AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1269140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1269140 MtrunA17_Chr4g0051351 97.248 327 7 1 1 325 1 327 0.0 659
Msa1269140 MtrunA17_Chr5g0433631 47.899 238 122 2 86 322 24 260 3.98e-72 226
Msa1269140 MtrunA17_Chr5g0428191 46.610 236 121 3 89 322 5 237 2.90e-68 216
Msa1269140 MtrunA17_Chr5g0433531 45.570 237 124 3 88 322 4 237 1.17e-64 207
Msa1269140 MtrunA17_Chr7g0223111 46.383 235 121 3 90 322 32 263 2.14e-64 207
Msa1269140 MtrunA17_Chr5g0433661 44.715 246 129 4 81 322 29 271 1.02e-62 202
Msa1269140 MtrunA17_Chr5g0424971 42.688 253 133 6 75 324 2 245 3.43e-62 201
Msa1269140 MtrunA17_Chr5g0433411 40.377 265 153 4 61 322 1 263 2.54e-59 193
Msa1269140 MtrunA17_Chr5g0433541 42.727 220 125 1 89 307 5 224 6.79e-58 187
Msa1269140 MtrunA17_Chr5g0433551 42.727 220 125 1 89 307 5 224 6.79e-58 187
Msa1269140 MtrunA17_Chr1g0169371 47.887 213 105 4 112 322 3 211 1.36e-57 187
Msa1269140 MtrunA17_Chr5g0433731 46.465 198 104 2 111 307 9 205 9.75e-54 177
Msa1269140 MtrunA17_Chr7g0259431 44.860 214 113 3 111 322 9 219 5.58e-52 173
Msa1269140 MtrunA17_Chr2g0298951 43.269 208 107 2 111 307 9 216 5.25e-50 168
Msa1269140 MtrunA17_Chr1g0169381 50.980 153 74 1 87 239 3 154 1.44e-48 160
Msa1269140 MtrunA17_Chr5g0433521 44.907 216 114 3 111 324 23 235 5.68e-48 163
Msa1269140 MtrunA17_Chr5g0433721 44.503 191 101 3 132 320 1 188 1.33e-44 153
Msa1269140 MtrunA17_Chr2g0298941 40.506 158 91 2 154 308 1 158 3.96e-32 120
Msa1269140 MtrunA17_Chr5g0433881 39.175 194 96 6 142 322 22 206 8.43e-29 112
Msa1269140 MtrunA17_Chr4g0028681 45.000 120 64 2 172 289 21 140 1.74e-25 99.4
Msa1269140 MtrunA17_Chr7g0258941 29.907 214 139 6 94 296 58 271 6.57e-23 96.7
Msa1269140 MtrunA17_Chr3g0126851 28.235 255 139 8 74 288 37 287 2.84e-21 92.4
Msa1269140 MtrunA17_Chr1g0147041 28.030 264 145 8 66 288 36 295 1.09e-20 90.9
Msa1269140 MtrunA17_Chr8g0346801 28.037 214 141 6 94 295 43 255 1.25e-20 90.5
Msa1269140 MtrunA17_Chr1g0175721 36.090 133 78 3 94 219 57 189 9.14e-20 88.2
Msa1269140 MtrunA17_Chr7g0275701 35.897 117 73 1 94 208 60 176 3.14e-19 86.7
Msa1269140 MtrunA17_Chr8g0352701 33.065 124 81 1 87 208 45 168 1.95e-18 84.3
Msa1269140 MtrunA17_Chr3g0083571 32.479 117 77 1 94 208 52 168 4.45e-18 83.2
Msa1269140 MtrunA17_Chr7g0253271 25.116 215 147 3 111 322 3 206 2.26e-17 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1269140 AT5G37930.1 37.059 340 196 7 1 322 1 340 9.40e-68 216
Msa1269140 AT5G37890.1 36.900 271 156 5 68 323 11 281 4.48e-52 173
Msa1269140 AT5G37870.1 34.483 261 158 6 58 307 2 260 1.03e-46 159
Msa1269140 AT1G66620.1 34.426 244 152 5 87 323 33 275 2.51e-42 149
Msa1269140 AT5G37910.1 32.432 259 168 4 71 322 11 269 4.32e-42 147
Msa1269140 AT1G66650.1 33.725 255 159 6 78 322 66 320 4.36e-40 143
Msa1269140 AT5G62800.1 34.146 246 150 6 87 321 32 276 2.66e-38 139
Msa1269140 AT5G62800.2 34.199 231 142 5 87 308 32 261 4.33e-38 138
Msa1269140 AT1G66630.1 33.188 229 145 4 87 307 38 266 7.09e-37 134
Msa1269140 AT1G66660.2 38.942 208 117 5 94 292 102 308 6.49e-35 130
Msa1269140 AT3G58040.1 28.571 224 120 6 94 279 56 277 2.16e-21 92.8
Msa1269140 AT3G58040.3 28.571 224 120 6 94 279 56 277 2.16e-21 92.8
Msa1269140 AT1G66610.2 48.148 81 42 0 87 167 150 230 5.80e-20 87.4
Msa1269140 AT1G66610.2 47.887 71 37 0 87 157 45 115 1.47e-16 78.2
Msa1269140 AT3G58040.2 35.897 117 73 1 94 208 56 172 7.88e-20 86.7
Msa1269140 AT4G27880.1 28.326 233 125 7 94 288 60 288 1.69e-19 87.8
Msa1269140 AT3G61790.1 26.852 216 141 6 94 295 59 271 3.88e-19 87.0
Msa1269140 AT2G41980.1 27.679 224 122 6 94 279 53 274 5.97e-19 86.3
Msa1269140 AT5G37900.1 27.372 274 147 9 58 322 2 232 3.27e-18 82.8
Msa1269140 AT1G66610.1 47.887 71 37 0 87 157 45 115 7.42e-17 80.9
Msa1269140 AT1G66610.1 23.111 225 129 5 87 307 150 334 2.31e-11 64.7
Msa1269140 AT1G66660.1 33.333 165 100 5 137 292 21 184 8.33e-15 72.8

Find 97 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATTTGCATCACTTTCT+AGG 0.158565 8_3:-2346770 None:intergenic
CCCTTCGACGCTTCTGATTT+GGG 0.200729 8_3:-2346641 None:intergenic
ACCCTTCGACGCTTCTGATT+TGG 0.236738 8_3:-2346642 None:intergenic
GTGATACCTTCAGATCATTT+TGG 0.244972 8_3:+2349790 Msa1269140:CDS
CACTTTCTAGGGTTCCAATT+GGG 0.251899 8_3:-2346758 None:intergenic
GAGAAACTAACCTGATAAAT+AGG 0.279326 8_3:-2346912 None:intergenic
TATATGTATTTACTTCATTT+AGG 0.279905 8_3:+2349899 Msa1269140:three_prime_UTR
TTGTTTCTGTCGGGTGTTTA+AGG 0.286041 8_3:-2349548 None:intergenic
GTTGGCAGTTCCTATTTATC+AGG 0.301407 8_3:+2346902 Msa1269140:CDS
TCATGCCCAAATGCAAAATA+TGG 0.302073 8_3:+2349340 Msa1269140:CDS
ATGAGTATCTGTAATTGCTT+TGG 0.327561 8_3:-2349665 None:intergenic
TGGGGCCCATGCAACTAATA+TGG 0.330450 8_3:-2349645 None:intergenic
TTTGTTAATGTATGGGATTA+TGG 0.339998 8_3:+2350019 Msa1269140:three_prime_UTR
TGAGTATCTGTAATTGCTTT+GGG 0.348073 8_3:-2349664 None:intergenic
AGCCATAGACATGTAGGCTT+TGG 0.370933 8_3:+2349490 Msa1269140:CDS
TCACTTTCTAGGGTTCCAAT+TGG 0.375712 8_3:-2346759 None:intergenic
TTCCAAAGCCTACATGTCTA+TGG 0.376111 8_3:-2349492 None:intergenic
CGCTTCTGATTTGGGTTGCT+AGG 0.377978 8_3:-2346633 None:intergenic
TTCATTTGCATCACTTTCTA+GGG 0.383201 8_3:-2346769 None:intergenic
TCCGTTGGTGGCTGCGACGA+CGG 0.393400 8_3:+2346603 Msa1269140:CDS
CATTGTTCAACACGGAAATA+TGG 0.401345 8_3:+2349621 Msa1269140:CDS
ATCACCATTATTGTCTTGAA+TGG 0.403554 8_3:-2349746 None:intergenic
ACCTCAAGAAGGGTTTGAAA+TGG 0.426795 8_3:+2346728 Msa1269140:CDS
CTAAATGTTGTGGCGAACTT+AGG 0.432109 8_3:+2349236 Msa1269140:CDS
ATGACAATTCAGTGTGAGAA+TGG 0.433397 8_3:+2349199 Msa1269140:intron
AATTTGACTGTTCTCAAGAA+AGG 0.436681 8_3:+2349964 Msa1269140:three_prime_UTR
AAGACCATTCAAGACAATAA+TGG 0.440444 8_3:+2349742 Msa1269140:CDS
TTCAGTCTCCTACTCAATGA+AGG 0.449119 8_3:-2349989 None:intergenic
AGATACTCATTATGATGTCT+TGG 0.455304 8_3:+2349678 Msa1269140:CDS
ATGAAGCAATCAAGAACATC+AGG 0.457363 8_3:-2346867 None:intergenic
ACTGCTTCAATCTTTAATGA+AGG 0.459023 8_3:-2349857 None:intergenic
ATTTAAACTTGTTGGAGCCT+CGG 0.462862 8_3:+2350079 Msa1269140:three_prime_UTR
GACAGAAATAAATTTGTCAT+AGG 0.474575 8_3:-2349524 None:intergenic
CCATTGGGTACAATCGTTGT+CGG 0.475632 8_3:+2349284 Msa1269140:CDS
GAAGAACGATTTGTTTCTGT+CGG 0.475758 8_3:-2349558 None:intergenic
AATGGTGATGCTCCTACAGC+TGG 0.477922 8_3:+2349760 Msa1269140:CDS
AGAAAACCGCAGCCTGTATG+TGG 0.478966 8_3:-2349436 None:intergenic
TCGGGCTGTGGAGAAGTTGC+TGG 0.481629 8_3:+2349303 Msa1269140:CDS
CCTGTATGTGGGCATTTACA+TGG 0.490637 8_3:-2349424 None:intergenic
TTATTTCGATAAAACTGCTA+TGG 0.493820 8_3:-2346535 None:intergenic
ATTATTCTGTTGTCCCGCGT+TGG 0.496225 8_3:-2346808 None:intergenic
CTTCATTTGCTCTGAACCGT+TGG 0.497414 8_3:+2346884 Msa1269140:CDS
TGCTGCTGCGACTTCTTCGC+CGG 0.501882 8_3:-2346670 None:intergenic
CCATGTAAATGCCCACATAC+AGG 0.503440 8_3:+2349424 Msa1269140:CDS
GCAAATGAAGGAAATTCGAT+TGG 0.505880 8_3:+2346783 Msa1269140:CDS
GATGTCTTGGCTAGGTCTCA+AGG 0.507593 8_3:+2349691 Msa1269140:CDS
AAGAACGATTTGTTTCTGTC+GGG 0.508691 8_3:-2349557 None:intergenic
GTACAATCGTTGTCGGGCTG+TGG 0.509508 8_3:+2349291 Msa1269140:CDS
CTATGTGTTCAATGCCCATT+GGG 0.510564 8_3:+2349269 Msa1269140:CDS
ACTTTCTAGGGTTCCAATTG+GGG 0.510987 8_3:-2346757 None:intergenic
TATGGTCCATATTAGTTGCA+TGG 0.517833 8_3:+2349639 Msa1269140:CDS
CATTGGGTACAATCGTTGTC+GGG 0.519280 8_3:+2349285 Msa1269140:CDS
CGACAACGATTGTACCCAAT+GGG 0.519980 8_3:-2349283 None:intergenic
GAAAATCAACAACCTCAAGA+AGG 0.520905 8_3:+2346717 Msa1269140:CDS
CTAGAAAGTGATGCAAATGA+AGG 0.526137 8_3:+2346771 Msa1269140:CDS
TGACAATTCAGTGTGAGAAT+GGG 0.526375 8_3:+2349200 Msa1269140:intron
ACCCAAATCAGAAGCGTCGA+AGG 0.529769 8_3:+2346640 Msa1269140:CDS
ATGGTCCATATTAGTTGCAT+GGG 0.539765 8_3:+2349640 Msa1269140:CDS
TCCATTTCAAACCCTTCTTG+AGG 0.542975 8_3:-2346729 None:intergenic
ATCGAACAATTTACTCCATG+TGG 0.544416 8_3:+2349932 Msa1269140:three_prime_UTR
CTACATGTCTATGGCTGAAG+TGG 0.550650 8_3:-2349483 None:intergenic
CCAAAACCAAAATGATCTGA+AGG 0.552003 8_3:-2349796 None:intergenic
AAGTAGTTCTAAAAGTACAT+AGG 0.553864 8_3:+2346458 Msa1269140:five_prime_UTR
ATGTCTTGGCTAGGTCTCAA+GGG 0.554968 8_3:+2349692 Msa1269140:CDS
GAAAGGTGCCTTCATTGAGT+AGG 0.579378 8_3:+2349981 Msa1269140:three_prime_UTR
GAGAGCTAACTCCTTGGATG+AGG 0.580307 8_3:-2349461 None:intergenic
GAAGTGGAGAGCTAACTCCT+TGG 0.581920 8_3:-2349467 None:intergenic
GGTGGCTGCGACGACGGTGA+AGG 0.585524 8_3:+2346609 Msa1269140:CDS
ACCGTCGTCGCAGCCACCAA+CGG 0.585882 8_3:-2346604 None:intergenic
CTCATTATGATGTCTTGGCT+AGG 0.586450 8_3:+2349683 Msa1269140:CDS
CCTATGTGTTCAATGCCCAT+TGG 0.588386 8_3:+2349268 Msa1269140:CDS
CACTTCAGCCATAGACATGT+AGG 0.588738 8_3:+2349484 Msa1269140:CDS
CTTTCTAGGGTTCCAATTGG+GGG 0.590025 8_3:-2346756 None:intergenic
AAAATCAACAACCTCAAGAA+GGG 0.590977 8_3:+2346718 Msa1269140:CDS
CAAATTCAATTATGCCCACA+TGG 0.592266 8_3:-2349947 None:intergenic
ATTGCTTGCTCTAAATGTTG+TGG 0.594305 8_3:+2349226 Msa1269140:CDS
AAATGCCCACATACAGGCTG+CGG 0.599126 8_3:+2349430 Msa1269140:CDS
CACAACCACATTGTTCAACA+CGG 0.599185 8_3:+2349613 Msa1269140:CDS
TATGAAAAGTAGCCACGAGA+AGG 0.604930 8_3:+2349387 Msa1269140:CDS
GAGTATCTGTAATTGCTTTG+GGG 0.614300 8_3:-2349663 None:intergenic
TATATATGCATTCCTTCTCG+TGG 0.624533 8_3:-2349399 None:intergenic
CATCGGTGGTTGTTTCTCGT+AGG 0.627486 8_3:-2346571 None:intergenic
CCCAAATCAGAAGCGTCGAA+GGG 0.630719 8_3:+2346641 Msa1269140:CDS
CCGACAACGATTGTACCCAA+TGG 0.633247 8_3:-2349284 None:intergenic
AATTCGATTGGATCCAACGC+GGG 0.643151 8_3:+2346795 Msa1269140:CDS
ACGGAAAATGTCACCATCGG+TGG 0.644933 8_3:-2346585 None:intergenic
TCGAACAATTTACTCCATGT+GGG 0.645659 8_3:+2349933 Msa1269140:three_prime_UTR
ATCACAAGAAATCCAGCTGT+AGG 0.650350 8_3:-2349772 None:intergenic
GAAAACCGCAGCCTGTATGT+GGG 0.651825 8_3:-2349435 None:intergenic
CCAACGGAAAATGTCACCAT+CGG 0.660932 8_3:-2346588 None:intergenic
AAGCGTCGAAGGGTTGACGC+CGG 0.663392 8_3:+2346651 Msa1269140:CDS
CTACGAGAAACAACCACCGA+TGG 0.677545 8_3:+2346572 Msa1269140:exon
TGATAAATAGGAACTGCCAA+CGG 0.683227 8_3:-2346900 None:intergenic
AACTAAACTAATTGTCACCG+AGG 0.687947 8_3:-2350096 None:intergenic
CCAATGGGCATTGAACACAT+AGG 0.714486 8_3:-2349268 None:intergenic
TATTTCCGTGTTGAACAATG+TGG 0.729405 8_3:-2349618 None:intergenic
AAATTCGATTGGATCCAACG+CGG 0.768622 8_3:+2346794 Msa1269140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTGTATGAATTT+TGG + chr8_3:2346982-2347001 Msa1269140:intron 10.0%
!!! ACTATAAAGTTTGAATTTTT+TGG + chr8_3:2346954-2346973 Msa1269140:intron 15.0%
!!! ATTTCTTTTTTGTATTTTGA+GGG + chr8_3:2347633-2347652 Msa1269140:intron 15.0%
!! TACAATTGAATGAATTTATA+TGG + chr8_3:2348140-2348159 Msa1269140:intron 15.0%
!!! AAAAAGTGAATTTTGTATTT+TGG - chr8_3:2348188-2348207 None:intergenic 15.0%
!!! TGAAAAAAGTGATTTTTTTA+AGG - chr8_3:2348322-2348341 None:intergenic 15.0%
!!! TTGATGACATATAATTATAA+AGG + chr8_3:2348636-2348655 Msa1269140:intron 15.0%
!! ATTTAAATTTGAATTGATGT+TGG + chr8_3:2348835-2348854 Msa1269140:intron 15.0%
!! TATATGTATTTACTTCATTT+AGG + chr8_3:2349899-2349918 Msa1269140:three_prime_UTR 15.0%
!! TGTTAAAAATTTAAACTTGT+TGG + chr8_3:2350071-2350090 Msa1269140:three_prime_UTR 15.0%
!!! TTTCTCAATTCCTTTTTAAA+AGG - chr8_3:2347169-2347188 None:intergenic 20.0%
!!! TTTTACTGTAAAAAGTTCAT+TGG + chr8_3:2347334-2347353 Msa1269140:intron 20.0%
!!! TATAACAGTAAAAAGTTGAT+TGG - chr8_3:2347464-2347483 None:intergenic 20.0%
!!! TTTTTACTGTTATATCAATG+TGG + chr8_3:2347470-2347489 Msa1269140:intron 20.0%
!! ATTACATTACATTACATTAG+GGG - chr8_3:2347540-2347559 None:intergenic 20.0%
!! CATTACATTACATTACATTA+GGG - chr8_3:2347541-2347560 None:intergenic 20.0%
!! TCATTACATTACATTACATT+AGG - chr8_3:2347542-2347561 None:intergenic 20.0%
!!! CATTTCTTTTTTGTATTTTG+AGG + chr8_3:2347632-2347651 Msa1269140:intron 20.0%
!! TACAAATATGTATAGAAAGA+CGG + chr8_3:2348084-2348103 Msa1269140:intron 20.0%
!!! TTGTATTTTGGTTAAATTTG+AGG - chr8_3:2348176-2348195 None:intergenic 20.0%
!!! ATACAAAATTCACTTTTTCA+TGG + chr8_3:2348190-2348209 Msa1269140:intron 20.0%
!!! TCATTTTTAAGTGTTTGTTT+AGG + chr8_3:2348339-2348358 Msa1269140:intron 20.0%
!!! TGTTCATTGAAAATATTTTG+TGG + chr8_3:2348944-2348963 Msa1269140:intron 20.0%
!!! TAAAAAAAAGTACCTTTGAA+AGG - chr8_3:2349118-2349137 None:intergenic 20.0%
!!! AGGTACTTTTTTTTATTGTT+TGG + chr8_3:2349123-2349142 Msa1269140:intron 20.0%
!!! AAAATGCTTTTGTTAATGTA+TGG + chr8_3:2350011-2350030 Msa1269140:three_prime_UTR 20.0%
!!! AAATGCTTTTGTTAATGTAT+GGG + chr8_3:2350012-2350031 Msa1269140:three_prime_UTR 20.0%
!!! AAGTAGTTCTAAAAGTACAT+AGG + chr8_3:2346458-2346477 Msa1269140:five_prime_UTR 25.0%
! TTATTTCGATAAAACTGCTA+TGG - chr8_3:2346538-2346557 None:intergenic 25.0%
!!! GTTTTTGCTGTTTTGAAATT+TGG + chr8_3:2347061-2347080 Msa1269140:intron 25.0%
!! AATTTGGAACCATAAAAAAG+TGG + chr8_3:2347077-2347096 Msa1269140:intron 25.0%
!!! AGCTAAAAACCACTTTTTTA+TGG - chr8_3:2347089-2347108 None:intergenic 25.0%
!!! GTTTTTAGCTGTAATGATTT+AGG + chr8_3:2347099-2347118 Msa1269140:intron 25.0%
!! TTATTGTGTGAGTTGAAATT+TGG + chr8_3:2347131-2347150 Msa1269140:intron 25.0%
!! TATTGTGTGAGTTGAAATTT+GGG + chr8_3:2347132-2347151 Msa1269140:intron 25.0%
!!! GAAGAAGTTTCCTTTTAAAA+AGG + chr8_3:2347156-2347175 Msa1269140:intron 25.0%
!! TGATTACAATTGACTTACTA+TGG - chr8_3:2347200-2347219 None:intergenic 25.0%
! TGGTTATGTATTACATACAT+CGG - chr8_3:2347247-2347266 None:intergenic 25.0%
! TTGTACTGTAAAAAGTTCAT+TGG + chr8_3:2347291-2347310 Msa1269140:intron 25.0%
! TTACATTACATTACATTAGG+GGG - chr8_3:2347539-2347558 None:intergenic 25.0%
! CTCAGATTCAAAACAAATAA+AGG - chr8_3:2347884-2347903 None:intergenic 25.0%
! CTATACATATTTGTAGATGT+AGG - chr8_3:2348079-2348098 None:intergenic 25.0%
! ACAAATATGTATAGAAAGAC+GGG + chr8_3:2348085-2348104 Msa1269140:intron 25.0%
!!! AAAATTCACTTTTTCATGGA+GGG + chr8_3:2348194-2348213 Msa1269140:intron 25.0%
! TCCTAAAATGAAAAGCTATT+AGG + chr8_3:2348402-2348421 Msa1269140:intron 25.0%
!! TCCTAATAGCTTTTCATTTT+AGG - chr8_3:2348406-2348425 None:intergenic 25.0%
!!! TCTATTTTTTTTCAGCAACA+AGG + chr8_3:2348442-2348461 Msa1269140:intron 25.0%
!! CATCAAGTCTTTAAGAATTT+GGG - chr8_3:2348622-2348641 None:intergenic 25.0%
!! TCATCAAGTCTTTAAGAATT+TGG - chr8_3:2348623-2348642 None:intergenic 25.0%
!! TCTGAAGTACAATAATATGA+TGG + chr8_3:2348860-2348879 Msa1269140:intron 25.0%
! TTGTGGTTACTGTAATTTAA+AGG + chr8_3:2348961-2348980 Msa1269140:intron 25.0%
! TAAAGGTAATCAATAAGAGA+AGG + chr8_3:2348978-2348997 Msa1269140:intron 25.0%
! AAAGGTAATCAATAAGAGAA+GGG + chr8_3:2348979-2348998 Msa1269140:intron 25.0%
! AAAGGAACATACAATAAAAG+TGG - chr8_3:2349064-2349083 None:intergenic 25.0%
!! ACTTTTATTGTATGTTCCTT+TGG + chr8_3:2349063-2349082 Msa1269140:intron 25.0%
! AATTAGATCTCTCATTACAT+GGG - chr8_3:2349157-2349176 None:intergenic 25.0%
! AAATTAGATCTCTCATTACA+TGG - chr8_3:2349158-2349177 None:intergenic 25.0%
! GACAGAAATAAATTTGTCAT+AGG - chr8_3:2349527-2349546 None:intergenic 25.0%
! TTTGTTAATGTATGGGATTA+TGG + chr8_3:2350019-2350038 Msa1269140:three_prime_UTR 25.0%
TTAACATAAAAAGAAGCTGC+TGG - chr8_3:2346507-2346526 None:intergenic 30.0%
AAAATCAACAACCTCAAGAA+GGG + chr8_3:2346718-2346737 Msa1269140:CDS 30.0%
TTCATTTGCATCACTTTCTA+GGG - chr8_3:2346772-2346791 None:intergenic 30.0%
GAGAAACTAACCTGATAAAT+AGG - chr8_3:2346915-2346934 None:intergenic 30.0%
!! GGTTGTTATTTGATTTGTGA+TGG + chr8_3:2347003-2347022 Msa1269140:intron 30.0%
AAGAAGCTTGAAAATTGAGT+TGG + chr8_3:2347038-2347057 Msa1269140:intron 30.0%
AGAAGCTTGAAAATTGAGTT+GGG + chr8_3:2347039-2347058 Msa1269140:intron 30.0%
TTATGTATTACATACATCGG+TGG - chr8_3:2347244-2347263 None:intergenic 30.0%
! TTTTTACAGTACAAGACACT+GGG - chr8_3:2347285-2347304 None:intergenic 30.0%
TGTAAAAAGTTCATTGGATG+TGG + chr8_3:2347297-2347316 Msa1269140:intron 30.0%
GTAAAAAGTTCATTGGATGT+GGG + chr8_3:2347298-2347317 Msa1269140:intron 30.0%
TGTAAAAAGTTCATTGGATG+TGG + chr8_3:2347297-2347316 Msa1269140:intron 30.0%
GTAAAAAGTTCATTGGATGT+GGG + chr8_3:2347298-2347317 Msa1269140:intron 30.0%
! AGTAAAAAGTTGATTGGATG+GGG - chr8_3:2347458-2347477 None:intergenic 30.0%
! CAGTAAAAAGTTGATTGGAT+GGG - chr8_3:2347459-2347478 None:intergenic 30.0%
! ACAGTAAAAAGTTGATTGGA+TGG - chr8_3:2347460-2347479 None:intergenic 30.0%
TACTGTTATATCAATGTGGA+AGG + chr8_3:2347474-2347493 Msa1269140:intron 30.0%
TTATACTTATGCCTGAAATG+TGG + chr8_3:2347576-2347595 Msa1269140:intron 30.0%
!! TTGTATTTTGAGGGTTCAAA+AGG + chr8_3:2347642-2347661 Msa1269140:intron 30.0%
TGTTAGTAAGTGTTAGAACT+AGG + chr8_3:2347703-2347722 Msa1269140:intron 30.0%
GTTAGTAAGTGTTAGAACTA+GGG + chr8_3:2347704-2347723 Msa1269140:intron 30.0%
! CTCTTTCCTTTTACTTATGA+AGG + chr8_3:2347758-2347777 Msa1269140:intron 30.0%
TCACATCCTTCATAAGTAAA+AGG - chr8_3:2347767-2347786 None:intergenic 30.0%
TATGAAGGATGTGAACTTAT+TGG + chr8_3:2347773-2347792 Msa1269140:intron 30.0%
TGAGAAAAACTTAAGACTCA+AGG + chr8_3:2347816-2347835 Msa1269140:intron 30.0%
AGCAAATACACTAGCATAAT+TGG - chr8_3:2347910-2347929 None:intergenic 30.0%
ACTATTACATCGTCATAATC+AGG - chr8_3:2347946-2347965 None:intergenic 30.0%
TCCAACTCAGAAAATAGTAT+CGG - chr8_3:2348000-2348019 None:intergenic 30.0%
!! TACTATTTTCTGAGTTGGAA+AGG + chr8_3:2348001-2348020 Msa1269140:intron 30.0%
!!! CAAAATTCACTTTTTCATGG+AGG + chr8_3:2348193-2348212 Msa1269140:intron 30.0%
!!! ATTTTTTTTCAGCAACAAGG+AGG + chr8_3:2348445-2348464 Msa1269140:intron 30.0%
AAGGTAATCAATAAGAGAAG+GGG + chr8_3:2348980-2348999 Msa1269140:intron 30.0%
TGAGTATCTGTAATTGCTTT+GGG - chr8_3:2349667-2349686 None:intergenic 30.0%
ATGAGTATCTGTAATTGCTT+TGG - chr8_3:2349668-2349687 None:intergenic 30.0%
AGATACTCATTATGATGTCT+TGG + chr8_3:2349678-2349697 Msa1269140:CDS 30.0%
AAGACCATTCAAGACAATAA+TGG + chr8_3:2349742-2349761 Msa1269140:CDS 30.0%
ATCACCATTATTGTCTTGAA+TGG - chr8_3:2349749-2349768 None:intergenic 30.0%
ACTGCTTCAATCTTTAATGA+AGG - chr8_3:2349860-2349879 None:intergenic 30.0%
AATTTGACTGTTCTCAAGAA+AGG + chr8_3:2349964-2349983 Msa1269140:three_prime_UTR 30.0%
TCCTGTTAAAAACAGAACAA+TGG + chr8_3:2350145-2350164 Msa1269140:three_prime_UTR 30.0%
!!! ACCATTGTTCTGTTTTTAAC+AGG - chr8_3:2350149-2350168 None:intergenic 30.0%
GTTAAAAACAGAACAATGGT+TGG + chr8_3:2350149-2350168 Msa1269140:three_prime_UTR 30.0%
GAAAATCAACAACCTCAAGA+AGG + chr8_3:2346717-2346736 Msa1269140:CDS 35.0%
CTTCATTTGCATCACTTTCT+AGG - chr8_3:2346773-2346792 None:intergenic 35.0%
CTAGAAAGTGATGCAAATGA+AGG + chr8_3:2346771-2346790 Msa1269140:CDS 35.0%
GCAAATGAAGGAAATTCGAT+TGG + chr8_3:2346783-2346802 Msa1269140:CDS 35.0%
ATGAAGCAATCAAGAACATC+AGG - chr8_3:2346870-2346889 None:intergenic 35.0%
TGATAAATAGGAACTGCCAA+CGG - chr8_3:2346903-2346922 None:intergenic 35.0%
!! TATCAGGTTAGTTTCTCTTC+TGG + chr8_3:2346918-2346937 Msa1269140:intron 35.0%
!! ATCAGGTTAGTTTCTCTTCT+GGG + chr8_3:2346919-2346938 Msa1269140:intron 35.0%
! CTTTTTACAGTACAAGACAC+TGG - chr8_3:2347286-2347305 None:intergenic 35.0%
! GTTTTGTACTCCCCTTTTAA+AGG + chr8_3:2347375-2347394 Msa1269140:intron 35.0%
! AAAACCATGGCCTTTAAAAG+GGG - chr8_3:2347388-2347407 None:intergenic 35.0%
! CAAAACCATGGCCTTTAAAA+GGG - chr8_3:2347389-2347408 None:intergenic 35.0%
! GTAAAAAGTTGATTGGATGG+GGG - chr8_3:2347457-2347476 None:intergenic 35.0%
AAGGATGTAACATCAAACGT+GGG + chr8_3:2347493-2347512 Msa1269140:intron 35.0%
! TCCGATACTATTTTCTGAGT+TGG + chr8_3:2347996-2348015 Msa1269140:intron 35.0%
AGGGTATAGGTAAACGATTT+AGG + chr8_3:2348213-2348232 Msa1269140:intron 35.0%
GGGTATAGGTAAACGATTTA+GGG + chr8_3:2348214-2348233 Msa1269140:intron 35.0%
ATCACAGAACATCAGCTATA+TGG - chr8_3:2348248-2348267 None:intergenic 35.0%
TAGCTGATGTTCTGTGATAA+AGG + chr8_3:2348250-2348269 Msa1269140:intron 35.0%
AGCTGATGTTCTGTGATAAA+GGG + chr8_3:2348251-2348270 Msa1269140:intron 35.0%
GACCTCACATTATGATTCAT+AGG + chr8_3:2348884-2348903 Msa1269140:intron 35.0%
GACCTATGAATCATAATGTG+AGG - chr8_3:2348889-2348908 None:intergenic 35.0%
AGGTAATCAATAAGAGAAGG+GGG + chr8_3:2348981-2349000 Msa1269140:intron 35.0%
!!! TGTTCCTTTGGTTTTCTATC+TGG + chr8_3:2349075-2349094 Msa1269140:intron 35.0%
ATGACAATTCAGTGTGAGAA+TGG + chr8_3:2349199-2349218 Msa1269140:intron 35.0%
TGACAATTCAGTGTGAGAAT+GGG + chr8_3:2349200-2349219 Msa1269140:intron 35.0%
! ATTGCTTGCTCTAAATGTTG+TGG + chr8_3:2349226-2349245 Msa1269140:CDS 35.0%
TCATGCCCAAATGCAAAATA+TGG + chr8_3:2349340-2349359 Msa1269140:CDS 35.0%
! TGCAGCCATATTTTGCATTT+GGG - chr8_3:2349348-2349367 None:intergenic 35.0%
! TTGCAGCCATATTTTGCATT+TGG - chr8_3:2349349-2349368 None:intergenic 35.0%
TATATATGCATTCCTTCTCG+TGG - chr8_3:2349402-2349421 None:intergenic 35.0%
!! AAGAACGATTTGTTTCTGTC+GGG - chr8_3:2349560-2349579 None:intergenic 35.0%
!! GAAGAACGATTTGTTTCTGT+CGG - chr8_3:2349561-2349580 None:intergenic 35.0%
TATTTCCGTGTTGAACAATG+TGG - chr8_3:2349621-2349640 None:intergenic 35.0%
CATTGTTCAACACGGAAATA+TGG + chr8_3:2349621-2349640 Msa1269140:CDS 35.0%
TATGGTCCATATTAGTTGCA+TGG + chr8_3:2349639-2349658 Msa1269140:CDS 35.0%
ATGGTCCATATTAGTTGCAT+GGG + chr8_3:2349640-2349659 Msa1269140:CDS 35.0%
GAGTATCTGTAATTGCTTTG+GGG - chr8_3:2349666-2349685 None:intergenic 35.0%
! GTGATACCTTCAGATCATTT+TGG + chr8_3:2349790-2349809 Msa1269140:CDS 35.0%
CCAAAACCAAAATGATCTGA+AGG - chr8_3:2349799-2349818 None:intergenic 35.0%
!!! CCTTCAGATCATTTTGGTTT+TGG + chr8_3:2349796-2349815 Msa1269140:CDS 35.0%
!!! TGGTTTTGGACAACTCAAAT+TGG + chr8_3:2349810-2349829 Msa1269140:CDS 35.0%
ATCGAACAATTTACTCCATG+TGG + chr8_3:2349932-2349951 Msa1269140:three_prime_UTR 35.0%
TCGAACAATTTACTCCATGT+GGG + chr8_3:2349933-2349952 Msa1269140:three_prime_UTR 35.0%
CAAATTCAATTATGCCCACA+TGG - chr8_3:2349950-2349969 None:intergenic 35.0%
!! ATTTAAACTTGTTGGAGCCT+CGG + chr8_3:2350079-2350098 Msa1269140:three_prime_UTR 35.0%
AACTAAACTAATTGTCACCG+AGG - chr8_3:2350099-2350118 None:intergenic 35.0%
ACCTCAAGAAGGGTTTGAAA+TGG + chr8_3:2346728-2346747 Msa1269140:CDS 40.0%
TCCATTTCAAACCCTTCTTG+AGG - chr8_3:2346732-2346751 None:intergenic 40.0%
GAAATGGAAAATCCCCCAAT+TGG + chr8_3:2346744-2346763 Msa1269140:CDS 40.0%
!! ACTTTCTAGGGTTCCAATTG+GGG - chr8_3:2346760-2346779 None:intergenic 40.0%
!! CACTTTCTAGGGTTCCAATT+GGG - chr8_3:2346761-2346780 None:intergenic 40.0%
!! TCACTTTCTAGGGTTCCAAT+TGG - chr8_3:2346762-2346781 None:intergenic 40.0%
AAATTCGATTGGATCCAACG+CGG + chr8_3:2346794-2346813 Msa1269140:CDS 40.0%
GTTGGCAGTTCCTATTTATC+AGG + chr8_3:2346902-2346921 Msa1269140:CDS 40.0%
CCAAAACCATGGCCTTTAAA+AGG - chr8_3:2347390-2347409 None:intergenic 40.0%
!! CCTTTTAAAGGCCATGGTTT+TGG + chr8_3:2347387-2347406 Msa1269140:intron 40.0%
GAAGGATGTAACATCAAACG+TGG + chr8_3:2347492-2347511 Msa1269140:intron 40.0%
!! AGGGTCAATTTGTTGGCATA+GGG + chr8_3:2347606-2347625 Msa1269140:intron 40.0%
!! AGAAAGACGGGTTTGTTGAA+TGG + chr8_3:2348097-2348116 Msa1269140:intron 40.0%
!!! CACTTTTTCATGGAGGGTAT+AGG + chr8_3:2348200-2348219 Msa1269140:intron 40.0%
! TTTTTGCTGATGTGTGACTG+TGG + chr8_3:2348701-2348720 Msa1269140:intron 40.0%
!! GCTTAGAGTTGATGATCACA+TGG + chr8_3:2348794-2348813 Msa1269140:intron 40.0%
!! TCCTTTTCTTTGGAAGGGAA+GGG - chr8_3:2349019-2349038 None:intergenic 40.0%
!! TTCCTTTTCTTTGGAAGGGA+AGG - chr8_3:2349020-2349039 None:intergenic 40.0%
TTCCCTTCCAAAGAAAAGGA+AGG + chr8_3:2349019-2349038 Msa1269140:intron 40.0%
!! CTCCTTCCTTTTCTTTGGAA+GGG - chr8_3:2349024-2349043 None:intergenic 40.0%
! TAGAGCTCCTTCCTTTTCTT+TGG - chr8_3:2349029-2349048 None:intergenic 40.0%
GTAGCCAGATAGAAAACCAA+AGG - chr8_3:2349082-2349101 None:intergenic 40.0%
TCAACATGCAAGCCTTTCAA+AGG + chr8_3:2349103-2349122 Msa1269140:intron 40.0%
CTAAATGTTGTGGCGAACTT+AGG + chr8_3:2349236-2349255 Msa1269140:CDS 40.0%
CTATGTGTTCAATGCCCATT+GGG + chr8_3:2349269-2349288 Msa1269140:CDS 40.0%
TATGAAAAGTAGCCACGAGA+AGG + chr8_3:2349387-2349406 Msa1269140:CDS 40.0%
TTCCAAAGCCTACATGTCTA+TGG - chr8_3:2349495-2349514 None:intergenic 40.0%
!! TTGTTTCTGTCGGGTGTTTA+AGG - chr8_3:2349551-2349570 None:intergenic 40.0%
CACAACCACATTGTTCAACA+CGG + chr8_3:2349613-2349632 Msa1269140:CDS 40.0%
CTCATTATGATGTCTTGGCT+AGG + chr8_3:2349683-2349702 Msa1269140:CDS 40.0%
ATCACAAGAAATCCAGCTGT+AGG - chr8_3:2349775-2349794 None:intergenic 40.0%
TTCAGTCTCCTACTCAATGA+AGG - chr8_3:2349992-2350011 None:intergenic 40.0%
CCAACGGAAAATGTCACCAT+CGG - chr8_3:2346591-2346610 None:intergenic 45.0%
! ATGGTGACATTTTCCGTTGG+TGG + chr8_3:2346591-2346610 Msa1269140:CDS 45.0%
!! CTTTCTAGGGTTCCAATTGG+GGG - chr8_3:2346759-2346778 None:intergenic 45.0%
AATTCGATTGGATCCAACGC+GGG + chr8_3:2346795-2346814 Msa1269140:CDS 45.0%
ATTATTCTGTTGTCCCGCGT+TGG - chr8_3:2346811-2346830 None:intergenic 45.0%
! CTTCATTTGCTCTGAACCGT+TGG + chr8_3:2346884-2346903 Msa1269140:CDS 45.0%
CAGTACAAGACACTGGGTTT+GGG - chr8_3:2347279-2347298 None:intergenic 45.0%
ACAGTACAAGACACTGGGTT+TGG - chr8_3:2347280-2347299 None:intergenic 45.0%
!! CATTGGATGTGGGTTTTGTG+TGG + chr8_3:2347351-2347370 Msa1269140:intron 45.0%
!! TACTCCCCTTTTAAAGGCCA+TGG + chr8_3:2347381-2347400 Msa1269140:intron 45.0%
CTGTGAGAGGGTCAATTTGT+TGG + chr8_3:2347599-2347618 Msa1269140:intron 45.0%
!! GAGGGTCAATTTGTTGGCAT+AGG + chr8_3:2347605-2347624 Msa1269140:intron 45.0%
GATGTTCTGTGATAAAGGGC+TGG + chr8_3:2348255-2348274 Msa1269140:intron 45.0%
GATCATCAACTCTAAGCACG+AGG - chr8_3:2348791-2348810 None:intergenic 45.0%
!! TTTTCTTTGGAAGGGAAGGG+CGG - chr8_3:2349016-2349035 None:intergenic 45.0%
! GCTCCTTCCTTTTCTTTGGA+AGG - chr8_3:2349025-2349044 None:intergenic 45.0%
!! CCAATGGGCATTGAACACAT+AGG - chr8_3:2349271-2349290 None:intergenic 45.0%
CCTATGTGTTCAATGCCCAT+TGG + chr8_3:2349268-2349287 Msa1269140:CDS 45.0%
CGACAACGATTGTACCCAAT+GGG - chr8_3:2349286-2349305 None:intergenic 45.0%
CCATTGGGTACAATCGTTGT+CGG + chr8_3:2349284-2349303 Msa1269140:CDS 45.0%
CATTGGGTACAATCGTTGTC+GGG + chr8_3:2349285-2349304 Msa1269140:CDS 45.0%
CCTGTATGTGGGCATTTACA+TGG - chr8_3:2349427-2349446 None:intergenic 45.0%
CCATGTAAATGCCCACATAC+AGG + chr8_3:2349424-2349443 Msa1269140:CDS 45.0%
CTACATGTCTATGGCTGAAG+TGG - chr8_3:2349486-2349505 None:intergenic 45.0%
CACTTCAGCCATAGACATGT+AGG + chr8_3:2349484-2349503 Msa1269140:CDS 45.0%
AGCCATAGACATGTAGGCTT+TGG + chr8_3:2349490-2349509 Msa1269140:CDS 45.0%
ATGTCTTGGCTAGGTCTCAA+GGG + chr8_3:2349692-2349711 Msa1269140:CDS 45.0%
!! GAAAGGTGCCTTCATTGAGT+AGG + chr8_3:2349981-2350000 Msa1269140:three_prime_UTR 45.0%
!!! TCATTTTTTTTTTAAAAAAA+AGG + chr8_3:2348490-2348509 Msa1269140:intron 5.0%
!! CATCGGTGGTTGTTTCTCGT+AGG - chr8_3:2346574-2346593 None:intergenic 50.0%
CTACGAGAAACAACCACCGA+TGG + chr8_3:2346572-2346591 Msa1269140:exon 50.0%
ACGGAAAATGTCACCATCGG+TGG - chr8_3:2346588-2346607 None:intergenic 50.0%
! CCGATGGTGACATTTTCCGT+TGG + chr8_3:2346588-2346607 Msa1269140:exon 50.0%
!! CGCTTCTGATTTGGGTTGCT+AGG - chr8_3:2346636-2346655 None:intergenic 50.0%
!! ACCCAAATCAGAAGCGTCGA+AGG + chr8_3:2346640-2346659 Msa1269140:CDS 50.0%
CCCTTCGACGCTTCTGATTT+GGG - chr8_3:2346644-2346663 None:intergenic 50.0%
!! CCCAAATCAGAAGCGTCGAA+GGG + chr8_3:2346641-2346660 Msa1269140:CDS 50.0%
ACCCTTCGACGCTTCTGATT+TGG - chr8_3:2346645-2346664 None:intergenic 50.0%
! CTGGGTTTGGGTTTGTGGAT+TGG - chr8_3:2347267-2347286 None:intergenic 50.0%
! AGACACTGGGTTTGGGTTTG+TGG - chr8_3:2347272-2347291 None:intergenic 50.0%
!!! TAAAGGCCATGGTTTTGGCG+TGG + chr8_3:2347392-2347411 Msa1269140:intron 50.0%
ATTCAGCCACGCCAAAACCA+TGG - chr8_3:2347401-2347420 None:intergenic 50.0%
!! TGGGGGTGTATGTGGTGTTT+TGG - chr8_3:2347440-2347459 None:intergenic 50.0%
! TGATTGGATGGGGGTGTATG+TGG - chr8_3:2347448-2347467 None:intergenic 50.0%
ACATCAAACGTGGGTCTGTG+TGG + chr8_3:2347502-2347521 Msa1269140:intron 50.0%
CCTGAAATGTGGCTGTGAGA+GGG + chr8_3:2347587-2347606 Msa1269140:intron 50.0%
! TTTCTTTGGAAGGGAAGGGC+GGG - chr8_3:2349015-2349034 None:intergenic 50.0%
GCCCTTCCCTTCCAAAGAAA+AGG + chr8_3:2349015-2349034 Msa1269140:intron 50.0%
CCGACAACGATTGTACCCAA+TGG - chr8_3:2349287-2349306 None:intergenic 50.0%
AAATGCCCACATACAGGCTG+CGG + chr8_3:2349430-2349449 Msa1269140:CDS 50.0%
GAAAACCGCAGCCTGTATGT+GGG - chr8_3:2349438-2349457 None:intergenic 50.0%
AGAAAACCGCAGCCTGTATG+TGG - chr8_3:2349439-2349458 None:intergenic 50.0%
! CGGTTTTCTTGCCTCATCCA+AGG + chr8_3:2349450-2349469 Msa1269140:CDS 50.0%
GAGAGCTAACTCCTTGGATG+AGG - chr8_3:2349464-2349483 None:intergenic 50.0%
GAAGTGGAGAGCTAACTCCT+TGG - chr8_3:2349470-2349489 None:intergenic 50.0%
TGGGGCCCATGCAACTAATA+TGG - chr8_3:2349648-2349667 None:intergenic 50.0%
GATGTCTTGGCTAGGTCTCA+AGG + chr8_3:2349691-2349710 Msa1269140:CDS 50.0%
! AATGGTGATGCTCCTACAGC+TGG + chr8_3:2349760-2349779 Msa1269140:CDS 50.0%
! CGTGGGTCTGTGTGGTGTTT+TGG + chr8_3:2347510-2347529 Msa1269140:intron 55.0%
GCCTGAAATGTGGCTGTGAG+AGG + chr8_3:2347586-2347605 Msa1269140:intron 55.0%
CCCTCTCACAGCCACATTTC+AGG - chr8_3:2347590-2347609 None:intergenic 55.0%
! TTCTTTGGAAGGGAAGGGCG+GGG - chr8_3:2349014-2349033 None:intergenic 55.0%
GTACAATCGTTGTCGGGCTG+TGG + chr8_3:2349291-2349310 Msa1269140:CDS 55.0%
!! AAGCGTCGAAGGGTTGACGC+CGG + chr8_3:2346651-2346670 Msa1269140:CDS 60.0%
TGCTGCTGCGACTTCTTCGC+CGG - chr8_3:2346673-2346692 None:intergenic 60.0%
! TCTTTGGAAGGGAAGGGCGG+GGG - chr8_3:2349013-2349032 None:intergenic 60.0%
TCGGGCTGTGGAGAAGTTGC+TGG + chr8_3:2349303-2349322 Msa1269140:CDS 60.0%
!! TCCGTTGGTGGCTGCGACGA+CGG + chr8_3:2346603-2346622 Msa1269140:CDS 65.0%
ACCGTCGTCGCAGCCACCAA+CGG - chr8_3:2346607-2346626 None:intergenic 65.0%
GGTGGCTGCGACGACGGTGA+AGG + chr8_3:2346609-2346628 Msa1269140:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 2346456 2350179 2346456 ID=Msa1269140;Name=Msa1269140
chr8_3 mRNA 2346456 2350179 2346456 ID=Msa1269140-mRNA-1;Parent=Msa1269140;Name=Msa1269140-mRNA-1;_AED=0.00;_eAED=0.00;_QI=135|1|1|1|1|1|2|324|325
chr8_3 exon 2346456 2346923 2346456 ID=Msa1269140-mRNA-1:exon:696;Parent=Msa1269140-mRNA-1
chr8_3 exon 2349211 2350179 2349211 ID=Msa1269140-mRNA-1:exon:697;Parent=Msa1269140-mRNA-1
chr8_3 five_prime_UTR 2346456 2346590 2346456 ID=Msa1269140-mRNA-1:five_prime_utr;Parent=Msa1269140-mRNA-1
chr8_3 CDS 2346591 2346923 2346591 ID=Msa1269140-mRNA-1:cds;Parent=Msa1269140-mRNA-1
chr8_3 CDS 2349211 2349855 2349211 ID=Msa1269140-mRNA-1:cds;Parent=Msa1269140-mRNA-1
chr8_3 three_prime_UTR 2349856 2350179 2349856 ID=Msa1269140-mRNA-1:three_prime_utr;Parent=Msa1269140-mRNA-1
Gene Sequence

>Msa1269140

ATGGTGACATTTTCCGTTGGTGGCTGCGACGACGGTGAAGGACCTAGCAACCCAAATCAGAAGCGTCGAAGGGTTGACGCCGGCGAAGAAGTCGCAGCAGCAACAACTACAAGAGAAGAAGAAGAAGAAAATCAACAACCTCAAGAAGGGTTTGAAATGGAAAATCCCCCAATTGGAACCCTAGAAAGTGATGCAAATGAAGGAAATTCGATTGGATCCAACGCGGGACAACAGAATAATGATCTGAGTAAGAAGATTTCTGCTATCATTTCTGATCCTGATGTTCTTGATTGCTTCATTTGCTCTGAACCGTTGGCAGTTCCTATTTATCAGTGTGAGAATGGGCATATTGCTTGCTCTAAATGTTGTGGCGAACTTAGGAACAAATGTCCTATGTGTTCAATGCCCATTGGGTACAATCGTTGTCGGGCTGTGGAGAAGTTGCTGGAATCTATTAAAATATCATGCCCAAATGCAAAATATGGCTGCAAAGATATGTTTAGTTGCAGTATGAAAAGTAGCCACGAGAAGGAATGCATATATATACCATGTAAATGCCCACATACAGGCTGCGGTTTTCTTGCCTCATCCAAGGAGTTAGCTCTCCACTTCAGCCATAGACATGTAGGCTTTGGAATACAGTTTACCTATGACAAATTTATTTCTGTCTCCTTAAACACCCGACAGAAACAAATCGTTCTTCTAGATCAAAATGACGCAAGATTGTTTATTGTTCACAACCACATTGTTCAACACGGAAATATGGTCCATATTAGTTGCATGGGCCCCAAAGCAATTACAGATACTCATTATGATGTCTTGGCTAGGTCTCAAGGGAGCACATTAATATTGCAATCTTCTATGAAGACCATTCAAGACAATAATGGTGATGCTCCTACAGCTGGATTTCTTGTGATACCTTCAGATCATTTTGGTTTTGGACAACTCAAATTGGATATTCGTATAAAGTCTCACTAA
Protein sequence

>Msa1269140

MVTFSVGGCDDGEGPSNPNQKRRRVDAGEEVAAATTTREEEEENQQPQEGFEMENPPIGTLESDANEGNSIGSNAGQQNNDLSKKISAIISDPDVLDCFICSEPLAVPIYQCENGHIACSKCCGELRNKCPMCSMPIGYNRCRAVEKLLESIKISCPNAKYGCKDMFSCSMKSSHEKECIYIPCKCPHTGCGFLASSKELALHFSHRHVGFGIQFTYDKFISVSLNTRQKQIVLLDQNDARLFIVHNHIVQHGNMVHISCMGPKAITDTHYDVLARSQGSTLILQSSMKTIQDNNGDAPTAGFLVIPSDHFGFGQLKLDIRIKSH*