Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1261330 | AES91398.2 | 90.781 | 781 | 60 | 6 | 1 | 769 | 1 | 781 | 0.0 | 1424 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1261330 | sp|O48847|LUH_ARATH | 36.364 | 803 | 422 | 25 | 30 | 769 | 11 | 787 | 1.12e-129 | 407 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa1261330 | TR | LUG |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1261330 | Msa1261350 | 0.922057 | 1.610751e-88 | -8.615850e-47 |
Msa1261330 | Msa1261380 | 0.858559 | 7.583062e-63 | -8.615850e-47 |
Msa1173010 | Msa1261330 | 0.856600 | 2.883982e-62 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1261330 | MtrunA17_Chr4g0062881 | 92.560 | 457 | 32 | 1 | 315 | 769 | 1 | 457 | 0.0 | 860 |
Msa1261330 | MtrunA17_Chr1g0171711 | 38.191 | 796 | 416 | 19 | 30 | 769 | 11 | 786 | 3.09e-145 | 445 |
Msa1261330 | MtrunA17_Chr1g0148791 | 50.472 | 424 | 172 | 9 | 383 | 769 | 480 | 902 | 3.63e-120 | 383 |
Msa1261330 | MtrunA17_Chr1g0148791 | 37.344 | 241 | 134 | 7 | 150 | 383 | 182 | 412 | 1.41e-28 | 122 |
Msa1261330 | MtrunA17_Chr1g0148791 | 43.590 | 78 | 43 | 1 | 30 | 106 | 11 | 88 | 3.20e-14 | 77.0 |
Msa1261330 | MtrunA17_Chr3g0138311 | 48.826 | 426 | 174 | 9 | 383 | 769 | 477 | 897 | 1.26e-118 | 379 |
Msa1261330 | MtrunA17_Chr3g0138311 | 36.100 | 241 | 140 | 7 | 150 | 383 | 171 | 404 | 1.86e-28 | 122 |
Msa1261330 | MtrunA17_Chr4g0062891 | 82.775 | 209 | 30 | 1 | 18 | 220 | 3 | 211 | 8.84e-117 | 351 |
Msa1261330 | MtrunA17_Chr7g0237271 | 33.208 | 801 | 441 | 24 | 30 | 769 | 17 | 784 | 4.93e-116 | 369 |
Msa1261330 | MtrunA17_Chr7g0237241 | 33.459 | 798 | 432 | 25 | 31 | 769 | 18 | 775 | 3.13e-114 | 363 |
Msa1261330 | MtrunA17_Chr2g0282401 | 41.611 | 298 | 163 | 6 | 477 | 769 | 497 | 788 | 5.99e-66 | 234 |
Msa1261330 | MtrunA17_Chr4g0047051 | 36.237 | 287 | 176 | 6 | 487 | 769 | 25 | 308 | 3.30e-48 | 172 |
Msa1261330 | MtrunA17_Chr4g0047091 | 35.764 | 288 | 174 | 8 | 488 | 769 | 84 | 366 | 6.74e-42 | 157 |
Msa1261330 | MtrunA17_Chr4g0047071 | 33.684 | 285 | 171 | 8 | 498 | 769 | 3 | 282 | 7.45e-38 | 142 |
Msa1261330 | MtrunA17_Chr4g0047061 | 36.290 | 248 | 145 | 8 | 528 | 769 | 90 | 330 | 1.58e-36 | 140 |
Msa1261330 | MtrunA17_Chr4g0047101 | 37.118 | 229 | 120 | 8 | 498 | 718 | 32 | 244 | 2.76e-31 | 123 |
Msa1261330 | MtrunA17_Chr5g0405851 | 29.470 | 302 | 178 | 12 | 494 | 768 | 156 | 449 | 6.12e-22 | 99.8 |
Msa1261330 | MtrunA17_Chr3g0093681 | 28.369 | 282 | 184 | 9 | 498 | 768 | 278 | 552 | 7.91e-22 | 100 |
Msa1261330 | MtrunA17_Chr1g0172501 | 28.369 | 282 | 184 | 9 | 498 | 768 | 278 | 552 | 2.65e-21 | 98.6 |
Msa1261330 | MtrunA17_Chr6g0448921 | 26.210 | 248 | 173 | 6 | 489 | 730 | 13 | 256 | 1.66e-17 | 87.4 |
Msa1261330 | MtrunA17_Chr4g0047111 | 32.886 | 149 | 71 | 5 | 573 | 718 | 5 | 127 | 4.58e-17 | 79.0 |
Msa1261330 | MtrunA17_Chr3g0136971 | 28.899 | 218 | 141 | 7 | 492 | 703 | 419 | 628 | 1.76e-16 | 84.0 |
Msa1261330 | MtrunA17_Chr1g0185501 | 23.427 | 286 | 204 | 10 | 495 | 768 | 30 | 312 | 1.48e-14 | 75.5 |
Msa1261330 | MtrunA17_Chr1g0185501 | 23.729 | 236 | 168 | 5 | 460 | 684 | 79 | 313 | 8.53e-11 | 63.9 |
Msa1261330 | MtrunA17_Chr2g0281451 | 23.715 | 253 | 183 | 6 | 484 | 730 | 7 | 255 | 5.32e-13 | 73.2 |
Msa1261330 | MtrunA17_Chr4g0067151 | 25.764 | 229 | 152 | 6 | 522 | 735 | 15 | 240 | 1.13e-12 | 70.1 |
Msa1261330 | MtrunA17_Chr4g0067151 | 27.136 | 199 | 131 | 6 | 500 | 687 | 86 | 281 | 1.58e-12 | 69.3 |
Msa1261330 | MtrunA17_Chr4g0067151 | 25.980 | 204 | 139 | 6 | 492 | 684 | 120 | 322 | 9.37e-12 | 67.0 |
Msa1261330 | MtrunA17_Chr2g0308391 | 22.849 | 337 | 222 | 12 | 466 | 769 | 101 | 432 | 3.56e-12 | 69.3 |
Msa1261330 | MtrunA17_Chr8g0392701 | 26.423 | 246 | 159 | 11 | 506 | 736 | 30 | 268 | 1.30e-11 | 66.6 |
Msa1261330 | MtrunA17_Chr1g0168391 | 24.865 | 185 | 131 | 5 | 506 | 683 | 238 | 421 | 2.99e-11 | 66.6 |
Msa1261330 | MtrunA17_Chr4g0035611 | 22.183 | 284 | 181 | 10 | 495 | 743 | 54 | 332 | 4.11e-11 | 67.0 |
Msa1261330 | MtrunA17_Chr2g0295791 | 23.551 | 276 | 195 | 8 | 507 | 769 | 185 | 457 | 6.28e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1261330 | AT2G32700.6 | 36.454 | 801 | 422 | 24 | 30 | 769 | 11 | 785 | 1.91e-132 | 412 |
Msa1261330 | AT2G32700.2 | 36.364 | 803 | 422 | 25 | 30 | 769 | 11 | 787 | 1.14e-130 | 407 |
Msa1261330 | AT2G32700.5 | 36.364 | 803 | 422 | 25 | 30 | 769 | 11 | 787 | 1.14e-130 | 407 |
Msa1261330 | AT2G32700.1 | 36.364 | 803 | 422 | 25 | 30 | 769 | 11 | 787 | 1.14e-130 | 407 |
Msa1261330 | AT2G32700.4 | 36.364 | 803 | 422 | 25 | 30 | 769 | 11 | 787 | 1.14e-130 | 407 |
Msa1261330 | AT2G32700.3 | 36.364 | 803 | 422 | 25 | 30 | 769 | 11 | 787 | 1.14e-130 | 407 |
Msa1261330 | AT2G32700.7 | 35.897 | 819 | 423 | 25 | 30 | 769 | 11 | 806 | 1.11e-129 | 405 |
Msa1261330 | AT4G32551.1 | 49.517 | 414 | 178 | 7 | 386 | 769 | 519 | 931 | 4.47e-122 | 389 |
Msa1261330 | AT4G32551.1 | 36.111 | 252 | 147 | 8 | 134 | 379 | 195 | 438 | 1.00e-28 | 124 |
Msa1261330 | AT4G32551.1 | 44.872 | 78 | 42 | 1 | 30 | 106 | 11 | 88 | 8.51e-15 | 79.3 |
Msa1261330 | AT4G32551.2 | 49.517 | 414 | 178 | 7 | 386 | 769 | 557 | 969 | 2.00e-121 | 388 |
Msa1261330 | AT4G32551.2 | 31.724 | 290 | 146 | 9 | 134 | 379 | 195 | 476 | 1.42e-23 | 107 |
Msa1261330 | AT4G32551.2 | 44.872 | 78 | 42 | 1 | 30 | 106 | 11 | 88 | 9.06e-15 | 79.0 |
Msa1261330 | AT2G41500.1 | 29.787 | 282 | 180 | 9 | 498 | 768 | 261 | 535 | 3.52e-22 | 101 |
Msa1261330 | AT2G41500.2 | 29.787 | 282 | 180 | 9 | 498 | 768 | 261 | 535 | 3.52e-22 | 101 |
Msa1261330 | AT1G61210.3 | 25.483 | 259 | 180 | 7 | 478 | 730 | 4 | 255 | 1.53e-17 | 88.2 |
Msa1261330 | AT1G61210.3 | 23.744 | 219 | 149 | 7 | 497 | 700 | 105 | 320 | 5.14e-11 | 67.0 |
Msa1261330 | AT1G61210.1 | 25.483 | 259 | 180 | 7 | 478 | 730 | 4 | 255 | 1.81e-17 | 87.8 |
Msa1261330 | AT1G61210.1 | 23.744 | 219 | 149 | 7 | 497 | 700 | 105 | 320 | 7.83e-11 | 66.6 |
Msa1261330 | AT1G61210.2 | 25.483 | 259 | 180 | 7 | 478 | 730 | 4 | 255 | 1.97e-17 | 87.8 |
Msa1261330 | AT1G61210.2 | 23.744 | 219 | 149 | 7 | 497 | 700 | 105 | 320 | 8.24e-11 | 66.2 |
Msa1261330 | AT5G25150.1 | 29.091 | 220 | 144 | 5 | 489 | 703 | 415 | 627 | 3.95e-17 | 86.3 |
Msa1261330 | AT5G25150.2 | 29.091 | 220 | 144 | 5 | 489 | 703 | 415 | 627 | 4.87e-17 | 85.9 |
Msa1261330 | AT5G23430.1 | 27.092 | 251 | 167 | 7 | 489 | 730 | 13 | 256 | 9.65e-17 | 85.5 |
Msa1261330 | AT5G23430.3 | 27.092 | 251 | 167 | 7 | 489 | 730 | 13 | 256 | 1.02e-16 | 85.1 |
Msa1261330 | AT5G23430.2 | 27.092 | 251 | 167 | 7 | 489 | 730 | 13 | 256 | 1.02e-16 | 85.1 |
Msa1261330 | AT5G08390.1 | 26.295 | 251 | 169 | 7 | 489 | 730 | 13 | 256 | 4.78e-16 | 83.2 |
Msa1261330 | AT3G49660.1 | 24.658 | 292 | 196 | 12 | 495 | 768 | 27 | 312 | 1.09e-15 | 79.3 |
Msa1261330 | AT4G02730.1 | 23.875 | 289 | 202 | 9 | 495 | 769 | 46 | 330 | 2.99e-15 | 78.2 |
Msa1261330 | AT5G60940.1 | 23.934 | 305 | 198 | 11 | 495 | 769 | 126 | 426 | 1.31e-13 | 74.3 |
Msa1261330 | AT5G60940.2 | 23.934 | 305 | 198 | 11 | 495 | 769 | 34 | 334 | 2.85e-13 | 72.4 |
Msa1261330 | AT5G13480.3 | 23.297 | 279 | 199 | 9 | 500 | 768 | 119 | 392 | 3.40e-13 | 73.6 |
Msa1261330 | AT5G13480.1 | 23.297 | 279 | 199 | 9 | 500 | 768 | 131 | 404 | 3.81e-13 | 73.6 |
Msa1261330 | AT5G13480.4 | 23.297 | 279 | 199 | 9 | 500 | 768 | 119 | 392 | 4.09e-13 | 73.6 |
Msa1261330 | AT5G13480.2 | 23.297 | 279 | 199 | 9 | 500 | 768 | 142 | 415 | 5.18e-13 | 73.2 |
Msa1261330 | AT2G33340.2 | 25.668 | 187 | 129 | 4 | 506 | 683 | 236 | 421 | 1.21e-12 | 71.6 |
Msa1261330 | AT2G33340.1 | 25.668 | 187 | 129 | 4 | 506 | 683 | 236 | 421 | 1.21e-12 | 71.6 |
Msa1261330 | AT2G33340.3 | 25.668 | 187 | 129 | 4 | 506 | 683 | 236 | 421 | 1.38e-12 | 71.2 |
Msa1261330 | AT1G11160.2 | 24.506 | 253 | 182 | 5 | 439 | 684 | 44 | 294 | 5.86e-12 | 70.1 |
Msa1261330 | AT1G11160.1 | 24.603 | 252 | 181 | 5 | 439 | 683 | 44 | 293 | 5.97e-12 | 70.1 |
Msa1261330 | AT1G11160.4 | 24.603 | 252 | 181 | 5 | 439 | 683 | 44 | 293 | 6.23e-12 | 70.1 |
Msa1261330 | AT5G08560.1 | 23.904 | 251 | 175 | 8 | 530 | 768 | 270 | 516 | 1.09e-11 | 68.6 |
Msa1261330 | AT5G08560.2 | 23.904 | 251 | 175 | 8 | 530 | 768 | 270 | 516 | 1.09e-11 | 68.6 |
Msa1261330 | AT5G08560.3 | 23.904 | 251 | 175 | 8 | 530 | 768 | 270 | 516 | 1.09e-11 | 68.6 |
Msa1261330 | AT1G11160.3 | 25.000 | 240 | 171 | 5 | 452 | 684 | 15 | 252 | 2.11e-11 | 68.2 |
Msa1261330 | AT2G43770.1 | 20.280 | 286 | 204 | 11 | 500 | 767 | 61 | 340 | 6.71e-11 | 65.1 |
Msa1261330 | AT5G67320.1 | 27.778 | 162 | 104 | 4 | 494 | 643 | 450 | 610 | 9.52e-11 | 65.9 |
Find 190 sgRNAs with CRISPR-Local
Find 499 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCTCTTCGGACATTTAC+AGG | 0.170744 | 8_2:+63641816 | Msa1261330:CDS |
GCTCTTCAAGCGTAGATTTC+AGG | 0.213054 | 8_2:-63640945 | None:intergenic |
CACCATAGGAGCATTGTTTA+TGG | 0.233609 | 8_2:-63636949 | None:intergenic |
CTTCCGGTCAACTTGACTTT+TGG | 0.234717 | 8_2:-63639880 | None:intergenic |
CCTGCTCAGCTGCAGCAATA+TGG | 0.235792 | 8_2:+63636885 | Msa1261330:CDS |
TATTTGTTCTTGTGATAATA+AGG | 0.238048 | 8_2:+63641887 | Msa1261330:CDS |
AGTACCATGAACACTGTAAA+TGG | 0.257174 | 8_2:-63637621 | None:intergenic |
AAGTCCAGATGAGGCAATTC+AGG | 0.270725 | 8_2:-63639700 | None:intergenic |
TCAGTGTGCTGGCACTCTTC+TGG | 0.277434 | 8_2:+63642493 | Msa1261330:CDS |
GCGATTTCATACGCTTTATC+AGG | 0.280157 | 8_2:-63635200 | None:intergenic |
GAACAAATGTAATACCTTAA+AGG | 0.280380 | 8_2:-63637066 | None:intergenic |
GCTTGTCCATAATCAAAATA+TGG | 0.283609 | 8_2:+63639600 | Msa1261330:CDS |
TTGTGCAGGTGTTACAATAT+TGG | 0.283850 | 8_2:-63639668 | None:intergenic |
TGTGCAGGTGTTACAATATT+GGG | 0.283894 | 8_2:-63639667 | None:intergenic |
GCACTTGCTGTTGATAATAT+AGG | 0.286469 | 8_2:+63642923 | Msa1261330:three_prime_UTR |
CTGCTCAGCTGCAGCAATAT+GGG | 0.293474 | 8_2:+63636886 | Msa1261330:CDS |
CCATATTGCTGCAGCTGAGC+AGG | 0.294656 | 8_2:-63636885 | None:intergenic |
AAGCAGTAAATGGCATGTTT+TGG | 0.303297 | 8_2:+63643033 | Msa1261330:three_prime_UTR |
GAAGGCTGTCCACCAGTTCT+TGG | 0.309028 | 8_2:-63637242 | None:intergenic |
TAATATAGGTTTACTCCTTC+AGG | 0.309523 | 8_2:+63642937 | Msa1261330:three_prime_UTR |
GATGGAAAACTATTTGTTAC+TGG | 0.314915 | 8_2:+63640750 | Msa1261330:CDS |
TACTGGTGGTCGTGATAAAA+AGG | 0.316571 | 8_2:+63640767 | Msa1261330:CDS |
TTGCAAATGGTAGTTGTATT+GGG | 0.320162 | 8_2:+63641928 | Msa1261330:CDS |
TTTCCCTGAATTGCCTCATC+TGG | 0.320474 | 8_2:+63639696 | Msa1261330:CDS |
CAGGTTGAAGACTCCCCTTC+AGG | 0.322856 | 8_2:+63637022 | Msa1261330:CDS |
GAAACTGTGTACGAAGAAAA+AGG | 0.327950 | 8_2:-63635259 | None:intergenic |
TGTTATTTGGCAGGCTCATA+TGG | 0.330746 | 8_2:+63640422 | Msa1261330:intron |
AGAACTGGTGGACAGCCTTC+AGG | 0.335242 | 8_2:+63637245 | Msa1261330:CDS |
ATTGCAAATGGTAGTTGTAT+TGG | 0.340157 | 8_2:+63641927 | Msa1261330:CDS |
CTCCTATGGTGAGGCAGAAC+CGG | 0.346361 | 8_2:+63636961 | Msa1261330:CDS |
ATTGTAACACCTGCACAAAT+TGG | 0.348653 | 8_2:+63639673 | Msa1261330:CDS |
TAATTCAGTCGCTTATGCTC+TGG | 0.350259 | 8_2:+63642768 | Msa1261330:intron |
GTGAGATTTCAACCTGGTTT+GGG | 0.350453 | 8_2:+63642067 | Msa1261330:CDS |
CAAATAAGGCCACGTTTACT+TGG | 0.352863 | 8_2:-63641870 | None:intergenic |
TATTATCACAAGAACAAATA+AGG | 0.354896 | 8_2:-63641884 | None:intergenic |
ATGGCAGCAACTTATGTTTC+AGG | 0.355840 | 8_2:+63639519 | Msa1261330:CDS |
GCACTCTTCTGGAAATTATC+TGG | 0.356961 | 8_2:+63642504 | Msa1261330:CDS |
GTTCAGACTTGCTCATATAT+AGG | 0.360394 | 8_2:+63642999 | Msa1261330:three_prime_UTR |
CTTATGCTACAAGCAGTAAA+TGG | 0.360839 | 8_2:+63643023 | Msa1261330:three_prime_UTR |
CCGATAAAACTGTAAAGGTT+TGG | 0.363852 | 8_2:+63641031 | Msa1261330:CDS |
GGTGAGATTTCAACCTGGTT+TGG | 0.364221 | 8_2:+63642066 | Msa1261330:CDS |
TTTATCAGGTTCATCGCATT+TGG | 0.370622 | 8_2:-63635186 | None:intergenic |
GGCAATGTTGAACAGAATAT+TGG | 0.370914 | 8_2:+63635924 | Msa1261330:CDS |
ATAATAAGGAAATAAGATAT+TGG | 0.375637 | 8_2:+63641901 | Msa1261330:CDS |
AATCAAAACCAGCAACTTCC+AGG | 0.378139 | 8_2:+63637438 | Msa1261330:CDS |
CTTGTAACCCTGGAAGTTGC+TGG | 0.378969 | 8_2:-63637446 | None:intergenic |
TCTCAAGAGCAACAGATCTT+TGG | 0.380554 | 8_2:+63640449 | Msa1261330:CDS |
AACACAATGGGATCATCTTC+TGG | 0.380898 | 8_2:+63639957 | Msa1261330:CDS |
ACCATAGGAGCATTGTTTAT+GGG | 0.382702 | 8_2:-63636948 | None:intergenic |
CATATTGCTGCAGCTGAGCA+GGG | 0.392189 | 8_2:-63636884 | None:intergenic |
CGATAAAACTGTAAAGGTTT+GGG | 0.397292 | 8_2:+63641032 | Msa1261330:CDS |
TGCAGCCTGGTCATTCTCTT+CGG | 0.397318 | 8_2:+63641805 | Msa1261330:intron |
GTTTGCAGTTCCAGAGCTAT+TGG | 0.397684 | 8_2:-63639937 | None:intergenic |
ACCAGCATTATCTTACCTTA+AGG | 0.398546 | 8_2:+63636144 | Msa1261330:CDS |
AAGGTTGGTTGATACCTTAT+GGG | 0.400769 | 8_2:-63639731 | None:intergenic |
GGATCCATTTACAGTGTTCA+TGG | 0.401695 | 8_2:+63637617 | Msa1261330:CDS |
TGCAGACACGATTGCCAACT+TGG | 0.402245 | 8_2:+63640000 | Msa1261330:CDS |
CCATCAAAACCACTGACAAA+TGG | 0.409375 | 8_2:-63639562 | None:intergenic |
CAGGGCTCTGCAATATGAAC+TGG | 0.414323 | 8_2:-63636866 | None:intergenic |
GGCATCTGTTTGTAATGATC+TGG | 0.417806 | 8_2:+63642525 | Msa1261330:CDS |
GAGTTGCAGATTTAAATTGC+AGG | 0.422031 | 8_2:+63642147 | Msa1261330:CDS |
CTGCCATGGTGAAAATTGAT+TGG | 0.424275 | 8_2:-63639503 | None:intergenic |
ATGATAGGACTTTCAAGATC+TGG | 0.438220 | 8_2:+63642891 | Msa1261330:CDS |
AATTCAGTCGCTTATGCTCT+GGG | 0.438597 | 8_2:+63642769 | Msa1261330:intron |
TTTACAAGAGAAACTTCAAC+AGG | 0.441555 | 8_2:+63637410 | Msa1261330:CDS |
ATGAGATTCAGGCTTCTCTA+TGG | 0.444675 | 8_2:+63640905 | Msa1261330:intron |
CTCTGGGCCATTGGATCTGA+TGG | 0.445049 | 8_2:+63642553 | Msa1261330:CDS |
AGCCAAAGTCTTACTGCTAA+AGG | 0.448358 | 8_2:-63638590 | None:intergenic |
CCATTGGATCTGATGGCAGC+GGG | 0.448766 | 8_2:+63642560 | Msa1261330:CDS |
GAACTGGTGGACAGCCTTCA+GGG | 0.451874 | 8_2:+63637246 | Msa1261330:CDS |
TTCTATTTGCAGACAAACAT+TGG | 0.453234 | 8_2:+63637371 | Msa1261330:intron |
GCTTATGCTCTGGGACTTTG+AGG | 0.454130 | 8_2:+63642778 | Msa1261330:CDS |
TGCTCAGCTGCAGCAATATG+GGG | 0.454725 | 8_2:+63636887 | Msa1261330:CDS |
TTGGCAGTATCAGATGTTAC+TGG | 0.456091 | 8_2:+63642848 | Msa1261330:CDS |
TGGCTTCAGTTAGTCATGAT+AGG | 0.456464 | 8_2:+63642876 | Msa1261330:CDS |
TAATGATCTGGTTAAACTCT+GGG | 0.456770 | 8_2:+63642537 | Msa1261330:CDS |
TCCCATAAACAATGCTCCTA+TGG | 0.458377 | 8_2:+63636947 | Msa1261330:CDS |
GCCTTGTTCGTTCAGTGTGC+TGG | 0.458741 | 8_2:+63642482 | Msa1261330:CDS |
AACAAGGCACAATCCTCGTT+TGG | 0.460063 | 8_2:-63637203 | None:intergenic |
CTGGTTAAACTCTGGGCCAT+TGG | 0.460194 | 8_2:+63642544 | Msa1261330:CDS |
GTAATGATCTGGTTAAACTC+TGG | 0.461731 | 8_2:+63642536 | Msa1261330:CDS |
TGCACTCATGCCACTGTGCA+TGG | 0.464962 | 8_2:-63637564 | None:intergenic |
TGATTATGGACAAGCAAACT+TGG | 0.465215 | 8_2:-63639592 | None:intergenic |
AACCACCTACAGAATTTGAT+TGG | 0.466272 | 8_2:-63639639 | None:intergenic |
ATAATCAAAATATGGTTCCT+TGG | 0.467781 | 8_2:+63639608 | Msa1261330:CDS |
TCAGGTCTTGCCAATAGCTC+TGG | 0.469604 | 8_2:+63639927 | Msa1261330:CDS |
CGAAAAGTAGGATCAAGTTC+AGG | 0.470472 | 8_2:+63639909 | Msa1261330:CDS |
TCAAAATATTGTAGCTAGGA+TGG | 0.471613 | 8_2:-63642636 | None:intergenic |
TTCCTATGTTTGTTGCCTGA+AGG | 0.483466 | 8_2:-63642952 | None:intergenic |
GCAAGAATATTTCATGATGA+AGG | 0.484394 | 8_2:+63635903 | Msa1261330:CDS |
ACTTATGTTTCAGGCACAGC+AGG | 0.484632 | 8_2:+63639528 | Msa1261330:CDS |
ATCAGATGTTACTGGATTGG+TGG | 0.488563 | 8_2:+63642856 | Msa1261330:CDS |
CTCCTTCAGGCAACAAACAT+AGG | 0.491751 | 8_2:+63642950 | Msa1261330:three_prime_UTR |
AACGAAATAGCACCAAGAAC+TGG | 0.496303 | 8_2:+63637230 | Msa1261330:CDS |
GCCATTGGATCTGATGGCAG+CGG | 0.497982 | 8_2:+63642559 | Msa1261330:CDS |
TCCTATGGTGAGGCAGAACC+GGG | 0.500407 | 8_2:+63636962 | Msa1261330:CDS |
GAAAACCGCATTACTTACAT+TGG | 0.501280 | 8_2:-63643063 | None:intergenic |
AGATATTGGAATATTGCAAA+TGG | 0.505994 | 8_2:+63641915 | Msa1261330:CDS |
TGCATCAACACAGAATCAAT+TGG | 0.506774 | 8_2:+63640046 | Msa1261330:CDS |
TCTGGAACTGCAAACACAAT+GGG | 0.508959 | 8_2:+63639945 | Msa1261330:CDS |
TAATGAGATCAAGCATGGAT+TGG | 0.510535 | 8_2:+63640689 | Msa1261330:CDS |
AAAAGTGTATAAAATAAAAG+TGG | 0.511274 | 8_2:+63643103 | Msa1261330:three_prime_UTR |
GGCAATCGTGTCTGCATAGT+TGG | 0.512704 | 8_2:-63639993 | None:intergenic |
ATACCATTCTGTTGCCAAGT+TGG | 0.513520 | 8_2:-63640014 | None:intergenic |
GATACAAGCTTGTCGTGTGC+AGG | 0.517006 | 8_2:-63642821 | None:intergenic |
TGTTGTCACTTCTCCTCGGA+TGG | 0.520645 | 8_2:+63640732 | Msa1261330:CDS |
TTGTAAAATGCTAAGTGCAC+TGG | 0.525997 | 8_2:-63637394 | None:intergenic |
CCCGCTGCCATCAGATCCAA+TGG | 0.526518 | 8_2:-63642560 | None:intergenic |
TCATTTAATGAGATCAAGCA+TGG | 0.527559 | 8_2:+63640684 | Msa1261330:CDS |
ATTTCAACCTGGTTTGGGAA+AGG | 0.527606 | 8_2:+63642072 | Msa1261330:CDS |
TAGCAACATAGAACATGCTT+GGG | 0.529135 | 8_2:-63640999 | None:intergenic |
TCAGGGAAACCAATTTGTGC+AGG | 0.529698 | 8_2:-63639682 | None:intergenic |
GCAAGAACCTTTCCCAAACC+AGG | 0.531493 | 8_2:-63642079 | None:intergenic |
CATACAATTGATTCTTCATG+AGG | 0.532585 | 8_2:-63635875 | None:intergenic |
GTTGTTCTCTCTTCGAGTGG+TGG | 0.533117 | 8_2:+63636071 | Msa1261330:CDS |
AGTCCAGATGAGGCAATTCA+GGG | 0.534232 | 8_2:-63639699 | None:intergenic |
AAATAAAAGTGGTAAACCTC+AGG | 0.534634 | 8_2:+63643114 | Msa1261330:three_prime_UTR |
ATGATCAAAATATTGTAGCT+AGG | 0.535188 | 8_2:-63642640 | None:intergenic |
CTCAGCCGATAAAACTGTAA+AGG | 0.537151 | 8_2:+63641026 | Msa1261330:CDS |
CAGGCAACAAACATAGGAAG+TGG | 0.537177 | 8_2:+63642956 | Msa1261330:three_prime_UTR |
CATCAAAAGCATTTCCCTGA+AGG | 0.539630 | 8_2:-63637037 | None:intergenic |
GTAGCAACATAGAACATGCT+TGG | 0.539825 | 8_2:-63641000 | None:intergenic |
TCATCTCTTGCTGATTCAGA+TGG | 0.540127 | 8_2:+63640492 | Msa1261330:CDS |
CAAGAGCAACAGATCTTTGG+CGG | 0.543177 | 8_2:+63640452 | Msa1261330:CDS |
TGCTATTTCGTTCAACAACA+AGG | 0.543891 | 8_2:-63637219 | None:intergenic |
CCGGGTTACTTCTAATACAA+TGG | 0.545781 | 8_2:+63636980 | Msa1261330:CDS |
AATGGCAACAAAACTAAATG+AGG | 0.546151 | 8_2:+63636998 | Msa1261330:CDS |
GGACTTAGATATGACCCATA+AGG | 0.547552 | 8_2:+63639717 | Msa1261330:CDS |
CCATTGTATTAGAAGTAACC+CGG | 0.548960 | 8_2:-63636980 | None:intergenic |
CGACAAGCTTGTATCTGCAT+TGG | 0.551855 | 8_2:+63642829 | Msa1261330:CDS |
TCTCAAGCTGTTGTTTCAGA+AGG | 0.560493 | 8_2:+63637596 | Msa1261330:CDS |
TTTGATTGGCCATCGTTCCA+AGG | 0.560547 | 8_2:-63639625 | None:intergenic |
GTCTGCATAGTTGGTGTAGA+GGG | 0.561086 | 8_2:-63639984 | None:intergenic |
CTTCCAAAAGTCAAGTTGAC+CGG | 0.561136 | 8_2:+63639877 | Msa1261330:CDS |
TGACTGTTGTCACTTCTCCT+CGG | 0.561258 | 8_2:+63640728 | Msa1261330:CDS |
AGGTTGAAGACTCCCCTTCA+GGG | 0.566579 | 8_2:+63637023 | Msa1261330:CDS |
GGTAGCGACTTGACTCTGAA+AGG | 0.568593 | 8_2:+63638563 | Msa1261330:CDS |
GTAGCGACTTGACTCTGAAA+GGG | 0.570038 | 8_2:+63638564 | Msa1261330:CDS |
AAGATCTGTTGCTCTTGAGA+TGG | 0.572024 | 8_2:-63640446 | None:intergenic |
ATCAAAAGCATTTCCCTGAA+GGG | 0.572579 | 8_2:-63637036 | None:intergenic |
CTCTGGAACTGCAAACACAA+TGG | 0.574440 | 8_2:+63639944 | Msa1261330:CDS |
TTATCAGGGTGGTGTAACTC+AGG | 0.575396 | 8_2:+63642045 | Msa1261330:intron |
CTGGTTGTTCTCTCTTCGAG+TGG | 0.576679 | 8_2:+63636068 | Msa1261330:CDS |
CAACAAAACTAAATGAGGAC+AGG | 0.577019 | 8_2:+63637003 | Msa1261330:CDS |
ACTTGGCAACAGAATGGTAT+CGG | 0.578417 | 8_2:+63640017 | Msa1261330:CDS |
ACCTTAAGGTAAGATAATGC+TGG | 0.580228 | 8_2:-63636145 | None:intergenic |
TTGCCAACTTGGCAACAGAA+TGG | 0.586345 | 8_2:+63640011 | Msa1261330:CDS |
CGCTTGAAGAGCACACTCAA+CGG | 0.586936 | 8_2:+63640956 | Msa1261330:CDS |
TTTACGATTACTTGTAACCC+TGG | 0.588248 | 8_2:-63637456 | None:intergenic |
GAATTGTTTATGGCCAAACA+AGG | 0.589606 | 8_2:+63636106 | Msa1261330:CDS |
CTGAACGAACAAGGCTCATG+TGG | 0.591408 | 8_2:-63642474 | None:intergenic |
TTAGTTAATCCATTTGTCAG+TGG | 0.592463 | 8_2:+63639553 | Msa1261330:CDS |
AGTATCAGATGTTACTGGAT+TGG | 0.595920 | 8_2:+63642853 | Msa1261330:CDS |
AATATGGTTCCTTGGAACGA+TGG | 0.597683 | 8_2:+63639616 | Msa1261330:CDS |
ATTCTCTTCGGACATTTACA+GGG | 0.599684 | 8_2:+63641817 | Msa1261330:CDS |
ACCCGGTTCTGCCTCACCAT+AGG | 0.601611 | 8_2:-63636963 | None:intergenic |
GCCAGCACACTGAACGAACA+AGG | 0.603185 | 8_2:-63642483 | None:intergenic |
AGGTGTTACAATATTGGGAA+TGG | 0.603227 | 8_2:-63639662 | None:intergenic |
ATCGCATTTGGATTGAGACA+TGG | 0.604361 | 8_2:-63635174 | None:intergenic |
TCAAAAGCATTTCCCTGAAG+GGG | 0.605318 | 8_2:-63637035 | None:intergenic |
GGAAAACTATTTGTTACTGG+TGG | 0.605813 | 8_2:+63640753 | Msa1261330:CDS |
ATCAAAACCAGCAACTTCCA+GGG | 0.612502 | 8_2:+63637439 | Msa1261330:CDS |
TGAAACATAAGTTGCTGCCA+TGG | 0.615754 | 8_2:-63639517 | None:intergenic |
GTTTATGGGACAGAGAACAT+TGG | 0.619165 | 8_2:-63636934 | None:intergenic |
GGCCAATCAAATTCTGTAGG+TGG | 0.625840 | 8_2:+63639637 | Msa1261330:CDS |
CCGCGGTCAGCTTCCAAACG+AGG | 0.626261 | 8_2:+63637190 | Msa1261330:CDS |
GATGGCCAATCAAATTCTGT+AGG | 0.638312 | 8_2:+63639634 | Msa1261330:CDS |
CATTGGATCTGATGGCAGCG+GGG | 0.639120 | 8_2:+63642561 | Msa1261330:CDS |
TGTCTGCATAGTTGGTGTAG+AGG | 0.639786 | 8_2:-63639985 | None:intergenic |
GAAATAGCACCAAGAACTGG+TGG | 0.641067 | 8_2:+63637233 | Msa1261330:CDS |
AATTGATTGGAAGATTGTGA+AGG | 0.646797 | 8_2:-63639490 | None:intergenic |
GCGACTTGACTCTGAAAGGG+TGG | 0.648057 | 8_2:+63638567 | Msa1261330:CDS |
ATGATTAGTAGGCACCCTGA+AGG | 0.649924 | 8_2:-63637260 | None:intergenic |
GTCATATCTAAGTCCAGATG+AGG | 0.650884 | 8_2:-63639709 | None:intergenic |
GGGATTGGATGAGCATCATG+CGG | 0.660736 | 8_2:+63639438 | Msa1261330:intron |
TAAACAATGCTCCTATGGTG+AGG | 0.661726 | 8_2:+63636952 | Msa1261330:CDS |
CCTCGTTTGGAAGCTGACCG+CGG | 0.663224 | 8_2:-63637190 | None:intergenic |
TTTGATCATTTGCTGCAGTG+AGG | 0.663983 | 8_2:+63642654 | Msa1261330:CDS |
AAATTTAGGCTCAAGAAATG+CGG | 0.670041 | 8_2:+63636817 | Msa1261330:intron |
TATGGGGCTGAAACTCAAGA+AGG | 0.670598 | 8_2:+63636903 | Msa1261330:CDS |
ACTCAGGTGAGATTTCAACC+TGG | 0.671694 | 8_2:+63642061 | Msa1261330:CDS |
AATGTCCGAAGAGAATGACC+AGG | 0.680463 | 8_2:-63641810 | None:intergenic |
CACTCGAAGAGAGAACAACC+AGG | 0.686015 | 8_2:-63636067 | None:intergenic |
GACTTTCATCCAAGTAAACG+TGG | 0.686140 | 8_2:+63641861 | Msa1261330:CDS |
GGTGTAGTTATGGATGCACC+TGG | 0.690437 | 8_2:+63636049 | Msa1261330:intron |
TCAGATGGACGAGTTGACCA+AGG | 0.691951 | 8_2:+63640507 | Msa1261330:CDS |
GTGGCATGAGTGCAATGATG+AGG | 0.712221 | 8_2:+63637573 | Msa1261330:CDS |
CTGAATCAGGCCATGCACAG+TGG | 0.713979 | 8_2:+63637554 | Msa1261330:intron |
ATAATGAATGCTTATACCCG+CGG | 0.714622 | 8_2:+63637173 | Msa1261330:CDS |
GTAGCTAGGATGGAAAACGC+AGG | 0.717458 | 8_2:-63642626 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTTAAAAAATTATTAT+TGG | + | chr8_2:63635731-63635750 | Msa1261330:intron | 0.0% |
!! | TTATATTAAAATTTAAGCAT+GGG | + | chr8_2:63641291-63641310 | Msa1261330:intron | 10.0% |
!!! | CATTAAATCAATTTAGATTT+TGG | - | chr8_2:63635408-63635427 | None:intergenic | 15.0% |
!!! | TGAATTTGAGTTTTAATTTT+TGG | + | chr8_2:63636021-63636040 | Msa1261330:intron | 15.0% |
!! | TTGATTACATCTATTAAAAT+GGG | - | chr8_2:63636179-63636198 | None:intergenic | 15.0% |
!! | ATTGATTACATCTATTAAAA+TGG | - | chr8_2:63636180-63636199 | None:intergenic | 15.0% |
!!! | TTTGGAATTTTTTAATACAA+GGG | + | chr8_2:63636364-63636383 | Msa1261330:intron | 15.0% |
!! | AGAAATCATATAAAAAAATC+AGG | - | chr8_2:63637109-63637128 | None:intergenic | 15.0% |
!! | TTCATTATCTGTATATTAAA+TGG | - | chr8_2:63637161-63637180 | None:intergenic | 15.0% |
!!! | TTTGAATATTTAGCATTTTA+AGG | + | chr8_2:63638910-63638929 | Msa1261330:intron | 15.0% |
!! | ATTTAGATCATTTGTAATAA+TGG | + | chr8_2:63638976-63638995 | Msa1261330:intron | 15.0% |
!!! | ATTAGATCTCAATTATTTTA+GGG | + | chr8_2:63639418-63639437 | Msa1261330:intron | 15.0% |
!! | ATCATTTCATAATTAAAAGT+TGG | - | chr8_2:63640809-63640828 | None:intergenic | 15.0% |
!! | AATAAGATGTTATTAGAAAT+GGG | - | chr8_2:63641200-63641219 | None:intergenic | 15.0% |
!!! | CTTAAATTTTAATATAAGAC+AGG | - | chr8_2:63641288-63641307 | None:intergenic | 15.0% |
!! | CTTATATTAAAATTTAAGCA+TGG | + | chr8_2:63641290-63641309 | Msa1261330:intron | 15.0% |
!! | ACTAAAAAATGATAAATCAT+AGG | - | chr8_2:63641672-63641691 | None:intergenic | 15.0% |
!!! | TTTATCATTTTTTAGTCTTA+TGG | + | chr8_2:63641676-63641695 | Msa1261330:intron | 15.0% |
!! | ATAATAAGGAAATAAGATAT+TGG | + | chr8_2:63641901-63641920 | Msa1261330:CDS | 15.0% |
!!! | AAAAGTGTATAAAATAAAAG+TGG | + | chr8_2:63643103-63643122 | Msa1261330:three_prime_UTR | 15.0% |
!!! | GATTTAATGTTTTTTTCGTT+TGG | + | chr8_2:63635419-63635438 | Msa1261330:intron | 20.0% |
!!! | AGCTATCTCTATATTTTTTT+TGG | + | chr8_2:63635816-63635835 | Msa1261330:intron | 20.0% |
!!! | GCTATCTCTATATTTTTTTT+GGG | + | chr8_2:63635817-63635836 | Msa1261330:intron | 20.0% |
!!! | ATGACAATAAGATCATTTTT+AGG | + | chr8_2:63635951-63635970 | Msa1261330:intron | 20.0% |
!!! | TGACAATAAGATCATTTTTA+GGG | + | chr8_2:63635952-63635971 | Msa1261330:intron | 20.0% |
!!! | GAGTTTTAATTTTTGGTATA+TGG | + | chr8_2:63636028-63636047 | Msa1261330:intron | 20.0% |
!!! | TCAATTTTATTTTTGTTTCG+TGG | + | chr8_2:63636195-63636214 | Msa1261330:intron | 20.0% |
!! | TGTATTAAAAAATTCCAAAG+AGG | - | chr8_2:63636363-63636382 | None:intergenic | 20.0% |
!!! | CTTTGGAATTTTTTAATACA+AGG | + | chr8_2:63636363-63636382 | Msa1261330:intron | 20.0% |
!!! | TTGGAATTTTTTAATACAAG+GGG | + | chr8_2:63636365-63636384 | Msa1261330:intron | 20.0% |
!! | TCTATTTATTTGACCATTAT+TGG | + | chr8_2:63636393-63636412 | Msa1261330:intron | 20.0% |
!!! | TAAGCAATTTTTCACTTTTT+AGG | + | chr8_2:63636464-63636483 | Msa1261330:intron | 20.0% |
!! | AAGTTGCTTATAATTAAGAT+CGG | + | chr8_2:63636560-63636579 | Msa1261330:intron | 20.0% |
!!! | GTCATCATTCATATTATTTT+AGG | + | chr8_2:63637867-63637886 | Msa1261330:intron | 20.0% |
!! | GCAAAATTATAAATTGAACT+TGG | + | chr8_2:63637921-63637940 | Msa1261330:intron | 20.0% |
!! | AATGTTGAATATTTCAAGAA+TGG | - | chr8_2:63638405-63638424 | None:intergenic | 20.0% |
!! | TTATCTGCATTATATTGTAA+TGG | + | chr8_2:63638478-63638497 | Msa1261330:intron | 20.0% |
!!! | TATTGTAATGGCATAATTTT+AGG | + | chr8_2:63638490-63638509 | Msa1261330:intron | 20.0% |
!!! | TTTTCTTTACAACTCATTTT+AGG | + | chr8_2:63638527-63638546 | Msa1261330:intron | 20.0% |
!! | AAAAAATCACAATGTTGTTA+CGG | - | chr8_2:63638623-63638642 | None:intergenic | 20.0% |
!! | ATACTTTCTCATATTGATAA+AGG | + | chr8_2:63638940-63638959 | Msa1261330:intron | 20.0% |
!!! | ATCGTTCTAGTTTAATAATA+AGG | + | chr8_2:63639111-63639130 | Msa1261330:intron | 20.0% |
!! | AAGTGAAAATTACCAAAAAT+CGG | + | chr8_2:63639214-63639233 | Msa1261330:intron | 20.0% |
!!! | TATATCCATCTATGTTATTT+AGG | + | chr8_2:63639353-63639372 | Msa1261330:intron | 20.0% |
!!! | GATTAGATCTCAATTATTTT+AGG | + | chr8_2:63639417-63639436 | Msa1261330:intron | 20.0% |
!! | TTAATGGAATACAATTATAG+TGG | - | chr8_2:63639783-63639802 | None:intergenic | 20.0% |
!!! | AGAAACATAAGTTTTCAAAA+AGG | - | chr8_2:63640151-63640170 | None:intergenic | 20.0% |
!! | ATAAAGAACATTTCATTCTA+CGG | - | chr8_2:63640179-63640198 | None:intergenic | 20.0% |
!! | TAGAATGAAATGTTCTTTAT+AGG | + | chr8_2:63640179-63640198 | Msa1261330:intron | 20.0% |
!! | ATCTCTATTTAAATCCAAAT+TGG | - | chr8_2:63641119-63641138 | None:intergenic | 20.0% |
!! | CAATAAGATGTTATTAGAAA+TGG | - | chr8_2:63641201-63641220 | None:intergenic | 20.0% |
!! | TAATAAATGATTAGAAGTAG+AGG | + | chr8_2:63641387-63641406 | Msa1261330:intron | 20.0% |
!! | GAAAAACGAAAAAAATTTAC+TGG | - | chr8_2:63641508-63641527 | None:intergenic | 20.0% |
!! | TATTATCACAAGAACAAATA+AGG | - | chr8_2:63641887-63641906 | None:intergenic | 20.0% |
!! | TATTTGTTCTTGTGATAATA+AGG | + | chr8_2:63641887-63641906 | Msa1261330:CDS | 20.0% |
!! | TCAATCTATAATTGTACTTT+GGG | - | chr8_2:63641997-63642016 | None:intergenic | 20.0% |
!! | ATCAATCTATAATTGTACTT+TGG | - | chr8_2:63641998-63642017 | None:intergenic | 20.0% |
!!! | AAATTTTCCAATACTTTATC+AGG | + | chr8_2:63642030-63642049 | Msa1261330:intron | 20.0% |
!!! | AATTTTCCAATACTTTATCA+GGG | + | chr8_2:63642031-63642050 | Msa1261330:intron | 20.0% |
!!! | GATCTTAACCTATTATTTTA+GGG | - | chr8_2:63642297-63642316 | None:intergenic | 20.0% |
!!! | TGATCTTAACCTATTATTTT+AGG | - | chr8_2:63642298-63642317 | None:intergenic | 20.0% |
!! | TAAAATTGATAAATCATGGA+TGG | - | chr8_2:63642451-63642470 | None:intergenic | 20.0% |
!!! | ATCCATGATTTATCAATTTT+AGG | + | chr8_2:63642450-63642469 | Msa1261330:intron | 20.0% |
!!! | TCCATGATTTATCAATTTTA+GGG | + | chr8_2:63642451-63642470 | Msa1261330:intron | 20.0% |
!! | TCTGAACAAAAATTCATATA+CGG | - | chr8_2:63642986-63643005 | None:intergenic | 20.0% |
!!! | TTTGTTTTTAATGTTCTCGT+TGG | + | chr8_2:63635318-63635337 | Msa1261330:intron | 25.0% |
! | ATCTAACCTAGAAATTGAAA+AGG | - | chr8_2:63635464-63635483 | None:intergenic | 25.0% |
! | TTAATGCATGTTTGATATCA+CGG | + | chr8_2:63635517-63635536 | Msa1261330:intron | 25.0% |
!!! | CTCTATATTTTTTTTGGGAT+TGG | + | chr8_2:63635822-63635841 | Msa1261330:intron | 25.0% |
!!! | GACAATAAGATCATTTTTAG+GGG | + | chr8_2:63635953-63635972 | Msa1261330:intron | 25.0% |
! | TATCTTCATTCTATTTGCAT+TGG | + | chr8_2:63636286-63636305 | Msa1261330:intron | 25.0% |
!! | CATATGTTTTATGCCAATAA+TGG | - | chr8_2:63636409-63636428 | None:intergenic | 25.0% |
! | TTATTGGCATAAAACATATG+TGG | + | chr8_2:63636409-63636428 | Msa1261330:intron | 25.0% |
!! | ACATTATTTACCATTTTCTG+TGG | + | chr8_2:63636613-63636632 | Msa1261330:intron | 25.0% |
! | ATGATAGTTCCAACAAATTT+AGG | + | chr8_2:63636803-63636822 | Msa1261330:intron | 25.0% |
! | GAACAAATGTAATACCTTAA+AGG | - | chr8_2:63637069-63637088 | None:intergenic | 25.0% |
! | ATCAAAGACAAATGATTAGT+AGG | - | chr8_2:63637274-63637293 | None:intergenic | 25.0% |
! | AGATCGTTGTGAATTTATAT+GGG | - | chr8_2:63637512-63637531 | None:intergenic | 25.0% |
! | TAGAGAGTGAATATCTTTAA+AGG | - | chr8_2:63637738-63637757 | None:intergenic | 25.0% |
!!! | TCTAAGCTATTTTAAGCTAT+TGG | + | chr8_2:63637960-63637979 | Msa1261330:intron | 25.0% |
! | AAAGATTATATACCTTCAGA+GGG | - | chr8_2:63638053-63638072 | None:intergenic | 25.0% |
! | TAAAGATTATATACCTTCAG+AGG | - | chr8_2:63638054-63638073 | None:intergenic | 25.0% |
! | TTGTCAAGTAATAGTTGAAT+GGG | - | chr8_2:63638125-63638144 | None:intergenic | 25.0% |
! | TTTGTCAAGTAATAGTTGAA+TGG | - | chr8_2:63638126-63638145 | None:intergenic | 25.0% |
!! | TTCCTATTTTCCTCTTTATT+TGG | + | chr8_2:63638288-63638307 | Msa1261330:intron | 25.0% |
! | TAACATAGACTTGATTGATA+GGG | + | chr8_2:63638318-63638337 | Msa1261330:intron | 25.0% |
!!! | ATATTTATTAGCTTTGTCCT+TGG | + | chr8_2:63638846-63638865 | Msa1261330:intron | 25.0% |
! | TGCATGCATTTAATGTTATT+CGG | + | chr8_2:63639001-63639020 | Msa1261330:intron | 25.0% |
! | AAACTTTATCATAACAGTGA+AGG | + | chr8_2:63639066-63639085 | Msa1261330:intron | 25.0% |
! | AACTTTATCATAACAGTGAA+GGG | + | chr8_2:63639067-63639086 | Msa1261330:intron | 25.0% |
! | AGTTAAATCTCTATAACAGA+AGG | - | chr8_2:63639172-63639191 | None:intergenic | 25.0% |
! | ACATAGATGGATATAAGAAA+AGG | - | chr8_2:63639348-63639367 | None:intergenic | 25.0% |
! | ATTGAGATCTAATCAGAAAT+AGG | - | chr8_2:63639411-63639430 | None:intergenic | 25.0% |
!!! | ATCTCAATTATTTTAGGGAT+TGG | + | chr8_2:63639423-63639442 | Msa1261330:intron | 25.0% |
!!! | AAGGAACCATATTTTGATTA+TGG | - | chr8_2:63639609-63639628 | None:intergenic | 25.0% |
! | ATAATCAAAATATGGTTCCT+TGG | + | chr8_2:63639608-63639627 | Msa1261330:CDS | 25.0% |
! | CTTAATACAACTCAGATATA+AGG | - | chr8_2:63639753-63639772 | None:intergenic | 25.0% |
! | TCTTGAGTATACAATAATCT+AGG | + | chr8_2:63640366-63640385 | Msa1261330:intron | 25.0% |
!!! | TATTGAATTGGGATGTTTTT+TGG | - | chr8_2:63640580-63640599 | None:intergenic | 25.0% |
!! | GTGATAAAAAGGTATATTGT+GGG | + | chr8_2:63640778-63640797 | Msa1261330:intron | 25.0% |
! | ATAGTAATTATCGACCAATT+TGG | + | chr8_2:63641102-63641121 | Msa1261330:intron | 25.0% |
! | TAGAGATTGAGAAAATAATC+AGG | + | chr8_2:63641132-63641151 | Msa1261330:intron | 25.0% |
! | TAATATAAGACAGGAAAAGA+GGG | - | chr8_2:63641279-63641298 | None:intergenic | 25.0% |
! | TTAATATAAGACAGGAAAAG+AGG | - | chr8_2:63641280-63641299 | None:intergenic | 25.0% |
! | TTGTAACATTCGAATATGTA+AGG | - | chr8_2:63641530-63641549 | None:intergenic | 25.0% |
! | TTACATATTCGAATGTTACA+AGG | + | chr8_2:63641529-63641548 | Msa1261330:intron | 25.0% |
! | AGATATTGGAATATTGCAAA+TGG | + | chr8_2:63641915-63641934 | Msa1261330:CDS | 25.0% |
! | GAAAAATATAGCATCATTTG+AGG | - | chr8_2:63642245-63642264 | None:intergenic | 25.0% |
!! | TGATGCTATATTTTTCATCT+TGG | + | chr8_2:63642249-63642268 | Msa1261330:intron | 25.0% |
!!! | TAACCTATTATTTTAGGGAT+TGG | - | chr8_2:63642292-63642311 | None:intergenic | 25.0% |
! | ATGATCAAAATATTGTAGCT+AGG | - | chr8_2:63642643-63642662 | None:intergenic | 25.0% |
! | AAAGATAATGAATGTCCTAT+CGG | - | chr8_2:63642743-63642762 | None:intergenic | 25.0% |
CAAAGACAAGGTAACAAAAA+TGG | - | chr8_2:63635237-63635256 | None:intergenic | 30.0% | |
AAGAAAAAGGAACAAAGACA+AGG | - | chr8_2:63635249-63635268 | None:intergenic | 30.0% | |
! | AGTTAATGCAAGTGATTTTG+TGG | + | chr8_2:63635367-63635386 | Msa1261330:intron | 30.0% |
! | GATGTTCCTTTTCAATTTCT+AGG | + | chr8_2:63635455-63635474 | Msa1261330:intron | 30.0% |
TAGAGATAGCTAGTTAGAAA+TGG | - | chr8_2:63635807-63635826 | None:intergenic | 30.0% | |
!!! | TTTTTTTTGGGATTGGAAAC+AGG | + | chr8_2:63635829-63635848 | Msa1261330:intron | 30.0% |
! | CATACAATTGATTCTTCATG+AGG | - | chr8_2:63635878-63635897 | None:intergenic | 30.0% |
GCAAGAATATTTCATGATGA+AGG | + | chr8_2:63635903-63635922 | Msa1261330:CDS | 30.0% | |
TTTGGTATATGGTGTAGTTA+TGG | + | chr8_2:63636039-63636058 | Msa1261330:intron | 30.0% | |
!! | TGTTTTCTGGGAATTGTTTA+TGG | + | chr8_2:63636096-63636115 | Msa1261330:CDS | 30.0% |
AAGTACGCATATAATCGAAA+AGG | - | chr8_2:63636242-63636261 | None:intergenic | 30.0% | |
ATTCTATTTGCATTGGACAA+TGG | + | chr8_2:63636293-63636312 | Msa1261330:intron | 30.0% | |
TTTACTATTCTTACTTGCCT+CGG | + | chr8_2:63636432-63636451 | Msa1261330:intron | 30.0% | |
TGCTTATAATTAAGATCGGA+TGG | + | chr8_2:63636564-63636583 | Msa1261330:intron | 30.0% | |
TAGTATGTAGTATAGACCAT+AGG | + | chr8_2:63636748-63636767 | Msa1261330:intron | 30.0% | |
AGCAAATAATTTACGACCTA+TGG | - | chr8_2:63636767-63636786 | None:intergenic | 30.0% | |
TTTCTTGAGCCTAAATTTGT+TGG | - | chr8_2:63636815-63636834 | None:intergenic | 30.0% | |
AAATTTAGGCTCAAGAAATG+CGG | + | chr8_2:63636817-63636836 | Msa1261330:intron | 30.0% | |
AATGGCAACAAAACTAAATG+AGG | + | chr8_2:63636998-63637017 | Msa1261330:CDS | 30.0% | |
!! | TGATGATGCTTATCACATTT+TGG | + | chr8_2:63637326-63637345 | Msa1261330:intron | 30.0% |
! | GATGATGCTTATCACATTTT+GGG | + | chr8_2:63637327-63637346 | Msa1261330:intron | 30.0% |
TTCTATTTGCAGACAAACAT+TGG | + | chr8_2:63637371-63637390 | Msa1261330:intron | 30.0% | |
TTTACAAGAGAAACTTCAAC+AGG | + | chr8_2:63637410-63637429 | Msa1261330:CDS | 30.0% | |
ATCGTTGTGAATTTATATGG+GGG | - | chr8_2:63637510-63637529 | None:intergenic | 30.0% | |
GATCGTTGTGAATTTATATG+GGG | - | chr8_2:63637511-63637530 | None:intergenic | 30.0% | |
CAGATCGTTGTGAATTTATA+TGG | - | chr8_2:63637513-63637532 | None:intergenic | 30.0% | |
CACTCTCTATTATTGTAAAC+TGG | + | chr8_2:63637749-63637768 | Msa1261330:intron | 30.0% | |
! | CTAATTTTCAGTCCCTTTTT+TGG | + | chr8_2:63637794-63637813 | Msa1261330:intron | 30.0% |
AGCATACACTTTCCAAAAAA+GGG | - | chr8_2:63637809-63637828 | None:intergenic | 30.0% | |
TAGCATACACTTTCCAAAAA+AGG | - | chr8_2:63637810-63637829 | None:intergenic | 30.0% | |
ATACGATAAGAGTTCAAATC+TGG | - | chr8_2:63638013-63638032 | None:intergenic | 30.0% | |
ATAAGAAAAATTCCCTCTGA+AGG | + | chr8_2:63638038-63638057 | Msa1261330:intron | 30.0% | |
ATGAACTCACAAATAGTTTG+AGG | + | chr8_2:63638087-63638106 | Msa1261330:intron | 30.0% | |
AGCCAAATAAAGAGGAAAAT+AGG | - | chr8_2:63638293-63638312 | None:intergenic | 30.0% | |
CTATCAATCAAGTCTATGTT+AGG | - | chr8_2:63638319-63638338 | None:intergenic | 30.0% | |
CTAACATAGACTTGATTGAT+AGG | + | chr8_2:63638317-63638336 | Msa1261330:intron | 30.0% | |
ATATTCAACATTCCTTGCTT+TGG | + | chr8_2:63638413-63638432 | Msa1261330:intron | 30.0% | |
!!! | CTCATTTTAGGTTCAAATCA+AGG | + | chr8_2:63638539-63638558 | Msa1261330:intron | 30.0% |
!!! | ATTTTAGGTTCAAATCAAGG+TGG | + | chr8_2:63638542-63638561 | Msa1261330:intron | 30.0% |
! | TTTTCTTTCTTTCTTCCTGT+TGG | + | chr8_2:63638641-63638660 | Msa1261330:intron | 30.0% |
CTAAATTCAAAGTAGAAAGC+TGG | + | chr8_2:63638710-63638729 | Msa1261330:intron | 30.0% | |
AGTAGAAAGCTGGATATATT+AGG | + | chr8_2:63638720-63638739 | Msa1261330:intron | 30.0% | |
GTAGAAAGCTGGATATATTA+GGG | + | chr8_2:63638721-63638740 | Msa1261330:intron | 30.0% | |
!! | TTCATATCACAACCGATTTT+TGG | - | chr8_2:63639229-63639248 | None:intergenic | 30.0% |
ATGCACCTAAATAACATAGA+TGG | - | chr8_2:63639361-63639380 | None:intergenic | 30.0% | |
AATTGATTGGAAGATTGTGA+AGG | - | chr8_2:63639493-63639512 | None:intergenic | 30.0% | |
TTAGTTAATCCATTTGTCAG+TGG | + | chr8_2:63639553-63639572 | Msa1261330:CDS | 30.0% | |
GCTTGTCCATAATCAAAATA+TGG | + | chr8_2:63639600-63639619 | Msa1261330:CDS | 30.0% | |
ATACAACTCAGATATAAGGT+TGG | - | chr8_2:63639749-63639768 | None:intergenic | 30.0% | |
ATGGAATACAATTATAGTGG+TGG | - | chr8_2:63639780-63639799 | None:intergenic | 30.0% | |
ATTGCTCATAGGAAACTTAA+TGG | - | chr8_2:63639799-63639818 | None:intergenic | 30.0% | |
GTTTCCTATGAGCAATATTT+AGG | + | chr8_2:63639803-63639822 | Msa1261330:intron | 30.0% | |
AAAGGAAATTGTGCAATGTT+AGG | - | chr8_2:63640133-63640152 | None:intergenic | 30.0% | |
!!! | AAGATTTCCTTGTTTTCTAG+GGG | - | chr8_2:63640259-63640278 | None:intergenic | 30.0% |
!!! | CAAGATTTCCTTGTTTTCTA+GGG | - | chr8_2:63640260-63640279 | None:intergenic | 30.0% |
!!! | TCAAGATTTCCTTGTTTTCT+AGG | - | chr8_2:63640261-63640280 | None:intergenic | 30.0% |
TCATCACTCCATTAATATAG+TGG | + | chr8_2:63640331-63640350 | Msa1261330:intron | 30.0% | |
TTACGTGTCCACTATATTAA+TGG | - | chr8_2:63640342-63640361 | None:intergenic | 30.0% | |
! | ACCTCAAGGTAATTGTTATT+TGG | + | chr8_2:63640409-63640428 | Msa1261330:intron | 30.0% |
CTATCAGATTTATCATACCT+TGG | - | chr8_2:63640527-63640546 | None:intergenic | 30.0% | |
!!! | AATTGGGATGTTTTTTGGAA+GGG | - | chr8_2:63640575-63640594 | None:intergenic | 30.0% |
TGGAATTCTATATGGCTATA+TGG | + | chr8_2:63640613-63640632 | Msa1261330:intron | 30.0% | |
CATACGGTTTCAAATTTGAA+TGG | + | chr8_2:63640641-63640660 | Msa1261330:intron | 30.0% | |
TCATTTAATGAGATCAAGCA+TGG | + | chr8_2:63640684-63640703 | Msa1261330:CDS | 30.0% | |
! | GATGGAAAACTATTTGTTAC+TGG | + | chr8_2:63640750-63640769 | Msa1261330:CDS | 30.0% |
! | CGTGATAAAAAGGTATATTG+TGG | + | chr8_2:63640777-63640796 | Msa1261330:intron | 30.0% |
!! | CCAAACCTTTACAGTTTTAT+CGG | - | chr8_2:63641034-63641053 | None:intergenic | 30.0% |
CGATAAAACTGTAAAGGTTT+GGG | + | chr8_2:63641032-63641051 | Msa1261330:CDS | 30.0% | |
! | GAAATGGGATATAGTTTTCA+CGG | - | chr8_2:63641185-63641204 | None:intergenic | 30.0% |
CAAAAGGTAAATGACAAAGA+GGG | - | chr8_2:63641244-63641263 | None:intergenic | 30.0% | |
ACAAAAGGTAAATGACAAAG+AGG | - | chr8_2:63641245-63641264 | None:intergenic | 30.0% | |
AGGATATATGTCAAAGATAG+AGG | + | chr8_2:63641407-63641426 | Msa1261330:intron | 30.0% | |
GGATATATGTCAAAGATAGA+GGG | + | chr8_2:63641408-63641427 | Msa1261330:intron | 30.0% | |
GATATATGTCAAAGATAGAG+GGG | + | chr8_2:63641409-63641428 | Msa1261330:intron | 30.0% | |
! | ATTAAATCTAAAGCAGATCC+AGG | - | chr8_2:63641648-63641667 | None:intergenic | 30.0% |
ATTGCAAATGGTAGTTGTAT+TGG | + | chr8_2:63641927-63641946 | Msa1261330:CDS | 30.0% | |
TTGCAAATGGTAGTTGTATT+GGG | + | chr8_2:63641928-63641947 | Msa1261330:CDS | 30.0% | |
! | TAGTTGTATTGGGATTTTCA+AGG | + | chr8_2:63641938-63641957 | Msa1261330:CDS | 30.0% |
CTACCAATCCCTAAAATAAT+AGG | + | chr8_2:63642286-63642305 | Msa1261330:intron | 30.0% | |
ATAGAGAAAGATGACATTGA+TGG | - | chr8_2:63642388-63642407 | None:intergenic | 30.0% | |
GCCCTAAAATTGATAAATCA+TGG | - | chr8_2:63642455-63642474 | None:intergenic | 30.0% | |
TAATGATCTGGTTAAACTCT+GGG | + | chr8_2:63642537-63642556 | Msa1261330:CDS | 30.0% | |
TCAAAATATTGTAGCTAGGA+TGG | - | chr8_2:63642639-63642658 | None:intergenic | 30.0% | |
TAATATAGGTTTACTCCTTC+AGG | + | chr8_2:63642937-63642956 | Msa1261330:three_prime_UTR | 30.0% | |
! | TTTTGCCAATGTAAGTAATG+CGG | + | chr8_2:63643058-63643077 | Msa1261330:three_prime_UTR | 30.0% |
! | TAATGCGGTTTTCTTACATT+TGG | + | chr8_2:63643073-63643092 | Msa1261330:three_prime_UTR | 30.0% |
! | AATGCGGTTTTCTTACATTT+GGG | + | chr8_2:63643074-63643093 | Msa1261330:three_prime_UTR | 30.0% |
TTTATCAGGTTCATCGCATT+TGG | - | chr8_2:63635189-63635208 | None:intergenic | 35.0% | |
GAAACTGTGTACGAAGAAAA+AGG | - | chr8_2:63635262-63635281 | None:intergenic | 35.0% | |
TCAGAGTATGTTTGGTATCA+CGG | - | chr8_2:63635578-63635597 | None:intergenic | 35.0% | |
GGCAATGTTGAACAGAATAT+TGG | + | chr8_2:63635924-63635943 | Msa1261330:CDS | 35.0% | |
GAATTGTTTATGGCCAAACA+AGG | + | chr8_2:63636106-63636125 | Msa1261330:CDS | 35.0% | |
TGAGAGTGAAAAACCTTGTT+TGG | - | chr8_2:63636122-63636141 | None:intergenic | 35.0% | |
ACCAGCATTATCTTACCTTA+AGG | + | chr8_2:63636144-63636163 | Msa1261330:CDS | 35.0% | |
ACCTTAAGGTAAGATAATGC+TGG | - | chr8_2:63636148-63636167 | None:intergenic | 35.0% | |
CGCATATAATCGAAAAGGTA+TGG | - | chr8_2:63636237-63636256 | None:intergenic | 35.0% | |
GTGCAATGTAAGAATACAAG+CGG | - | chr8_2:63636341-63636360 | None:intergenic | 35.0% | |
ATTCTTACATTGCACCTCTT+TGG | + | chr8_2:63636346-63636365 | Msa1261330:intron | 35.0% | |
ATTGCTTATAATTGAGACCG+AGG | - | chr8_2:63636452-63636471 | None:intergenic | 35.0% | |
CATCATAGAACCACAGAAAA+TGG | - | chr8_2:63636626-63636645 | None:intergenic | 35.0% | |
!! | ACTTCTGATTTTGACAGTGA+CGG | - | chr8_2:63636687-63636706 | None:intergenic | 35.0% |
!! | ACCATAGGAGCATTGTTTAT+GGG | - | chr8_2:63636951-63636970 | None:intergenic | 35.0% |
CCATTGTATTAGAAGTAACC+CGG | - | chr8_2:63636983-63637002 | None:intergenic | 35.0% | |
CAACAAAACTAAATGAGGAC+AGG | + | chr8_2:63637003-63637022 | Msa1261330:CDS | 35.0% | |
!! | ATCAAAAGCATTTCCCTGAA+GGG | - | chr8_2:63637039-63637058 | None:intergenic | 35.0% |
!! | TTTTGATGACAGGACCTTTA+AGG | + | chr8_2:63637052-63637071 | Msa1261330:CDS | 35.0% |
ATAATGAATGCTTATACCCG+CGG | + | chr8_2:63637173-63637192 | Msa1261330:CDS | 35.0% | |
!! | TGCTATTTCGTTCAACAACA+AGG | - | chr8_2:63637222-63637241 | None:intergenic | 35.0% |
TTGTAAAATGCTAAGTGCAC+TGG | - | chr8_2:63637397-63637416 | None:intergenic | 35.0% | |
TTTACGATTACTTGTAACCC+TGG | - | chr8_2:63637459-63637478 | None:intergenic | 35.0% | |
!! | ACCATCTTTTGTTCTGAATC+AGG | + | chr8_2:63637541-63637560 | Msa1261330:intron | 35.0% |
AGTACCATGAACACTGTAAA+TGG | - | chr8_2:63637624-63637643 | None:intergenic | 35.0% | |
CTAACAAGAAAACGTGAACT+AGG | - | chr8_2:63637679-63637698 | None:intergenic | 35.0% | |
TAGTCTTTCAATAGCAGACT+CGG | + | chr8_2:63637696-63637715 | Msa1261330:intron | 35.0% | |
! | AGACTCGGTATGTTCAATAA+GGG | + | chr8_2:63637711-63637730 | Msa1261330:intron | 35.0% |
!! | TTTTGGAAAGTGTATGCTAC+TGG | + | chr8_2:63637811-63637830 | Msa1261330:intron | 35.0% |
!! | ATTTGTTGTTGTTGCCTGAA+AGG | + | chr8_2:63637838-63637857 | Msa1261330:intron | 35.0% |
TAAGAGTTCAAATCTGGTTG+CGG | - | chr8_2:63638007-63638026 | None:intergenic | 35.0% | |
TCAAGTAATAGTTGAATGGG+AGG | - | chr8_2:63638122-63638141 | None:intergenic | 35.0% | |
GGGAGTCTCAGTTTATTAAT+CGG | - | chr8_2:63638174-63638193 | None:intergenic | 35.0% | |
TAGTTAGTTAGGAGGTAGTT+AGG | - | chr8_2:63638218-63638237 | None:intergenic | 35.0% | |
ATGTATCTGTCATAGTTGTC+AGG | - | chr8_2:63638264-63638283 | None:intergenic | 35.0% | |
TTAGGAGAAGCCAAATAAAG+AGG | - | chr8_2:63638301-63638320 | None:intergenic | 35.0% | |
CCAGTTAAGGTAATAGAACA+AGG | - | chr8_2:63638349-63638368 | None:intergenic | 35.0% | |
CCTTGTTCTATTACCTTAAC+TGG | + | chr8_2:63638346-63638365 | Msa1261330:intron | 35.0% | |
AAGCTGACATAATCCAGTTA+AGG | - | chr8_2:63638362-63638381 | None:intergenic | 35.0% | |
GCTGGATATATTAGGGAAAA+TGG | + | chr8_2:63638728-63638747 | Msa1261330:intron | 35.0% | |
! | TTGTCCTTGGATGCATTTTA+AGG | + | chr8_2:63638859-63638878 | Msa1261330:intron | 35.0% |
TCAACCTTAAAATGCATCCA+AGG | - | chr8_2:63638866-63638885 | None:intergenic | 35.0% | |
AATAAGGAAGTCTCTCTACT+TGG | + | chr8_2:63639127-63639146 | Msa1261330:intron | 35.0% | |
TCGGTTGTGATATGAAATCA+TGG | + | chr8_2:63639233-63639252 | Msa1261330:intron | 35.0% | |
! | CTTCCAATCAATTTTCACCA+TGG | + | chr8_2:63639500-63639519 | Msa1261330:CDS | 35.0% |
TGATTATGGACAAGCAAACT+TGG | - | chr8_2:63639595-63639614 | None:intergenic | 35.0% | |
AACCACCTACAGAATTTGAT+TGG | - | chr8_2:63639642-63639661 | None:intergenic | 35.0% | |
! | AGGTGTTACAATATTGGGAA+TGG | - | chr8_2:63639665-63639684 | None:intergenic | 35.0% |
! | TGTGCAGGTGTTACAATATT+GGG | - | chr8_2:63639670-63639689 | None:intergenic | 35.0% |
! | TTGTGCAGGTGTTACAATAT+TGG | - | chr8_2:63639671-63639690 | None:intergenic | 35.0% |
ATTGTAACACCTGCACAAAT+TGG | + | chr8_2:63639673-63639692 | Msa1261330:CDS | 35.0% | |
! | AAGGTTGGTTGATACCTTAT+GGG | - | chr8_2:63639734-63639753 | None:intergenic | 35.0% |
! | TAAGGTTGGTTGATACCTTA+TGG | - | chr8_2:63639735-63639754 | None:intergenic | 35.0% |
AGCTCCTAAATATTGCTCAT+AGG | - | chr8_2:63639810-63639829 | None:intergenic | 35.0% | |
! | TGAGTGTGTGTCTGAATTTT+AGG | + | chr8_2:63639854-63639873 | Msa1261330:intron | 35.0% |
!! | CTACTTTTCGTTTTTGCTTC+CGG | - | chr8_2:63639899-63639918 | None:intergenic | 35.0% |
TGCATCAACACAGAATCAAT+TGG | + | chr8_2:63640046-63640065 | Msa1261330:CDS | 35.0% | |
GAAATTGTGCAATGTTAGGA+TGG | - | chr8_2:63640129-63640148 | None:intergenic | 35.0% | |
!!! | AGATTTCCTTGTTTTCTAGG+GGG | - | chr8_2:63640258-63640277 | None:intergenic | 35.0% |
!!! | TGAGGTCAAGTAGTTTTTTC+AGG | - | chr8_2:63640395-63640414 | None:intergenic | 35.0% |
GAAAAAACTACTTGACCTCA+AGG | + | chr8_2:63640395-63640414 | Msa1261330:intron | 35.0% | |
GCCAAATAACAATTACCTTG+AGG | - | chr8_2:63640413-63640432 | None:intergenic | 35.0% | |
!! | CAAGGTAATTGTTATTTGGC+AGG | + | chr8_2:63640413-63640432 | Msa1261330:intron | 35.0% |
!!! | ATTGGGATGTTTTTTGGAAG+GGG | - | chr8_2:63640574-63640593 | None:intergenic | 35.0% |
!!! | GAATTGGGATGTTTTTTGGA+AGG | - | chr8_2:63640576-63640595 | None:intergenic | 35.0% |
! | CCATCAAGTGCTATTGAATT+GGG | - | chr8_2:63640591-63640610 | None:intergenic | 35.0% |
! | TCCATCAAGTGCTATTGAAT+TGG | - | chr8_2:63640592-63640611 | None:intergenic | 35.0% |
!! | TGATGGACTGGAATTCTATA+TGG | + | chr8_2:63640605-63640624 | Msa1261330:intron | 35.0% |
! | TGGCTATATGGAAAAGCATA+CGG | + | chr8_2:63640625-63640644 | Msa1261330:intron | 35.0% |
!! | TGAATGGTCTGCTTTTCATT+AGG | + | chr8_2:63640657-63640676 | Msa1261330:intron | 35.0% |
TAATGAGATCAAGCATGGAT+TGG | + | chr8_2:63640689-63640708 | Msa1261330:CDS | 35.0% | |
! | AACAAATAGTTTTCCATCCG+AGG | - | chr8_2:63640748-63640767 | None:intergenic | 35.0% |
! | GGAAAACTATTTGTTACTGG+TGG | + | chr8_2:63640753-63640772 | Msa1261330:CDS | 35.0% |
GTTAATCTGCTATGAGATTC+AGG | + | chr8_2:63640894-63640913 | Msa1261330:intron | 35.0% | |
TAGCAACATAGAACATGCTT+GGG | - | chr8_2:63641002-63641021 | None:intergenic | 35.0% | |
CCGATAAAACTGTAAAGGTT+TGG | + | chr8_2:63641031-63641050 | Msa1261330:CDS | 35.0% | |
AGGGTTGTAGAAGAAACAAA+AGG | - | chr8_2:63641260-63641279 | None:intergenic | 35.0% | |
!! | TACAGGTTGATTATTAGCAG+AGG | - | chr8_2:63641444-63641463 | None:intergenic | 35.0% |
GCTAATAATCAACCTGTAGT+TGG | + | chr8_2:63641446-63641465 | Msa1261330:intron | 35.0% | |
AGCAAACAGCATGAATGTAA+GGG | - | chr8_2:63641483-63641502 | None:intergenic | 35.0% | |
TAGCAAACAGCATGAATGTA+AGG | - | chr8_2:63641484-63641503 | None:intergenic | 35.0% | |
! | AGTGGCAAAGTTGATTATGT+TGG | + | chr8_2:63641586-63641605 | Msa1261330:intron | 35.0% |
! | TTTTATTACACTTTGCAGCC+TGG | + | chr8_2:63641792-63641811 | Msa1261330:intron | 35.0% |
ATTCTCTTCGGACATTTACA+GGG | + | chr8_2:63641817-63641836 | Msa1261330:CDS | 35.0% | |
TTTCCAATACTTTATCAGGG+TGG | + | chr8_2:63642034-63642053 | Msa1261330:intron | 35.0% | |
GAGTTGCAGATTTAAATTGC+AGG | + | chr8_2:63642147-63642166 | Msa1261330:CDS | 35.0% | |
! | GACATTGATGGATAACACTT+TGG | - | chr8_2:63642376-63642395 | None:intergenic | 35.0% |
TTGATAAATCATGGATGGTC+AGG | - | chr8_2:63642446-63642465 | None:intergenic | 35.0% | |
GTAATGATCTGGTTAAACTC+TGG | + | chr8_2:63642536-63642555 | Msa1261330:CDS | 35.0% | |
!! | AATACACACTCTTTTGACTC+TGG | + | chr8_2:63642716-63642735 | Msa1261330:intron | 35.0% |
AGTATCAGATGTTACTGGAT+TGG | + | chr8_2:63642853-63642872 | Msa1261330:CDS | 35.0% | |
ATGATAGGACTTTCAAGATC+TGG | + | chr8_2:63642891-63642910 | Msa1261330:CDS | 35.0% | |
!! | GCACTTGCTGTTGATAATAT+AGG | + | chr8_2:63642923-63642942 | Msa1261330:three_prime_UTR | 35.0% |
! | GTTCAGACTTGCTCATATAT+AGG | + | chr8_2:63642999-63643018 | Msa1261330:three_prime_UTR | 35.0% |
CTTATGCTACAAGCAGTAAA+TGG | + | chr8_2:63643023-63643042 | Msa1261330:three_prime_UTR | 35.0% | |
! | AAGCAGTAAATGGCATGTTT+TGG | + | chr8_2:63643033-63643052 | Msa1261330:three_prime_UTR | 35.0% |
GAAAACCGCATTACTTACAT+TGG | - | chr8_2:63643066-63643085 | None:intergenic | 35.0% | |
GCGATTTCATACGCTTTATC+AGG | - | chr8_2:63635203-63635222 | None:intergenic | 40.0% | |
ATGCATGTTTGATATCACGG+TGG | + | chr8_2:63635520-63635539 | Msa1261330:intron | 40.0% | |
ACACTTGACACACGTGATTA+CGG | + | chr8_2:63635629-63635648 | Msa1261330:intron | 40.0% | |
! | TCGAAAAGGTATGGACACAA+AGG | - | chr8_2:63636228-63636247 | None:intergenic | 40.0% |
GCGGTATATATGCTTAACCT+TGG | - | chr8_2:63636322-63636341 | None:intergenic | 40.0% | |
TTTGACAGTGACGGTATCTT+AGG | - | chr8_2:63636678-63636697 | None:intergenic | 40.0% | |
GTTTATGGGACAGAGAACAT+TGG | - | chr8_2:63636937-63636956 | None:intergenic | 40.0% | |
TCCCATAAACAATGCTCCTA+TGG | + | chr8_2:63636947-63636966 | Msa1261330:CDS | 40.0% | |
!! | CACCATAGGAGCATTGTTTA+TGG | - | chr8_2:63636952-63636971 | None:intergenic | 40.0% |
TAAACAATGCTCCTATGGTG+AGG | + | chr8_2:63636952-63636971 | Msa1261330:CDS | 40.0% | |
CCGGGTTACTTCTAATACAA+TGG | + | chr8_2:63636980-63636999 | Msa1261330:CDS | 40.0% | |
!! | TCAAAAGCATTTCCCTGAAG+GGG | - | chr8_2:63637038-63637057 | None:intergenic | 40.0% |
!! | CATCAAAAGCATTTCCCTGA+AGG | - | chr8_2:63637040-63637059 | None:intergenic | 40.0% |
!! | AGGGAAATGCTTTTGATGAC+AGG | + | chr8_2:63637042-63637061 | Msa1261330:CDS | 40.0% |
AACGAAATAGCACCAAGAAC+TGG | + | chr8_2:63637230-63637249 | Msa1261330:CDS | 40.0% | |
AATCAAAACCAGCAACTTCC+AGG | + | chr8_2:63637438-63637457 | Msa1261330:CDS | 40.0% | |
ATCAAAACCAGCAACTTCCA+GGG | + | chr8_2:63637439-63637458 | Msa1261330:CDS | 40.0% | |
GCCTGATTCAGAACAAAAGA+TGG | - | chr8_2:63637545-63637564 | None:intergenic | 40.0% | |
!! | TCTCAAGCTGTTGTTTCAGA+AGG | + | chr8_2:63637596-63637615 | Msa1261330:CDS | 40.0% |
GGATCCATTTACAGTGTTCA+TGG | + | chr8_2:63637617-63637636 | Msa1261330:CDS | 40.0% | |
! | CAGACTCGGTATGTTCAATA+AGG | + | chr8_2:63637710-63637729 | Msa1261330:intron | 40.0% |
ATGATGACTTTCAGCCTTTC+AGG | - | chr8_2:63637855-63637874 | None:intergenic | 40.0% | |
TTAGTTAGGAGGTAGTTAGG+AGG | - | chr8_2:63638215-63638234 | None:intergenic | 40.0% | |
ACTGACAGTAGTTAGTTAGG+AGG | - | chr8_2:63638226-63638245 | None:intergenic | 40.0% | |
CAGACTGACAGTAGTTAGTT+AGG | - | chr8_2:63638229-63638248 | None:intergenic | 40.0% | |
AGCCAAAGTCTTACTGCTAA+AGG | - | chr8_2:63638593-63638612 | None:intergenic | 40.0% | |
TGAACCATGAGAGATAGACT+GGG | - | chr8_2:63638682-63638701 | None:intergenic | 40.0% | |
ATGAACCATGAGAGATAGAC+TGG | - | chr8_2:63638683-63638702 | None:intergenic | 40.0% | |
TTAGGGAAAATGGCATTCAG+TGG | + | chr8_2:63638738-63638757 | Msa1261330:intron | 40.0% | |
AGAACGATGATCAATCAGAC+AGG | - | chr8_2:63639099-63639118 | None:intergenic | 40.0% | |
CTTCCTCACAGCTGAATTTA+AGG | - | chr8_2:63639285-63639304 | None:intergenic | 40.0% | |
AAATAGGATTGCTCACACAG+TGG | - | chr8_2:63639395-63639414 | None:intergenic | 40.0% | |
CTGCCATGGTGAAAATTGAT+TGG | - | chr8_2:63639506-63639525 | None:intergenic | 40.0% | |
TGAAACATAAGTTGCTGCCA+TGG | - | chr8_2:63639520-63639539 | None:intergenic | 40.0% | |
ATGGCAGCAACTTATGTTTC+AGG | + | chr8_2:63639519-63639538 | Msa1261330:CDS | 40.0% | |
CCATCAAAACCACTGACAAA+TGG | - | chr8_2:63639565-63639584 | None:intergenic | 40.0% | |
!!! | CCATTTGTCAGTGGTTTTGA+TGG | + | chr8_2:63639562-63639581 | Msa1261330:CDS | 40.0% |
AATATGGTTCCTTGGAACGA+TGG | + | chr8_2:63639616-63639635 | Msa1261330:CDS | 40.0% | |
GATGGCCAATCAAATTCTGT+AGG | + | chr8_2:63639634-63639653 | Msa1261330:CDS | 40.0% | |
GTCATATCTAAGTCCAGATG+AGG | - | chr8_2:63639712-63639731 | None:intergenic | 40.0% | |
GGACTTAGATATGACCCATA+AGG | + | chr8_2:63639717-63639736 | Msa1261330:CDS | 40.0% | |
!! | CTTCCAAAAGTCAAGTTGAC+CGG | + | chr8_2:63639877-63639896 | Msa1261330:CDS | 40.0% |
CGGAAGCAAAAACGAAAAGT+AGG | + | chr8_2:63639897-63639916 | Msa1261330:CDS | 40.0% | |
CGAAAAGTAGGATCAAGTTC+AGG | + | chr8_2:63639909-63639928 | Msa1261330:CDS | 40.0% | |
! | TCTGGAACTGCAAACACAAT+GGG | + | chr8_2:63639945-63639964 | Msa1261330:CDS | 40.0% |
AACACAATGGGATCATCTTC+TGG | + | chr8_2:63639957-63639976 | Msa1261330:CDS | 40.0% | |
ATACCATTCTGTTGCCAAGT+TGG | - | chr8_2:63640017-63640036 | None:intergenic | 40.0% | |
ACTTGGCAACAGAATGGTAT+CGG | + | chr8_2:63640017-63640036 | Msa1261330:CDS | 40.0% | |
AATGTTAGGATGGCACAATC+AGG | - | chr8_2:63640119-63640138 | None:intergenic | 40.0% | |
!!! | ATTTCCTTGTTTTCTAGGGG+GGG | - | chr8_2:63640256-63640275 | None:intergenic | 40.0% |
!!! | GATTTCCTTGTTTTCTAGGG+GGG | - | chr8_2:63640257-63640276 | None:intergenic | 40.0% |
! | TGTTATTTGGCAGGCTCATA+TGG | + | chr8_2:63640422-63640441 | Msa1261330:intron | 40.0% |
AAGATCTGTTGCTCTTGAGA+TGG | - | chr8_2:63640449-63640468 | None:intergenic | 40.0% | |
TCTCAAGAGCAACAGATCTT+TGG | + | chr8_2:63640449-63640468 | Msa1261330:CDS | 40.0% | |
!! | TCATCTCTTGCTGATTCAGA+TGG | + | chr8_2:63640492-63640511 | Msa1261330:CDS | 40.0% |
!!! | ATGTTTTTTGGAAGGGGGAA+GGG | - | chr8_2:63640568-63640587 | None:intergenic | 40.0% |
!!! | TTGGGATGTTTTTTGGAAGG+GGG | - | chr8_2:63640573-63640592 | None:intergenic | 40.0% |
CCCAATTCAATAGCACTTGA+TGG | + | chr8_2:63640588-63640607 | Msa1261330:intron | 40.0% | |
! | TTCAATAGCACTTGATGGAC+TGG | + | chr8_2:63640593-63640612 | Msa1261330:intron | 40.0% |
TACTGGTGGTCGTGATAAAA+AGG | + | chr8_2:63640767-63640786 | Msa1261330:CDS | 40.0% | |
ATGAGATTCAGGCTTCTCTA+TGG | + | chr8_2:63640905-63640924 | Msa1261330:intron | 40.0% | |
GTAGCAACATAGAACATGCT+TGG | - | chr8_2:63641003-63641022 | None:intergenic | 40.0% | |
!! | CTTTACAGTTTTATCGGCTG+AGG | - | chr8_2:63641028-63641047 | None:intergenic | 40.0% |
CTCAGCCGATAAAACTGTAA+AGG | + | chr8_2:63641026-63641045 | Msa1261330:CDS | 40.0% | |
GAAATGCAAGAACCAACTAC+AGG | - | chr8_2:63641461-63641480 | None:intergenic | 40.0% | |
GCATCAGTTATGCAACTAAG+TGG | + | chr8_2:63641568-63641587 | Msa1261330:intron | 40.0% | |
!! | ACTAGCTTTAAAAGACCTCC+TGG | + | chr8_2:63641627-63641646 | Msa1261330:intron | 40.0% |
! | AAATCTAAAGCAGATCCAGG+AGG | - | chr8_2:63641645-63641664 | None:intergenic | 40.0% |
CATTCTCTTCGGACATTTAC+AGG | + | chr8_2:63641816-63641835 | Msa1261330:CDS | 40.0% | |
GACTTTCATCCAAGTAAACG+TGG | + | chr8_2:63641861-63641880 | Msa1261330:CDS | 40.0% | |
CAAATAAGGCCACGTTTACT+TGG | - | chr8_2:63641873-63641892 | None:intergenic | 40.0% | |
ACACCACCCTGATAAAGTAT+TGG | - | chr8_2:63642040-63642059 | None:intergenic | 40.0% | |
GTGAGATTTCAACCTGGTTT+GGG | + | chr8_2:63642067-63642086 | Msa1261330:CDS | 40.0% | |
!! | ATTTCAACCTGGTTTGGGAA+AGG | + | chr8_2:63642072-63642091 | Msa1261330:CDS | 40.0% |
! | GATGGATAACACTTTGGTGT+TGG | - | chr8_2:63642370-63642389 | None:intergenic | 40.0% |
! | GCACTCTTCTGGAAATTATC+TGG | + | chr8_2:63642504-63642523 | Msa1261330:CDS | 40.0% |
GGCATCTGTTTGTAATGATC+TGG | + | chr8_2:63642525-63642544 | Msa1261330:CDS | 40.0% | |
! | TTTGATCATTTGCTGCAGTG+AGG | + | chr8_2:63642654-63642673 | Msa1261330:CDS | 40.0% |
TAATTCAGTCGCTTATGCTC+TGG | + | chr8_2:63642768-63642787 | Msa1261330:intron | 40.0% | |
AATTCAGTCGCTTATGCTCT+GGG | + | chr8_2:63642769-63642788 | Msa1261330:intron | 40.0% | |
TTGGCAGTATCAGATGTTAC+TGG | + | chr8_2:63642848-63642867 | Msa1261330:CDS | 40.0% | |
! | ATCAGATGTTACTGGATTGG+TGG | + | chr8_2:63642856-63642875 | Msa1261330:CDS | 40.0% |
TGGCTTCAGTTAGTCATGAT+AGG | + | chr8_2:63642876-63642895 | Msa1261330:CDS | 40.0% | |
! | TTCCTATGTTTGTTGCCTGA+AGG | - | chr8_2:63642955-63642974 | None:intergenic | 40.0% |
CACGTGCTTCAGAGTATGTT+TGG | - | chr8_2:63635586-63635605 | None:intergenic | 45.0% | |
!! | ACATACTCTGAAGCACGTGT+CGG | + | chr8_2:63635587-63635606 | Msa1261330:intron | 45.0% |
GTGTGTCAAGTGTGTTGTGT+CGG | - | chr8_2:63635622-63635641 | None:intergenic | 45.0% | |
ACCGTGATACCAACATGTGT+CGG | + | chr8_2:63635675-63635694 | Msa1261330:intron | 45.0% | |
ACCGACACATGTTGGTATCA+CGG | - | chr8_2:63635679-63635698 | None:intergenic | 45.0% | |
AATGGGACAAACGCACCTTA+AGG | - | chr8_2:63636162-63636181 | None:intergenic | 45.0% | |
TATGGGGCTGAAACTCAAGA+AGG | + | chr8_2:63636903-63636922 | Msa1261330:CDS | 45.0% | |
AACAAGGCACAATCCTCGTT+TGG | - | chr8_2:63637206-63637225 | None:intergenic | 45.0% | |
GAAATAGCACCAAGAACTGG+TGG | + | chr8_2:63637233-63637252 | Msa1261330:CDS | 45.0% | |
ATGATTAGTAGGCACCCTGA+AGG | - | chr8_2:63637263-63637282 | None:intergenic | 45.0% | |
GGAGGGAAAAGTTGTTGCAA+GGG | - | chr8_2:63638194-63638213 | None:intergenic | 45.0% | |
AGGAGGGAAAAGTTGTTGCA+AGG | - | chr8_2:63638195-63638214 | None:intergenic | 45.0% | |
TTAGGAGGTAGTTAGGAGGA+GGG | - | chr8_2:63638211-63638230 | None:intergenic | 45.0% | |
AGCAAGTATGCACCAAAGCA+AGG | - | chr8_2:63638428-63638447 | None:intergenic | 45.0% | |
! | GTAGCGACTTGACTCTGAAA+GGG | + | chr8_2:63638564-63638583 | Msa1261330:CDS | 45.0% |
GGCCTTTAGCAGTAAGACTT+TGG | + | chr8_2:63638588-63638607 | Msa1261330:intron | 45.0% | |
CTTTCTTTCTTCCTGTTGGC+TGG | + | chr8_2:63638645-63638664 | Msa1261330:intron | 45.0% | |
AACCATGAGAGATAGACTGG+GGG | - | chr8_2:63638680-63638699 | None:intergenic | 45.0% | |
GAACCATGAGAGATAGACTG+GGG | - | chr8_2:63638681-63638700 | None:intergenic | 45.0% | |
GTGCAGTGAGGTTACTTCAT+TGG | + | chr8_2:63638760-63638779 | Msa1261330:intron | 45.0% | |
ACTTATGTTTCAGGCACAGC+AGG | + | chr8_2:63639528-63639547 | Msa1261330:CDS | 45.0% | |
! | TTTGATTGGCCATCGTTCCA+AGG | - | chr8_2:63639628-63639647 | None:intergenic | 45.0% |
GGCCAATCAAATTCTGTAGG+TGG | + | chr8_2:63639637-63639656 | Msa1261330:CDS | 45.0% | |
TCAGGGAAACCAATTTGTGC+AGG | - | chr8_2:63639685-63639704 | None:intergenic | 45.0% | |
TTTCCCTGAATTGCCTCATC+TGG | + | chr8_2:63639696-63639715 | Msa1261330:CDS | 45.0% | |
AGTCCAGATGAGGCAATTCA+GGG | - | chr8_2:63639702-63639721 | None:intergenic | 45.0% | |
AAGTCCAGATGAGGCAATTC+AGG | - | chr8_2:63639703-63639722 | None:intergenic | 45.0% | |
! | CTTCCGGTCAACTTGACTTT+TGG | - | chr8_2:63639883-63639902 | None:intergenic | 45.0% |
GTTTGCAGTTCCAGAGCTAT+TGG | - | chr8_2:63639940-63639959 | None:intergenic | 45.0% | |
!! | CTCTGGAACTGCAAACACAA+TGG | + | chr8_2:63639944-63639963 | Msa1261330:CDS | 45.0% |
! | GTCTGCATAGTTGGTGTAGA+GGG | - | chr8_2:63639987-63640006 | None:intergenic | 45.0% |
! | TGTCTGCATAGTTGGTGTAG+AGG | - | chr8_2:63639988-63640007 | None:intergenic | 45.0% |
TTGCCAACTTGGCAACAGAA+TGG | + | chr8_2:63640011-63640030 | Msa1261330:CDS | 45.0% | |
CACAATCAGGCAATGTATGC+AGG | - | chr8_2:63640106-63640125 | None:intergenic | 45.0% | |
CAAGAGCAACAGATCTTTGG+CGG | + | chr8_2:63640452-63640471 | Msa1261330:CDS | 45.0% | |
!!! | GATGTTTTTTGGAAGGGGGA+AGG | - | chr8_2:63640569-63640588 | None:intergenic | 45.0% |
! | TGACTGTTGTCACTTCTCCT+CGG | + | chr8_2:63640728-63640747 | Msa1261330:CDS | 45.0% |
GCTCTTCAAGCGTAGATTTC+AGG | - | chr8_2:63640948-63640967 | None:intergenic | 45.0% | |
AATGTCCGAAGAGAATGACC+AGG | - | chr8_2:63641813-63641832 | None:intergenic | 45.0% | |
TTATCAGGGTGGTGTAACTC+AGG | + | chr8_2:63642045-63642064 | Msa1261330:intron | 45.0% | |
ACTCAGGTGAGATTTCAACC+TGG | + | chr8_2:63642061-63642080 | Msa1261330:CDS | 45.0% | |
GGTGAGATTTCAACCTGGTT+TGG | + | chr8_2:63642066-63642085 | Msa1261330:CDS | 45.0% | |
!! | TCTTTTGACTCTGGACCGAT+AGG | + | chr8_2:63642725-63642744 | Msa1261330:intron | 45.0% |
CGACAAGCTTGTATCTGCAT+TGG | + | chr8_2:63642829-63642848 | Msa1261330:CDS | 45.0% | |
CTCCTTCAGGCAACAAACAT+AGG | + | chr8_2:63642950-63642969 | Msa1261330:three_prime_UTR | 45.0% | |
CAGGCAACAAACATAGGAAG+TGG | + | chr8_2:63642956-63642975 | Msa1261330:three_prime_UTR | 45.0% | |
!! | AAATAATGTAATAAAAATAA+TGG | - | chr8_2:63636602-63636621 | None:intergenic | 5.0% |
!!! | TTTTTAGTTTATTAATTAAT+TGG | + | chr8_2:63639258-63639277 | Msa1261330:intron | 5.0% |
!!! | TTTTAGTTTATTAATTAATT+GGG | + | chr8_2:63639259-63639278 | Msa1261330:intron | 5.0% |
!! | CGGTGGCTTTTCAAGAATCG+CGG | + | chr8_2:63635537-63635556 | Msa1261330:intron | 50.0% |
CAAGAATCGCGGCTACAAAG+CGG | + | chr8_2:63635548-63635567 | Msa1261330:intron | 50.0% | |
ACACACGTGATTACGGCTCA+CGG | + | chr8_2:63635636-63635655 | Msa1261330:intron | 50.0% | |
GACACATGTTGGTATCACGG+TGG | - | chr8_2:63635676-63635695 | None:intergenic | 50.0% | |
TGTGTGACACCGACACATGT+TGG | - | chr8_2:63635687-63635706 | None:intergenic | 50.0% | |
GGTGTAGTTATGGATGCACC+TGG | + | chr8_2:63636049-63636068 | Msa1261330:intron | 50.0% | |
CACTCGAAGAGAGAACAACC+AGG | - | chr8_2:63636070-63636089 | None:intergenic | 50.0% | |
CTGGTTGTTCTCTCTTCGAG+TGG | + | chr8_2:63636068-63636087 | Msa1261330:CDS | 50.0% | |
GTTGTTCTCTCTTCGAGTGG+TGG | + | chr8_2:63636071-63636090 | Msa1261330:CDS | 50.0% | |
! | TCGAGTGGTGGTCTGTTTTC+TGG | + | chr8_2:63636083-63636102 | Msa1261330:CDS | 50.0% |
! | CGAGTGGTGGTCTGTTTTCT+GGG | + | chr8_2:63636084-63636103 | Msa1261330:CDS | 50.0% |
GCATTGGACAATGGAGACCA+AGG | + | chr8_2:63636302-63636321 | Msa1261330:intron | 50.0% | |
CAGGGCTCTGCAATATGAAC+TGG | - | chr8_2:63636869-63636888 | None:intergenic | 50.0% | |
CATATTGCTGCAGCTGAGCA+GGG | - | chr8_2:63636887-63636906 | None:intergenic | 50.0% | |
CTGCTCAGCTGCAGCAATAT+GGG | + | chr8_2:63636886-63636905 | Msa1261330:CDS | 50.0% | |
TGCTCAGCTGCAGCAATATG+GGG | + | chr8_2:63636887-63636906 | Msa1261330:CDS | 50.0% | |
AGGTTGAAGACTCCCCTTCA+GGG | + | chr8_2:63637023-63637042 | Msa1261330:CDS | 50.0% | |
CTTGTAACCCTGGAAGTTGC+TGG | - | chr8_2:63637449-63637468 | None:intergenic | 50.0% | |
GTGGCATGAGTGCAATGATG+AGG | + | chr8_2:63637573-63637592 | Msa1261330:CDS | 50.0% | |
GTTAGGAGGTAGTTAGGAGG+AGG | - | chr8_2:63638212-63638231 | None:intergenic | 50.0% | |
GGTAGCGACTTGACTCTGAA+AGG | + | chr8_2:63638563-63638582 | Msa1261330:CDS | 50.0% | |
TTCCCCCAGTCTATCTCTCA+TGG | + | chr8_2:63638675-63638694 | Msa1261330:intron | 50.0% | |
GGGCCTTAAATTCAGCTGTG+AGG | + | chr8_2:63639279-63639298 | Msa1261330:intron | 50.0% | |
GGGATTGGATGAGCATCATG+CGG | + | chr8_2:63639438-63639457 | Msa1261330:intron | 50.0% | |
AGGAGCTGTAATGCGTGTCT+AGG | + | chr8_2:63639823-63639842 | Msa1261330:intron | 50.0% | |
TCAGGTCTTGCCAATAGCTC+TGG | + | chr8_2:63639927-63639946 | Msa1261330:CDS | 50.0% | |
GGCAATCGTGTCTGCATAGT+TGG | - | chr8_2:63639996-63640015 | None:intergenic | 50.0% | |
TGCAGACACGATTGCCAACT+TGG | + | chr8_2:63640000-63640019 | Msa1261330:CDS | 50.0% | |
! | TCAGATGGACGAGTTGACCA+AGG | + | chr8_2:63640507-63640526 | Msa1261330:CDS | 50.0% |
!! | TTTTTGGAAGGGGGAAGGGA+GGG | - | chr8_2:63640564-63640583 | None:intergenic | 50.0% |
!!! | TTTTTTGGAAGGGGGAAGGG+AGG | - | chr8_2:63640565-63640584 | None:intergenic | 50.0% |
! | TGTTGTCACTTCTCCTCGGA+TGG | + | chr8_2:63640732-63640751 | Msa1261330:CDS | 50.0% |
! | CGCTTGAAGAGCACACTCAA+CGG | + | chr8_2:63640956-63640975 | Msa1261330:CDS | 50.0% |
TGCAGCCTGGTCATTCTCTT+CGG | + | chr8_2:63641805-63641824 | Msa1261330:intron | 50.0% | |
GCAAGAACCTTTCCCAAACC+AGG | - | chr8_2:63642082-63642101 | None:intergenic | 50.0% | |
CAGGAGCTACATTACGAGGA+GGG | - | chr8_2:63642427-63642446 | None:intergenic | 50.0% | |
TCAGGAGCTACATTACGAGG+AGG | - | chr8_2:63642428-63642447 | None:intergenic | 50.0% | |
TGGTCAGGAGCTACATTACG+AGG | - | chr8_2:63642431-63642450 | None:intergenic | 50.0% | |
CTGAACGAACAAGGCTCATG+TGG | - | chr8_2:63642477-63642496 | None:intergenic | 50.0% | |
CTGGTTAAACTCTGGGCCAT+TGG | + | chr8_2:63642544-63642563 | Msa1261330:CDS | 50.0% | |
GTAGCTAGGATGGAAAACGC+AGG | - | chr8_2:63642629-63642648 | None:intergenic | 50.0% | |
!! | GCTTATGCTCTGGGACTTTG+AGG | + | chr8_2:63642778-63642797 | Msa1261330:CDS | 50.0% |
GATACAAGCTTGTCGTGTGC+AGG | - | chr8_2:63642824-63642843 | None:intergenic | 50.0% | |
CCATATTGCTGCAGCTGAGC+AGG | - | chr8_2:63636888-63636907 | None:intergenic | 55.0% | |
CCTGCTCAGCTGCAGCAATA+TGG | + | chr8_2:63636885-63636904 | Msa1261330:CDS | 55.0% | |
CTCCTATGGTGAGGCAGAAC+CGG | + | chr8_2:63636961-63636980 | Msa1261330:CDS | 55.0% | |
TCCTATGGTGAGGCAGAACC+GGG | + | chr8_2:63636962-63636981 | Msa1261330:CDS | 55.0% | |
! | CAGGTTGAAGACTCCCCTTC+AGG | + | chr8_2:63637022-63637041 | Msa1261330:CDS | 55.0% |
GAAGGCTGTCCACCAGTTCT+TGG | - | chr8_2:63637245-63637264 | None:intergenic | 55.0% | |
! | AGAACTGGTGGACAGCCTTC+AGG | + | chr8_2:63637245-63637264 | Msa1261330:CDS | 55.0% |
! | GAACTGGTGGACAGCCTTCA+GGG | + | chr8_2:63637246-63637265 | Msa1261330:CDS | 55.0% |
CTGAATCAGGCCATGCACAG+TGG | + | chr8_2:63637554-63637573 | Msa1261330:intron | 55.0% | |
TGCACTCATGCCACTGTGCA+TGG | - | chr8_2:63637567-63637586 | None:intergenic | 55.0% | |
! | GCGACTTGACTCTGAAAGGG+TGG | + | chr8_2:63638567-63638586 | Msa1261330:CDS | 55.0% |
GGAATGTCACACCAGCCAAC+AGG | - | chr8_2:63638659-63638678 | None:intergenic | 55.0% | |
TGGCATTCAGTGGTGCAGTG+AGG | + | chr8_2:63638748-63638767 | Msa1261330:intron | 55.0% | |
CATGCCCCCCCTAGAAAACA+AGG | + | chr8_2:63640249-63640268 | Msa1261330:intron | 55.0% | |
! | GCCTTGTTCGTTCAGTGTGC+TGG | + | chr8_2:63642482-63642501 | Msa1261330:CDS | 55.0% |
GCCAGCACACTGAACGAACA+AGG | - | chr8_2:63642486-63642505 | None:intergenic | 55.0% | |
! | TCAGTGTGCTGGCACTCTTC+TGG | + | chr8_2:63642493-63642512 | Msa1261330:CDS | 55.0% |
CTCTGGGCCATTGGATCTGA+TGG | + | chr8_2:63642553-63642572 | Msa1261330:CDS | 55.0% | |
GCCATTGGATCTGATGGCAG+CGG | + | chr8_2:63642559-63642578 | Msa1261330:CDS | 55.0% | |
CCATTGGATCTGATGGCAGC+GGG | + | chr8_2:63642560-63642579 | Msa1261330:CDS | 55.0% | |
CATTGGATCTGATGGCAGCG+GGG | + | chr8_2:63642561-63642580 | Msa1261330:CDS | 55.0% | |
ACCCGGTTCTGCCTCACCAT+AGG | - | chr8_2:63636966-63636985 | None:intergenic | 60.0% | |
CTCGTTTGGAAGCTGACCGC+GGG | - | chr8_2:63637192-63637211 | None:intergenic | 60.0% | |
CCTCGTTTGGAAGCTGACCG+CGG | - | chr8_2:63637193-63637212 | None:intergenic | 60.0% | |
CCCGCTGCCATCAGATCCAA+TGG | - | chr8_2:63642563-63642582 | None:intergenic | 60.0% | |
CCGCGGTCAGCTTCCAAACG+AGG | + | chr8_2:63637190-63637209 | Msa1261330:CDS | 65.0% | |
TTGGAAGGGGGAAGGGAGGG+TGG | - | chr8_2:63640561-63640580 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 63635176 | 63643135 | 63635176 | ID=Msa1261330;Name=Msa1261330 |
chr8_2 | mRNA | 63635176 | 63643135 | 63635176 | ID=Msa1261330-mRNA-1;Parent=Msa1261330;Name=Msa1261330-mRNA-1;_AED=0.10;_eAED=0.11;_QI=0|0.37|0.29|1|1|1|17|216|769 |
chr8_2 | exon | 63635176 | 63635269 | 63635176 | ID=Msa1261330-mRNA-1:exon:20392;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63635856 | 63635945 | 63635856 | ID=Msa1261330-mRNA-1:exon:20393;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63636056 | 63636165 | 63636056 | ID=Msa1261330-mRNA-1:exon:20394;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63636825 | 63637073 | 63636825 | ID=Msa1261330-mRNA-1:exon:20395;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63637173 | 63637267 | 63637173 | ID=Msa1261330-mRNA-1:exon:20396;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63637383 | 63637467 | 63637383 | ID=Msa1261330-mRNA-1:exon:20397;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63637563 | 63637638 | 63637563 | ID=Msa1261330-mRNA-1:exon:20398;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63638549 | 63638598 | 63638549 | ID=Msa1261330-mRNA-1:exon:20399;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63639439 | 63639738 | 63639439 | ID=Msa1261330-mRNA-1:exon:20400;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63639876 | 63640067 | 63639876 | ID=Msa1261330-mRNA-1:exon:20401;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63640435 | 63640528 | 63640435 | ID=Msa1261330-mRNA-1:exon:20402;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63640679 | 63640788 | 63640679 | ID=Msa1261330-mRNA-1:exon:20403;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63640916 | 63641065 | 63640916 | ID=Msa1261330-mRNA-1:exon:20404;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63641810 | 63641959 | 63641810 | ID=Msa1261330-mRNA-1:exon:20405;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63642052 | 63642168 | 63642052 | ID=Msa1261330-mRNA-1:exon:20406;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63642472 | 63642675 | 63642472 | ID=Msa1261330-mRNA-1:exon:20407;Parent=Msa1261330-mRNA-1 |
chr8_2 | exon | 63642776 | 63643135 | 63642776 | ID=Msa1261330-mRNA-1:exon:20408;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63635176 | 63635269 | 63635176 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63635856 | 63635945 | 63635856 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63636056 | 63636165 | 63636056 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63636825 | 63637073 | 63636825 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63637173 | 63637267 | 63637173 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63637383 | 63637467 | 63637383 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63637563 | 63637638 | 63637563 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63638549 | 63638598 | 63638549 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63639439 | 63639738 | 63639439 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63639876 | 63640067 | 63639876 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63640435 | 63640528 | 63640435 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63640679 | 63640788 | 63640679 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63640916 | 63641065 | 63640916 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63641810 | 63641959 | 63641810 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63642052 | 63642168 | 63642052 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63642472 | 63642675 | 63642472 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | CDS | 63642776 | 63642919 | 63642776 | ID=Msa1261330-mRNA-1:cds;Parent=Msa1261330-mRNA-1 |
chr8_2 | three_prime_UTR | 63642920 | 63643135 | 63642920 | ID=Msa1261330-mRNA-1:three_prime_utr;Parent=Msa1261330-mRNA-1 |
Gene Sequence |
Protein sequence |