Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270670 | XP_013444249.1 | 93.241 | 577 | 14 | 1 | 1 | 552 | 82 | 658 | 0.0 | 1100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270670 | sp|A0MFS9|CACLC_ARATH | 67.043 | 531 | 175 | 0 | 10 | 540 | 116 | 646 | 0.0 | 732 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270670 | A0A072TM33 | 93.241 | 577 | 14 | 1 | 1 | 552 | 82 | 658 | 0.0 | 1100 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1270670 | Msa1270740 | 0.806701 | 7.238404e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270670 | MtrunA17_Chr8g0341491 | 93.241 | 577 | 14 | 1 | 1 | 552 | 82 | 658 | 0.0 | 1100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270670 | AT1G73020.2 | 67.043 | 531 | 175 | 0 | 10 | 540 | 116 | 646 | 0.0 | 732 |
| Msa1270670 | AT1G73020.3 | 67.043 | 531 | 175 | 0 | 10 | 540 | 116 | 646 | 0.0 | 732 |
| Msa1270670 | AT1G73020.1 | 67.043 | 531 | 175 | 0 | 10 | 540 | 116 | 646 | 0.0 | 732 |
Find 146 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACGAGATTTATTCATATTA+TGG | 0.135999 | 8_3:-4009129 | Msa1270670:CDS |
| AGGGAGAAATTTATATATTT+TGG | 0.147628 | 8_3:-4004999 | Msa1270670:three_prime_UTR |
| TATCAGTCTCAAATACTTTA+AGG | 0.166767 | 8_3:+4008514 | None:intergenic |
| GCACATCTTTATGAAGTTAT+TGG | 0.195132 | 8_3:-4008369 | Msa1270670:CDS |
| TCAAAATTACTAGCAGCTTT+AGG | 0.206658 | 8_3:+4006734 | None:intergenic |
| AGCCTGGCTTAACATATTTC+AGG | 0.220405 | 8_3:-4006677 | Msa1270670:intron |
| CAAAATTACTAGCAGCTTTA+GGG | 0.255166 | 8_3:+4006735 | None:intergenic |
| GGAGAATCTGATTCAGAAAT+TGG | 0.260982 | 8_3:-4009352 | Msa1270670:CDS |
| GAGCTTTCTTTCTCTCTTGC+TGG | 0.268545 | 8_3:+4005204 | None:intergenic |
| ACATTTCAGGTCAATGAAAT+TGG | 0.278094 | 8_3:-4008828 | Msa1270670:intron |
| GTGATAACCCTTAAATTTGA+TGG | 0.281352 | 8_3:-4009399 | Msa1270670:CDS |
| TCAGGACTTGGGCTCTTCAT+TGG | 0.287955 | 8_3:-4009176 | Msa1270670:CDS |
| GAAACGGCAACATGTGTCTT+TGG | 0.299613 | 8_3:+4011275 | None:intergenic |
| CTGTTCTTCCTCGCTGCATT+TGG | 0.300310 | 8_3:-4008963 | Msa1270670:CDS |
| TGTTTAGTTGGCTGCACCTT+TGG | 0.306722 | 8_3:-4010048 | Msa1270670:intron |
| ATTTCTATATTTACAATTAG+TGG | 0.307611 | 8_3:+4005120 | None:intergenic |
| TTTGTAGTTGAAAGAATTAT+TGG | 0.312859 | 8_3:-4010804 | Msa1270670:five_prime_UTR |
| CATTGCTGATGAGTTCATTA+AGG | 0.313378 | 8_3:-4010781 | Msa1270670:intron |
| CTTTGTAGTGGTGATACTTT+GGG | 0.318535 | 8_3:-4008789 | Msa1270670:CDS |
| ACGAGATTTATTCATATTAT+GGG | 0.322739 | 8_3:-4009128 | Msa1270670:CDS |
| CTTGAAGATGGGTTATTTGA+TGG | 0.331640 | 8_3:-4007412 | Msa1270670:intron |
| ATTCAGTATATTACTAAGAT+TGG | 0.333183 | 8_3:-4008059 | Msa1270670:CDS |
| GGACAATCTCCGGAGGAAAA+AGG | 0.338704 | 8_3:-4005297 | Msa1270670:CDS |
| CACAAGAAGAAGAGAGAAAA+GGG | 0.353109 | 8_3:-4007520 | Msa1270670:CDS |
| GACTTTCTTCTGCAGGTGTT+TGG | 0.357617 | 8_3:-4007878 | Msa1270670:intron |
| ATTGAGGAATTTAAGAAGGT+TGG | 0.364963 | 8_3:-4010828 | Msa1270670:five_prime_UTR |
| TTTCAGAGATATGAGTGGTT+AGG | 0.374938 | 8_3:-4008471 | Msa1270670:CDS |
| TTCTGTTCAGAACAACATAA+TGG | 0.375005 | 8_3:-4006773 | Msa1270670:intron |
| AAAGAAATCCATTGGGAAAC+CGG | 0.378070 | 8_3:-4009375 | Msa1270670:CDS |
| TACATTTAAGCCGTAGGAAA+TGG | 0.379947 | 8_3:+4005161 | None:intergenic |
| CTCTTCTTTAACAACAAAAC+AGG | 0.386646 | 8_3:+4010970 | None:intergenic |
| TTAGAGTTGGCGTTGCAGTT+TGG | 0.388357 | 8_3:-4007192 | Msa1270670:CDS |
| GGATCTTTCTTCCATCCATT+TGG | 0.388858 | 8_3:-4010993 | Msa1270670:five_prime_UTR |
| TAAGTTCGGTTTCGCTCGCT+TGG | 0.389691 | 8_3:-4005673 | Msa1270670:CDS |
| TCTTTGTAGTGGTGATACTT+TGG | 0.393188 | 8_3:-4008790 | Msa1270670:CDS |
| ATGCCAACTCGAAAGGTAAC+TGG | 0.397966 | 8_3:+4008394 | None:intergenic |
| CTCCCTGGAATCTTGTATCC+TGG | 0.415557 | 8_3:+4008570 | None:intergenic |
| TTTCAGAGAGGGATTGAATT+GGG | 0.415769 | 8_3:+4011065 | None:intergenic |
| TGGCAGAGTAAGAAGGCTTT+AGG | 0.420741 | 8_3:+4007449 | None:intergenic |
| TTTGAGACTGATAGAGCAAA+AGG | 0.421938 | 8_3:-4008504 | Msa1270670:CDS |
| TTGAGGAATTTAAGAAGGTT+GGG | 0.422125 | 8_3:-4010827 | Msa1270670:five_prime_UTR |
| GACTTGGGCTCTTCATTGGT+GGG | 0.423694 | 8_3:-4009172 | Msa1270670:CDS |
| CTTAAATGTATATTAACAAA+GGG | 0.429831 | 8_3:-4005148 | Msa1270670:three_prime_UTR |
| AGAACAACATAATGGAAATC+AGG | 0.432759 | 8_3:-4006765 | Msa1270670:CDS |
| CCGCTGCGACCGTAGGAGCC+TGG | 0.434938 | 8_3:-4006693 | Msa1270670:CDS |
| ATCACCACTACAAAGAAAAC+AGG | 0.436448 | 8_3:+4008797 | None:intergenic |
| ATAAAGAAACGGACTCATAT+AGG | 0.442057 | 8_3:-4009993 | Msa1270670:intron |
| TTCAAGCTCCTCGCCAATGC+TGG | 0.443060 | 8_3:+4007429 | None:intergenic |
| GATCCAGGATACAAGATTCC+AGG | 0.444234 | 8_3:-4008573 | Msa1270670:CDS |
| AAGCAAGTGTTTCCTTTACA+TGG | 0.446190 | 8_3:-4009312 | Msa1270670:intron |
| GGACTTGGGCTCTTCATTGG+TGG | 0.446678 | 8_3:-4009173 | Msa1270670:CDS |
| TTCAGAGATATGAGTGGTTA+GGG | 0.447927 | 8_3:-4008470 | Msa1270670:CDS |
| GCTGCACCTTTGGAGACATT+AGG | 0.449883 | 8_3:-4010038 | Msa1270670:five_prime_UTR |
| AGGTATGGATTTACAATTTG+AGG | 0.452054 | 8_3:-4009837 | Msa1270670:exon |
| ACACAAGAAGAAGAGAGAAA+AGG | 0.452812 | 8_3:-4007521 | Msa1270670:CDS |
| TATTACTAAGATTGGAGGTC+AGG | 0.457305 | 8_3:-4008051 | Msa1270670:CDS |
| TTGATGGAAAAGAAATCCAT+TGG | 0.460719 | 8_3:-4009383 | Msa1270670:CDS |
| TTATAGCTGTACTTGAGATA+AGG | 0.461949 | 8_3:+4007648 | None:intergenic |
| ATTGGCGAGGAGCTTGAAGA+TGG | 0.472540 | 8_3:-4007424 | Msa1270670:CDS |
| GTCGCAGCGGCACGAGGGAC+AGG | 0.476355 | 8_3:+4006706 | None:intergenic |
| GAAAGAAACTTCTCAGGACT+TGG | 0.477414 | 8_3:-4009188 | Msa1270670:CDS |
| AGGGAACTTCCCTTCCTCCC+TGG | 0.477589 | 8_3:+4008555 | None:intergenic |
| ATCAAAATTGCAGCAAGTCC+AGG | 0.477899 | 8_3:+4005720 | None:intergenic |
| TTAATATACATTTAAGCCGT+AGG | 0.478176 | 8_3:+4005155 | None:intergenic |
| CCTTCTTACTCTGCCAGCAT+TGG | 0.481246 | 8_3:-4007442 | Msa1270670:CDS |
| TATATGATGAGGAAGGGAAA+TGG | 0.482763 | 8_3:-4005752 | Msa1270670:CDS |
| AACCGAACTTAATCAACAAA+AGG | 0.483244 | 8_3:+4005685 | None:intergenic |
| GCTTGGTTATATGATGAGGA+AGG | 0.484436 | 8_3:-4005759 | Msa1270670:CDS |
| TAACAACAAAACAGGCCAAA+TGG | 0.485639 | 8_3:+4010978 | None:intergenic |
| GGTTGCAGATTTCTTAGAGT+TGG | 0.489805 | 8_3:-4007205 | Msa1270670:intron |
| GAGGACTGTGTTCAAAGAAA+CGG | 0.492491 | 8_3:+4011259 | None:intergenic |
| GAGTTCCATTGGTGGCTGTA+GGG | 0.492569 | 8_3:+4008536 | None:intergenic |
| TTTACAATTTGAGGTGGAAG+AGG | 0.493377 | 8_3:-4009828 | Msa1270670:CDS |
| AATACTTTAAGGAGTTCCAT+TGG | 0.496493 | 8_3:+4008525 | None:intergenic |
| AAAATTCAGCACTTCTAGCC+AGG | 0.496871 | 8_3:-4008736 | Msa1270670:intron |
| AAGAAATCCATTGGGAAACC+GGG | 0.497126 | 8_3:-4009374 | Msa1270670:CDS |
| AGACTAGAAAGAAACTTCTC+AGG | 0.497960 | 8_3:-4009194 | Msa1270670:CDS |
| CCTCGTGCCGCTGCGACCGT+AGG | 0.498400 | 8_3:-4006700 | Msa1270670:CDS |
| TTGTGCTTATGTTCTTATTG+AGG | 0.501170 | 8_3:-4010844 | Msa1270670:five_prime_UTR |
| GATTCAGCGGCTCCTTCTGT+CGG | 0.502462 | 8_3:-4007774 | Msa1270670:CDS |
| CTGAATTACAAATAAAGAAA+CGG | 0.509364 | 8_3:-4010004 | Msa1270670:five_prime_UTR |
| CGGTTCGCTCTTACCCAAGC+AGG | 0.514922 | 8_3:+4005370 | None:intergenic |
| TCTTATTGAGGAATTTAAGA+AGG | 0.516820 | 8_3:-4010832 | Msa1270670:five_prime_UTR |
| TACAAGATTCCAGGGAGGAA+GGG | 0.519355 | 8_3:-4008564 | Msa1270670:CDS |
| GAGGATAATTTCAAAGAAAG+TGG | 0.520387 | 8_3:+4011126 | None:intergenic |
| TGATGGAAAAGAAATCCATT+GGG | 0.521212 | 8_3:-4009382 | Msa1270670:CDS |
| CCTACGGTCGCAGCGGCACG+AGG | 0.522515 | 8_3:+4006700 | None:intergenic |
| TATGTTAAGCCAGGCTCCTA+CGG | 0.524156 | 8_3:+4006684 | None:intergenic |
| CCAAGCTAAAAGAGCACAGT+TGG | 0.526575 | 8_3:+4005776 | None:intergenic |
| TATGAATAAATCTCGTCGAT+TGG | 0.529512 | 8_3:+4009135 | None:intergenic |
| GTCCGACAGCTTGGTCTACA+AGG | 0.535937 | 8_3:-4007979 | Msa1270670:intron |
| ATACAAGATTCCAGGGAGGA+AGG | 0.539373 | 8_3:-4008565 | Msa1270670:CDS |
| AAATTGGGGTGGTGATTCCA+AGG | 0.539526 | 8_3:-4010899 | Msa1270670:five_prime_UTR |
| TACCTGAAATATGTTAAGCC+AGG | 0.540655 | 8_3:+4006675 | None:intergenic |
| CAGTATATTACTAAGATTGG+AGG | 0.541175 | 8_3:-4008056 | Msa1270670:CDS |
| CGAGATTTATTCATATTATG+GGG | 0.541506 | 8_3:-4009127 | Msa1270670:CDS |
| AATCTTAGTAATATACTGAA+TGG | 0.542216 | 8_3:+4008061 | None:intergenic |
| GGAGTTCCATTGGTGGCTGT+AGG | 0.546133 | 8_3:+4008535 | None:intergenic |
| TCTCCAGTTACCTTTCGAGT+TGG | 0.547765 | 8_3:-4008397 | Msa1270670:CDS |
| TCTGCAGTTACAGTTGATCC+AGG | 0.552105 | 8_3:-4008588 | Msa1270670:CDS |
| TAACGAGTCAAATGAAAATG+AGG | 0.556866 | 8_3:+4011107 | None:intergenic |
| AACAAAACAGGCCAAATGGA+TGG | 0.558953 | 8_3:+4010982 | None:intergenic |
| GATTCTCCCCGGTTTCCCAA+TGG | 0.559213 | 8_3:+4009367 | None:intergenic |
| TTTAGCTTGGTTATATGATG+AGG | 0.560422 | 8_3:-4005763 | Msa1270670:CDS |
| GCTTAAATGTATATTAACAA+AGG | 0.563040 | 8_3:-4005149 | Msa1270670:three_prime_UTR |
| TCAGCGGCTCCTTCTGTCGG+AGG | 0.563483 | 8_3:-4007771 | Msa1270670:intron |
| ACTTTAAGGAGTTCCATTGG+TGG | 0.568656 | 8_3:+4008528 | None:intergenic |
| TTATTCATATTATGGGGCAA+AGG | 0.569333 | 8_3:-4009121 | Msa1270670:intron |
| CTTGGTTATATGATGAGGAA+GGG | 0.569347 | 8_3:-4005758 | Msa1270670:CDS |
| GCAGCAAAAGCAAATGCAGG+TGG | 0.573022 | 8_3:+4007141 | None:intergenic |
| GAGAGAAAGAAAGCTCAACC+TGG | 0.580193 | 8_3:-4005197 | Msa1270670:three_prime_UTR |
| TATGGATTTACAATTTGAGG+TGG | 0.581553 | 8_3:-4009834 | Msa1270670:CDS |
| TTTCGCTCGCTTGGTTCCTG+AGG | 0.583346 | 8_3:-4005664 | Msa1270670:intron |
| TTTCTGAATCAGATTCTCCC+CGG | 0.584756 | 8_3:+4009356 | None:intergenic |
| TTACTCTGCCAGCATTGGCG+AGG | 0.585566 | 8_3:-4007437 | Msa1270670:CDS |
| ACTGTAACTGCAGAGCTAAG+AGG | 0.588224 | 8_3:+4008597 | None:intergenic |
| GAAAAGCAACCTCCGACAGA+AGG | 0.592017 | 8_3:+4007762 | None:intergenic |
| TTCAAAATGTCAATGAAACA+AGG | 0.592382 | 8_3:-4005082 | Msa1270670:three_prime_UTR |
| TTGAGACTGATAGAGCAAAA+GGG | 0.597743 | 8_3:-4008503 | Msa1270670:CDS |
| ATCCAGGATACAAGATTCCA+GGG | 0.600089 | 8_3:-4008572 | Msa1270670:CDS |
| CCAATGCTGGCAGAGTAAGA+AGG | 0.601098 | 8_3:+4007442 | None:intergenic |
| TGTGCGTATGCCAACTCGAA+AGG | 0.603218 | 8_3:+4008387 | None:intergenic |
| AAGTTCCCTACAGCCACCAA+TGG | 0.605106 | 8_3:-4008541 | Msa1270670:CDS |
| TTGGCGAGGAGCTTGAAGAT+GGG | 0.605576 | 8_3:-4007423 | Msa1270670:CDS |
| ACAGCAGCAAAAGCAAATGC+AGG | 0.605767 | 8_3:+4007138 | None:intergenic |
| AGATTCTCACTTATATACAT+CGG | 0.606184 | 8_3:+4008344 | None:intergenic |
| AAAGAAACTTCTCAGGACTT+GGG | 0.607875 | 8_3:-4009187 | Msa1270670:CDS |
| ACGACGAGGATCTAAGTTCG+AGG | 0.609641 | 8_3:+4011231 | None:intergenic |
| GAAACACACTACACAGGCAC+AGG | 0.612385 | 8_3:-4005344 | Msa1270670:CDS |
| GACTGATAGAGCAAAAGGGA+AGG | 0.612724 | 8_3:-4008499 | Msa1270670:CDS |
| CCAGGCTCCTACGGTCGCAG+CGG | 0.622576 | 8_3:+4006693 | None:intergenic |
| GGGAAATGGAAAGTAGAACC+TGG | 0.631443 | 8_3:-4005738 | Msa1270670:CDS |
| GCTCTTCCTAATGTCTCCAA+AGG | 0.631860 | 8_3:+4010032 | None:intergenic |
| CCTGTGTAGTGTGTTTCGCA+CGG | 0.632858 | 8_3:+4005350 | None:intergenic |
| TGAAAAGTTACGATGCAACA+AGG | 0.641011 | 8_3:+4007814 | None:intergenic |
| CAGCAAAAGCAAATGCAGGT+GGG | 0.641926 | 8_3:+4007142 | None:intergenic |
| TTAAATGTATATTAACAAAG+GGG | 0.643984 | 8_3:-4005147 | Msa1270670:three_prime_UTR |
| AAGTATTTCAGAGATATGAG+TGG | 0.649385 | 8_3:-4008476 | Msa1270670:CDS |
| TTCTTGGAATGTACACACGA+TGG | 0.651810 | 8_3:-4008986 | Msa1270670:CDS |
| AGAAATCCATTGGGAAACCG+GGG | 0.657984 | 8_3:-4009373 | Msa1270670:CDS |
| CACCTTGTAGACCAAGCTGT+CGG | 0.660694 | 8_3:+4007977 | None:intergenic |
| CCGTGCGAAACACACTACAC+AGG | 0.669417 | 8_3:-4005350 | Msa1270670:CDS |
| CTACGGTCGCAGCGGCACGA+GGG | 0.695897 | 8_3:+4006701 | None:intergenic |
| ATGTAAGTCCAAATGCAGCG+AGG | 0.736838 | 8_3:+4008955 | None:intergenic |
| AAACATGGAAATATACGACG+AGG | 0.747162 | 8_3:+4011217 | None:intergenic |
| CAGGATACAAGATTCCAGGG+AGG | 0.783484 | 8_3:-4008569 | Msa1270670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATAAAAATAACCAT+AGG | + | chr8_3:4008310-4008329 | None:intergenic | 10.0% |
| !! | AAGATAAATTAATTACTTAA+TGG | + | chr8_3:4008689-4008708 | None:intergenic | 10.0% |
| !!! | CATTTTATTATTTATTTTGA+AGG | - | chr8_3:4011222-4011241 | Msa1270670:five_prime_UTR | 10.0% |
| !! | AAAAAAAACACTAAAAACAT+CGG | + | chr8_3:4005073-4005092 | None:intergenic | 15.0% |
| !!! | TATGTATTATGAAGTAATTT+TGG | - | chr8_3:4005606-4005625 | Msa1270670:intron | 15.0% |
| !!! | ACAAGAATTTTCTTTATATT+AGG | - | chr8_3:4005693-4005712 | Msa1270670:CDS | 15.0% |
| !! | TATCTAAACTAATAAACTAT+TGG | - | chr8_3:4005945-4005964 | Msa1270670:intron | 15.0% |
| !! | CTTAAACATAAAATTGTATT+AGG | + | chr8_3:4006314-4006333 | None:intergenic | 15.0% |
| !! | AAAAAAAAAATACCATGTAA+AGG | + | chr8_3:4006944-4006963 | None:intergenic | 15.0% |
| !! | TAATAAATCATATAATCATC+AGG | + | chr8_3:4007394-4007413 | None:intergenic | 15.0% |
| !! | TATATGATTTATTACATTTC+AGG | - | chr8_3:4007400-4007419 | Msa1270670:intron | 15.0% |
| !! | ATATTAAATTCTTGAACAAA+TGG | - | chr8_3:4008888-4008907 | Msa1270670:intron | 15.0% |
| !!! | ATAGATCATTTACTTTTAAT+TGG | - | chr8_3:4010253-4010272 | Msa1270670:intron | 15.0% |
| !! | ATGGAAATGAATTATTAATT+TGG | + | chr8_3:4010630-4010649 | None:intergenic | 15.0% |
| !! | CTTAAATGTATATTAACAAA+GGG | - | chr8_3:4011093-4011112 | Msa1270670:five_prime_UTR | 15.0% |
| !! | TTAAATGTATATTAACAAAG+GGG | - | chr8_3:4011094-4011113 | Msa1270670:five_prime_UTR | 15.0% |
| !! | ATTTCTATATTTACAATTAG+TGG | + | chr8_3:4011124-4011143 | None:intergenic | 15.0% |
| !! | TAAAAACATCGGTAAAAAAA+AGG | + | chr8_3:4005062-4005081 | None:intergenic | 20.0% |
| !!! | GAAAAAATTCTCCATTTTTA+TGG | - | chr8_3:4005195-4005214 | Msa1270670:three_prime_UTR | 20.0% |
| !! | TTTGTAGTTGAAAGAATTAT+TGG | - | chr8_3:4005437-4005456 | Msa1270670:intron | 20.0% |
| !! | TGAACTTTCTTTCTATATAA+GGG | + | chr8_3:4005518-4005537 | None:intergenic | 20.0% |
| !! | ATGAACTTTCTTTCTATATA+AGG | + | chr8_3:4005519-4005538 | None:intergenic | 20.0% |
| !! | TACATAAATATCATCCAATA+TGG | + | chr8_3:4005592-4005611 | None:intergenic | 20.0% |
| !! | CTATTGGCATAATTAAAAAA+GGG | + | chr8_3:4005666-4005685 | None:intergenic | 20.0% |
| !! | TCTATTGGCATAATTAAAAA+AGG | + | chr8_3:4005667-4005686 | None:intergenic | 20.0% |
| !!! | TTTTTAATTATGCCAATAGA+AGG | - | chr8_3:4005667-4005686 | Msa1270670:CDS | 20.0% |
| !!! | TTTTAATTATGCCAATAGAA+GGG | - | chr8_3:4005668-4005687 | Msa1270670:CDS | 20.0% |
| !! | CTGAATTACAAATAAAGAAA+CGG | - | chr8_3:4006237-4006256 | Msa1270670:intron | 20.0% |
| !!! | AATAAGTTGAAAATAGCTTA+TGG | - | chr8_3:4006658-4006677 | Msa1270670:intron | 20.0% |
| !!! | AACTTTTATTTTGAATTTGC+AGG | - | chr8_3:4006802-4006821 | Msa1270670:intron | 20.0% |
| !!! | TTCTTTTCCATCAAATTTAA+GGG | + | chr8_3:4006852-4006871 | None:intergenic | 20.0% |
| !!! | TTTCTTTTCCATCAAATTTA+AGG | + | chr8_3:4006853-4006872 | None:intergenic | 20.0% |
| !! | TAAATCTAGAGAAAATTTGA+AGG | + | chr8_3:4006979-4006998 | None:intergenic | 20.0% |
| !! | ACGAGATTTATTCATATTAT+GGG | - | chr8_3:4007113-4007132 | Msa1270670:intron | 20.0% |
| !!! | ACTTACTTTTTACTTCTTTT+CGG | - | chr8_3:4007546-4007565 | Msa1270670:intron | 20.0% |
| !!! | CTTTTTTTGCAATAAATTTC+TGG | - | chr8_3:4007979-4007998 | Msa1270670:intron | 20.0% |
| !! | AACCCAAATAATTAAAGTAA+GGG | + | chr8_3:4008128-4008147 | None:intergenic | 20.0% |
| !! | AATCTTAGTAATATACTGAA+TGG | + | chr8_3:4008183-4008202 | None:intergenic | 20.0% |
| !! | ATTCAGTATATTACTAAGAT+TGG | - | chr8_3:4008182-4008201 | Msa1270670:intron | 20.0% |
| !! | AATGAATTAAGCGTTATTAT+TGG | + | chr8_3:4009352-4009371 | None:intergenic | 20.0% |
| !! | TAATCATCAACAATATAAAG+TGG | + | chr8_3:4009642-4009661 | None:intergenic | 20.0% |
| !!! | ACTTTATATTGTTGATGATT+AGG | - | chr8_3:4009641-4009660 | Msa1270670:intron | 20.0% |
| !!! | ATTTTACATAGTAGCTTATT+TGG | + | chr8_3:4009679-4009698 | None:intergenic | 20.0% |
| !! | TCATCAATTGAAACTTAAAA+AGG | + | chr8_3:4009731-4009750 | None:intergenic | 20.0% |
| !!! | TTTTAAGTTTCAATTGATGA+AGG | - | chr8_3:4009731-4009750 | Msa1270670:intron | 20.0% |
| !!! | TTTAAGTTTCAATTGATGAA+GGG | - | chr8_3:4009732-4009751 | Msa1270670:intron | 20.0% |
| !! | ATGATCTATATTTAGACTTA+TGG | + | chr8_3:4010242-4010261 | None:intergenic | 20.0% |
| !! | AAAAAACCTGGTTAAAATAT+GGG | + | chr8_3:4010767-4010786 | None:intergenic | 20.0% |
| !! | TAAAAAACCTGGTTAAAATA+TGG | + | chr8_3:4010768-4010787 | None:intergenic | 20.0% |
| !! | GCTTAAATGTATATTAACAA+AGG | - | chr8_3:4011092-4011111 | Msa1270670:five_prime_UTR | 20.0% |
| !!! | AGGGAGAAATTTATATATTT+TGG | - | chr8_3:4011242-4011261 | Msa1270670:five_prime_UTR | 20.0% |
| ! | TTATGGAAATGCCATAAAAA+TGG | + | chr8_3:4005209-4005228 | None:intergenic | 25.0% |
| !! | TGTTAAAGAAGAGATTTTGT+TGG | - | chr8_3:4005281-4005300 | Msa1270670:CDS | 25.0% |
| !! | GTTAAAGAAGAGATTTTGTT+GGG | - | chr8_3:4005282-4005301 | Msa1270670:CDS | 25.0% |
| !! | ATTTTGTTGGGAAAAATGAA+TGG | - | chr8_3:4005294-4005313 | Msa1270670:CDS | 25.0% |
| !!! | AAGAAGCTGTTTTTGAAATT+GGG | - | chr8_3:4005327-4005346 | Msa1270670:CDS | 25.0% |
| !! | TTTTCTTGTATAATTCTCCT+TGG | + | chr8_3:4005362-4005381 | None:intergenic | 25.0% |
| ! | TCTTATTGAGGAATTTAAGA+AGG | - | chr8_3:4005409-4005428 | Msa1270670:intron | 25.0% |
| ! | GAACTTTCTTTCTATATAAG+GGG | + | chr8_3:4005517-4005536 | None:intergenic | 25.0% |
| ! | TATATGTTTACGTTCCATAT+TGG | - | chr8_3:4005575-4005594 | Msa1270670:intron | 25.0% |
| ! | TTCTTTATATTAGGCATGTT+TGG | - | chr8_3:4005702-4005721 | Msa1270670:CDS | 25.0% |
| ! | AATTGTGTAATTACAAGTGT+CGG | + | chr8_3:4005837-4005856 | None:intergenic | 25.0% |
| ! | TTCATAGACTCTTATCATAT+AGG | - | chr8_3:4005917-4005936 | Msa1270670:intron | 25.0% |
| ! | TCATAGACTCTTATCATATA+GGG | - | chr8_3:4005918-4005937 | Msa1270670:intron | 25.0% |
| ! | TAGCTTATAGAGATACAATT+TGG | + | chr8_3:4005993-4006012 | None:intergenic | 25.0% |
| ! | ATTGTATCTCTATAAGCTAT+AGG | - | chr8_3:4005994-4006013 | Msa1270670:intron | 25.0% |
| !! | TGTCTAATTTAAGCTTTTTG+TGG | - | chr8_3:4006147-4006166 | Msa1270670:intron | 25.0% |
| ! | TAAGTTCATGTTGTAAAATG+TGG | - | chr8_3:4006330-4006349 | Msa1270670:intron | 25.0% |
| !!! | CTTTGTTTAGCTTTTGTTAT+AGG | + | chr8_3:4006577-4006596 | None:intergenic | 25.0% |
| ! | TTCATAATAGTCATGTCAAT+AGG | + | chr8_3:4006741-4006760 | None:intergenic | 25.0% |
| ! | TTGACATGACTATTATGAAA+CGG | - | chr8_3:4006742-4006761 | Msa1270670:CDS | 25.0% |
| ! | AAAGTTAAAGACATGTCAAT+AGG | + | chr8_3:4006788-4006807 | None:intergenic | 25.0% |
| ! | GACGAGATTTATTCATATTA+TGG | - | chr8_3:4007112-4007131 | Msa1270670:intron | 25.0% |
| ! | CGAGATTTATTCATATTATG+GGG | - | chr8_3:4007114-4007133 | Msa1270670:intron | 25.0% |
| !! | ATTATCATTTTCATATCGTG+CGG | + | chr8_3:4007168-4007187 | None:intergenic | 25.0% |
| !!! | CATTGCAATTGATTGATTTT+AGG | - | chr8_3:4007306-4007325 | Msa1270670:intron | 25.0% |
| !!! | CTTACTTTTTACTTCTTTTC+GGG | - | chr8_3:4007547-4007566 | Msa1270670:intron | 25.0% |
| ! | TATCAGTCTCAAATACTTTA+AGG | + | chr8_3:4007730-4007749 | None:intergenic | 25.0% |
| ! | AGATTCTCACTTATATACAT+CGG | + | chr8_3:4007900-4007919 | None:intergenic | 25.0% |
| !! | TCCTATGAGTCTATATTTTT+CGG | - | chr8_3:4008016-4008035 | Msa1270670:CDS | 25.0% |
| ! | TGACCCTTACTTTAATTATT+TGG | - | chr8_3:4008122-4008141 | Msa1270670:intron | 25.0% |
| ! | GACCCTTACTTTAATTATTT+GGG | - | chr8_3:4008123-4008142 | Msa1270670:intron | 25.0% |
| ! | GAACCCAAATAATTAAAGTA+AGG | + | chr8_3:4008129-4008148 | None:intergenic | 25.0% |
| !! | TACTTTAATTATTTGGGTTC+AGG | - | chr8_3:4008129-4008148 | Msa1270670:intron | 25.0% |
| !! | TATTTTATGCAGACATACAT+TGG | - | chr8_3:4008390-4008409 | Msa1270670:CDS | 25.0% |
| !! | TTCTAATTTTCTCTTGCTTT+AGG | - | chr8_3:4008499-4008518 | Msa1270670:CDS | 25.0% |
| !! | TCTAATTTTCTCTTGCTTTA+GGG | - | chr8_3:4008500-4008519 | Msa1270670:CDS | 25.0% |
| ! | TTCTGTTACTACAAATTCAA+GGG | + | chr8_3:4008530-4008549 | None:intergenic | 25.0% |
| ! | TTTCTGTTACTACAAATTCA+AGG | + | chr8_3:4008531-4008550 | None:intergenic | 25.0% |
| !!! | GTAACAGAAAACATTTTTTC+AGG | - | chr8_3:4008541-4008560 | Msa1270670:CDS | 25.0% |
| !!! | GAAAACATTTTTTCAGGTTT+TGG | - | chr8_3:4008547-4008566 | Msa1270670:CDS | 25.0% |
| ! | GAACAAATGGAATATTTGTA+TGG | - | chr8_3:4008901-4008920 | Msa1270670:intron | 25.0% |
| !!! | TATCTTTCCTTGCTTATTTT+TGG | - | chr8_3:4009140-4009159 | Msa1270670:CDS | 25.0% |
| !!! | ATTTCAGGTATTTATTTTGC+AGG | - | chr8_3:4009579-4009598 | Msa1270670:intron | 25.0% |
| !!! | GGTTTTGTCGATTATTATTT+TGG | - | chr8_3:4009611-4009630 | Msa1270670:intron | 25.0% |
| !! | AGGTTGAATTGTGAAAATTT+TGG | + | chr8_3:4009711-4009730 | None:intergenic | 25.0% |
| ! | ATAAACATAACCGGAATTTA+TGG | + | chr8_3:4009806-4009825 | None:intergenic | 25.0% |
| ! | TCATAGAAATAAGCTGAAAA+CGG | - | chr8_3:4009951-4009970 | Msa1270670:intron | 25.0% |
| ! | TTATCAGTGTTGTCAAATAT+CGG | - | chr8_3:4010038-4010057 | Msa1270670:five_prime_UTR | 25.0% |
| ! | TTGTACTTATGCAATAGATA+AGG | - | chr8_3:4010193-4010212 | Msa1270670:intron | 25.0% |
| ! | TGTACTTATGCAATAGATAA+GGG | - | chr8_3:4010194-4010213 | Msa1270670:intron | 25.0% |
| !!! | TTTACTTTTAATTGGTGAAG+CGG | - | chr8_3:4010261-4010280 | Msa1270670:intron | 25.0% |
| ! | GATATATATAATTCACAGTC+AGG | + | chr8_3:4010387-4010406 | None:intergenic | 25.0% |
| !!! | ATATATATCTCACTGATTTG+AGG | - | chr8_3:4010398-4010417 | Msa1270670:intron | 25.0% |
| !!! | ATCCTTTTGTTGATTAAGTT+CGG | - | chr8_3:4010554-4010573 | Msa1270670:intron | 25.0% |
| !!! | TTAAAACCCATATTTTAACC+AGG | - | chr8_3:4010758-4010777 | Msa1270670:intron | 25.0% |
| ! | TTAATATACATTTAAGCCGT+AGG | + | chr8_3:4011089-4011108 | None:intergenic | 25.0% |
| ! | TTCAAAATGTCAATGAAACA+AGG | - | chr8_3:4011159-4011178 | Msa1270670:five_prime_UTR | 25.0% |
| AGGCACAAAAACTAAAAACA+TGG | + | chr8_3:4005042-4005061 | None:intergenic | 30.0% | |
| GAGGATAATTTCAAAGAAAG+TGG | + | chr8_3:4005118-4005137 | None:intergenic | 30.0% | |
| TAACGAGTCAAATGAAAATG+AGG | + | chr8_3:4005137-4005156 | None:intergenic | 30.0% | |
| !!! | ATGGAGAATTTTTTCAGAGA+GGG | + | chr8_3:4005190-4005209 | None:intergenic | 30.0% |
| !!! | AATGGAGAATTTTTTCAGAG+AGG | + | chr8_3:4005191-4005210 | None:intergenic | 30.0% |
| CTCTTCTTTAACAACAAAAC+AGG | + | chr8_3:4005274-4005293 | None:intergenic | 30.0% | |
| !!! | GAAGAAGCTGTTTTTGAAAT+TGG | - | chr8_3:4005326-4005345 | Msa1270670:CDS | 30.0% |
| !!! | AGAAGCTGTTTTTGAAATTG+GGG | - | chr8_3:4005328-4005347 | Msa1270670:CDS | 30.0% |
| TTGTGCTTATGTTCTTATTG+AGG | - | chr8_3:4005397-4005416 | Msa1270670:intron | 30.0% | |
| ATTGAGGAATTTAAGAAGGT+TGG | - | chr8_3:4005413-4005432 | Msa1270670:intron | 30.0% | |
| TTGAGGAATTTAAGAAGGTT+GGG | - | chr8_3:4005414-4005433 | Msa1270670:intron | 30.0% | |
| AATTCTTGTTACCCTTCTAT+TGG | + | chr8_3:4005682-4005701 | None:intergenic | 30.0% | |
| ACAATCATATAGAAACACCA+TGG | + | chr8_3:4006112-4006131 | None:intergenic | 30.0% | |
| ! | TTTTTGTGGAGTAGCTAAAT+TGG | - | chr8_3:4006161-4006180 | Msa1270670:intron | 30.0% |
| ! | TTTTGTGGAGTAGCTAAATT+GGG | - | chr8_3:4006162-4006181 | Msa1270670:intron | 30.0% |
| ! | ATAAAGAAACGGACTCATAT+AGG | - | chr8_3:4006248-4006267 | Msa1270670:intron | 30.0% |
| TCAAATTGTAAATCCATACC+TGG | + | chr8_3:4006405-4006424 | None:intergenic | 30.0% | |
| AGGTATGGATTTACAATTTG+AGG | - | chr8_3:4006404-4006423 | Msa1270670:intron | 30.0% | |
| TATGGATTTACAATTTGAGG+TGG | - | chr8_3:4006407-4006426 | Msa1270670:intron | 30.0% | |
| ! | TGCTACTGTCATTTGATATA+TGG | - | chr8_3:4006495-4006514 | Msa1270670:intron | 30.0% |
| GTGCTTATACTATAGCTTAT+AGG | + | chr8_3:4006537-4006556 | None:intergenic | 30.0% | |
| CTTATTTCAATAAGATCTCC+AGG | + | chr8_3:4006644-4006663 | None:intergenic | 30.0% | |
| GTGATAACCCTTAAATTTGA+TGG | - | chr8_3:4006842-4006861 | Msa1270670:intron | 30.0% | |
| TTGATGGAAAAGAAATCCAT+TGG | - | chr8_3:4006858-4006877 | Msa1270670:intron | 30.0% | |
| TGATGGAAAAGAAATCCATT+GGG | - | chr8_3:4006859-4006878 | Msa1270670:intron | 30.0% | |
| TATGAATAAATCTCGTCGAT+TGG | + | chr8_3:4007109-4007128 | None:intergenic | 30.0% | |
| TTATTCATATTATGGGGCAA+AGG | - | chr8_3:4007120-4007139 | Msa1270670:intron | 30.0% | |
| !! | GCAGTATATTTTGCTTTTCT+TGG | - | chr8_3:4007239-4007258 | Msa1270670:intron | 30.0% |
| TTGCAAAAATAAAGAAGCTG+TGG | + | chr8_3:4007367-4007386 | None:intergenic | 30.0% | |
| ! | ACATTTCAGGTCAATGAAAT+TGG | - | chr8_3:4007413-4007432 | Msa1270670:CDS | 30.0% |
| ! | CTGTAATGTTTTGTCAATTC+TGG | - | chr8_3:4007475-4007494 | Msa1270670:CDS | 30.0% |
| !! | TCAATGCATTCACTTTTCTT+AGG | - | chr8_3:4007570-4007589 | Msa1270670:intron | 30.0% |
| ! | AATACTTTAAGGAGTTCCAT+TGG | + | chr8_3:4007719-4007738 | None:intergenic | 30.0% |
| AAGTATTTCAGAGATATGAG+TGG | - | chr8_3:4007765-4007784 | Msa1270670:intron | 30.0% | |
| GCACATCTTTATGAAGTTAT+TGG | - | chr8_3:4007872-4007891 | Msa1270670:intron | 30.0% | |
| AAAGTAGAATCACAACAAGA+AGG | + | chr8_3:4007931-4007950 | None:intergenic | 30.0% | |
| ACCGAAAAATATAGACTCAT+AGG | + | chr8_3:4008020-4008039 | None:intergenic | 30.0% | |
| ! | TAATTATTTGGGTTCAGGTT+TGG | - | chr8_3:4008134-4008153 | Msa1270670:intron | 30.0% |
| ! | AATTATTTGGGTTCAGGTTT+GGG | - | chr8_3:4008135-4008154 | Msa1270670:intron | 30.0% |
| CAGTATATTACTAAGATTGG+AGG | - | chr8_3:4008185-4008204 | Msa1270670:intron | 30.0% | |
| ACAACGAAAACACTGAAAAA+CGG | - | chr8_3:4008240-4008259 | Msa1270670:intron | 30.0% | |
| !!! | TTTTCAGGTTTTGGAAAACT+TGG | - | chr8_3:4008556-4008575 | Msa1270670:CDS | 30.0% |
| TTATAGCTGTACTTGAGATA+AGG | + | chr8_3:4008596-4008615 | None:intergenic | 30.0% | |
| AAAAGAATACCTAGCTTAGT+GGG | + | chr8_3:4008651-4008670 | None:intergenic | 30.0% | |
| AAAAAGAATACCTAGCTTAG+TGG | + | chr8_3:4008652-4008671 | None:intergenic | 30.0% | |
| ATTACTTAATGGTTGCAATG+CGG | + | chr8_3:4008678-4008697 | None:intergenic | 30.0% | |
| CTGACTGAAAAATTCTAATC+TGG | - | chr8_3:4009015-4009034 | Msa1270670:intron | 30.0% | |
| !!! | TTATTTTTGGAGGCTGTTTT+AGG | - | chr8_3:4009153-4009172 | Msa1270670:CDS | 30.0% |
| !!! | TATTTTTGGAGGCTGTTTTA+GGG | - | chr8_3:4009154-4009173 | Msa1270670:CDS | 30.0% |
| !!! | TTGTTTTCAAGTTCTCATGA+AGG | - | chr8_3:4009250-4009269 | Msa1270670:intron | 30.0% |
| !! | GCATAAGCTATTTCTACAAT+CGG | + | chr8_3:4009319-4009338 | None:intergenic | 30.0% |
| ! | TTAAGCGTTATTATTGGTTG+TGG | + | chr8_3:4009346-4009365 | None:intergenic | 30.0% |
| AACGACATAAACTTTCACAA+AGG | + | chr8_3:4009433-4009452 | None:intergenic | 30.0% | |
| ! | TATGTTGTTCTGAACAGAAA+GGG | + | chr8_3:4009467-4009486 | None:intergenic | 30.0% |
| ! | TTATGTTGTTCTGAACAGAA+AGG | + | chr8_3:4009468-4009487 | None:intergenic | 30.0% |
| TTCTGTTCAGAACAACATAA+TGG | - | chr8_3:4009468-4009487 | Msa1270670:intron | 30.0% | |
| ! | AGAACAACATAATGGAAATC+AGG | - | chr8_3:4009476-4009495 | Msa1270670:intron | 30.0% |
| CAAAATTACTAGCAGCTTTA+GGG | + | chr8_3:4009509-4009528 | None:intergenic | 30.0% | |
| TCAAAATTACTAGCAGCTTT+AGG | + | chr8_3:4009510-4009529 | None:intergenic | 30.0% | |
| !!! | GTATTTATTTTGCAGGACTT+TGG | - | chr8_3:4009586-4009605 | Msa1270670:intron | 30.0% |
| TACGTTGACATAAACATAAC+CGG | + | chr8_3:4009815-4009834 | None:intergenic | 30.0% | |
| ! | AACCGTTTTCACATAAGTTA+TGG | - | chr8_3:4009901-4009920 | Msa1270670:intron | 30.0% |
| TGCCATAACTTATGTGAAAA+CGG | + | chr8_3:4009906-4009925 | None:intergenic | 30.0% | |
| TTGTAAATCTGTAAGCTGTT+TGG | + | chr8_3:4010014-4010033 | None:intergenic | 30.0% | |
| ATTTAGACTTATGGTTCGTT+TGG | + | chr8_3:4010233-4010252 | None:intergenic | 30.0% | |
| !! | TTTAGCTTGGTTATATGATG+AGG | - | chr8_3:4010478-4010497 | Msa1270670:intron | 30.0% |
| AACCGAACTTAATCAACAAA+AGG | + | chr8_3:4010559-4010578 | None:intergenic | 30.0% | |
| AACATCTCTACTTTCTATCA+TGG | + | chr8_3:4010649-4010668 | None:intergenic | 30.0% | |
| !!! | TTTAACCAGGTTTTTTAGCT+TGG | - | chr8_3:4010771-4010790 | Msa1270670:intron | 30.0% |
| !!! | AAGGTACTGTTTTCTTTTGT+AGG | - | chr8_3:4010846-4010865 | Msa1270670:five_prime_UTR | 30.0% |
| !!! | TGTGTTCTAAGAAGCTTTTA+AGG | - | chr8_3:4010923-4010942 | Msa1270670:five_prime_UTR | 30.0% |
| AATGGAGAAAACAAAAATCC+AGG | + | chr8_3:4011065-4011084 | None:intergenic | 30.0% | |
| !! | TTTGTTTTCTCCATTTCCTA+CGG | - | chr8_3:4011070-4011089 | Msa1270670:five_prime_UTR | 30.0% |
| ! | ATCTAAGTTCGAGGATTTTG+AGG | + | chr8_3:4005004-4005023 | None:intergenic | 35.0% |
| AAACATGGAAATATACGACG+AGG | + | chr8_3:4005027-4005046 | None:intergenic | 35.0% | |
| TTTCAGAGAGGGATTGAATT+GGG | + | chr8_3:4005179-4005198 | None:intergenic | 35.0% | |
| ! | TTTTCAGAGAGGGATTGAAT+TGG | + | chr8_3:4005180-4005199 | None:intergenic | 35.0% |
| TAACAACAAAACAGGCCAAA+TGG | + | chr8_3:4005266-4005285 | None:intergenic | 35.0% | |
| CATTGCTGATGAGTTCATTA+AGG | - | chr8_3:4005460-4005479 | Msa1270670:intron | 35.0% | |
| TATGAAGTACAAACACTCCT+CGG | - | chr8_3:4005765-4005784 | Msa1270670:CDS | 35.0% | |
| TGATAAGAGTCTATGAAGCA+CGG | + | chr8_3:4005914-4005933 | None:intergenic | 35.0% | |
| ! | TTTACAATTTGAGGTGGAAG+AGG | - | chr8_3:4006413-4006432 | Msa1270670:intron | 35.0% |
| CAACTGAAAATAGAACCATC+AGG | + | chr8_3:4006459-4006478 | None:intergenic | 35.0% | |
| !! | CTGATGGTTCTATTTTCAGT+TGG | - | chr8_3:4006457-4006476 | Msa1270670:intron | 35.0% |
| AAAGAAATCCATTGGGAAAC+CGG | - | chr8_3:4006866-4006885 | Msa1270670:intron | 35.0% | |
| GGAGAATCTGATTCAGAAAT+TGG | - | chr8_3:4006889-4006908 | Msa1270670:intron | 35.0% | |
| AAGCAAGTGTTTCCTTTACA+TGG | - | chr8_3:4006929-4006948 | Msa1270670:intron | 35.0% | |
| AGACTAGAAAGAAACTTCTC+AGG | - | chr8_3:4007047-4007066 | Msa1270670:intron | 35.0% | |
| AAAGAAACTTCTCAGGACTT+GGG | - | chr8_3:4007054-4007073 | Msa1270670:intron | 35.0% | |
| TATCCATTCTCCTTATCCTA+CGG | - | chr8_3:4007188-4007207 | Msa1270670:CDS | 35.0% | |
| CAAAAATAAAGAAGCTGTGG+TGG | + | chr8_3:4007364-4007383 | None:intergenic | 35.0% | |
| ATCACCACTACAAAGAAAAC+AGG | + | chr8_3:4007447-4007466 | None:intergenic | 35.0% | |
| TCTTTGTAGTGGTGATACTT+TGG | - | chr8_3:4007451-4007470 | Msa1270670:CDS | 35.0% | |
| CTTTGTAGTGGTGATACTTT+GGG | - | chr8_3:4007452-4007471 | Msa1270670:CDS | 35.0% | |
| CATTACTCATTACTAGTACC+TGG | + | chr8_3:4007526-4007545 | None:intergenic | 35.0% | |
| GAGGAAAAACATCTCAGAAA+GGG | + | chr8_3:4007604-4007623 | None:intergenic | 35.0% | |
| AGAGGAAAAACATCTCAGAA+AGG | + | chr8_3:4007605-4007624 | None:intergenic | 35.0% | |
| ! | TTTGAGACTGATAGAGCAAA+AGG | - | chr8_3:4007737-4007756 | Msa1270670:intron | 35.0% |
| TTGAGACTGATAGAGCAAAA+GGG | - | chr8_3:4007738-4007757 | Msa1270670:intron | 35.0% | |
| TTTCAGAGATATGAGTGGTT+AGG | - | chr8_3:4007770-4007789 | Msa1270670:intron | 35.0% | |
| TTCAGAGATATGAGTGGTTA+GGG | - | chr8_3:4007771-4007790 | Msa1270670:intron | 35.0% | |
| TATTACTAAGATTGGAGGTC+AGG | - | chr8_3:4008190-4008209 | Msa1270670:intron | 35.0% | |
| TTGGTCTACAAGGTGATAAT+GGG | - | chr8_3:4008272-4008291 | Msa1270670:intron | 35.0% | |
| TGAAAAGTTACGATGCAACA+AGG | + | chr8_3:4008430-4008449 | None:intergenic | 35.0% | |
| !!! | TTCGCAAAGTTTTGATTCAG+CGG | - | chr8_3:4008454-4008473 | Msa1270670:CDS | 35.0% |
| ! | GCTATAAAAAGTACAGCGTT+CGG | - | chr8_3:4008609-4008628 | Msa1270670:intron | 35.0% |
| AAAGAATACCTAGCTTAGTG+GGG | + | chr8_3:4008650-4008669 | None:intergenic | 35.0% | |
| ACACAAGAAGAAGAGAGAAA+AGG | - | chr8_3:4008720-4008739 | Msa1270670:intron | 35.0% | |
| CACAAGAAGAAGAGAGAAAA+GGG | - | chr8_3:4008721-4008740 | Msa1270670:intron | 35.0% | |
| !! | CTTGAAGATGGGTTATTTGA+TGG | - | chr8_3:4008829-4008848 | Msa1270670:intron | 35.0% |
| ! | AATCGAGAGTACAACAGATT+TGG | + | chr8_3:4008860-4008879 | None:intergenic | 35.0% |
| TTCAGTAAGCATTACAAGAC+TGG | - | chr8_3:4008977-4008996 | Msa1270670:CDS | 35.0% | |
| !!! | CTTTCCTTGCTTATTTTTGG+AGG | - | chr8_3:4009143-4009162 | Msa1270670:CDS | 35.0% |
| GAGAACTTGAAAACAACTTG+AGG | + | chr8_3:4009246-4009265 | None:intergenic | 35.0% | |
| !! | AGCTGCTAGTAATTTTGAGA+CGG | - | chr8_3:4009512-4009531 | Msa1270670:intron | 35.0% |
| TACCTGAAATATGTTAAGCC+AGG | + | chr8_3:4009569-4009588 | None:intergenic | 35.0% | |
| !! | TTATTTTGCAGGACTTTGGA+AGG | - | chr8_3:4009590-4009609 | Msa1270670:intron | 35.0% |
| ATTCATGTAGGCATGATTGA+TGG | + | chr8_3:4009774-4009793 | None:intergenic | 35.0% | |
| TCGATTGATGCCATAAATTC+CGG | - | chr8_3:4009793-4009812 | Msa1270670:intron | 35.0% | |
| ATAAGCTGAAAACGGCTTAT+AGG | - | chr8_3:4009959-4009978 | Msa1270670:intron | 35.0% | |
| CATATCCACCAAAAAAGACA+TGG | + | chr8_3:4010141-4010160 | None:intergenic | 35.0% | |
| !!! | CATGTCTTTTTTGGTGGATA+TGG | - | chr8_3:4010139-4010158 | Msa1270670:intron | 35.0% |
| ! | GAAGTGCTTCATCATTTAGA+TGG | - | chr8_3:4010349-4010368 | Msa1270670:intron | 35.0% |
| GTGAGAAACTGCAAAAATCA+AGG | + | chr8_3:4010428-4010447 | None:intergenic | 35.0% | |
| CTTGGTTATATGATGAGGAA+GGG | - | chr8_3:4010483-4010502 | Msa1270670:intron | 35.0% | |
| TATATGATGAGGAAGGGAAA+TGG | - | chr8_3:4010489-4010508 | Msa1270670:intron | 35.0% | |
| !! | ACTTGCTGCAATTTTGATCA+TGG | - | chr8_3:4010526-4010545 | Msa1270670:intron | 35.0% |
| !! | AAGCTTTTAAGGACAATCTC+CGG | - | chr8_3:4010934-4010953 | Msa1270670:five_prime_UTR | 35.0% |
| TACATTTAAGCCGTAGGAAA+TGG | + | chr8_3:4011083-4011102 | None:intergenic | 35.0% | |
| !! | AACAAGGCTTGTTTCTTTTG+TGG | - | chr8_3:4011175-4011194 | Msa1270670:five_prime_UTR | 35.0% |
| GAGGACTGTGTTCAAAGAAA+CGG | + | chr8_3:4004985-4005004 | None:intergenic | 40.0% | |
| !! | TTTTTGAGCTGAAGGGGTTA+TGG | + | chr8_3:4005226-4005245 | None:intergenic | 40.0% |
| AACCCCTTCAGCTCAAAAAA+CGG | - | chr8_3:4005227-4005246 | Msa1270670:three_prime_UTR | 40.0% | |
| !!! | ATCCGTTTTTTGAGCTGAAG+GGG | + | chr8_3:4005232-4005251 | None:intergenic | 40.0% |
| !!! | GATCCGTTTTTTGAGCTGAA+GGG | + | chr8_3:4005233-4005252 | None:intergenic | 40.0% |
| !!! | AGATCCGTTTTTTGAGCTGA+AGG | + | chr8_3:4005234-4005253 | None:intergenic | 40.0% |
| GGATCTTTCTTCCATCCATT+TGG | - | chr8_3:4005248-4005267 | Msa1270670:exon | 40.0% | |
| AACAAAACAGGCCAAATGGA+TGG | + | chr8_3:4005262-4005281 | None:intergenic | 40.0% | |
| !!! | AGCTGTTTTTGAAATTGGGG+TGG | - | chr8_3:4005331-4005350 | Msa1270670:CDS | 40.0% |
| CAAACTATTAGTTGTGCCGA+TGG | - | chr8_3:4005869-4005888 | Msa1270670:intron | 40.0% | |
| ! | GAACATGACAAGGGTATGTT+TGG | + | chr8_3:4006090-4006109 | None:intergenic | 40.0% |
| AACACCATGGAACATGACAA+GGG | + | chr8_3:4006099-4006118 | None:intergenic | 40.0% | |
| AAACACCATGGAACATGACA+AGG | + | chr8_3:4006100-4006119 | None:intergenic | 40.0% | |
| !! | TGGGCTGTGATTTGTTTAGT+TGG | - | chr8_3:4006181-4006200 | Msa1270670:intron | 40.0% |
| ! | AGAAACGGACTCATATAGGT+AGG | - | chr8_3:4006252-4006271 | Msa1270670:intron | 40.0% |
| GGTATATGCAAATCCCCAAA+AGG | - | chr8_3:4006273-4006292 | Msa1270670:intron | 40.0% | |
| !! | GTTGTTTTCACAAGTGATCC+TGG | - | chr8_3:4006623-4006642 | Msa1270670:intron | 40.0% |
| GACTATTATGAAACGGAAGC+TGG | - | chr8_3:4006749-4006768 | Msa1270670:CDS | 40.0% | |
| AAGAAATCCATTGGGAAACC+GGG | - | chr8_3:4006867-4006886 | Msa1270670:intron | 40.0% | |
| TTTCTGAATCAGATTCTCCC+CGG | + | chr8_3:4006888-4006907 | None:intergenic | 40.0% | |
| GAAAGAAACTTCTCAGGACT+TGG | - | chr8_3:4007053-4007072 | Msa1270670:intron | 40.0% | |
| ATTCATTCATTCGTAGCCGT+AGG | + | chr8_3:4007207-4007226 | None:intergenic | 40.0% | |
| TTCTTGGAATGTACACACGA+TGG | - | chr8_3:4007255-4007274 | Msa1270670:intron | 40.0% | |
| !! | TGATTTTAGGTGAGCCAATC+TGG | - | chr8_3:4007319-4007338 | Msa1270670:intron | 40.0% |
| ACATACACTACTAGCCAGAT+TGG | + | chr8_3:4007336-4007355 | None:intergenic | 40.0% | |
| ! | GCTTCCTGTTTTCTTTGTAG+TGG | - | chr8_3:4007440-4007459 | Msa1270670:CDS | 40.0% |
| AAAATTCAGCACTTCTAGCC+AGG | - | chr8_3:4007505-4007524 | Msa1270670:CDS | 40.0% | |
| ATCCAGGATACAAGATTCCA+GGG | - | chr8_3:4007669-4007688 | Msa1270670:CDS | 40.0% | |
| ! | ACTTTAAGGAGTTCCATTGG+TGG | + | chr8_3:4007716-4007735 | None:intergenic | 40.0% |
| CTTGGTCTACAAGGTGATAA+TGG | - | chr8_3:4008271-4008290 | Msa1270670:intron | 40.0% | |
| ! | TGGTCTACAAGGTGATAATG+GGG | - | chr8_3:4008273-4008292 | Msa1270670:intron | 40.0% |
| !! | GGTGATAATGGGGAATTAGT+AGG | - | chr8_3:4008283-4008302 | Msa1270670:intron | 40.0% |
| !!! | TCAGGTTTTGGAAAACTTGG+TGG | - | chr8_3:4008559-4008578 | Msa1270670:CDS | 40.0% |
| AGCTTAGTGGGGGATAAATA+AGG | + | chr8_3:4008639-4008658 | None:intergenic | 40.0% | |
| TATTTATCCCCCACTAAGCT+AGG | - | chr8_3:4008639-4008658 | Msa1270670:intron | 40.0% | |
| AAGAATACCTAGCTTAGTGG+GGG | + | chr8_3:4008649-4008668 | None:intergenic | 40.0% | |
| GGTTGCAGATTTCTTAGAGT+TGG | - | chr8_3:4009036-4009055 | Msa1270670:intron | 40.0% | |
| ACAGCCTCCAAAAATAAGCA+AGG | + | chr8_3:4009150-4009169 | None:intergenic | 40.0% | |
| !! | AGCTATTTCTACAATCGGAG+AGG | + | chr8_3:4009314-4009333 | None:intergenic | 40.0% |
| AGCCTGGCTTAACATATTTC+AGG | - | chr8_3:4009564-4009583 | Msa1270670:intron | 40.0% | |
| ! | TGGCATCAATCGATTCATGT+AGG | + | chr8_3:4009786-4009805 | None:intergenic | 40.0% |
| !! | CTTATTTCTATGAGCTCTCG+AGG | + | chr8_3:4009944-4009963 | None:intergenic | 40.0% |
| TCTACTACTGCAATCCACAT+AGG | + | chr8_3:4010075-4010094 | None:intergenic | 40.0% | |
| !!! | TGGCTACACCATGTCTTTTT+TGG | - | chr8_3:4010130-4010149 | Msa1270670:intron | 40.0% |
| !!! | CTACACCATGTCTTTTTTGG+TGG | - | chr8_3:4010133-4010152 | Msa1270670:intron | 40.0% |
| !!! | GTCTTTTTTGGTGGATATGG+CGG | - | chr8_3:4010142-4010161 | Msa1270670:intron | 40.0% |
| GCTTGGTTATATGATGAGGA+AGG | - | chr8_3:4010482-4010501 | Msa1270670:intron | 40.0% | |
| ATCAAAATTGCAGCAAGTCC+AGG | + | chr8_3:4010524-4010543 | None:intergenic | 40.0% | |
| AGAGAAGAAACAATCACCTC+AGG | + | chr8_3:4010596-4010615 | None:intergenic | 40.0% | |
| ACAGGTAAAGCCAGGAAAAT+GGG | - | chr8_3:4010687-4010706 | Msa1270670:intron | 40.0% | |
| ! | TTCTTTTGTAGGAACCTGCT+TGG | - | chr8_3:4010857-4010876 | Msa1270670:five_prime_UTR | 40.0% |
| ! | TCTTTTGTAGGAACCTGCTT+GGG | - | chr8_3:4010858-4010877 | Msa1270670:five_prime_UTR | 40.0% |
| ! | TCCAAAGTTCCTTTTTCCTC+CGG | + | chr8_3:4010956-4010975 | None:intergenic | 40.0% |
| GAAACGGCAACATGTGTCTT+TGG | + | chr8_3:4004969-4004988 | None:intergenic | 45.0% | |
| AAATTGGGGTGGTGATTCCA+AGG | - | chr8_3:4005342-4005361 | Msa1270670:CDS | 45.0% | |
| GTACAAACACTCCTCGGATT+AGG | - | chr8_3:4005771-4005790 | Msa1270670:CDS | 45.0% | |
| GAGTCTATGAAGCACGGATA+CGG | + | chr8_3:4005908-4005927 | None:intergenic | 45.0% | |
| CATACCCTTGTCATGTTCCA+TGG | - | chr8_3:4006092-4006111 | Msa1270670:intron | 45.0% | |
| TGTTTAGTTGGCTGCACCTT+TGG | - | chr8_3:4006193-4006212 | Msa1270670:intron | 45.0% | |
| GCTCTTCCTAATGTCTCCAA+AGG | + | chr8_3:4006212-4006231 | None:intergenic | 45.0% | |
| ! | AGAACACACACGCTCCTTTT+GGG | + | chr8_3:4006290-4006309 | None:intergenic | 45.0% |
| ! | TAGAACACACACGCTCCTTT+TGG | + | chr8_3:4006291-4006310 | None:intergenic | 45.0% |
| CTAGCAAGCATGTGATGTGA+TGG | - | chr8_3:4006353-4006372 | Msa1270670:intron | 45.0% | |
| GCATGTGATGTGATGGTTTG+TGG | - | chr8_3:4006360-4006379 | Msa1270670:intron | 45.0% | |
| ! | TCTGTGTTTTGTGCTATGCC+AGG | - | chr8_3:4006384-4006403 | Msa1270670:intron | 45.0% |
| ! | GTTTTGTGCTATGCCAGGTA+TGG | - | chr8_3:4006389-4006408 | Msa1270670:intron | 45.0% |
| GCTTTCGTGAAACAACCTGA+TGG | - | chr8_3:4006441-4006460 | Msa1270670:intron | 45.0% | |
| AGACTGTCTTGGAGAGCTTA+TGG | + | chr8_3:4006702-4006721 | None:intergenic | 45.0% | |
| AGAAATCCATTGGGAAACCG+GGG | - | chr8_3:4006868-4006887 | Msa1270670:intron | 45.0% | |
| TAGCCGTAGGATAAGGAGAA+TGG | + | chr8_3:4007194-4007213 | None:intergenic | 45.0% | |
| TCATTCGTAGCCGTAGGATA+AGG | + | chr8_3:4007201-4007220 | None:intergenic | 45.0% | |
| ATGTAAGTCCAAATGCAGCG+AGG | + | chr8_3:4007289-4007308 | None:intergenic | 45.0% | |
| CATCTGCAAGAGAACATGAG+AGG | + | chr8_3:4007623-4007642 | None:intergenic | 45.0% | |
| CTCTCATGTTCTCTTGCAGA+TGG | - | chr8_3:4007621-4007640 | Msa1270670:intron | 45.0% | |
| ACTGTAACTGCAGAGCTAAG+AGG | + | chr8_3:4007647-4007666 | None:intergenic | 45.0% | |
| TCTGCAGTTACAGTTGATCC+AGG | - | chr8_3:4007653-4007672 | Msa1270670:CDS | 45.0% | |
| GATCCAGGATACAAGATTCC+AGG | - | chr8_3:4007668-4007687 | Msa1270670:CDS | 45.0% | |
| ATACAAGATTCCAGGGAGGA+AGG | - | chr8_3:4007676-4007695 | Msa1270670:CDS | 45.0% | |
| TACAAGATTCCAGGGAGGAA+GGG | - | chr8_3:4007677-4007696 | Msa1270670:CDS | 45.0% | |
| GACTGATAGAGCAAAAGGGA+AGG | - | chr8_3:4007742-4007761 | Msa1270670:intron | 45.0% | |
| ! | TCTCCAGTTACCTTTCGAGT+TGG | - | chr8_3:4007844-4007863 | Msa1270670:CDS | 45.0% |
| ATGCCAACTCGAAAGGTAAC+TGG | + | chr8_3:4007850-4007869 | None:intergenic | 45.0% | |
| TGGGGAATTAGTAGGTCCTA+TGG | - | chr8_3:4008291-4008310 | Msa1270670:intron | 45.0% | |
| GACTTTCTTCTGCAGGTGTT+TGG | - | chr8_3:4008363-4008382 | Msa1270670:CDS | 45.0% | |
| TGGCAGAGTAAGAAGGCTTT+AGG | + | chr8_3:4008795-4008814 | None:intergenic | 45.0% | |
| TTAGAGTTGGCGTTGCAGTT+TGG | - | chr8_3:4009049-4009068 | Msa1270670:intron | 45.0% | |
| CAGCAAAAGCAAATGCAGGT+GGG | + | chr8_3:4009102-4009121 | None:intergenic | 45.0% | |
| ACAGCAGCAAAAGCAAATGC+AGG | + | chr8_3:4009106-4009125 | None:intergenic | 45.0% | |
| !! | TGCATTTGCTTTTGCTGCTG+TGG | - | chr8_3:4009105-4009124 | Msa1270670:intron | 45.0% |
| CCAACGTTAAGCAAAGCAAG+GGG | + | chr8_3:4009382-4009401 | None:intergenic | 45.0% | |
| GCCAACGTTAAGCAAAGCAA+GGG | + | chr8_3:4009383-4009402 | None:intergenic | 45.0% | |
| AGCCAACGTTAAGCAAAGCA+AGG | + | chr8_3:4009384-4009403 | None:intergenic | 45.0% | |
| TATGTTAAGCCAGGCTCCTA+CGG | + | chr8_3:4009560-4009579 | None:intergenic | 45.0% | |
| GTGTTGTCAAATATCGGCCA+TGG | - | chr8_3:4010044-4010063 | Msa1270670:five_prime_UTR | 45.0% | |
| ATGCCATGACCAGTTTCTGA+AGG | - | chr8_3:4010106-4010125 | Msa1270670:intron | 45.0% | |
| CATCCTTCAGAAACTGGTCA+TGG | + | chr8_3:4010112-4010131 | None:intergenic | 45.0% | |
| ! | CATGACCAGTTTCTGAAGGA+TGG | - | chr8_3:4010110-4010129 | Msa1270670:intron | 45.0% |
| TGTAGCCATCCTTCAGAAAC+TGG | + | chr8_3:4010118-4010137 | None:intergenic | 45.0% | |
| !!! | TGGTGGATATGGCGGATTTT+TGG | - | chr8_3:4010150-4010169 | Msa1270670:intron | 45.0% |
| ! | CCAAGCTAAAAGAGCACAGT+TGG | + | chr8_3:4010468-4010487 | None:intergenic | 45.0% |
| !! | CCAACTGTGCTCTTTTAGCT+TGG | - | chr8_3:4010465-4010484 | Msa1270670:intron | 45.0% |
| GGGAAATGGAAAGTAGAACC+TGG | - | chr8_3:4010503-4010522 | Msa1270670:intron | 45.0% | |
| TTGTGAGAGATGACACTGAC+AGG | - | chr8_3:4010669-4010688 | Msa1270670:intron | 45.0% | |
| GACAGGTAAAGCCAGGAAAA+TGG | - | chr8_3:4010686-4010705 | Msa1270670:intron | 45.0% | |
| CCAAGCCAAGCTAAAAAACC+TGG | + | chr8_3:4010779-4010798 | None:intergenic | 45.0% | |
| !!! | CCAGGTTTTTTAGCTTGGCT+TGG | - | chr8_3:4010776-4010795 | Msa1270670:intron | 45.0% |
| AACTGGCAAAACAAGCTACC+TGG | + | chr8_3:4010813-4010832 | None:intergenic | 45.0% | |
| !! | CCTTAGCTTGTCAGAAGAAC+TGG | + | chr8_3:4010830-4010849 | None:intergenic | 45.0% |
| CCAGTTCTTCTGACAAGCTA+AGG | - | chr8_3:4010827-4010846 | Msa1270670:five_prime_UTR | 45.0% | |
| !! | CTTTTAAGGACAATCTCCGG+AGG | - | chr8_3:4010937-4010956 | Msa1270670:five_prime_UTR | 45.0% |
| TCCGGAGGAAAAAGGAACTT+TGG | - | chr8_3:4010952-4010971 | Msa1270670:five_prime_UTR | 45.0% | |
| GAGCTTTCTTTCTCTCTTGC+TGG | + | chr8_3:4011040-4011059 | None:intergenic | 45.0% | |
| GAGAGAAAGAAAGCTCAACC+TGG | - | chr8_3:4011044-4011063 | Msa1270670:five_prime_UTR | 45.0% | |
| !!! | ATTTTATTATTTATTTTGAA+GGG | - | chr8_3:4011223-4011242 | Msa1270670:five_prime_UTR | 5.0% |
| ACGACGAGGATCTAAGTTCG+AGG | + | chr8_3:4005013-4005032 | None:intergenic | 50.0% | |
| ! | GCTGCACCTTTGGAGACATT+AGG | - | chr8_3:4006203-4006222 | Msa1270670:intron | 50.0% |
| ! | GAACACACACGCTCCTTTTG+GGG | + | chr8_3:4006289-4006308 | None:intergenic | 50.0% |
| GACACGAAGAGAGACTGTCT+TGG | + | chr8_3:4006713-4006732 | None:intergenic | 50.0% | |
| TCAGGACTTGGGCTCTTCAT+TGG | - | chr8_3:4007065-4007084 | Msa1270670:intron | 50.0% | |
| GACTTGGGCTCTTCATTGGT+GGG | - | chr8_3:4007069-4007088 | Msa1270670:intron | 50.0% | |
| CTGTTCTTCCTCGCTGCATT+TGG | - | chr8_3:4007278-4007297 | Msa1270670:intron | 50.0% | |
| CTCCCTGGAATCTTGTATCC+TGG | + | chr8_3:4007674-4007693 | None:intergenic | 50.0% | |
| CAGGATACAAGATTCCAGGG+AGG | - | chr8_3:4007672-4007691 | Msa1270670:CDS | 50.0% | |
| AAGTTCCCTACAGCCACCAA+TGG | - | chr8_3:4007700-4007719 | Msa1270670:intron | 50.0% | |
| ! | GAGTTCCATTGGTGGCTGTA+GGG | + | chr8_3:4007708-4007727 | None:intergenic | 50.0% |
| TGTGCGTATGCCAACTCGAA+AGG | + | chr8_3:4007857-4007876 | None:intergenic | 50.0% | |
| TGAAAAACGGTCCGACAGCT+TGG | - | chr8_3:4008253-4008272 | Msa1270670:intron | 50.0% | |
| CACCTTGTAGACCAAGCTGT+CGG | + | chr8_3:4008267-4008286 | None:intergenic | 50.0% | |
| AGACGACGACTTTCTTCTGC+AGG | - | chr8_3:4008356-4008375 | Msa1270670:CDS | 50.0% | |
| GAAAAGCAACCTCCGACAGA+AGG | + | chr8_3:4008482-4008501 | None:intergenic | 50.0% | |
| CCAATGCTGGCAGAGTAAGA+AGG | + | chr8_3:4008802-4008821 | None:intergenic | 50.0% | |
| CCTTCTTACTCTGCCAGCAT+TGG | - | chr8_3:4008799-4008818 | Msa1270670:CDS | 50.0% | |
| ATTGGCGAGGAGCTTGAAGA+TGG | - | chr8_3:4008817-4008836 | Msa1270670:CDS | 50.0% | |
| TTGGCGAGGAGCTTGAAGAT+GGG | - | chr8_3:4008818-4008837 | Msa1270670:CDS | 50.0% | |
| GCAGCAAAAGCAAATGCAGG+TGG | + | chr8_3:4009103-4009122 | None:intergenic | 50.0% | |
| CCCCTTGCTTTGCTTAACGT+TGG | - | chr8_3:4009379-4009398 | Msa1270670:CDS | 50.0% | |
| AATCCACATAGGCGTCACCA+TGG | + | chr8_3:4010064-4010083 | None:intergenic | 50.0% | |
| TAAGTTCGGTTTCGCTCGCT+TGG | - | chr8_3:4010568-4010587 | Msa1270670:intron | 50.0% | |
| TGACACTGACAGGTAAAGCC+AGG | - | chr8_3:4010679-4010698 | Msa1270670:intron | 50.0% | |
| ACAAGCTACCTGGTCTGCAT+CGG | + | chr8_3:4010803-4010822 | None:intergenic | 50.0% | |
| CCTGTGTAGTGTGTTTCGCA+CGG | + | chr8_3:4010894-4010913 | None:intergenic | 50.0% | |
| GAAACACACTACACAGGCAC+AGG | - | chr8_3:4010897-4010916 | Msa1270670:five_prime_UTR | 50.0% | |
| GGACAATCTCCGGAGGAAAA+AGG | - | chr8_3:4010944-4010963 | Msa1270670:five_prime_UTR | 50.0% | |
| CGGACACTGACACTGACCAT+CGG | + | chr8_3:4005888-4005907 | None:intergenic | 55.0% | |
| GATTCTCCCCGGTTTCCCAA+TGG | + | chr8_3:4006877-4006896 | None:intergenic | 55.0% | |
| GGACTTGGGCTCTTCATTGG+TGG | - | chr8_3:4007068-4007087 | Msa1270670:intron | 55.0% | |
| ! | GGAGTTCCATTGGTGGCTGT+AGG | + | chr8_3:4007709-4007728 | None:intergenic | 55.0% |
| GTCCGACAGCTTGGTCTACA+AGG | - | chr8_3:4008262-4008281 | Msa1270670:intron | 55.0% | |
| GATTCAGCGGCTCCTTCTGT+CGG | - | chr8_3:4008467-4008486 | Msa1270670:CDS | 55.0% | |
| !! | TTACTCTGCCAGCATTGGCG+AGG | - | chr8_3:4008804-4008823 | Msa1270670:CDS | 55.0% |
| TTCAAGCTCCTCGCCAATGC+TGG | + | chr8_3:4008815-4008834 | None:intergenic | 55.0% | |
| TTTCGCTCGCTTGGTTCCTG+AGG | - | chr8_3:4010577-4010596 | Msa1270670:intron | 55.0% | |
| AAGCCCAGCCCTACACTTAG+CGG | + | chr8_3:4010727-4010746 | None:intergenic | 55.0% | |
| CTAAGTGTAGGGCTGGGCTT+AGG | - | chr8_3:4010727-4010746 | Msa1270670:intron | 55.0% | |
| CAAGCTACCTGGTCTGCATC+GGG | + | chr8_3:4010802-4010821 | None:intergenic | 55.0% | |
| CCGTGCGAAACACACTACAC+AGG | - | chr8_3:4010891-4010910 | Msa1270670:five_prime_UTR | 55.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr8_3:4005781-4005800 | Msa1270670:CDS | 60.0% |
| GATTAGGCGTGTCCCGGTGT+CGG | - | chr8_3:4005787-4005806 | Msa1270670:CDS | 60.0% | |
| AGGGAACTTCCCTTCCTCCC+TGG | + | chr8_3:4007689-4007708 | None:intergenic | 60.0% | |
| !!! | GTCGGGCTAGCCCATTTTCC+TGG | + | chr8_3:4010700-4010719 | None:intergenic | 60.0% |
| !! | GGAAAATGGGCTAGCCCGAC+CGG | - | chr8_3:4010700-4010719 | Msa1270670:intron | 60.0% |
| AGCCCAGCCCTACACTTAGC+GGG | + | chr8_3:4010726-4010745 | None:intergenic | 60.0% | |
| CGGTTCGCTCTTACCCAAGC+AGG | + | chr8_3:4010874-4010893 | None:intergenic | 60.0% | |
| ACCGGGACACGCCTAATCCG+AGG | + | chr8_3:4005785-4005804 | None:intergenic | 65.0% | |
| ACGCGACACGTGTCCGACAC+CGG | + | chr8_3:4005803-4005822 | None:intergenic | 65.0% | |
| TCAGCGGCTCCTTCTGTCGG+AGG | - | chr8_3:4008470-4008489 | Msa1270670:CDS | 65.0% | |
| ! | CGGCCATGGTGACGCCTATG+TGG | - | chr8_3:4010058-4010077 | Msa1270670:intron | 65.0% |
| ! | CTACACTTAGCGGGCCGGTC+GGG | + | chr8_3:4010717-4010736 | None:intergenic | 65.0% |
| ! | CCTACACTTAGCGGGCCGGT+CGG | + | chr8_3:4010718-4010737 | None:intergenic | 65.0% |
| CGACCGGCCCGCTAAGTGTA+GGG | - | chr8_3:4010716-4010735 | Msa1270670:intron | 65.0% | |
| ! | CAGCCCTACACTTAGCGGGC+CGG | + | chr8_3:4010722-4010741 | None:intergenic | 65.0% |
| GGCCCGCTAAGTGTAGGGCT+GGG | - | chr8_3:4010721-4010740 | Msa1270670:intron | 65.0% | |
| CGCGACACGTGTCCGACACC+GGG | + | chr8_3:4005802-4005821 | None:intergenic | 70.0% | |
| GTCGGACACGTGTCGCGTCG+TGG | - | chr8_3:4005805-4005824 | Msa1270670:intron | 70.0% | |
| CTACGGTCGCAGCGGCACGA+GGG | + | chr8_3:4009543-4009562 | None:intergenic | 70.0% | |
| CCAGGCTCCTACGGTCGCAG+CGG | + | chr8_3:4009551-4009570 | None:intergenic | 70.0% | |
| CCGACCGGCCCGCTAAGTGT+AGG | - | chr8_3:4010715-4010734 | Msa1270670:intron | 70.0% | |
| CGGCCCGCTAAGTGTAGGGC+TGG | - | chr8_3:4010720-4010739 | Msa1270670:intron | 70.0% | |
| GGCTTGGCCCGATGCAGACC+AGG | - | chr8_3:4010792-4010811 | Msa1270670:five_prime_UTR | 70.0% | |
| GTCGCAGCGGCACGAGGGAC+AGG | + | chr8_3:4009538-4009557 | None:intergenic | 75.0% | |
| CCTACGGTCGCAGCGGCACG+AGG | + | chr8_3:4009544-4009563 | None:intergenic | 75.0% | |
| ! | CCTCGTGCCGCTGCGACCGT+AGG | - | chr8_3:4009541-4009560 | Msa1270670:intron | 75.0% |
| CCGCTGCGACCGTAGGAGCC+TGG | - | chr8_3:4009548-4009567 | Msa1270670:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 4004958 | 4011305 | 4004958 | ID=Msa1270670;Name=Msa1270670 |
| chr8_3 | mRNA | 4004958 | 4011305 | 4004958 | ID=Msa1270670-mRNA-1;Parent=Msa1270670;Name=Msa1270670-mRNA-1;_AED=0.11;_eAED=0.11;_QI=596|0.93|0.93|1|0.93|0.93|16|306|553 |
| chr8_3 | exon | 4004958 | 4005395 | 4004958 | ID=Msa1270670-mRNA-1:exon:1380;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4005665 | 4005823 | 4005665 | ID=Msa1270670-mRNA-1:exon:1379;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4006678 | 4006785 | 4006678 | ID=Msa1270670-mRNA-1:exon:1378;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4007137 | 4007219 | 4007137 | ID=Msa1270670-mRNA-1:exon:1377;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4007413 | 4007543 | 4007413 | ID=Msa1270670-mRNA-1:exon:1376;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4007633 | 4007700 | 4007633 | ID=Msa1270670-mRNA-1:exon:1375;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4007772 | 4007885 | 4007772 | ID=Msa1270670-mRNA-1:exon:1374;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4007980 | 4008112 | 4007980 | ID=Msa1270670-mRNA-1:exon:1373;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4008354 | 4008623 | 4008354 | ID=Msa1270670-mRNA-1:exon:1372;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4008737 | 4008841 | 4008737 | ID=Msa1270670-mRNA-1:exon:1371;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4008936 | 4009027 | 4008936 | ID=Msa1270670-mRNA-1:exon:1370;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4009122 | 4009222 | 4009122 | ID=Msa1270670-mRNA-1:exon:1369;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4009313 | 4009439 | 4009313 | ID=Msa1270670-mRNA-1:exon:1368;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4009817 | 4009857 | 4009817 | ID=Msa1270670-mRNA-1:exon:1367;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4009994 | 4010063 | 4009994 | ID=Msa1270670-mRNA-1:exon:1366;Parent=Msa1270670-mRNA-1 |
| chr8_3 | exon | 4010782 | 4011305 | 4010782 | ID=Msa1270670-mRNA-1:exon:1365;Parent=Msa1270670-mRNA-1 |
| chr8_3 | five_prime_UTR | 4010782 | 4011305 | 4010782 | ID=Msa1270670-mRNA-1:five_prime_utr;Parent=Msa1270670-mRNA-1 |
| chr8_3 | five_prime_UTR | 4009994 | 4010063 | 4009994 | ID=Msa1270670-mRNA-1:five_prime_utr;Parent=Msa1270670-mRNA-1 |
| chr8_3 | five_prime_UTR | 4009856 | 4009857 | 4009856 | ID=Msa1270670-mRNA-1:five_prime_utr;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4009817 | 4009855 | 4009817 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4009313 | 4009439 | 4009313 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4009122 | 4009222 | 4009122 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4008936 | 4009027 | 4008936 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4008737 | 4008841 | 4008737 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4008354 | 4008623 | 4008354 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4007980 | 4008112 | 4007980 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4007772 | 4007885 | 4007772 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4007633 | 4007700 | 4007633 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4007413 | 4007543 | 4007413 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4007137 | 4007219 | 4007137 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4006678 | 4006785 | 4006678 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4005665 | 4005823 | 4005665 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | CDS | 4005264 | 4005395 | 4005264 | ID=Msa1270670-mRNA-1:cds;Parent=Msa1270670-mRNA-1 |
| chr8_3 | three_prime_UTR | 4004958 | 4005263 | 4004958 | ID=Msa1270670-mRNA-1:three_prime_utr;Parent=Msa1270670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
