGG | - | chr8_2:61876325-61876344 | Msa1260010:three_prime_UTR | 45.0% | |
| ! | GAATTTTCCTCCGCCATGAT+TGG | + | chr8_2:61876338-61876357 | None:intergenic | 45.0% |
| !! | AAGAGTTGGTGGAACCACTT+GGG | + | chr8_2:61876393-61876412 | None:intergenic | 45.0% |
| GTTCCACCAACTCTTGTAGA+AGG | - | chr8_2:61876398-61876417 | Msa1260010:three_prime_UTR | 45.0% | |
| ACTCCTTCTACAAGAGTTGG+TGG | + | chr8_2:61876404-61876423 | None:intergenic | 45.0% | |
| GAGGTCAGTTAGGGGTTATA+TGG | - | chr8_2:61877753-61877772 | Msa1260010:intron | 45.0% | |
| !! | GACTATGGTGTTATATGGCC+AGG | - | chr8_2:61877775-61877794 | Msa1260010:intron | 45.0% |
| AGAACATGTCAAACCCTACG+TGG | - | chr8_2:61877830-61877849 | Msa1260010:intron | 45.0% | |
| ATGTCAAACCCTACGTGGTT+GGG | - | chr8_2:61877835-61877854 | Msa1260010:intron | 45.0% | |
| AGAAAAACCCCAACCACGTA+GGG | + | chr8_2:61877846-61877865 | None:intergenic | 45.0% | |
| TAGAAAAACCCCAACCACGT+AGG | + | chr8_2:61877847-61877866 | None:intergenic | 45.0% | |
| !! | GGTTGGGGTTTTTCTAGCAA+TGG | - | chr8_2:61877851-61877870 | Msa1260010:intron | 45.0% |
| !! | CGCCAAAAAGCATTAGGGTT+TGG | + | chr8_2:61879106-61879125 | None:intergenic | 45.0% |
| GGAGCAGTGTGCATACAATA+TGG | + | chr8_2:61879278-61879297 | None:intergenic | 45.0% | |
| TAGCTAGGAAGAGGAGAAGT+TGG | + | chr8_2:61879377-61879396 | None:intergenic | 45.0% | |
| !! | ACATTTTTGGGGGGAATGAG+TGG | + | chr8_2:61879423-61879442 | None:intergenic | 45.0% |
| !! | ATGTGGAGGACATTTTTGGG+GGG | + | chr8_2:61879432-61879451 | None:intergenic | 45.0% |
| !!! | TTCTGTTTTTTTGGCCGGTC+CGG | - | chr8_2:61879871-61879890 | Msa1260010:intron | 45.0% |
| CAGAACAATACAAACCGGAC+CGG | + | chr8_2:61879888-61879907 | None:intergenic | 45.0% | |
| ! | TCCGGTTTGTATTGTTCTGC+TGG | - | chr8_2:61879889-61879908 | Msa1260010:intron | 45.0% |
| CCCAGCAGAACAATACAAAC+CGG | + | chr8_2:61879893-61879912 | None:intergenic | 45.0% | |
| ! | CCGGTTTGTATTGTTCTGCT+GGG | - | chr8_2:61879890-61879909 | Msa1260010:intron | 45.0% |
| ! | TGCTCTCTGTTTTCTGCTGT+TGG | - | chr8_2:61879951-61879970 | Msa1260010:intron | 45.0% |
| !! | TGGCTTTGTAGATTCAGTGG+GGG | - | chr8_2:61879971-61879990 | Msa1260010:intron | 45.0% |
| !! | GTTCTGTTTGTTTGGTGCGT+GGG | - | chr8_2:61879993-61880012 | Msa1260010:intron | 45.0% |
| !! | TTCTGTTTGTTTGGTGCGTG+GGG | - | chr8_2:61879994-61880013 | Msa1260010:intron | 45.0% |
| !! | GGGAGCTTTGTCTCACTTTT+AGG | - | chr8_2:61880014-61880033 | Msa1260010:intron | 45.0% |
| CTCACGGGTTCCTTTATTCT+TGG | + | chr8_2:61880041-61880060 | None:intergenic | 45.0% | |
| GAGGTTGCTCCACATATTGA+AGG | + | chr8_2:61880890-61880909 | None:intergenic | 45.0% | |
| AACCTCATTTGGATGTGGCT+CGG | - | chr8_2:61880904-61880923 | Msa1260010:intron | 45.0% | |
| ! | TCGGCTATTGGTGCTTCATT+TGG | - | chr8_2:61880923-61880942 | Msa1260010:intron | 45.0% |
| ! | CGGCTATTGGTGCTTCATTT+GGG | - | chr8_2:61880924-61880943 | Msa1260010:intron | 45.0% |
| ! | GGCTATTGGTGCTTCATTTG+GGG | - | chr8_2:61880925-61880944 | Msa1260010:intron | 45.0% |
| ! | GTTTCTTGCTTTGCTGTGCT+GGG | - | chr8_2:61880947-61880966 | Msa1260010:intron | 45.0% |
| ! | TTTCTTGCTTTGCTGTGCTG+GGG | - | chr8_2:61880948-61880967 | Msa1260010:intron | 45.0% |
| !!! | CTGGGGTTTTTTGAGTTTGC+TGG | - | chr8_2:61880965-61880984 | Msa1260010:intron | 45.0% |
| !!! | GTTTTAGTGCTGGCAGTTTG+AGG | - | chr8_2:61881023-61881042 | Msa1260010:intron | 45.0% |
| ! | GATAGGGGGTTGTGTTTTCT+AGG | - | chr8_2:61881052-61881071 | Msa1260010:intron | 45.0% |
| CGGTCTCTGTATCTGTTTGT+GGG | - | chr8_2:61881083-61881102 | Msa1260010:intron | 45.0% | |
| ! | ATTGCTGCTGTGTTGACATC+AGG | - | chr8_2:61881107-61881126 | Msa1260010:intron | 45.0% |
| !!! | TGTTGTGCTGCTTTTGTTGC+CGG | - | chr8_2:61881148-61881167 | Msa1260010:intron | 45.0% |
| !! | TTTGAGGAAGTAGTTGGTGG+TGG | - | chr8_2:61881592-61881611 | Msa1260010:intron | 45.0% |
| CACAGTTTCAGTGTATCAGG+AGG | - | chr8_2:61881710-61881729 | Msa1260010:intron | 45.0% | |
| ! | GTATCAGGAGGGTGATTTTG+AGG | - | chr8_2:61881722-61881741 | Msa1260010:intron | 45.0% |
| ACCACCTTGCCCAAGATAAA+AGG | + | chr8_2:61881879-61881898 | None:intergenic | 45.0% | |
| !!! | ATATTTTCTTAAATATTTAA+AGG | - | chr8_2:61878282-61878301 | Msa1260010:intron | 5.0% |
| !!! | TATTTTCTTAAATATTTAAA+GGG | - | chr8_2:61878283-61878302 | Msa1260010:intron | 5.0% |
| !!! | TAATAATTTTAGTAAAAAAA+AGG | + | chr8_2:61879039-61879058 | None:intergenic | 5.0% |
| ! | CTAACGGCGTCAACGTTTTC+CGG | + | chr8_2:61876198-61876217 | None:intergenic | 50.0% |
| GCGTTGGAAAATCGGGAAAG+TGG | + | chr8_2:61876262-61876281 | None:intergenic | 50.0% | |
| !! | CAAGAGTTGGTGGAACCACT+TGG | + | chr8_2:61876394-61876413 | None:intergenic | 50.0% |
| GCGACTCCTTCTACAAGAGT+TGG | + | chr8_2:61876407-61876426 | None:intergenic | 50.0% | |
| CTCTGGTCAACTAATCGCTC+TGG | + | chr8_2:61876545-61876564 | None:intergenic | 50.0% | |
| ! | CAGAGCGATTAGTTGACCAG+AGG | - | chr8_2:61876543-61876562 | Msa1260010:three_prime_UTR | 50.0% |
| TGAGGGACAACAGGTGGAAA+GGG | + | chr8_2:61876957-61876976 | None:intergenic | 50.0% | |
| TTGAGGGACAACAGGTGGAA+AGG | + | chr8_2:61876958-61876977 | None:intergenic | 50.0% | |
| !! | TTAGGTTGAGGGACAACAGG+TGG | + | chr8_2:61876963-61876982 | None:intergenic | 50.0% |
| CATGTCAAACCCTACGTGGT+TGG | - | chr8_2:61877834-61877853 | Msa1260010:intron | 50.0% | |
| TGTCAAACCCTACGTGGTTG+GGG | - | chr8_2:61877836-61877855 | Msa1260010:intron | 50.0% | |
| CAAAGATGCCCGAAGCCATT+AGG | + | chr8_2:61877991-61878010 | None:intergenic | 50.0% | |
| CTAATGGCTTCGGGCATCTT+TGG | - | chr8_2:61877989-61878008 | Msa1260010:intron | 50.0% | |
| AACCACGTTAGGGACGACAT+TGG | - | chr8_2:61878203-61878222 | Msa1260010:intron | 50.0% | |
| TACCAATGTCGTCCCTAACG+TGG | + | chr8_2:61878208-61878227 | None:intergenic | 50.0% | |
| GGCTGTGTGATTACCAAGAC+TGG | - | chr8_2:61879206-61879225 | Msa1260010:intron | 50.0% | |
| !! | TTTTGGGGGGAATGAGTGGA+AGG | + | chr8_2:61879419-61879438 | None:intergenic | 50.0% |
| TTAGGGATGGTTGTGTGGCT+AGG | - | chr8_2:61879505-61879524 | Msa1260010:intron | 50.0% | |
| CAGTGGGGGTTCTGTTTGTT+TGG | - | chr8_2:61879985-61880004 | Msa1260010:intron | 50.0% | |
| !! | GGTTCTGTTTGTTTGGTGCG+TGG | - | chr8_2:61879992-61880011 | Msa1260010:intron | 50.0% |
| GGAGCAACCTCATTTGGATG+TGG | - | chr8_2:61880899-61880918 | Msa1260010:intron | 50.0% | |
| ! | TTTGGATGTGGCTCGGCTAT+TGG | - | chr8_2:61880911-61880930 | Msa1260010:intron | 50.0% |
| ! | GGTTTCTTGCTTTGCTGTGC+TGG | - | chr8_2:61880946-61880965 | Msa1260010:intron | 50.0% |
| !! | GTGTTTTCTAGGTGCTGCAG+CGG | - | chr8_2:61881063-61881082 | Msa1260010:intron | 50.0% |
| GCGGTCTCTGTATCTGTTTG+TGG | - | chr8_2:61881082-61881101 | Msa1260010:intron | 50.0% | |
| ! | GTTGACATCAGGTTGTGCAG+TGG | - | chr8_2:61881118-61881137 | Msa1260010:intron | 50.0% |
| !!! | CGGTTTGGTGTTTTGGTAGG+AGG | - | chr8_2:61881180-61881199 | Msa1260010:intron | 50.0% |
| !! | GTTTTGGTAGGAGGCATGTC+AGG | - | chr8_2:61881189-61881208 | Msa1260010:intron | 50.0% |
| !! | TAGGAGGCATGTCAGGTTGA+TGG | - | chr8_2:61881196-61881215 | Msa1260010:intron | 50.0% |
| ! | TGTTAGGCGTGATTAGCTGC+TGG | - | chr8_2:61881673-61881692 | Msa1260010:intron | 50.0% |
| ! | AGGCTTTAGTATGCGCAGCT+AGG | - | chr8_2:61881742-61881761 | Msa1260010:intron | 50.0% |
| ! | TGGGCCTTTTATCTTGGGCA+AGG | - | chr8_2:61881872-61881891 | Msa1260010:intron | 50.0% |
| ! | GCCTTTTATCTTGGGCAAGG+TGG | - | chr8_2:61881875-61881894 | Msa1260010:intron | 50.0% |
| CAGGTTTCCAATCATGGCGG+AGG | - | chr8_2:61876328-61876347 | Msa1260010:three_prime_UTR | 55.0% | |
| GAGGGACAACAGGTGGAAAG+GGG | + | chr8_2:61876956-61876975 | None:intergenic | 55.0% | |
| AGCCGAGCCACATCCAAATG+AGG | + | chr8_2:61880909-61880928 | None:intergenic | 55.0% | |
| !!! | TGTGCTGCTTTTGTTGCCGG+TGG | - | chr8_2:61881151-61881170 | Msa1260010:intron | 55.0% |
| GGATGATCCTCACTGTGTGC+AGG | - | chr8_2:61881646-61881665 | Msa1260010:intron | 55.0% | |
| TGATCCTCACTGTGTGCAGG+TGG | - | chr8_2:61881649-61881668 | Msa1260010:intron | 55.0% | |
| ACTGTGTGCAGGTGGCTGTT+AGG | - | chr8_2:61881657-61881676 | Msa1260010:intron | 55.0% | |
| ! | GCGTGATTAGCTGCTGGTCT+GGG | - | chr8_2:61881679-61881698 | Msa1260010:intron | 55.0% |
| ! | CGTGATTAGCTGCTGGTCTG+GGG | - | chr8_2:61881680-61881699 | Msa1260010:intron | 55.0% |
| ATGCGCAGCTAGGCTCAGAA+AGG | - | chr8_2:61881752-61881771 | Msa1260010:intron | 55.0% | |
| GGGGAATGAGTGGAAGGAGG+AGG | + | chr8_2:61879413-61879432 | None:intergenic | 60.0% | |
| TGGGGGGAATGAGTGGAAGG+AGG | + | chr8_2:61879416-61879435 | None:intergenic | 60.0% | |
| ACAGCCACCTGCACACAGTG+AGG | + | chr8_2:61881656-61881675 | None:intergenic | 60.0% | |
| ! | GGCGTGATTAGCTGCTGGTC+TGG | - | chr8_2:61881678-61881697 | Msa1260010:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 61876178 | 61882029 | 61876178 | ID=Msa1260010;Name=Msa1260010 |
| chr8_2 | mRNA | 61876178 | 61882029 | 61876178 | ID=Msa1260010-mRNA-1;Parent=Msa1260010;Name=Msa1260010-mRNA-1;_AED=0.41;_eAED=0.42;_QI=0|0|0.25|0.75|1|1|4|831|185 |
| chr8_2 | exon | 61876178 | 61877339 | 61876178 | ID=Msa1260010-mRNA-1:exon:19599;Parent=Msa1260010-mRNA-1 |
| chr8_2 | exon | 61878650 | 61878698 | 61878650 | ID=Msa1260010-mRNA-1:exon:19598;Parent=Msa1260010-mRNA-1 |
| chr8_2 | exon | 61881761 | 61881876 | 61881761 | ID=Msa1260010-mRNA-1:exon:19597;Parent=Msa1260010-mRNA-1 |
| chr8_2 | exon | 61881968 | 61882029 | 61881968 | ID=Msa1260010-mRNA-1:exon:19596;Parent=Msa1260010-mRNA-1 |
| chr8_2 | CDS | 61881968 | 61882029 | 61881968 | ID=Msa1260010-mRNA-1:cds;Parent=Msa1260010-mRNA-1 |
| chr8_2 | CDS | 61881761 | 61881876 | 61881761 | ID=Msa1260010-mRNA-1:cds;Parent=Msa1260010-mRNA-1 |
| chr8_2 | CDS | 61878650 | 61878698 | 61878650 | ID=Msa1260010-mRNA-1:cds;Parent=Msa1260010-mRNA-1 |
| chr8_2 | CDS | 61877009 | 61877339 | 61877009 | ID=Msa1260010-mRNA-1:cds;Parent=Msa1260010-mRNA-1 |
| chr8_2 | three_prime_UTR | 61876178 | 61877008 | 61876178 | ID=Msa1260010-mRNA-1:three_prime_utr;Parent=Msa1260010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
