Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1260410 | XP_013458030.1 | 96.952 | 525 | 8 | 2 | 1 | 524 | 1 | 518 | 0.0 | 1049 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1260410 | sp|Q4V398|RRT1_ARATH | 71.992 | 482 | 121 | 3 | 35 | 515 | 31 | 499 | 0.0 | 740 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1260410 | Msa1300250 | 0.937934 | 1.542149e-98 | -8.615850e-47 |
Msa1260410 | Msa1331160 | 0.958803 | 9.509208e-117 | -8.615850e-47 |
Msa1212890 | Msa1260410 | 0.947527 | 5.653489e-106 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1260410 | MtrunA17_Chr4g0061781 | 96.952 | 525 | 8 | 2 | 1 | 524 | 1 | 518 | 0.0 | 1049 |
Msa1260410 | MtrunA17_Chr2g0307971 | 79.198 | 524 | 91 | 4 | 3 | 524 | 12 | 519 | 0.0 | 846 |
Msa1260410 | MtrunA17_Chr6g0455571 | 76.507 | 481 | 103 | 2 | 40 | 520 | 43 | 513 | 0.0 | 774 |
Msa1260410 | MtrunA17_Chr5g0417871 | 60.168 | 477 | 177 | 5 | 42 | 514 | 9 | 476 | 0.0 | 595 |
Msa1260410 | MtrunA17_Chr4g0042711 | 59.874 | 476 | 177 | 4 | 40 | 514 | 26 | 488 | 0.0 | 593 |
Msa1260410 | MtrunA17_Chr4g0070551 | 47.990 | 398 | 193 | 5 | 114 | 510 | 227 | 611 | 5.44e-128 | 387 |
Msa1260410 | MtrunA17_Chr5g0426591 | 47.922 | 409 | 197 | 5 | 114 | 514 | 110 | 510 | 1.16e-127 | 382 |
Msa1260410 | MtrunA17_Chr4g0008451 | 48.492 | 398 | 191 | 5 | 114 | 510 | 231 | 615 | 1.23e-125 | 381 |
Msa1260410 | MtrunA17_Chr5g0436321 | 46.359 | 412 | 204 | 7 | 116 | 523 | 162 | 560 | 2.50e-124 | 375 |
Msa1260410 | MtrunA17_Chr3g0132371 | 48.293 | 410 | 189 | 7 | 115 | 514 | 141 | 537 | 2.30e-120 | 364 |
Msa1260410 | MtrunA17_Chr3g0129981 | 44.419 | 430 | 214 | 9 | 105 | 521 | 100 | 517 | 1.34e-113 | 346 |
Msa1260410 | MtrunA17_Chr5g0399311 | 41.667 | 408 | 217 | 9 | 108 | 514 | 117 | 504 | 7.13e-92 | 290 |
Msa1260410 | MtrunA17_Chr4g0056061 | 40.865 | 416 | 227 | 8 | 108 | 522 | 101 | 498 | 1.24e-90 | 287 |
Msa1260410 | MtrunA17_Chr3g0143821 | 41.791 | 402 | 213 | 8 | 114 | 514 | 110 | 491 | 2.10e-90 | 288 |
Msa1260410 | MtrunA17_Chr5g0448581 | 38.530 | 449 | 234 | 10 | 68 | 514 | 90 | 498 | 8.04e-87 | 278 |
Msa1260410 | MtrunA17_Chr1g0204121 | 39.529 | 425 | 210 | 13 | 104 | 514 | 82 | 473 | 1.77e-82 | 265 |
Msa1260410 | MtrunA17_Chr5g0412251 | 34.369 | 483 | 242 | 13 | 64 | 511 | 56 | 498 | 8.17e-81 | 261 |
Msa1260410 | MtrunA17_Chr3g0132951 | 34.167 | 480 | 239 | 11 | 68 | 511 | 74 | 512 | 3.21e-80 | 259 |
Msa1260410 | MtrunA17_Chr1g0160781 | 36.019 | 422 | 233 | 11 | 114 | 518 | 148 | 549 | 1.19e-77 | 254 |
Msa1260410 | MtrunA17_Chr4g0043911 | 36.256 | 422 | 232 | 11 | 114 | 518 | 149 | 550 | 2.24e-77 | 253 |
Msa1260410 | MtrunA17_Chr5g0424241 | 38.118 | 425 | 221 | 13 | 116 | 517 | 158 | 563 | 2.77e-77 | 254 |
Msa1260410 | MtrunA17_Chr3g0123521 | 36.111 | 396 | 222 | 8 | 114 | 492 | 149 | 530 | 4.13e-77 | 252 |
Msa1260410 | MtrunA17_Chr3g0077321 | 35.797 | 433 | 241 | 11 | 106 | 519 | 138 | 552 | 5.95e-76 | 249 |
Msa1260410 | MtrunA17_Chr1g0204141 | 36.768 | 427 | 222 | 13 | 104 | 514 | 82 | 476 | 3.45e-74 | 244 |
Msa1260410 | MtrunA17_Chr2g0284071 | 36.473 | 414 | 212 | 12 | 109 | 481 | 209 | 612 | 4.00e-71 | 239 |
Msa1260410 | MtrunA17_Chr3g0087291 | 36.667 | 390 | 223 | 9 | 110 | 493 | 167 | 538 | 4.56e-68 | 229 |
Msa1260410 | MtrunA17_Chr4g0075311 | 34.607 | 445 | 228 | 11 | 115 | 514 | 164 | 590 | 9.29e-65 | 221 |
Msa1260410 | MtrunA17_Chr4g0010511 | 37.203 | 379 | 219 | 7 | 118 | 493 | 236 | 598 | 2.74e-64 | 220 |
Msa1260410 | MtrunA17_Chr4g0003561 | 34.903 | 361 | 197 | 10 | 114 | 464 | 74 | 406 | 2.73e-55 | 192 |
Msa1260410 | MtrunA17_Chr7g0240241 | 58.871 | 124 | 47 | 1 | 282 | 401 | 1 | 124 | 1.02e-44 | 154 |
Msa1260410 | MtrunA17_Chr1g0146501 | 37.276 | 279 | 152 | 9 | 114 | 378 | 89 | 358 | 3.82e-40 | 154 |
Msa1260410 | MtrunA17_Chr3g0127811 | 32.948 | 346 | 183 | 12 | 46 | 378 | 9 | 318 | 5.57e-39 | 148 |
Msa1260410 | MtrunA17_Chr7g0220381 | 30.820 | 305 | 184 | 8 | 114 | 402 | 97 | 390 | 2.72e-37 | 145 |
Msa1260410 | MtrunA17_Chr1g0172911 | 63.768 | 69 | 8 | 2 | 112 | 163 | 18 | 86 | 1.24e-19 | 85.1 |
Msa1260410 | MtrunA17_Chr2g0298881 | 23.607 | 377 | 220 | 13 | 93 | 452 | 10 | 335 | 2.64e-17 | 83.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1260410 | AT5G15740.1 | 71.992 | 482 | 121 | 3 | 35 | 515 | 31 | 499 | 0.0 | 740 |
Msa1260410 | AT3G02250.1 | 72.117 | 477 | 119 | 3 | 40 | 515 | 36 | 499 | 0.0 | 726 |
Msa1260410 | AT1G14020.1 | 59.283 | 474 | 174 | 4 | 42 | 514 | 27 | 482 | 0.0 | 595 |
Msa1260410 | AT2G03280.1 | 56.394 | 477 | 182 | 7 | 40 | 514 | 28 | 480 | 0.0 | 555 |
Msa1260410 | AT2G03280.2 | 53.373 | 504 | 182 | 8 | 40 | 514 | 28 | 507 | 0.0 | 541 |
Msa1260410 | AT2G37980.1 | 49.628 | 403 | 188 | 7 | 114 | 514 | 225 | 614 | 6.24e-130 | 392 |
Msa1260410 | AT5G01100.1 | 48.039 | 408 | 185 | 7 | 112 | 510 | 213 | 602 | 1.61e-125 | 381 |
Msa1260410 | AT3G54100.1 | 47.146 | 403 | 198 | 7 | 114 | 514 | 221 | 610 | 9.13e-123 | 374 |
Msa1260410 | AT1G22460.1 | 45.283 | 424 | 205 | 7 | 105 | 514 | 146 | 556 | 6.51e-122 | 369 |
Msa1260410 | AT5G35570.1 | 46.970 | 396 | 196 | 6 | 116 | 510 | 252 | 634 | 8.86e-122 | 372 |
Msa1260410 | AT5G64600.1 | 43.519 | 432 | 216 | 9 | 102 | 519 | 101 | 518 | 1.54e-112 | 344 |
Msa1260410 | AT4G38390.1 | 41.791 | 402 | 214 | 8 | 114 | 514 | 122 | 504 | 7.97e-93 | 294 |
Msa1260410 | AT1G76270.1 | 42.015 | 407 | 212 | 8 | 110 | 514 | 101 | 485 | 3.45e-91 | 290 |
Msa1260410 | AT1G20550.1 | 40.095 | 419 | 213 | 10 | 110 | 519 | 104 | 493 | 6.10e-91 | 289 |
Msa1260410 | AT4G16650.2 | 41.565 | 409 | 218 | 9 | 107 | 514 | 114 | 502 | 2.01e-85 | 275 |
Msa1260410 | AT4G16650.1 | 41.565 | 409 | 218 | 9 | 107 | 514 | 114 | 502 | 2.01e-85 | 275 |
Msa1260410 | AT4G24530.1 | 34.864 | 479 | 237 | 10 | 68 | 511 | 75 | 513 | 1.40e-82 | 266 |
Msa1260410 | AT1G04910.1 | 39.667 | 421 | 228 | 11 | 108 | 523 | 83 | 482 | 4.07e-81 | 262 |
Msa1260410 | AT1G38065.2 | 37.435 | 382 | 209 | 10 | 115 | 480 | 26 | 393 | 1.26e-79 | 256 |
Msa1260410 | AT1G38065.1 | 37.435 | 382 | 209 | 10 | 115 | 480 | 36 | 403 | 2.20e-79 | 256 |
Msa1260410 | AT5G65470.1 | 34.304 | 481 | 239 | 12 | 68 | 511 | 59 | 499 | 5.49e-79 | 256 |
Msa1260410 | AT3G26370.1 | 35.980 | 403 | 225 | 9 | 107 | 492 | 152 | 538 | 1.72e-78 | 256 |
Msa1260410 | AT1G38131.1 | 37.435 | 382 | 209 | 10 | 115 | 480 | 155 | 522 | 2.33e-78 | 257 |
Msa1260410 | AT1G35510.1 | 35.745 | 470 | 237 | 15 | 68 | 516 | 134 | 559 | 1.50e-76 | 252 |
Msa1260410 | AT2G01480.1 | 34.597 | 422 | 239 | 11 | 114 | 518 | 153 | 554 | 8.93e-74 | 244 |
Msa1260410 | AT5G63390.1 | 37.533 | 381 | 216 | 7 | 118 | 493 | 167 | 530 | 1.62e-73 | 243 |
Msa1260410 | AT2G01480.2 | 36.216 | 370 | 211 | 7 | 114 | 468 | 153 | 512 | 2.26e-73 | 242 |
Msa1260410 | AT1G14970.3 | 35.492 | 386 | 221 | 8 | 115 | 485 | 9 | 381 | 5.51e-73 | 238 |
Msa1260410 | AT1G11990.1 | 37.590 | 415 | 225 | 12 | 116 | 514 | 191 | 587 | 5.78e-73 | 243 |
Msa1260410 | AT1G14970.2 | 35.492 | 386 | 221 | 8 | 115 | 485 | 35 | 407 | 1.16e-72 | 238 |
Msa1260410 | AT1G14970.1 | 35.492 | 386 | 221 | 8 | 115 | 485 | 155 | 527 | 2.11e-71 | 238 |
Msa1260410 | AT1G62330.1 | 34.157 | 445 | 229 | 11 | 116 | 514 | 222 | 648 | 3.91e-71 | 239 |
Msa1260410 | AT1G11990.2 | 34.513 | 452 | 225 | 12 | 116 | 514 | 176 | 609 | 1.55e-67 | 229 |
Msa1260410 | AT2G44500.1 | 36.292 | 383 | 220 | 7 | 118 | 494 | 180 | 544 | 2.56e-67 | 228 |
Msa1260410 | AT1G29200.4 | 35.523 | 411 | 206 | 9 | 115 | 481 | 70 | 465 | 5.10e-66 | 222 |
Msa1260410 | AT1G29200.1 | 35.523 | 411 | 206 | 9 | 115 | 481 | 70 | 465 | 5.10e-66 | 222 |
Msa1260410 | AT1G29200.2 | 35.523 | 411 | 206 | 9 | 115 | 481 | 186 | 581 | 4.19e-65 | 223 |
Msa1260410 | AT1G29200.3 | 35.222 | 406 | 204 | 9 | 120 | 481 | 1 | 391 | 1.57e-63 | 213 |
Msa1260410 | AT3G07900.1 | 34.197 | 386 | 224 | 6 | 118 | 494 | 191 | 555 | 2.83e-62 | 214 |
Msa1260410 | AT1G52630.1 | 35.165 | 364 | 200 | 11 | 114 | 469 | 73 | 408 | 7.28e-55 | 191 |
Msa1260410 | AT1G52630.2 | 34.018 | 341 | 196 | 10 | 137 | 469 | 1 | 320 | 1.28e-48 | 172 |
Msa1260410 | AT3G03810.2 | 32.362 | 309 | 184 | 7 | 109 | 402 | 83 | 381 | 8.05e-44 | 165 |
Msa1260410 | AT3G03810.1 | 32.362 | 309 | 184 | 7 | 109 | 402 | 83 | 381 | 8.05e-44 | 165 |
Msa1260410 | AT3G26370.2 | 37.321 | 209 | 111 | 5 | 107 | 306 | 152 | 349 | 1.18e-38 | 145 |
Msa1260410 | AT3G30300.2 | 31.683 | 303 | 181 | 8 | 108 | 396 | 96 | 386 | 9.47e-37 | 144 |
Msa1260410 | AT3G30300.1 | 31.683 | 303 | 181 | 8 | 108 | 396 | 96 | 386 | 9.47e-37 | 144 |
Msa1260410 | AT2G44500.2 | 36.929 | 241 | 131 | 6 | 118 | 352 | 180 | 405 | 1.71e-34 | 135 |
Msa1260410 | AT1G51630.1 | 25.316 | 316 | 187 | 13 | 141 | 446 | 110 | 386 | 4.65e-15 | 77.8 |
Find 191 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTATAAAGTTTACCAATTT+TGG | 0.010006 | 8_2:-62412607 | None:intergenic |
TAACTTCACTCTTTGGAATT+TGG | 0.117923 | 8_2:-62410063 | None:intergenic |
CTTTAATTAAATCTACATTT+AGG | 0.125271 | 8_2:+62410513 | Msa1260410:five_prime_UTR |
TTCATATTCATATACAAATT+TGG | 0.156437 | 8_2:+62413772 | Msa1260410:three_prime_UTR |
CATTTCTGGTCCTTCATCTT+AGG | 0.184507 | 8_2:+62412182 | Msa1260410:CDS |
CATATACAAATTTGGATTAC+TGG | 0.218193 | 8_2:+62413780 | Msa1260410:three_prime_UTR |
CTGCGATGCAGAGTTAATTT+TGG | 0.222827 | 8_2:+62412088 | Msa1260410:CDS |
CTAGCTTCGGGTTCGGGTTT+AGG | 0.230091 | 8_2:+62410632 | Msa1260410:CDS |
ATAGAAATAATCCTCTTCTT+TGG | 0.235561 | 8_2:-62413336 | None:intergenic |
TTTAATTAAATCTACATTTA+GGG | 0.261089 | 8_2:+62410514 | Msa1260410:five_prime_UTR |
CTCTGGAGGTTGGCCGTTAT+TGG | 0.266699 | 8_2:-62412056 | None:intergenic |
TAACTACAAGTGGCAAGATT+TGG | 0.276036 | 8_2:+62410577 | Msa1260410:CDS |
CATTGCTTATACAGATATCT+TGG | 0.286701 | 8_2:+62413152 | Msa1260410:intron |
CCATGGTTAACTTCACTCTT+TGG | 0.290644 | 8_2:-62410070 | None:intergenic |
AACTTGATAAAACATCCTTT+TGG | 0.293087 | 8_2:+62411555 | Msa1260410:CDS |
GTGGGGTCCTCGAGTTCTTA+AGG | 0.294055 | 8_2:+62410757 | Msa1260410:CDS |
GAGAGACTAGCTTCGGGTTC+GGG | 0.295532 | 8_2:+62410626 | Msa1260410:CDS |
CCTTCACAGCTGAAGAAAAT+TGG | 0.303272 | 8_2:-62413256 | None:intergenic |
AAGCGTGACATTTAAATATC+TGG | 0.308808 | 8_2:-62411522 | None:intergenic |
TAGAAATAATCCTCTTCTTT+GGG | 0.308913 | 8_2:-62413335 | None:intergenic |
TCCTCTTCTTTGGGCTTGTC+AGG | 0.310596 | 8_2:-62413326 | None:intergenic |
TTCAAAGGAGTACCCAAAAT+TGG | 0.312076 | 8_2:+62412594 | Msa1260410:CDS |
AGGTGAAGTGTGAGAGAAAA+TGG | 0.325545 | 8_2:-62410261 | None:intergenic |
TCGGGTTTAGGTTCGGGTTC+AGG | 0.327831 | 8_2:+62410644 | Msa1260410:CDS |
TTCGGGTTCGGGTTTAGGTT+CGG | 0.328399 | 8_2:+62410637 | Msa1260410:CDS |
ACAATAACGGTGCACTGAAC+TGG | 0.336008 | 8_2:+62413231 | Msa1260410:CDS |
GAGCATCCGTTCTATTTAGA+TGG | 0.341371 | 8_2:-62412027 | None:intergenic |
GTTAGCAAGGTTGTAGGTAT+AGG | 0.342764 | 8_2:+62410097 | Msa1260410:five_prime_UTR |
TCGGGTTCGGGTTTAGGTTC+GGG | 0.348733 | 8_2:+62410638 | Msa1260410:CDS |
TGGGGTCCTCGAGTTCTTAA+GGG | 0.351334 | 8_2:+62410758 | Msa1260410:CDS |
TCCCACATATGATGGAAATA+TGG | 0.356947 | 8_2:+62412823 | Msa1260410:CDS |
CTACTCAGCATATCATTTGA+TGG | 0.359944 | 8_2:-62413383 | None:intergenic |
GAAAGGTGATCAAGCTTCTA+AGG | 0.362439 | 8_2:+62412149 | Msa1260410:CDS |
ATTGCAGCCGGTGAAATATA+TGG | 0.367188 | 8_2:+62412547 | Msa1260410:CDS |
AACTACAAGTGGCAAGATTT+GGG | 0.370307 | 8_2:+62410578 | Msa1260410:CDS |
GCATGGGTAACCCTAGTAAA+AGG | 0.373604 | 8_2:+62413294 | Msa1260410:CDS |
GCAGTCTCCTCGGGTGTTAG+AGG | 0.386334 | 8_2:-62412478 | None:intergenic |
CTTCTTCCTTCTTCGCTCTC+CGG | 0.393711 | 8_2:+62410212 | Msa1260410:five_prime_UTR |
TGCACTCACCCTGCAATGTC+AGG | 0.395485 | 8_2:-62413722 | None:intergenic |
AGAGAGACTAGCTTCGGGTT+CGG | 0.397228 | 8_2:+62410625 | Msa1260410:CDS |
GATGGTTCTAAACATTCCTC+TGG | 0.405353 | 8_2:-62413365 | None:intergenic |
TTAAACTATAGAACGAGTTA+AGG | 0.407474 | 8_2:+62410031 | Msa1260410:five_prime_UTR |
CTAAGATGAAGGACCAGAAA+TGG | 0.413370 | 8_2:-62412181 | None:intergenic |
GGGAAATGTTGTTGAATTTG+AGG | 0.413426 | 8_2:-62410290 | None:intergenic |
TTCATCTCAGATGGCAGCAT+TGG | 0.420480 | 8_2:+62412766 | Msa1260410:CDS |
CATCGCAGCTTCTGAATCTC+TGG | 0.422154 | 8_2:-62412073 | None:intergenic |
TAACTCTTGGGAGGAAGAAC+TGG | 0.422934 | 8_2:-62410863 | None:intergenic |
AGTAGCCACCCTGACATTGC+AGG | 0.431352 | 8_2:+62413713 | Msa1260410:three_prime_UTR |
GGCCATATTTCCATCATATG+TGG | 0.431890 | 8_2:-62412825 | None:intergenic |
ATAGTTCAATTAACAGCTAT+AGG | 0.432577 | 8_2:+62410728 | Msa1260410:CDS |
TGTCAAGAGCCCTTAGTGTA+AGG | 0.436508 | 8_2:-62412501 | None:intergenic |
CACTTCTCAGATAGAGGAGT+TGG | 0.437132 | 8_2:+62412123 | Msa1260410:CDS |
ATTGCTTATACAGATATCTT+GGG | 0.438384 | 8_2:+62413153 | Msa1260410:intron |
AAATAGAACGGATGCTCGGC+TGG | 0.442470 | 8_2:+62412033 | Msa1260410:CDS |
TAAACTATAGAACGAGTTAA+GGG | 0.444344 | 8_2:+62410032 | Msa1260410:five_prime_UTR |
GTGGCAAGATTTGGGTTGGA+TGG | 0.446241 | 8_2:+62410586 | Msa1260410:CDS |
ACTGTATTTCTTGTCTGCAT+TGG | 0.449364 | 8_2:+62410407 | Msa1260410:five_prime_UTR |
GCGGTGGCCCGCAACTACTT+TGG | 0.453403 | 8_2:-62412846 | None:intergenic |
GGTTAGGTTAGCAAGGTTGT+AGG | 0.453647 | 8_2:+62410091 | Msa1260410:five_prime_UTR |
AACAGCTATAGGTGATTTGT+GGG | 0.454993 | 8_2:+62410739 | Msa1260410:CDS |
TGCTTCAAATTCTAGAGCGT+TGG | 0.455802 | 8_2:+62410814 | Msa1260410:CDS |
TAGTGTAAGGGCAGTCTCCT+CGG | 0.458304 | 8_2:-62412488 | None:intergenic |
AGTGTAAGGGCAGTCTCCTC+GGG | 0.459191 | 8_2:-62412487 | None:intergenic |
GAGTGAAGTTAACCATGGTT+AGG | 0.461961 | 8_2:+62410075 | Msa1260410:five_prime_UTR |
TTTGGGTTGGATGGGTTTGA+AGG | 0.463262 | 8_2:+62410595 | Msa1260410:CDS |
TAACAGCTATAGGTGATTTG+TGG | 0.466819 | 8_2:+62410738 | Msa1260410:CDS |
TACTTGATGGTTTCGTGCAA+TGG | 0.469164 | 8_2:+62411094 | Msa1260410:CDS |
ACACTATGCCACCCGTTAGT+TGG | 0.471268 | 8_2:+62411826 | Msa1260410:CDS |
TTAGGTTCGGGTTCAGGAAG+AGG | 0.473618 | 8_2:+62410650 | Msa1260410:CDS |
TTCTAAACATTCCTCTGGGT+TGG | 0.473630 | 8_2:-62413360 | None:intergenic |
GATCCACATCAAATATGTCT+TGG | 0.475690 | 8_2:-62411716 | None:intergenic |
GATAGAGGAGTTGGGCAGAA+AGG | 0.478505 | 8_2:+62412132 | Msa1260410:CDS |
TTCTCCACCATATATTTCAC+CGG | 0.478724 | 8_2:-62412554 | None:intergenic |
GAGATTCACTTCTCAGATAG+AGG | 0.481620 | 8_2:+62412117 | Msa1260410:CDS |
AGAGAAAATGGAAGGTGCTC+CGG | 0.489352 | 8_2:-62410249 | None:intergenic |
TGGCAAGATTTGGGTTGGAT+GGG | 0.493030 | 8_2:+62410587 | Msa1260410:CDS |
GCCATATTTCCATCATATGT+GGG | 0.493891 | 8_2:-62412824 | None:intergenic |
TCCTAGACTCAAGCTGAAAG+TGG | 0.496928 | 8_2:+62411788 | Msa1260410:CDS |
TGGTGGCCGGAGAGCGAAGA+AGG | 0.499510 | 8_2:-62410218 | None:intergenic |
GATGCTCGGCTGGCCAATAA+CGG | 0.501292 | 8_2:+62412043 | Msa1260410:CDS |
AATATGGCCAAAGTAGTTGC+GGG | 0.503736 | 8_2:+62412839 | Msa1260410:CDS |
GCAGATATGCCTATCCTTGG+TGG | 0.504562 | 8_2:+62412407 | Msa1260410:intron |
TCACCTAGGATCAGCCCAAA+AGG | 0.506855 | 8_2:-62411570 | None:intergenic |
ATTACTGGATCTGCAGTTTG+TGG | 0.507334 | 8_2:+62413795 | Msa1260410:three_prime_UTR |
ATGGTTCTAAACATTCCTCT+GGG | 0.512898 | 8_2:-62413364 | None:intergenic |
TCAAAATCATTCATCTCAGA+TGG | 0.513509 | 8_2:+62412757 | Msa1260410:CDS |
CAATAACGGTGCACTGAACT+GGG | 0.514418 | 8_2:+62413232 | Msa1260410:CDS |
AGGAGACTGCCCTTACACTA+AGG | 0.518063 | 8_2:+62412491 | Msa1260410:CDS |
GTCCTCGAGTTCTTAAGGGT+TGG | 0.518145 | 8_2:+62410762 | Msa1260410:CDS |
GATATGTCGGACCAACTAAC+GGG | 0.522657 | 8_2:-62411837 | None:intergenic |
TAGCACGTGACAAATGTGTT+TGG | 0.523017 | 8_2:+62413403 | Msa1260410:exon |
ACAAGTGGCAAGATTTGGGT+TGG | 0.524017 | 8_2:+62410582 | Msa1260410:CDS |
CAACTACAACGGTGATATTG+TGG | 0.525187 | 8_2:+62410699 | Msa1260410:CDS |
TCTAATCAAGCAAAAGCAGC+CGG | 0.526158 | 8_2:+62413591 | Msa1260410:three_prime_UTR |
TGTTGAATTTGAGGAAATGA+AGG | 0.526671 | 8_2:-62410281 | None:intergenic |
CTAATCAAGCAAAAGCAGCC+GGG | 0.527698 | 8_2:+62413592 | Msa1260410:three_prime_UTR |
TTGGCAGATATGCCTATCCT+TGG | 0.528212 | 8_2:+62412404 | Msa1260410:intron |
CCATCTCATACCTAAGATGA+AGG | 0.530904 | 8_2:-62412192 | None:intergenic |
TTTCTCTTTCCACCAAGGAT+AGG | 0.532477 | 8_2:-62412416 | None:intergenic |
AAGTAGTTGCGGGCCACCGC+AGG | 0.534311 | 8_2:+62412849 | Msa1260410:CDS |
GGTAGAAAACCAAGTGTACC+AGG | 0.535579 | 8_2:-62413456 | None:intergenic |
TCTTTCCTCACCACCTCCAT+CGG | 0.538194 | 8_2:+62410171 | Msa1260410:five_prime_UTR |
ATTAGTTGATAACTTCGATC+CGG | 0.538834 | 8_2:+62410456 | Msa1260410:five_prime_UTR |
GCTTCTGAATCTCTGGAGGT+TGG | 0.538969 | 8_2:-62412066 | None:intergenic |
ACTTCTCAGATAGAGGAGTT+GGG | 0.542802 | 8_2:+62412124 | Msa1260410:CDS |
TCCACTTTCAGCTTGAGTCT+AGG | 0.545468 | 8_2:-62411789 | None:intergenic |
GTACCATCTCCTGGTACACT+TGG | 0.549848 | 8_2:+62413447 | Msa1260410:three_prime_UTR |
TCCGACTTGAAAAGAAGAGA+TGG | 0.552608 | 8_2:+62412448 | Msa1260410:CDS |
CCTTCATCTTAGGTATGAGA+TGG | 0.553344 | 8_2:+62412192 | Msa1260410:CDS |
ACATAGAGAAAAGGTGGAGT+GGG | 0.554622 | 8_2:+62413551 | Msa1260410:three_prime_UTR |
GAATCAAATGAGAGCAGCGG+TGG | 0.555058 | 8_2:+62411123 | Msa1260410:CDS |
TAACCATGGTTAGGTTAGCA+AGG | 0.555353 | 8_2:+62410084 | Msa1260410:five_prime_UTR |
TTTGTGGAAGCTTAAACCAC+TGG | 0.555485 | 8_2:+62413811 | Msa1260410:three_prime_UTR |
AAGAGGCAGACATAGAGAAA+AGG | 0.556274 | 8_2:+62413542 | Msa1260410:three_prime_UTR |
TTAATAGATCAGTACAATAA+CGG | 0.557119 | 8_2:+62413218 | Msa1260410:CDS |
ATCTAAATAGAACGGATGCT+CGG | 0.559630 | 8_2:+62412029 | Msa1260410:CDS |
TCCTGACAAGCCCAAAGAAG+AGG | 0.560213 | 8_2:+62413325 | Msa1260410:CDS |
TAACGGGTGGCATAGTGTAA+AGG | 0.560749 | 8_2:-62411821 | None:intergenic |
ATTCCAAGACATATTTGATG+TGG | 0.563275 | 8_2:+62411713 | Msa1260410:CDS |
GGAATCACATGCTCATCGCA+TGG | 0.564447 | 8_2:+62413277 | Msa1260410:CDS |
TGAAAGAAACGAAGGTCGGA+TGG | 0.564661 | 8_2:-62412737 | None:intergenic |
AATATTATAGCCGATGGAGG+TGG | 0.565451 | 8_2:-62410181 | None:intergenic |
GGTCAGGAAGGAAACACTGT+TGG | 0.565664 | 8_2:+62412712 | Msa1260410:intron |
GACATTTAAATATCTGGCAA+TGG | 0.566411 | 8_2:-62411516 | None:intergenic |
TCCGGCCACCACATTCTCGC+CGG | 0.567955 | 8_2:+62410230 | Msa1260410:five_prime_UTR |
TGGAAGAGTTGACAAGAATG+AGG | 0.569684 | 8_2:+62412263 | Msa1260410:CDS |
TGAATGAATATTATAGCCGA+TGG | 0.570106 | 8_2:-62410187 | None:intergenic |
GTTGTTGAAACAGGTCAGGA+AGG | 0.574070 | 8_2:+62412700 | Msa1260410:intron |
TCCGGCGAGAATGTGGTGGC+CGG | 0.576218 | 8_2:-62410231 | None:intergenic |
TATCACATCCTTGAGAGATG+AGG | 0.579093 | 8_2:+62411743 | Msa1260410:CDS |
GTAAAAGCAATAACTACAAG+TGG | 0.579123 | 8_2:+62410567 | Msa1260410:CDS |
TTGATGGTTTCGTGCAATGG+AGG | 0.581174 | 8_2:+62411097 | Msa1260410:CDS |
AAGACGGACAAGTCTTTCAA+AGG | 0.582155 | 8_2:+62412579 | Msa1260410:CDS |
GTCAAGAGCCCTTAGTGTAA+GGG | 0.585333 | 8_2:-62412500 | None:intergenic |
CGCAGCTTCTGAATCTCTGG+AGG | 0.585943 | 8_2:-62412070 | None:intergenic |
AGGCAGACATAGAGAAAAGG+TGG | 0.587640 | 8_2:+62413545 | Msa1260410:three_prime_UTR |
AAATATGGCCAAAGTAGTTG+CGG | 0.588468 | 8_2:+62412838 | Msa1260410:CDS |
GGAGACTGCCCTTACACTAA+GGG | 0.590801 | 8_2:+62412492 | Msa1260410:CDS |
ATTCAAATCTACATTGCAGC+CGG | 0.591935 | 8_2:+62412535 | Msa1260410:CDS |
AGATATGTCGGACCAACTAA+CGG | 0.593775 | 8_2:-62411838 | None:intergenic |
ACTTTCAGCTTGAGTCTAGG+AGG | 0.594125 | 8_2:-62411786 | None:intergenic |
TAATCAAGCAAAAGCAGCCG+GGG | 0.595445 | 8_2:+62413593 | Msa1260410:three_prime_UTR |
GTTCTTATAGTAAGATATGT+CGG | 0.596661 | 8_2:-62411850 | None:intergenic |
GAATCACATGCTCATCGCAT+GGG | 0.597465 | 8_2:+62413278 | Msa1260410:CDS |
CAAATGAGAGCAGCGGTGGG+TGG | 0.599497 | 8_2:+62411127 | Msa1260410:CDS |
TATCCGCACCTCATCTCTCA+AGG | 0.599568 | 8_2:-62411751 | None:intergenic |
GGGTAACCCTAGTAAAAGGT+TGG | 0.602245 | 8_2:+62413298 | Msa1260410:CDS |
AAGGTTGTAGGTATAGGTGT+AGG | 0.604783 | 8_2:+62410103 | Msa1260410:five_prime_UTR |
GACATAGAGAAAAGGTGGAG+TGG | 0.608814 | 8_2:+62413550 | Msa1260410:three_prime_UTR |
GCACTCACCCTGCAATGTCA+GGG | 0.610228 | 8_2:-62413721 | None:intergenic |
CTCTTGGGAGGAAGAACTGG+TGG | 0.610292 | 8_2:-62410860 | None:intergenic |
GCTACTATACAAGAATGTGA+TGG | 0.611987 | 8_2:-62413696 | None:intergenic |
CCAAAGAGTGAAGTTAACCA+TGG | 0.612692 | 8_2:+62410070 | Msa1260410:five_prime_UTR |
AGTTGTCCATCTAAATAGAA+CGG | 0.613720 | 8_2:+62412021 | Msa1260410:CDS |
AGGTTGTAACAGTGATGAGG+TGG | 0.616448 | 8_2:+62412243 | Msa1260410:CDS |
TATATGGTGGAGAAAGAAGA+CGG | 0.616742 | 8_2:+62412563 | Msa1260410:CDS |
GTTGTTCAACGAAACGACAC+CGG | 0.622229 | 8_2:-62410475 | None:intergenic |
GTGCTCCGGCGAGAATGTGG+TGG | 0.627301 | 8_2:-62410235 | None:intergenic |
AAACCAAGTGTACCAGGAGA+TGG | 0.627844 | 8_2:-62413450 | None:intergenic |
GTAGCCACCCTGACATTGCA+GGG | 0.630817 | 8_2:+62413714 | Msa1260410:three_prime_UTR |
AAACTATAGAACGAGTTAAG+GGG | 0.632455 | 8_2:+62410033 | Msa1260410:five_prime_UTR |
AAAAGGTACTAACTCTTGGG+AGG | 0.632505 | 8_2:-62410872 | None:intergenic |
GAGCTAATTCAATAAATCTG+TGG | 0.633440 | 8_2:-62413477 | None:intergenic |
CATATCTTACTATAAGAACC+AGG | 0.641279 | 8_2:+62411854 | Msa1260410:CDS |
GGCCAACCCTTAAGAACTCG+AGG | 0.641899 | 8_2:-62410764 | None:intergenic |
TATAGCCGATGGAGGTGGTG+AGG | 0.645162 | 8_2:-62410176 | None:intergenic |
CAACCTTGCTAACCTAACCA+TGG | 0.651567 | 8_2:-62410087 | None:intergenic |
CTCACCCTGCAATGTCAGGG+TGG | 0.653884 | 8_2:-62413718 | None:intergenic |
AAGGTGCTCCGGCGAGAATG+TGG | 0.657081 | 8_2:-62410238 | None:intergenic |
ATGAATATTATAGCCGATGG+AGG | 0.657327 | 8_2:-62410184 | None:intergenic |
AATCAAATGAGAGCAGCGGT+GGG | 0.666667 | 8_2:+62411124 | Msa1260410:CDS |
TCAAGGTTGTAACAGTGATG+AGG | 0.671497 | 8_2:+62412240 | Msa1260410:CDS |
CTCAAGCTGAAAGTGGAACG+TGG | 0.673837 | 8_2:+62411795 | Msa1260410:CDS |
GGTGGGTGGTTTGCGCAATG+TGG | 0.680016 | 8_2:+62411141 | Msa1260410:CDS |
AGTTTAAACATCATTGTACA+CGG | 0.681628 | 8_2:+62413744 | Msa1260410:three_prime_UTR |
CATCCTTGAGAGATGAGGTG+CGG | 0.682250 | 8_2:+62411748 | Msa1260410:CDS |
GAAGTGTGAGAGAAAATGGA+AGG | 0.684028 | 8_2:-62410257 | None:intergenic |
ATTGAATCAAATGAGAGCAG+CGG | 0.686905 | 8_2:+62411120 | Msa1260410:CDS |
GCAGCCGGTGAAATATATGG+TGG | 0.693718 | 8_2:+62412550 | Msa1260410:CDS |
GAAGAGGTAGAATGAAACTG+TGG | 0.693779 | 8_2:+62410666 | Msa1260410:CDS |
ATGTCGGACCAACTAACGGG+TGG | 0.696538 | 8_2:-62411834 | None:intergenic |
TAGCTGAACTGTACCTGCGG+TGG | 0.699212 | 8_2:-62412862 | None:intergenic |
TTATTTCTATTCCAACCCAG+AGG | 0.699845 | 8_2:+62413349 | Msa1260410:CDS |
GGTGTCGTTTCGTTGAACAA+CGG | 0.700816 | 8_2:+62410477 | Msa1260410:five_prime_UTR |
AATCAAGCAAAAGCAGCCGG+GGG | 0.715141 | 8_2:+62413594 | Msa1260410:three_prime_UTR |
AACTGTGCAGATATGTGACA+TGG | 0.717484 | 8_2:+62411490 | Msa1260410:intron |
TCCACATGTGTAAAACACGA+AGG | 0.718734 | 8_2:-62410785 | None:intergenic |
TTTATGTCCTCTAACACCCG+AGG | 0.720237 | 8_2:+62412471 | Msa1260410:CDS |
GATGATACGTGCAACTACAA+CGG | 0.721489 | 8_2:+62410688 | Msa1260410:CDS |
ACAGCTATAGGTGATTTGTG+GGG | 0.725015 | 8_2:+62410740 | Msa1260410:CDS |
TTAAACATCATTGTACACGG+AGG | 0.789433 | 8_2:+62413747 | Msa1260410:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAATTAAATCTACATTTA+GGG | + | chr8_2:62410514-62410533 | Msa1260410:five_prime_UTR | 10.0% |
!! | TTAATAATCATAATTAAACA+AGG | - | chr8_2:62411008-62411027 | None:intergenic | 10.0% |
!! | TGATTGAAAAAATAAATAAT+TGG | - | chr8_2:62412326-62412345 | None:intergenic | 10.0% |
!! | CTTTAATTAAATCTACATTT+AGG | + | chr8_2:62410513-62410532 | Msa1260410:five_prime_UTR | 15.0% |
!! | ACTTAATTAGAAAGTAAAAA+AGG | - | chr8_2:62410892-62410911 | None:intergenic | 15.0% |
!! | AAATAGCAATAAAACAAATT+AGG | - | chr8_2:62410927-62410946 | None:intergenic | 15.0% |
!!! | ATAGTTCTTTTATAAGATAT+TGG | - | chr8_2:62412978-62412997 | None:intergenic | 15.0% |
!! | TTCATATTCATATACAAATT+TGG | + | chr8_2:62413772-62413791 | Msa1260410:three_prime_UTR | 15.0% |
!!! | GTTATTTTTTATATTGAGGA+GGG | - | chr8_2:62410313-62410332 | None:intergenic | 20.0% |
!!! | CATTTGTTTTTAATTAGCAA+AGG | - | chr8_2:62411957-62411976 | None:intergenic | 20.0% |
!! | CTTTGCTAATTAAAAACAAA+TGG | + | chr8_2:62411955-62411974 | Msa1260410:intron | 20.0% |
!!! | AATAATTGGACTTTTGAAAT+AGG | - | chr8_2:62412312-62412331 | None:intergenic | 20.0% |
!!! | ATTTATTTTTTCAATCACTG+TGG | + | chr8_2:62412329-62412348 | Msa1260410:intron | 20.0% |
!!! | AAATTTCAATTTTTTGTGCT+TGG | + | chr8_2:62412385-62412404 | Msa1260410:intron | 20.0% |
!!! | CTATAAAGTTTACCAATTTT+GGG | - | chr8_2:62412609-62412628 | None:intergenic | 20.0% |
!! | AAACTTTATAGCTAAACTAA+AGG | + | chr8_2:62412618-62412637 | Msa1260410:intron | 20.0% |
!!! | AATTTGGAATTTTGTTTATC+TGG | - | chr8_2:62412938-62412957 | None:intergenic | 20.0% |
!!! | GTTATAGTGTTATTATTAGT+TGG | + | chr8_2:62413096-62413115 | Msa1260410:intron | 20.0% |
!! | TTAATAGATCAGTACAATAA+CGG | + | chr8_2:62413218-62413237 | Msa1260410:CDS | 20.0% |
!! | AAATGTGTTTGGAAAAATAA+TGG | + | chr8_2:62413414-62413433 | Msa1260410:three_prime_UTR | 20.0% |
!! | AGAAAAAAAAATAATACCAG+TGG | - | chr8_2:62413830-62413849 | None:intergenic | 20.0% |
! | TTAAACTATAGAACGAGTTA+AGG | + | chr8_2:62410031-62410050 | Msa1260410:five_prime_UTR | 25.0% |
! | TAAACTATAGAACGAGTTAA+GGG | + | chr8_2:62410032-62410051 | Msa1260410:five_prime_UTR | 25.0% |
!!! | GGTTATTTTTTATATTGAGG+AGG | - | chr8_2:62410314-62410333 | None:intergenic | 25.0% |
!!! | CGGTTAATTTTTATTTGTTG+CGG | + | chr8_2:62410337-62410356 | Msa1260410:five_prime_UTR | 25.0% |
! | ATAGTTCAATTAACAGCTAT+AGG | + | chr8_2:62410728-62410747 | Msa1260410:CDS | 25.0% |
!!! | TAAAAAAGGTACTAACTCTT+GGG | - | chr8_2:62410878-62410897 | None:intergenic | 25.0% |
! | TCAGGAGTTTATAAAAACAA+TGG | + | chr8_2:62411070-62411089 | Msa1260410:intron | 25.0% |
! | CAGGAGTTTATAAAAACAAT+GGG | + | chr8_2:62411071-62411090 | Msa1260410:intron | 25.0% |
! | TAAATAATCAGAAACGCAAA+CGG | - | chr8_2:62411466-62411485 | None:intergenic | 25.0% |
!! | AACTTGATAAAACATCCTTT+TGG | + | chr8_2:62411555-62411574 | Msa1260410:CDS | 25.0% |
!! | ACTTGATAAAACATCCTTTT+GGG | + | chr8_2:62411556-62411575 | Msa1260410:CDS | 25.0% |
! | AAATAGTCAATGAGATAAGA+GGG | - | chr8_2:62411672-62411691 | None:intergenic | 25.0% |
! | TAAATAGTCAATGAGATAAG+AGG | - | chr8_2:62411673-62411692 | None:intergenic | 25.0% |
! | GTTCTTATAGTAAGATATGT+CGG | - | chr8_2:62411853-62411872 | None:intergenic | 25.0% |
! | CAAAAAATTGAAATTTGAGG+AGG | - | chr8_2:62412381-62412400 | None:intergenic | 25.0% |
! | GCACAAAAAATTGAAATTTG+AGG | - | chr8_2:62412384-62412403 | None:intergenic | 25.0% |
!! | GCTATAAAGTTTACCAATTT+TGG | - | chr8_2:62412610-62412629 | None:intergenic | 25.0% |
!!! | AATGATTTTGAAAGAAACGA+AGG | - | chr8_2:62412748-62412767 | None:intergenic | 25.0% |
! | ACTTCGATAAAACTCAAATT+TGG | - | chr8_2:62412954-62412973 | None:intergenic | 25.0% |
!! | TGAAAAGTTTTTCCTTATAC+CGG | + | chr8_2:62413012-62413031 | Msa1260410:intron | 25.0% |
! | ATATAAATAGTTCCGGTATA+AGG | - | chr8_2:62413027-62413046 | None:intergenic | 25.0% |
! | GATGTGAATATAAATAGTTC+CGG | - | chr8_2:62413034-62413053 | None:intergenic | 25.0% |
! | ATTGCTTATACAGATATCTT+GGG | + | chr8_2:62413153-62413172 | Msa1260410:intron | 25.0% |
! | TAGAAATAATCCTCTTCTTT+GGG | - | chr8_2:62413338-62413357 | None:intergenic | 25.0% |
! | ATAGAAATAATCCTCTTCTT+TGG | - | chr8_2:62413339-62413358 | None:intergenic | 25.0% |
!!! | CTTTTTTGTATCAAGAAAAG+AGG | + | chr8_2:62413525-62413544 | Msa1260410:three_prime_UTR | 25.0% |
!! | TAAAAATATAAAGTATCCCC+CGG | - | chr8_2:62413613-62413632 | None:intergenic | 25.0% |
! | AGTTTAAACATCATTGTACA+CGG | + | chr8_2:62413744-62413763 | Msa1260410:three_prime_UTR | 25.0% |
! | CATATACAAATTTGGATTAC+TGG | + | chr8_2:62413780-62413799 | Msa1260410:three_prime_UTR | 25.0% |
AAACTATAGAACGAGTTAAG+GGG | + | chr8_2:62410033-62410052 | Msa1260410:five_prime_UTR | 30.0% | |
!! | TAACTTCACTCTTTGGAATT+TGG | - | chr8_2:62410066-62410085 | None:intergenic | 30.0% |
TGAATGAATATTATAGCCGA+TGG | - | chr8_2:62410190-62410209 | None:intergenic | 30.0% | |
TGTTGAATTTGAGGAAATGA+AGG | - | chr8_2:62410284-62410303 | None:intergenic | 30.0% | |
!!! | CGCGGTTATTTTTTATATTG+AGG | - | chr8_2:62410317-62410336 | None:intergenic | 30.0% |
CAATATAAAAAATAACCGCG+CGG | + | chr8_2:62410317-62410336 | Msa1260410:five_prime_UTR | 30.0% | |
ACAAATAAAAATTAACCGCG+CGG | - | chr8_2:62410335-62410354 | None:intergenic | 30.0% | |
!! | ATTAGTTGATAACTTCGATC+CGG | + | chr8_2:62410456-62410475 | Msa1260410:five_prime_UTR | 30.0% |
!! | TAGTTATTGCTTTTACTCTC+TGG | - | chr8_2:62410563-62410582 | None:intergenic | 30.0% |
GTAAAAGCAATAACTACAAG+TGG | + | chr8_2:62410567-62410586 | Msa1260410:CDS | 30.0% | |
!! | GTAAAAAAGGTACTAACTCT+TGG | - | chr8_2:62410879-62410898 | None:intergenic | 30.0% |
TAAAAACAATGGGTACTTGA+TGG | + | chr8_2:62411081-62411100 | Msa1260410:CDS | 30.0% | |
!! | TGATTTTAGTCCTGAAATGT+AGG | + | chr8_2:62411184-62411203 | Msa1260410:intron | 30.0% |
!! | GATTTTAGTCCTGAAATGTA+GGG | + | chr8_2:62411185-62411204 | Msa1260410:intron | 30.0% |
!! | ATTTTAGTCCTGAAATGTAG+GGG | + | chr8_2:62411186-62411205 | Msa1260410:intron | 30.0% |
TTATATAACCCCTACATTTC+AGG | - | chr8_2:62411197-62411216 | None:intergenic | 30.0% | |
ATTTAGTCCTCAAGATTGTA+GGG | - | chr8_2:62411365-62411384 | None:intergenic | 30.0% | |
TATTTAGTCCTCAAGATTGT+AGG | - | chr8_2:62411366-62411385 | None:intergenic | 30.0% | |
GACATTTAAATATCTGGCAA+TGG | - | chr8_2:62411519-62411538 | None:intergenic | 30.0% | |
AAGCGTGACATTTAAATATC+TGG | - | chr8_2:62411525-62411544 | None:intergenic | 30.0% | |
! | AAGGATGTTTTATCAAGTTC+AGG | - | chr8_2:62411554-62411573 | None:intergenic | 30.0% |
CATTTGTCGATAAAACAAAC+AGG | - | chr8_2:62411611-62411630 | None:intergenic | 30.0% | |
AAATATGTCTTGGAATTCAC+TGG | - | chr8_2:62411709-62411728 | None:intergenic | 30.0% | |
ATTCCAAGACATATTTGATG+TGG | + | chr8_2:62411713-62411732 | Msa1260410:CDS | 30.0% | |
CATATCTTACTATAAGAACC+AGG | + | chr8_2:62411854-62411873 | Msa1260410:CDS | 30.0% | |
! | ACTTTGTGCTTTTGTATCAA+GGG | - | chr8_2:62412004-62412023 | None:intergenic | 30.0% |
! | AACTTTGTGCTTTTGTATCA+AGG | - | chr8_2:62412005-62412024 | None:intergenic | 30.0% |
AGTTGTCCATCTAAATAGAA+CGG | + | chr8_2:62412021-62412040 | Msa1260410:CDS | 30.0% | |
! | ATCAAGCTTCTAAGGAAAAA+CGG | + | chr8_2:62412157-62412176 | Msa1260410:CDS | 30.0% |
! | ATTATTTTCTCTTTCCACCA+AGG | - | chr8_2:62412424-62412443 | None:intergenic | 30.0% |
!! | ATTTTGAAAGAAACGAAGGT+CGG | - | chr8_2:62412744-62412763 | None:intergenic | 30.0% |
TCAAAATCATTCATCTCAGA+TGG | + | chr8_2:62412757-62412776 | Msa1260410:CDS | 30.0% | |
! | ATTTTTGTTCCCACATATGA+TGG | + | chr8_2:62412815-62412834 | Msa1260410:CDS | 30.0% |
AGTTCAGCTAGTAAAATTTG+TGG | + | chr8_2:62412875-62412894 | Msa1260410:intron | 30.0% | |
TTGTTTATCTGGAGGTTTAA+TGG | - | chr8_2:62412927-62412946 | None:intergenic | 30.0% | |
!! | TTGGAATTTTGTTTATCTGG+AGG | - | chr8_2:62412935-62412954 | None:intergenic | 30.0% |
ATATCTGTATAAGCAATGGA+AGG | - | chr8_2:62413150-62413169 | None:intergenic | 30.0% | |
CAAGATATCTGTATAAGCAA+TGG | - | chr8_2:62413154-62413173 | None:intergenic | 30.0% | |
CATTGCTTATACAGATATCT+TGG | + | chr8_2:62413152-62413171 | Msa1260410:intron | 30.0% | |
! | GAATTACCAACCTTTTACTA+GGG | - | chr8_2:62413307-62413326 | None:intergenic | 30.0% |
GAGCTAATTCAATAAATCTG+TGG | - | chr8_2:62413480-62413499 | None:intergenic | 30.0% | |
!! | TTCAGTTTTAACAAACACGA+CGG | + | chr8_2:62413502-62413521 | Msa1260410:three_prime_UTR | 30.0% |
! | CTTGATTAGAATTTTTGCGA+AGG | - | chr8_2:62413581-62413600 | None:intergenic | 30.0% |
TGAAAGAAAAACGAATGTGA+TGG | - | chr8_2:62413662-62413681 | None:intergenic | 30.0% | |
ATGAATATTATAGCCGATGG+AGG | - | chr8_2:62410187-62410206 | None:intergenic | 35.0% | |
GGGAAATGTTGTTGAATTTG+AGG | - | chr8_2:62410293-62410312 | None:intergenic | 35.0% | |
ACTGTATTTCTTGTCTGCAT+TGG | + | chr8_2:62410407-62410426 | Msa1260410:five_prime_UTR | 35.0% | |
TAACTACAAGTGGCAAGATT+TGG | + | chr8_2:62410577-62410596 | Msa1260410:CDS | 35.0% | |
AACTACAAGTGGCAAGATTT+GGG | + | chr8_2:62410578-62410597 | Msa1260410:CDS | 35.0% | |
!! | ACAAAAAGAGAGACTAGCTT+CGG | + | chr8_2:62410619-62410638 | Msa1260410:CDS | 35.0% |
TAACAGCTATAGGTGATTTG+TGG | + | chr8_2:62410738-62410757 | Msa1260410:CDS | 35.0% | |
! | AACAGCTATAGGTGATTTGT+GGG | + | chr8_2:62410739-62410758 | Msa1260410:CDS | 35.0% |
TGTTACGTTGTTGTGATATC+AGG | + | chr8_2:62411052-62411071 | Msa1260410:intron | 35.0% | |
ATTGAATCAAATGAGAGCAG+CGG | + | chr8_2:62411120-62411139 | Msa1260410:CDS | 35.0% | |
TAGTTGCACAATGACACAAA+CGG | - | chr8_2:62411425-62411444 | None:intergenic | 35.0% | |
GATCCACATCAAATATGTCT+TGG | - | chr8_2:62411719-62411738 | None:intergenic | 35.0% | |
GTGGATACTAAAAACTAACC+TGG | - | chr8_2:62411875-62411894 | None:intergenic | 35.0% | |
TGTGAAAGATACGATCACAT+TGG | - | chr8_2:62411901-62411920 | None:intergenic | 35.0% | |
ATCTAAATAGAACGGATGCT+CGG | + | chr8_2:62412029-62412048 | Msa1260410:CDS | 35.0% | |
! | ATGGACATGTTAGCATTTTC+TGG | + | chr8_2:62412211-62412230 | Msa1260410:CDS | 35.0% |
!!! | ACCATCTCTTCTTTTCAAGT+CGG | - | chr8_2:62412452-62412471 | None:intergenic | 35.0% |
ATTCAAATCTACATTGCAGC+CGG | + | chr8_2:62412535-62412554 | Msa1260410:CDS | 35.0% | |
TTCTCCACCATATATTTCAC+CGG | - | chr8_2:62412557-62412576 | None:intergenic | 35.0% | |
! | TATATGGTGGAGAAAGAAGA+CGG | + | chr8_2:62412563-62412582 | Msa1260410:CDS | 35.0% |
!! | TTCAAAGGAGTACCCAAAAT+TGG | + | chr8_2:62412594-62412613 | Msa1260410:CDS | 35.0% |
AAGTGGAAAGGAAAACAGTA+AGG | - | chr8_2:62412679-62412698 | None:intergenic | 35.0% | |
GTTTCAACAACAAAGTGGAA+AGG | - | chr8_2:62412691-62412710 | None:intergenic | 35.0% | |
!! | TTCCACTTTGTTGTTGAAAC+AGG | + | chr8_2:62412691-62412710 | Msa1260410:intron | 35.0% |
! | TCCCACATATGATGGAAATA+TGG | + | chr8_2:62412823-62412842 | Msa1260410:CDS | 35.0% |
GCCATATTTCCATCATATGT+GGG | - | chr8_2:62412827-62412846 | None:intergenic | 35.0% | |
AAATATGGCCAAAGTAGTTG+CGG | + | chr8_2:62412838-62412857 | Msa1260410:CDS | 35.0% | |
! | GTTCAAGAAGACGATTTTAC+TGG | + | chr8_2:62413175-62413194 | Msa1260410:CDS | 35.0% |
! | GGAATTACCAACCTTTTACT+AGG | - | chr8_2:62413308-62413327 | None:intergenic | 35.0% |
!! | TTATTTCTATTCCAACCCAG+AGG | + | chr8_2:62413349-62413368 | Msa1260410:CDS | 35.0% |
!! | ATGGTTCTAAACATTCCTCT+GGG | - | chr8_2:62413367-62413386 | None:intergenic | 35.0% |
CTACTCAGCATATCATTTGA+TGG | - | chr8_2:62413386-62413405 | None:intergenic | 35.0% | |
! | ATTTTACATGTACCATCTCC+TGG | + | chr8_2:62413438-62413457 | Msa1260410:three_prime_UTR | 35.0% |
GCTACTATACAAGAATGTGA+TGG | - | chr8_2:62413699-62413718 | None:intergenic | 35.0% | |
TTAAACATCATTGTACACGG+AGG | + | chr8_2:62413747-62413766 | Msa1260410:three_prime_UTR | 35.0% | |
CCATGGTTAACTTCACTCTT+TGG | - | chr8_2:62410073-62410092 | None:intergenic | 40.0% | |
CCAAAGAGTGAAGTTAACCA+TGG | + | chr8_2:62410070-62410089 | Msa1260410:five_prime_UTR | 40.0% | |
GAGTGAAGTTAACCATGGTT+AGG | + | chr8_2:62410075-62410094 | Msa1260410:five_prime_UTR | 40.0% | |
TAACCATGGTTAGGTTAGCA+AGG | + | chr8_2:62410084-62410103 | Msa1260410:five_prime_UTR | 40.0% | |
GTTAGCAAGGTTGTAGGTAT+AGG | + | chr8_2:62410097-62410116 | Msa1260410:five_prime_UTR | 40.0% | |
AAGGTTGTAGGTATAGGTGT+AGG | + | chr8_2:62410103-62410122 | Msa1260410:five_prime_UTR | 40.0% | |
AATATTATAGCCGATGGAGG+TGG | - | chr8_2:62410184-62410203 | None:intergenic | 40.0% | |
GAAGTGTGAGAGAAAATGGA+AGG | - | chr8_2:62410260-62410279 | None:intergenic | 40.0% | |
AGGTGAAGTGTGAGAGAAAA+TGG | - | chr8_2:62410264-62410283 | None:intergenic | 40.0% | |
!! | CAAAAAGAGAGACTAGCTTC+GGG | + | chr8_2:62410620-62410639 | Msa1260410:CDS | 40.0% |
GAAGAGGTAGAATGAAACTG+TGG | + | chr8_2:62410666-62410685 | Msa1260410:CDS | 40.0% | |
GATGATACGTGCAACTACAA+CGG | + | chr8_2:62410688-62410707 | Msa1260410:CDS | 40.0% | |
CAACTACAACGGTGATATTG+TGG | + | chr8_2:62410699-62410718 | Msa1260410:CDS | 40.0% | |
! | ACAGCTATAGGTGATTTGTG+GGG | + | chr8_2:62410740-62410759 | Msa1260410:CDS | 40.0% |
TCCACATGTGTAAAACACGA+AGG | - | chr8_2:62410788-62410807 | None:intergenic | 40.0% | |
!! | TGCTTCAAATTCTAGAGCGT+TGG | + | chr8_2:62410814-62410833 | Msa1260410:CDS | 40.0% |
!! | AAAAGGTACTAACTCTTGGG+AGG | - | chr8_2:62410875-62410894 | None:intergenic | 40.0% |
! | TACTTGATGGTTTCGTGCAA+TGG | + | chr8_2:62411094-62411113 | Msa1260410:CDS | 40.0% |
AAAATCCTCCTTGATCCTGT+TGG | + | chr8_2:62411232-62411251 | Msa1260410:intron | 40.0% | |
!! | TCTCAATGGACTAACTTGAC+CGG | - | chr8_2:62411262-62411281 | None:intergenic | 40.0% |
!! | CCACTTTGAGATGATCTCAA+TGG | - | chr8_2:62411276-62411295 | None:intergenic | 40.0% |
CCATTGAGATCATCTCAAAG+TGG | + | chr8_2:62411273-62411292 | Msa1260410:intron | 40.0% | |
AGTTGCACAATGACACAAAC+GGG | - | chr8_2:62411424-62411443 | None:intergenic | 40.0% | |
AACTGTGCAGATATGTGACA+TGG | + | chr8_2:62411490-62411509 | Msa1260410:intron | 40.0% | |
!! | CAACTCAAACGGCATTGATA+AGG | - | chr8_2:62411638-62411657 | None:intergenic | 40.0% |
!! | ATCAATGCCGTTTGAGTTGA+AGG | + | chr8_2:62411639-62411658 | Msa1260410:intron | 40.0% |
CAGAACACCTTCAACTCAAA+CGG | - | chr8_2:62411649-62411668 | None:intergenic | 40.0% | |
TATCACATCCTTGAGAGATG+AGG | + | chr8_2:62411743-62411762 | Msa1260410:CDS | 40.0% | |
AGATATGTCGGACCAACTAA+CGG | - | chr8_2:62411841-62411860 | None:intergenic | 40.0% | |
GAGCATCCGTTCTATTTAGA+TGG | - | chr8_2:62412030-62412049 | None:intergenic | 40.0% | |
! | CTGCGATGCAGAGTTAATTT+TGG | + | chr8_2:62412088-62412107 | Msa1260410:CDS | 40.0% |
GAGATTCACTTCTCAGATAG+AGG | + | chr8_2:62412117-62412136 | Msa1260410:CDS | 40.0% | |
ACTTCTCAGATAGAGGAGTT+GGG | + | chr8_2:62412124-62412143 | Msa1260410:CDS | 40.0% | |
GAAAGGTGATCAAGCTTCTA+AGG | + | chr8_2:62412149-62412168 | Msa1260410:CDS | 40.0% | |
AAGGAAAAACGGTCCATTTC+TGG | + | chr8_2:62412168-62412187 | Msa1260410:CDS | 40.0% | |
CTAAGATGAAGGACCAGAAA+TGG | - | chr8_2:62412184-62412203 | None:intergenic | 40.0% | |
!! | CATTTCTGGTCCTTCATCTT+AGG | + | chr8_2:62412182-62412201 | Msa1260410:CDS | 40.0% |
CCATCTCATACCTAAGATGA+AGG | - | chr8_2:62412195-62412214 | None:intergenic | 40.0% | |
CCTTCATCTTAGGTATGAGA+TGG | + | chr8_2:62412192-62412211 | Msa1260410:CDS | 40.0% | |
TCAAGGTTGTAACAGTGATG+AGG | + | chr8_2:62412240-62412259 | Msa1260410:CDS | 40.0% | |
TGGAAGAGTTGACAAGAATG+AGG | + | chr8_2:62412263-62412282 | Msa1260410:CDS | 40.0% | |
TTTCTCTTTCCACCAAGGAT+AGG | - | chr8_2:62412419-62412438 | None:intergenic | 40.0% | |
! | TCCGACTTGAAAAGAAGAGA+TGG | + | chr8_2:62412448-62412467 | Msa1260410:CDS | 40.0% |
ATTGCAGCCGGTGAAATATA+TGG | + | chr8_2:62412547-62412566 | Msa1260410:CDS | 40.0% | |
AAGACGGACAAGTCTTTCAA+AGG | + | chr8_2:62412579-62412598 | Msa1260410:CDS | 40.0% | |
TAGCTAAACTAAAGGCAGCA+TGG | + | chr8_2:62412626-62412645 | Msa1260410:intron | 40.0% | |
GACCTGTTTCAACAACAAAG+TGG | - | chr8_2:62412696-62412715 | None:intergenic | 40.0% | |
!! | CTTTGTTGTTGAAACAGGTC+AGG | + | chr8_2:62412696-62412715 | Msa1260410:intron | 40.0% |
GGCCATATTTCCATCATATG+TGG | - | chr8_2:62412828-62412847 | None:intergenic | 40.0% | |
AATATGGCCAAAGTAGTTGC+GGG | + | chr8_2:62412839-62412858 | Msa1260410:CDS | 40.0% | |
TGGAAGGTTGTCAATTCACT+TGG | - | chr8_2:62413134-62413153 | None:intergenic | 40.0% | |
CCTTCACAGCTGAAGAAAAT+TGG | - | chr8_2:62413259-62413278 | None:intergenic | 40.0% | |
! | CCAATTTTCTTCAGCTGTGA+AGG | + | chr8_2:62413256-62413275 | Msa1260410:CDS | 40.0% |
TTCTAAACATTCCTCTGGGT+TGG | - | chr8_2:62413363-62413382 | None:intergenic | 40.0% | |
!! | GATGGTTCTAAACATTCCTC+TGG | - | chr8_2:62413368-62413387 | None:intergenic | 40.0% |
TAGCACGTGACAAATGTGTT+TGG | + | chr8_2:62413403-62413422 | Msa1260410:exon | 40.0% | |
AAGAGGCAGACATAGAGAAA+AGG | + | chr8_2:62413542-62413561 | Msa1260410:three_prime_UTR | 40.0% | |
ACATAGAGAAAAGGTGGAGT+GGG | + | chr8_2:62413551-62413570 | Msa1260410:three_prime_UTR | 40.0% | |
TCTAATCAAGCAAAAGCAGC+CGG | + | chr8_2:62413591-62413610 | Msa1260410:three_prime_UTR | 40.0% | |
ATTACTGGATCTGCAGTTTG+TGG | + | chr8_2:62413795-62413814 | Msa1260410:three_prime_UTR | 40.0% | |
TTTGTGGAAGCTTAAACCAC+TGG | + | chr8_2:62413811-62413830 | Msa1260410:three_prime_UTR | 40.0% | |
CAACCTTGCTAACCTAACCA+TGG | - | chr8_2:62410090-62410109 | None:intergenic | 45.0% | |
GGTTAGGTTAGCAAGGTTGT+AGG | + | chr8_2:62410091-62410110 | Msa1260410:five_prime_UTR | 45.0% | |
!! | AGAGAAAATGGAAGGTGCTC+CGG | - | chr8_2:62410252-62410271 | None:intergenic | 45.0% |
GTTGTTCAACGAAACGACAC+CGG | - | chr8_2:62410478-62410497 | None:intergenic | 45.0% | |
!! | GGTGTCGTTTCGTTGAACAA+CGG | + | chr8_2:62410477-62410496 | Msa1260410:five_prime_UTR | 45.0% |
ACAAGTGGCAAGATTTGGGT+TGG | + | chr8_2:62410582-62410601 | Msa1260410:CDS | 45.0% | |
!! | TGGCAAGATTTGGGTTGGAT+GGG | + | chr8_2:62410587-62410606 | Msa1260410:CDS | 45.0% |
!! | TTTGGGTTGGATGGGTTTGA+AGG | + | chr8_2:62410595-62410614 | Msa1260410:CDS | 45.0% |
! | GCCTTCGTGTTTTACACATG+TGG | + | chr8_2:62410784-62410803 | Msa1260410:CDS | 45.0% |
TAACTCTTGGGAGGAAGAAC+TGG | - | chr8_2:62410866-62410885 | None:intergenic | 45.0% | |
! | TTGATGGTTTCGTGCAATGG+AGG | + | chr8_2:62411097-62411116 | Msa1260410:CDS | 45.0% |
AATCAAATGAGAGCAGCGGT+GGG | + | chr8_2:62411124-62411143 | Msa1260410:CDS | 45.0% | |
GGGTCAGACAATTCAGTATC+TGG | - | chr8_2:62411345-62411364 | None:intergenic | 45.0% | |
TGTCTGACCCTACAATCTTG+AGG | + | chr8_2:62411355-62411374 | Msa1260410:intron | 45.0% | |
GTTGCACAATGACACAAACG+GGG | - | chr8_2:62411423-62411442 | None:intergenic | 45.0% | |
AACGCAAACGGAAACAGTAC+AGG | - | chr8_2:62411454-62411473 | None:intergenic | 45.0% | |
ATTGAGTGAGAGACTCACCT+AGG | - | chr8_2:62411587-62411606 | None:intergenic | 45.0% | |
ACTTTCAGCTTGAGTCTAGG+AGG | - | chr8_2:62411789-62411808 | None:intergenic | 45.0% | |
TCCTAGACTCAAGCTGAAAG+TGG | + | chr8_2:62411788-62411807 | Msa1260410:CDS | 45.0% | |
TCCACTTTCAGCTTGAGTCT+AGG | - | chr8_2:62411792-62411811 | None:intergenic | 45.0% | |
! | TAACGGGTGGCATAGTGTAA+AGG | - | chr8_2:62411824-62411843 | None:intergenic | 45.0% |
GATATGTCGGACCAACTAAC+GGG | - | chr8_2:62411840-62411859 | None:intergenic | 45.0% | |
!! | GATACGATCACATTGGCTTG+TGG | - | chr8_2:62411894-62411913 | None:intergenic | 45.0% |
CACTTCTCAGATAGAGGAGT+TGG | + | chr8_2:62412123-62412142 | Msa1260410:CDS | 45.0% | |
!!! | GCATTTTCTGGCTGTACTCA+AGG | + | chr8_2:62412223-62412242 | Msa1260410:CDS | 45.0% |
AGGTTGTAACAGTGATGAGG+TGG | + | chr8_2:62412243-62412262 | Msa1260410:CDS | 45.0% | |
TTGGCAGATATGCCTATCCT+TGG | + | chr8_2:62412404-62412423 | Msa1260410:intron | 45.0% | |
TTTATGTCCTCTAACACCCG+AGG | + | chr8_2:62412471-62412490 | Msa1260410:CDS | 45.0% | |
GTCAAGAGCCCTTAGTGTAA+GGG | - | chr8_2:62412503-62412522 | None:intergenic | 45.0% | |
TGTCAAGAGCCCTTAGTGTA+AGG | - | chr8_2:62412504-62412523 | None:intergenic | 45.0% | |
GTTGTTGAAACAGGTCAGGA+AGG | + | chr8_2:62412700-62412719 | Msa1260410:intron | 45.0% | |
TGAAAGAAACGAAGGTCGGA+TGG | - | chr8_2:62412740-62412759 | None:intergenic | 45.0% | |
TTCATCTCAGATGGCAGCAT+TGG | + | chr8_2:62412766-62412785 | Msa1260410:CDS | 45.0% | |
TACTAGCTGAACTGTACCTG+CGG | - | chr8_2:62412868-62412887 | None:intergenic | 45.0% | |
ACAATAACGGTGCACTGAAC+TGG | + | chr8_2:62413231-62413250 | Msa1260410:CDS | 45.0% | |
CAATAACGGTGCACTGAACT+GGG | + | chr8_2:62413232-62413251 | Msa1260410:CDS | 45.0% | |
GAATCACATGCTCATCGCAT+GGG | + | chr8_2:62413278-62413297 | Msa1260410:CDS | 45.0% | |
GCATGGGTAACCCTAGTAAA+AGG | + | chr8_2:62413294-62413313 | Msa1260410:CDS | 45.0% | |
GGGTAACCCTAGTAAAAGGT+TGG | + | chr8_2:62413298-62413317 | Msa1260410:CDS | 45.0% | |
AAACCAAGTGTACCAGGAGA+TGG | - | chr8_2:62413453-62413472 | None:intergenic | 45.0% | |
GGTAGAAAACCAAGTGTACC+AGG | - | chr8_2:62413459-62413478 | None:intergenic | 45.0% | |
AGGCAGACATAGAGAAAAGG+TGG | + | chr8_2:62413545-62413564 | Msa1260410:three_prime_UTR | 45.0% | |
GACATAGAGAAAAGGTGGAG+TGG | + | chr8_2:62413550-62413569 | Msa1260410:three_prime_UTR | 45.0% | |
CTAATCAAGCAAAAGCAGCC+GGG | + | chr8_2:62413592-62413611 | Msa1260410:three_prime_UTR | 45.0% | |
TAATCAAGCAAAAGCAGCCG+GGG | + | chr8_2:62413593-62413612 | Msa1260410:three_prime_UTR | 45.0% | |
TCTTTCCTCACCACCTCCAT+CGG | + | chr8_2:62410171-62410190 | Msa1260410:five_prime_UTR | 50.0% | |
CTTCTTCCTTCTTCGCTCTC+CGG | + | chr8_2:62410212-62410231 | Msa1260410:five_prime_UTR | 50.0% | |
!! | GTGGCAAGATTTGGGTTGGA+TGG | + | chr8_2:62410586-62410605 | Msa1260410:CDS | 50.0% |
!! | AGAGAGACTAGCTTCGGGTT+CGG | + | chr8_2:62410625-62410644 | Msa1260410:CDS | 50.0% |
! | TTCGGGTTCGGGTTTAGGTT+CGG | + | chr8_2:62410637-62410656 | Msa1260410:CDS | 50.0% |
! | TTAGGTTCGGGTTCAGGAAG+AGG | + | chr8_2:62410650-62410669 | Msa1260410:CDS | 50.0% |
TGGGGTCCTCGAGTTCTTAA+GGG | + | chr8_2:62410758-62410777 | Msa1260410:CDS | 50.0% | |
GTCCTCGAGTTCTTAAGGGT+TGG | + | chr8_2:62410762-62410781 | Msa1260410:CDS | 50.0% | |
GAATCAAATGAGAGCAGCGG+TGG | + | chr8_2:62411123-62411142 | Msa1260410:CDS | 50.0% | |
TCCTCCTTGATCCTGTTGGT+AGG | + | chr8_2:62411236-62411255 | Msa1260410:intron | 50.0% | |
! | CATCCTTTTGGGCTGATCCT+AGG | + | chr8_2:62411567-62411586 | Msa1260410:CDS | 50.0% |
TCACCTAGGATCAGCCCAAA+AGG | - | chr8_2:62411573-62411592 | None:intergenic | 50.0% | |
CATCCTTGAGAGATGAGGTG+CGG | + | chr8_2:62411748-62411767 | Msa1260410:CDS | 50.0% | |
TATCCGCACCTCATCTCTCA+AGG | - | chr8_2:62411754-62411773 | None:intergenic | 50.0% | |
CTCAAGCTGAAAGTGGAACG+TGG | + | chr8_2:62411795-62411814 | Msa1260410:CDS | 50.0% | |
ACACTATGCCACCCGTTAGT+TGG | + | chr8_2:62411826-62411845 | Msa1260410:CDS | 50.0% | |
AAATAGAACGGATGCTCGGC+TGG | + | chr8_2:62412033-62412052 | Msa1260410:CDS | 50.0% | |
! | GCTTCTGAATCTCTGGAGGT+TGG | - | chr8_2:62412069-62412088 | None:intergenic | 50.0% |
CATCGCAGCTTCTGAATCTC+TGG | - | chr8_2:62412076-62412095 | None:intergenic | 50.0% | |
GATAGAGGAGTTGGGCAGAA+AGG | + | chr8_2:62412132-62412151 | Msa1260410:CDS | 50.0% | |
GCAGATATGCCTATCCTTGG+TGG | + | chr8_2:62412407-62412426 | Msa1260410:intron | 50.0% | |
TAGTGTAAGGGCAGTCTCCT+CGG | - | chr8_2:62412491-62412510 | None:intergenic | 50.0% | |
AGGAGACTGCCCTTACACTA+AGG | + | chr8_2:62412491-62412510 | Msa1260410:CDS | 50.0% | |
GGAGACTGCCCTTACACTAA+GGG | + | chr8_2:62412492-62412511 | Msa1260410:CDS | 50.0% | |
GCAGCCGGTGAAATATATGG+TGG | + | chr8_2:62412550-62412569 | Msa1260410:CDS | 50.0% | |
GGTCAGGAAGGAAACACTGT+TGG | + | chr8_2:62412712-62412731 | Msa1260410:intron | 50.0% | |
GGAATCACATGCTCATCGCA+TGG | + | chr8_2:62413277-62413296 | Msa1260410:CDS | 50.0% | |
TCCTGACAAGCCCAAAGAAG+AGG | + | chr8_2:62413325-62413344 | Msa1260410:CDS | 50.0% | |
TCCTCTTCTTTGGGCTTGTC+AGG | - | chr8_2:62413329-62413348 | None:intergenic | 50.0% | |
GTACCATCTCCTGGTACACT+TGG | + | chr8_2:62413447-62413466 | Msa1260410:three_prime_UTR | 50.0% | |
AATCAAGCAAAAGCAGCCGG+GGG | + | chr8_2:62413594-62413613 | Msa1260410:three_prime_UTR | 50.0% | |
TATAGCCGATGGAGGTGGTG+AGG | - | chr8_2:62410179-62410198 | None:intergenic | 55.0% | |
!! | GAGAGACTAGCTTCGGGTTC+GGG | + | chr8_2:62410626-62410645 | Msa1260410:CDS | 55.0% |
! | CTAGCTTCGGGTTCGGGTTT+AGG | + | chr8_2:62410632-62410651 | Msa1260410:CDS | 55.0% |
! | TCGGGTTCGGGTTTAGGTTC+GGG | + | chr8_2:62410638-62410657 | Msa1260410:CDS | 55.0% |
! | TCGGGTTTAGGTTCGGGTTC+AGG | + | chr8_2:62410644-62410663 | Msa1260410:CDS | 55.0% |
GTGGGGTCCTCGAGTTCTTA+AGG | + | chr8_2:62410757-62410776 | Msa1260410:CDS | 55.0% | |
GGCCAACCCTTAAGAACTCG+AGG | - | chr8_2:62410767-62410786 | None:intergenic | 55.0% | |
CTCTTGGGAGGAAGAACTGG+TGG | - | chr8_2:62410863-62410882 | None:intergenic | 55.0% | |
GCCTACCAACAGGATCAAGG+AGG | - | chr8_2:62411240-62411259 | None:intergenic | 55.0% | |
! | CCTTGATCCTGTTGGTAGGC+CGG | + | chr8_2:62411240-62411259 | Msa1260410:intron | 55.0% |
AACTTGACCGGCCTACCAAC+AGG | - | chr8_2:62411250-62411269 | None:intergenic | 55.0% | |
ATGTCGGACCAACTAACGGG+TGG | - | chr8_2:62411837-62411856 | None:intergenic | 55.0% | |
! | GATGCTCGGCTGGCCAATAA+CGG | + | chr8_2:62412043-62412062 | Msa1260410:CDS | 55.0% |
! | CTCTGGAGGTTGGCCGTTAT+TGG | - | chr8_2:62412059-62412078 | None:intergenic | 55.0% |
CGCAGCTTCTGAATCTCTGG+AGG | - | chr8_2:62412073-62412092 | None:intergenic | 55.0% | |
AGTGTAAGGGCAGTCTCCTC+GGG | - | chr8_2:62412490-62412509 | None:intergenic | 55.0% | |
TAGCTGAACTGTACCTGCGG+TGG | - | chr8_2:62412865-62412884 | None:intergenic | 55.0% | |
AGTAGCCACCCTGACATTGC+AGG | + | chr8_2:62413713-62413732 | Msa1260410:three_prime_UTR | 55.0% | |
GTAGCCACCCTGACATTGCA+GGG | + | chr8_2:62413714-62413733 | Msa1260410:three_prime_UTR | 55.0% | |
GCACTCACCCTGCAATGTCA+GGG | - | chr8_2:62413724-62413743 | None:intergenic | 55.0% | |
TGCACTCACCCTGCAATGTC+AGG | - | chr8_2:62413725-62413744 | None:intergenic | 55.0% | |
! | AAGGTGCTCCGGCGAGAATG+TGG | - | chr8_2:62410241-62410260 | None:intergenic | 60.0% |
CAAATGAGAGCAGCGGTGGG+TGG | + | chr8_2:62411127-62411146 | Msa1260410:CDS | 60.0% | |
! | GGTGGGTGGTTTGCGCAATG+TGG | + | chr8_2:62411141-62411160 | Msa1260410:CDS | 60.0% |
CCGGCCTACCAACAGGATCA+AGG | - | chr8_2:62411243-62411262 | None:intergenic | 60.0% | |
GCAGTCTCCTCGGGTGTTAG+AGG | - | chr8_2:62412481-62412500 | None:intergenic | 60.0% | |
CTCACCCTGCAATGTCAGGG+TGG | - | chr8_2:62413721-62413740 | None:intergenic | 60.0% | |
TGGTGGCCGGAGAGCGAAGA+AGG | - | chr8_2:62410221-62410240 | None:intergenic | 65.0% | |
TCCGGCCACCACATTCTCGC+CGG | + | chr8_2:62410230-62410249 | Msa1260410:five_prime_UTR | 65.0% | |
TCCGGCGAGAATGTGGTGGC+CGG | - | chr8_2:62410234-62410253 | None:intergenic | 65.0% | |
GTGCTCCGGCGAGAATGTGG+TGG | - | chr8_2:62410238-62410257 | None:intergenic | 65.0% | |
GCGGTGGCCCGCAACTACTT+TGG | - | chr8_2:62412849-62412868 | None:intergenic | 65.0% | |
AAGTAGTTGCGGGCCACCGC+AGG | + | chr8_2:62412849-62412868 | Msa1260410:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 62410018 | 62413872 | 62410018 | ID=Msa1260410;Name=Msa1260410 |
chr8_2 | mRNA | 62410018 | 62413872 | 62410018 | ID=Msa1260410-mRNA-1;Parent=Msa1260410;Name=Msa1260410-mRNA-1;_AED=0.08;_eAED=0.08;_QI=533|0.85|0.87|1|1|1|8|460|524 |
chr8_2 | exon | 62410018 | 62410881 | 62410018 | ID=Msa1260410-mRNA-1:exon:19784;Parent=Msa1260410-mRNA-1 |
chr8_2 | exon | 62411074 | 62411162 | 62411074 | ID=Msa1260410-mRNA-1:exon:19785;Parent=Msa1260410-mRNA-1 |
chr8_2 | exon | 62411500 | 62411588 | 62411500 | ID=Msa1260410-mRNA-1:exon:19786;Parent=Msa1260410-mRNA-1 |
chr8_2 | exon | 62411710 | 62411875 | 62411710 | ID=Msa1260410-mRNA-1:exon:19787;Parent=Msa1260410-mRNA-1 |
chr8_2 | exon | 62411995 | 62412284 | 62411995 | ID=Msa1260410-mRNA-1:exon:19788;Parent=Msa1260410-mRNA-1 |
chr8_2 | exon | 62412411 | 62412615 | 62412411 | ID=Msa1260410-mRNA-1:exon:19789;Parent=Msa1260410-mRNA-1 |
chr8_2 | exon | 62412713 | 62412870 | 62412713 | ID=Msa1260410-mRNA-1:exon:19790;Parent=Msa1260410-mRNA-1 |
chr8_2 | exon | 62413166 | 62413872 | 62413166 | ID=Msa1260410-mRNA-1:exon:19791;Parent=Msa1260410-mRNA-1 |
chr8_2 | five_prime_UTR | 62410018 | 62410550 | 62410018 | ID=Msa1260410-mRNA-1:five_prime_utr;Parent=Msa1260410-mRNA-1 |
chr8_2 | CDS | 62410551 | 62410881 | 62410551 | ID=Msa1260410-mRNA-1:cds;Parent=Msa1260410-mRNA-1 |
chr8_2 | CDS | 62411074 | 62411162 | 62411074 | ID=Msa1260410-mRNA-1:cds;Parent=Msa1260410-mRNA-1 |
chr8_2 | CDS | 62411500 | 62411588 | 62411500 | ID=Msa1260410-mRNA-1:cds;Parent=Msa1260410-mRNA-1 |
chr8_2 | CDS | 62411710 | 62411875 | 62411710 | ID=Msa1260410-mRNA-1:cds;Parent=Msa1260410-mRNA-1 |
chr8_2 | CDS | 62411995 | 62412284 | 62411995 | ID=Msa1260410-mRNA-1:cds;Parent=Msa1260410-mRNA-1 |
chr8_2 | CDS | 62412411 | 62412615 | 62412411 | ID=Msa1260410-mRNA-1:cds;Parent=Msa1260410-mRNA-1 |
chr8_2 | CDS | 62412713 | 62412870 | 62412713 | ID=Msa1260410-mRNA-1:cds;Parent=Msa1260410-mRNA-1 |
chr8_2 | CDS | 62413166 | 62413412 | 62413166 | ID=Msa1260410-mRNA-1:cds;Parent=Msa1260410-mRNA-1 |
chr8_2 | three_prime_UTR | 62413413 | 62413872 | 62413413 | ID=Msa1260410-mRNA-1:three_prime_utr;Parent=Msa1260410-mRNA-1 |
Gene Sequence |
Protein sequence |