Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272910 | XP_003626871.1 | 98.799 | 666 | 8 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272910 | sp|O50064|FIMB2_ARATH | 78.097 | 662 | 136 | 2 | 1 | 661 | 1 | 654 | 0.0 | 1069 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272910 | G7LEC3 | 98.799 | 666 | 8 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0222560 | Msa1272910 | 0.810263 | 1.257079e-50 | -8.615850e-47 |
| Msa0430260 | Msa1272910 | 0.800357 | 1.496683e-48 | -8.615850e-47 |
| Msa0301820 | Msa1272910 | 0.803428 | 3.503030e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272910 | MtrunA17_Chr8g0338551 | 98.799 | 666 | 8 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1355 |
| Msa1272910 | MtrunA17_Chr7g0234481 | 86.207 | 667 | 83 | 5 | 1 | 663 | 1 | 662 | 0.0 | 1154 |
| Msa1272910 | MtrunA17_Chr5g0448051 | 67.470 | 664 | 211 | 2 | 1 | 664 | 1 | 659 | 0.0 | 920 |
| Msa1272910 | MtrunA17_Chr5g0445111 | 63.529 | 680 | 227 | 3 | 1 | 660 | 1 | 679 | 0.0 | 888 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272910 | AT5G48460.1 | 78.097 | 662 | 136 | 2 | 1 | 661 | 1 | 654 | 0.0 | 1069 |
| Msa1272910 | AT5G35700.1 | 66.012 | 662 | 220 | 4 | 1 | 659 | 1 | 660 | 0.0 | 900 |
| Msa1272910 | AT4G26700.4 | 67.255 | 623 | 203 | 1 | 1 | 623 | 1 | 622 | 0.0 | 881 |
| Msa1272910 | AT4G26700.2 | 67.255 | 623 | 203 | 1 | 1 | 623 | 1 | 622 | 0.0 | 881 |
| Msa1272910 | AT4G26700.1 | 67.255 | 623 | 203 | 1 | 1 | 623 | 1 | 622 | 0.0 | 881 |
| Msa1272910 | AT5G55400.1 | 65.016 | 626 | 215 | 3 | 1 | 624 | 1 | 624 | 0.0 | 860 |
| Msa1272910 | AT5G55400.2 | 65.016 | 626 | 215 | 3 | 1 | 624 | 1 | 624 | 0.0 | 860 |
| Msa1272910 | AT5G55400.3 | 65.016 | 626 | 215 | 3 | 1 | 624 | 1 | 624 | 0.0 | 860 |
| Msa1272910 | AT2G04750.1 | 63.939 | 660 | 226 | 5 | 1 | 657 | 1 | 651 | 0.0 | 860 |
| Msa1272910 | AT4G26700.5 | 66.492 | 573 | 191 | 1 | 1 | 573 | 1 | 572 | 0.0 | 796 |
| Msa1272910 | AT4G26700.6 | 66.492 | 573 | 191 | 1 | 1 | 573 | 1 | 572 | 0.0 | 796 |
| Msa1272910 | AT4G26700.3 | 66.492 | 573 | 191 | 1 | 1 | 573 | 1 | 572 | 0.0 | 796 |
| Msa1272910 | AT4G26700.7 | 72.867 | 457 | 123 | 1 | 168 | 624 | 19 | 474 | 0.0 | 704 |
Find 137 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAACTGATGCCGATATTT+TGG | 0.145068 | 8_3:+6585382 | Msa1272910:CDS |
| TGCAACCAAGTTGTTAAAAT+AGG | 0.188350 | 8_3:+6585108 | Msa1272910:CDS |
| GATTCATCTATTGATGAAAA+TGG | 0.211012 | 8_3:+6587048 | Msa1272910:CDS |
| TGCAGCCTAGAGCTGTAAAT+TGG | 0.224456 | 8_3:+6585980 | Msa1272910:CDS |
| GAATTCCTCAGCATTCTTAA+AGG | 0.241723 | 8_3:+6582613 | Msa1272910:CDS |
| CTTAACTCTGCTAAAGCTAT+TGG | 0.257781 | 8_3:+6582990 | Msa1272910:CDS |
| ATTGTTTATTATCCTAAGTT+TGG | 0.260035 | 8_3:+6587222 | Msa1272910:three_prime_UTR |
| CAAAAGACGGCGTTCTTCTT+TGG | 0.262609 | 8_3:+6582780 | Msa1272910:CDS |
| AAGAATGCTGAGGAATTCTT+TGG | 0.279033 | 8_3:-6582608 | None:intergenic |
| GAGAGAAGTTGGCAACATTA+TGG | 0.282586 | 8_3:-6581464 | None:intergenic |
| GCTTATCAATGTGGCAGTTC+CGG | 0.291492 | 8_3:+6582890 | Msa1272910:CDS |
| TTCTCATTGGTAAATGTTGC+TGG | 0.329595 | 8_3:+6585144 | Msa1272910:CDS |
| GCAACCAAGTTGTTAAAATA+GGG | 0.329708 | 8_3:+6585109 | Msa1272910:CDS |
| CATAAGATATGTCTGGTTAC+TGG | 0.330404 | 8_3:+6581633 | Msa1272910:exon |
| AAGTTGAAACTGATTATTAT+AGG | 0.330948 | 8_3:-6587278 | None:intergenic |
| CTTATCAATGTGGCAGTTCC+GGG | 0.333421 | 8_3:+6582891 | Msa1272910:CDS |
| ATCTTCCAGTTCACAATTCC+TGG | 0.337317 | 8_3:-6585039 | None:intergenic |
| AAGAAAGAGCATTTCGCCTT+TGG | 0.345628 | 8_3:+6584385 | Msa1272910:CDS |
| GGTGATATCACAGATTATTA+AGG | 0.348768 | 8_3:+6583164 | Msa1272910:CDS |
| TCTTTGCAGATGGATTCTTT+TGG | 0.353385 | 8_3:+6584996 | Msa1272910:intron |
| CCACTATGTCTCTTGCAGTT+AGG | 0.361119 | 8_3:-6583812 | None:intergenic |
| GGAGAGAGCTTCTTATGTTC+AGG | 0.364544 | 8_3:+6581956 | Msa1272910:CDS |
| TTTCAGCGTCATCTGGTGCT+TGG | 0.368288 | 8_3:+6583141 | Msa1272910:intron |
| AACCTTCAATCTTGACATCT+TGG | 0.368599 | 8_3:-6581910 | None:intergenic |
| ACAAAAGCAAGATTAAGATT+TGG | 0.372379 | 8_3:-6583843 | None:intergenic |
| CTTGTAACAAAAGGAGTAAC+TGG | 0.373563 | 8_3:+6586006 | Msa1272910:CDS |
| TTCAGCGTCATCTGGTGCTT+GGG | 0.375496 | 8_3:+6583142 | Msa1272910:intron |
| TGAATTGCTTGATGATAGTA+AGG | 0.391871 | 8_3:+6583366 | Msa1272910:CDS |
| ATTACCTCAGTGATGTCTTC+AGG | 0.392028 | 8_3:-6586356 | None:intergenic |
| GTGGAAGGATTAGTGTATTC+TGG | 0.398642 | 8_3:-6583714 | None:intergenic |
| AAAACTTAGGTTCCAAACTT+AGG | 0.404056 | 8_3:-6587234 | None:intergenic |
| ATTCTTGTTTCAGCGTCATC+TGG | 0.412164 | 8_3:+6583134 | Msa1272910:intron |
| GAAGTGAAGGAGAGAGAAGT+TGG | 0.417956 | 8_3:-6581475 | None:intergenic |
| AATAGCAAAGTTAGCAGTAC+AGG | 0.418589 | 8_3:+6585413 | Msa1272910:CDS |
| TCTTTCTTCTCTAGAGTCTT+CGG | 0.422553 | 8_3:-6584370 | None:intergenic |
| ATAAGATATGTCTGGTTACT+GGG | 0.422743 | 8_3:+6581634 | Msa1272910:exon |
| AGAGAAGTTGGCAACATTAT+GGG | 0.424202 | 8_3:-6581463 | None:intergenic |
| TGAGTATGAGGAGGGAAAGT+GGG | 0.424623 | 8_3:+6581862 | Msa1272910:CDS |
| CTCATTGGTTGAAGGATCAA+TGG | 0.425456 | 8_3:-6582744 | None:intergenic |
| TGCAATTTCGAAGAGCTCAT+TGG | 0.426990 | 8_3:-6582759 | None:intergenic |
| GCAGCCTAGAGCTGTAAATT+GGG | 0.429402 | 8_3:+6585981 | Msa1272910:CDS |
| TGTACTCTGATTTCTTCAAA+TGG | 0.432801 | 8_3:-6583528 | None:intergenic |
| GAAACAGCTTAAATTCTCAT+TGG | 0.434900 | 8_3:+6585131 | Msa1272910:CDS |
| ATTAGCCCATTCCAAAATAT+CGG | 0.435292 | 8_3:-6585393 | None:intergenic |
| CACCTTAACAATATCTTCTC+TGG | 0.440303 | 8_3:-6583496 | None:intergenic |
| GTCTTTGAGGATCTTAGAAA+CGG | 0.441674 | 8_3:+6584444 | Msa1272910:CDS |
| TTCCAAGATGTCAAGATTGA+AGG | 0.444372 | 8_3:+6581908 | Msa1272910:CDS |
| CCTCATTATAGTTGATCAAA+AGG | 0.447137 | 8_3:+6587131 | Msa1272910:three_prime_UTR |
| ATGAGTATGAGGAGGGAAAG+TGG | 0.451963 | 8_3:+6581861 | Msa1272910:CDS |
| CTAGAGTCTTCGGTGTCGTC+AGG | 0.452070 | 8_3:-6584360 | None:intergenic |
| ATATATCAACAATGTCTTTG+AGG | 0.454054 | 8_3:+6584431 | Msa1272910:CDS |
| AAGATTATTCTGACCTGTGC+TGG | 0.454320 | 8_3:-6583878 | None:intergenic |
| CCCACTGTCCTTTCTTCATG+AGG | 0.462266 | 8_3:-6586952 | None:intergenic |
| GCTATTAAGTGTGGTGAGAA+GGG | 0.468638 | 8_3:-6581497 | None:intergenic |
| TTAAATGGCATCTTAATTGG+AGG | 0.469515 | 8_3:-6585072 | None:intergenic |
| TCTTGAACATTCTGACAAGA+TGG | 0.470848 | 8_3:+6583776 | Msa1272910:CDS |
| TAGTGAGAGTGGGAGTCAAT+TGG | 0.471021 | 8_3:+6586987 | Msa1272910:CDS |
| AGCTATTAAGTGTGGTGAGA+AGG | 0.478453 | 8_3:-6581498 | None:intergenic |
| AAAGGTCAATGCATGATACT+AGG | 0.479755 | 8_3:+6587149 | Msa1272910:three_prime_UTR |
| CGAAAAGATTACTCAATCCA+TGG | 0.483964 | 8_3:+6582940 | Msa1272910:CDS |
| ATCAGTATTGCAAGAAAGCT+AGG | 0.485962 | 8_3:+6586314 | Msa1272910:CDS |
| CCACTGTCCTTTCTTCATGA+GGG | 0.487879 | 8_3:-6586951 | None:intergenic |
| CTTGACATCGGAGGAGAAGT+TGG | 0.490091 | 8_3:-6583563 | None:intergenic |
| TTGTGTAGTTTATGAGTATG+AGG | 0.492802 | 8_3:+6581850 | Msa1272910:intron |
| CATAAGGCATAAGATATGTC+TGG | 0.494174 | 8_3:+6581626 | Msa1272910:exon |
| ATGTCAAGATTGAAGGTTGT+GGG | 0.496565 | 8_3:+6581915 | Msa1272910:CDS |
| CAGGACAAAAGTTTATCTGA+TGG | 0.500132 | 8_3:+6585928 | Msa1272910:intron |
| TGTGGTGAGAAGGGAAGTGA+AGG | 0.502757 | 8_3:-6581488 | None:intergenic |
| CGCCTTTGGATTAATAGCCT+CGG | 0.505345 | 8_3:+6584399 | Msa1272910:CDS |
| TGATGCTAGCTGTTAGAGTA+AGG | 0.506551 | 8_3:-6586909 | None:intergenic |
| AATTGGGGACTTGTAACAAA+AGG | 0.507836 | 8_3:+6585997 | Msa1272910:CDS |
| CAAGGCACATTACAAAACTT+AGG | 0.507961 | 8_3:-6587247 | None:intergenic |
| TCTTTGAGGATCTTAGAAAC+GGG | 0.508869 | 8_3:+6584445 | Msa1272910:CDS |
| TGTCACCAGGAATTGTGAAC+TGG | 0.509935 | 8_3:+6585034 | Msa1272910:CDS |
| GGCACACAAGACTTCATTGA+AGG | 0.515640 | 8_3:+6583032 | Msa1272910:CDS |
| CTGGTGCAAGAACATTTAGA+AGG | 0.520054 | 8_3:-6583695 | None:intergenic |
| CACCAGAGAAGATATTGTTA+AGG | 0.520388 | 8_3:+6583494 | Msa1272910:CDS |
| TCGAAGAGCTCATTGGTTGA+AGG | 0.520913 | 8_3:-6582752 | None:intergenic |
| TGTCGTCAGGAATTGCTTGA+AGG | 0.523272 | 8_3:-6584347 | None:intergenic |
| ACATTTGCAAATTCTAGAGC+AGG | 0.524518 | 8_3:+6582578 | Msa1272910:CDS |
| AACTTGCGATTTCACGCTCG+TGG | 0.531515 | 8_3:+6585353 | Msa1272910:CDS |
| CAGTGATGTCTTCAGGAAGC+AGG | 0.536396 | 8_3:-6586349 | None:intergenic |
| TAAAACACCCTCATGAAGAA+AGG | 0.536903 | 8_3:+6586944 | Msa1272910:CDS |
| TCATTGGTTGAAGGATCAAT+GGG | 0.541850 | 8_3:-6582743 | None:intergenic |
| CTTGAACATTCTGACAAGAT+GGG | 0.542230 | 8_3:+6583777 | Msa1272910:CDS |
| TGCTGGAAATGACATTGTGC+AGG | 0.543050 | 8_3:+6585161 | Msa1272910:CDS |
| GGAACTTCAGATAGTGAGAG+TGG | 0.543630 | 8_3:+6586976 | Msa1272910:CDS |
| GATGTCAAGATTGAAGGTTG+TGG | 0.543956 | 8_3:+6581914 | Msa1272910:CDS |
| AAATTTGAAACAGAAACATA+AGG | 0.545491 | 8_3:+6581610 | Msa1272910:five_prime_UTR |
| TGCAATACTGATGATGTAGC+TGG | 0.551121 | 8_3:-6586303 | None:intergenic |
| ACTCTTGAGAAGGTGTCACC+AGG | 0.555167 | 8_3:+6585021 | Msa1272910:CDS |
| CAGAGAAGATATTGTTAAGG+TGG | 0.556728 | 8_3:+6583497 | Msa1272910:CDS |
| TTGAAACTGATTATTATAGG+AGG | 0.557281 | 8_3:-6587275 | None:intergenic |
| TTCCGAGGCTATTAATCCAA+AGG | 0.563447 | 8_3:-6584401 | None:intergenic |
| TAACAGCTAGCATCATGTCT+TGG | 0.567300 | 8_3:+6586917 | Msa1272910:CDS |
| CACAAGACTTCATTGAAGGA+AGG | 0.568450 | 8_3:+6583036 | Msa1272910:CDS |
| TGATATATGTTGAATTTCCG+AGG | 0.570261 | 8_3:-6584416 | None:intergenic |
| GATTACTCAATCCATGGGAA+AGG | 0.571585 | 8_3:+6582946 | Msa1272910:CDS |
| AGTCCCCAATTTACAGCTCT+AGG | 0.572192 | 8_3:-6585985 | None:intergenic |
| CAACTTCTCCTCCGATGTCA+AGG | 0.574650 | 8_3:+6583564 | Msa1272910:CDS |
| TGTAGTTTATGAGTATGAGG+AGG | 0.580173 | 8_3:+6581853 | Msa1272910:intron |
| CCTAACTGCAAGAGACATAG+TGG | 0.583118 | 8_3:+6583812 | Msa1272910:CDS |
| ATCAAACTTTAGCTTATCTG+TGG | 0.587806 | 8_3:+6585294 | Msa1272910:intron |
| GAAAAGATTACTCAATCCAT+GGG | 0.588049 | 8_3:+6582941 | Msa1272910:CDS |
| GGGAGAAAATCTGAGTGAGA+AGG | 0.588682 | 8_3:+6581935 | Msa1272910:CDS |
| CTCTTCGAAATTGCAAAAGA+CGG | 0.590029 | 8_3:+6582767 | Msa1272910:CDS |
| GTAGTTTATGAGTATGAGGA+GGG | 0.590304 | 8_3:+6581854 | Msa1272910:intron |
| ACTTGCGATTTCACGCTCGT+GGG | 0.599082 | 8_3:+6585354 | Msa1272910:CDS |
| AAAATTAGTTACCTTGACAT+CGG | 0.612532 | 8_3:-6583575 | None:intergenic |
| ACAAGACTTCATTGAAGGAA+GGG | 0.614619 | 8_3:+6583037 | Msa1272910:CDS |
| GTATCAGAACACTGATGAGG+AGG | 0.616941 | 8_3:+6581983 | Msa1272910:CDS |
| GCACAGAACTAAGAAGCTCA+AGG | 0.617258 | 8_3:-6585960 | None:intergenic |
| TCAGTATTGCAAGAAAGCTA+GGG | 0.618399 | 8_3:+6586315 | Msa1272910:CDS |
| GAACTTCAGATAGTGAGAGT+GGG | 0.620450 | 8_3:+6586977 | Msa1272910:CDS |
| GCACGCTCGTCAATAGTCCC+CGG | 0.623143 | 8_3:-6582909 | None:intergenic |
| TCAGCGTCATCTGGTGCTTG+GGG | 0.626477 | 8_3:+6583143 | Msa1272910:intron |
| CAGCCTAGAGCTGTAAATTG+GGG | 0.627141 | 8_3:+6585982 | Msa1272910:CDS |
| GTGAACTGATTCTGAAGACA+TGG | 0.629933 | 8_3:-6581674 | None:intergenic |
| CAATGGGAAGATACTTCTTG+AGG | 0.633142 | 8_3:-6582727 | None:intergenic |
| TCAAGCAATTCAAGAAGCTG+AGG | 0.634759 | 8_3:-6583355 | None:intergenic |
| ATTAGTTACCTTGACATCGG+AGG | 0.637892 | 8_3:-6583572 | None:intergenic |
| ACTGCAAGAGACATAGTGGA+AGG | 0.641043 | 8_3:+6583816 | Msa1272910:CDS |
| CCTCATGAAGAAAGGACAGT+GGG | 0.641156 | 8_3:+6586952 | Msa1272910:CDS |
| TTATTATAGGAGGAAATCCA+AGG | 0.645669 | 8_3:-6587265 | None:intergenic |
| AGCTGCCTTTAAGAATGCTG+AGG | 0.647530 | 8_3:-6582618 | None:intergenic |
| GGATGTACAGTAGTCAACAT+TGG | 0.648422 | 8_3:+6583011 | Msa1272910:CDS |
| TTATCAATGTGGCAGTTCCG+GGG | 0.652098 | 8_3:+6582892 | Msa1272910:CDS |
| TAAGATATGTCTGGTTACTG+GGG | 0.662872 | 8_3:+6581635 | Msa1272910:exon |
| CATGAAGAAAGGACAGTGGG+AGG | 0.669124 | 8_3:+6586955 | Msa1272910:CDS |
| TTTGTATCAGAACACTGATG+AGG | 0.669477 | 8_3:+6581980 | Msa1272910:CDS |
| TATGACACTACAGGATGCTG+AGG | 0.679894 | 8_3:+6583662 | Msa1272910:intron |
| GCTGGAAATGACATTGTGCA+GGG | 0.692017 | 8_3:+6585162 | Msa1272910:CDS |
| ATACACTAATCCTTCCACAC+TGG | 0.693042 | 8_3:+6583719 | Msa1272910:CDS |
| TTGCAGCAAGCTTATCAATG+TGG | 0.706692 | 8_3:+6582881 | Msa1272910:intron |
| CCCTCATGAAGAAAGGACAG+TGG | 0.709192 | 8_3:+6586951 | Msa1272910:CDS |
| ACTTATTGTGTGAAGCAATG+TGG | 0.720357 | 8_3:-6582645 | None:intergenic |
| GCTTCCTGAAGACATCACTG+AGG | 0.793102 | 8_3:+6586352 | Msa1272910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATTTATTTATTTATTT+CGG | + | chr8_3:6583074-6583093 | Msa1272910:intron | 0.0% |
| !! | AGATAGTATTAATAAAAAAA+TGG | - | chr8_3:6587100-6587119 | None:intergenic | 10.0% |
| !!! | TTTTTGATGTTATTGAAATT+TGG | + | chr8_3:6581803-6581822 | Msa1272910:intron | 15.0% |
| !!! | TATTATAAGCTATTTGATTT+AGG | + | chr8_3:6582243-6582262 | Msa1272910:intron | 15.0% |
| !! | AATAATATTTCCATGAATAA+TGG | - | chr8_3:6582843-6582862 | None:intergenic | 15.0% |
| !! | AAAATTCAAGATTTATTTGT+AGG | - | chr8_3:6583258-6583277 | None:intergenic | 15.0% |
| !! | TTTAATTATTGCATGTTTAT+TGG | + | chr8_3:6586067-6586086 | Msa1272910:intron | 15.0% |
| !!! | TTACGAAAAATTAAACTTTT+AGG | + | chr8_3:6586465-6586484 | Msa1272910:intron | 15.0% |
| !!! | AAATTTGAAACAGAAACATA+AGG | + | chr8_3:6581610-6581629 | Msa1272910:five_prime_UTR | 20.0% |
| !! | ATGATAAATAAAACAGTAAG+AGG | - | chr8_3:6582119-6582138 | None:intergenic | 20.0% |
| !!! | ATTTATCATATCACTTTTTG+AGG | + | chr8_3:6582130-6582149 | Msa1272910:intron | 20.0% |
| !!! | GAAATTCACATTTTTTAAAG+TGG | + | chr8_3:6582178-6582197 | Msa1272910:intron | 20.0% |
| !! | TCTTGTATTTCTTCAAAATA+AGG | - | chr8_3:6582463-6582482 | None:intergenic | 20.0% |
| !!! | AAAATGAACATTTTAAAGAG+AGG | + | chr8_3:6582484-6582503 | Msa1272910:intron | 20.0% |
| !!! | TTCATATATTTTAAACCAAC+AGG | + | chr8_3:6583447-6583466 | Msa1272910:intron | 20.0% |
| !! | ATACTATAATATTACTCAAG+AGG | - | chr8_3:6583904-6583923 | None:intergenic | 20.0% |
| !! | TTTAGGAAAAATACATTATG+CGG | + | chr8_3:6583936-6583955 | Msa1272910:intron | 20.0% |
| !! | ACAAAAAAAGTCAAAGAATA+AGG | - | chr8_3:6584509-6584528 | None:intergenic | 20.0% |
| !!! | TTTTGTTAAAAGATCTTGTA+TGG | + | chr8_3:6584523-6584542 | Msa1272910:intron | 20.0% |
| !! | TTTCTTTGTTGAAATTATTC+TGG | + | chr8_3:6584655-6584674 | Msa1272910:intron | 20.0% |
| !!! | TTTTTAAATGGCATCTTAAT+TGG | - | chr8_3:6585078-6585097 | None:intergenic | 20.0% |
| !!! | CAATTCTCAACTTTTTTAAA+TGG | - | chr8_3:6585090-6585109 | None:intergenic | 20.0% |
| !! | GGAAATAAAAAGTTAATACT+AGG | + | chr8_3:6585183-6585202 | Msa1272910:CDS | 20.0% |
| !! | ATAAAAAGTTAATACTAGGT+AGG | + | chr8_3:6585187-6585206 | Msa1272910:intron | 20.0% |
| !! | AAATCATTATCCAAATTACT+CGG | + | chr8_3:6585222-6585241 | Msa1272910:intron | 20.0% |
| !! | GCATAATCTAATTAAATCAT+TGG | + | chr8_3:6585263-6585282 | Msa1272910:intron | 20.0% |
| !! | AGAACACATAAAAATTTATG+CGG | + | chr8_3:6585595-6585614 | Msa1272910:intron | 20.0% |
| !!! | TTGTTATAATCTCAATTTTC+AGG | + | chr8_3:6585909-6585928 | Msa1272910:intron | 20.0% |
| !! | TTTGTCAATACAAATGTTAT+AGG | - | chr8_3:6586246-6586265 | None:intergenic | 20.0% |
| !!! | TTCAATGTTGTTTATTTCTT+CGG | + | chr8_3:6586426-6586445 | Msa1272910:intron | 20.0% |
| !!! | TAATTTTTCGTAAAAGAAGT+TGG | - | chr8_3:6586458-6586477 | None:intergenic | 20.0% |
| !! | ATTGTTTATTATCCTAAGTT+TGG | + | chr8_3:6587222-6587241 | Msa1272910:three_prime_UTR | 20.0% |
| ! | TTTGAAAAAGCTATTAAGTG+TGG | - | chr8_3:6581509-6581528 | None:intergenic | 25.0% |
| ! | ATCAAAAATCCAATCTTTCA+AGG | - | chr8_3:6581791-6581810 | None:intergenic | 25.0% |
| !! | TGTTATTGAAATTTGGAATC+TGG | + | chr8_3:6581810-6581829 | Msa1272910:intron | 25.0% |
| !! | GTTATTGAAATTTGGAATCT+GGG | + | chr8_3:6581811-6581830 | Msa1272910:intron | 25.0% |
| !!! | TGATTTTGAATTGTTTCTCA+AGG | + | chr8_3:6582007-6582026 | Msa1272910:CDS | 25.0% |
| !! | GTTCAATTATCAACTTTTTG+AGG | + | chr8_3:6582066-6582085 | Msa1272910:intron | 25.0% |
| !!! | TACTTGATCTGATTGTTTTA+TGG | - | chr8_3:6582225-6582244 | None:intergenic | 25.0% |
| ! | TCTTCAAAATAAGGAAAACT+CGG | - | chr8_3:6582454-6582473 | None:intergenic | 25.0% |
| ! | ACTACTATTTCCATTATTCA+TGG | + | chr8_3:6582830-6582849 | Msa1272910:intron | 25.0% |
| !! | GTAAACAGTCATTGATTAAA+CGG | + | chr8_3:6583186-6583205 | Msa1272910:intron | 25.0% |
| ! | ATACTGAAAAAATCTACTGA+TGG | + | chr8_3:6583286-6583305 | Msa1272910:intron | 25.0% |
| !! | TTTTGAATAGATACAACTAC+TGG | + | chr8_3:6583309-6583328 | Msa1272910:intron | 25.0% |
| !!! | TATTTTAAACCAACAGGATA+TGG | + | chr8_3:6583453-6583472 | Msa1272910:intron | 25.0% |
| ! | AAAATTAGTTACCTTGACAT+CGG | - | chr8_3:6583578-6583597 | None:intergenic | 25.0% |
| !! | ACTAATTTTGCTCTTTCAAA+GGG | - | chr8_3:6583756-6583775 | None:intergenic | 25.0% |
| !! | AACTAATTTTGCTCTTTCAA+AGG | - | chr8_3:6583757-6583776 | None:intergenic | 25.0% |
| ! | ACAAAAGCAAGATTAAGATT+TGG | - | chr8_3:6583846-6583865 | None:intergenic | 25.0% |
| !!! | CTCTTAAGTTTTTTAGTAAC+AGG | + | chr8_3:6583991-6584010 | Msa1272910:intron | 25.0% |
| ! | GTAACTGAATCTGTTAAAAA+GGG | - | chr8_3:6584052-6584071 | None:intergenic | 25.0% |
| ! | TGTAACTGAATCTGTTAAAA+AGG | - | chr8_3:6584053-6584072 | None:intergenic | 25.0% |
| ! | ACAATCTATAAGATGAAGAA+AGG | - | chr8_3:6584201-6584220 | None:intergenic | 25.0% |
| !! | AGAGATCCAAATTTTCTTTT+TGG | + | chr8_3:6584235-6584254 | Msa1272910:intron | 25.0% |
| ! | CAGAAACCAAAAAGAAAATT+TGG | - | chr8_3:6584244-6584263 | None:intergenic | 25.0% |
| ! | ATATATCAACAATGTCTTTG+AGG | + | chr8_3:6584431-6584450 | Msa1272910:CDS | 25.0% |
| ! | TTATTCTGGCATTTATAGTA+AGG | + | chr8_3:6584669-6584688 | Msa1272910:intron | 25.0% |
| !!! | CTTTAGAATGGTATATGTTA+GGG | + | chr8_3:6585491-6585510 | Msa1272910:intron | 25.0% |
| ! | AACAGTATTATTGTATCTGA+AGG | - | chr8_3:6585706-6585725 | None:intergenic | 25.0% |
| ! | TCTTAGATTAAAACCGAATT+TGG | - | chr8_3:6586534-6586553 | None:intergenic | 25.0% |
| ! | AGATGAATAATCATAGAGTT+TGG | + | chr8_3:6586570-6586589 | Msa1272910:intron | 25.0% |
| ! | GATTCATCTATTGATGAAAA+TGG | + | chr8_3:6587048-6587067 | Msa1272910:CDS | 25.0% |
| ! | ATAAAAAAATGGTTCACTTG+TGG | - | chr8_3:6587089-6587108 | None:intergenic | 25.0% |
| !! | CTTTTGATCAACTATAATGA+GGG | - | chr8_3:6587133-6587152 | None:intergenic | 25.0% |
| ATAAGATATGTCTGGTTACT+GGG | + | chr8_3:6581634-6581653 | Msa1272910:exon | 30.0% | |
| CTTTCAAGGAAAAACAACAT+GGG | - | chr8_3:6581777-6581796 | None:intergenic | 30.0% | |
| TCTTTCAAGGAAAAACAACA+TGG | - | chr8_3:6581778-6581797 | None:intergenic | 30.0% | |
| !!! | GTTGTTTTTCCTTGAAAGAT+TGG | + | chr8_3:6581779-6581798 | Msa1272910:intron | 30.0% |
| TTGTGTAGTTTATGAGTATG+AGG | + | chr8_3:6581850-6581869 | Msa1272910:intron | 30.0% | |
| ! | TTTGAATTGTTTCTCAAGGT+AGG | + | chr8_3:6582011-6582030 | Msa1272910:intron | 30.0% |
| ATCAGGAAAAAGCAAGAAAA+AGG | - | chr8_3:6582096-6582115 | None:intergenic | 30.0% | |
| AATAAAACAGTAAGAGGATC+AGG | - | chr8_3:6582113-6582132 | None:intergenic | 30.0% | |
| ! | AAGCACTTTAGAGATTGTTT+GGG | - | chr8_3:6582396-6582415 | None:intergenic | 30.0% |
| ! | TAAGCACTTTAGAGATTGTT+TGG | - | chr8_3:6582397-6582416 | None:intergenic | 30.0% |
| AAAATAAGGAAAACTCGGTT+TGG | - | chr8_3:6582449-6582468 | None:intergenic | 30.0% | |
| GAAAAGATTACTCAATCCAT+GGG | + | chr8_3:6582941-6582960 | Msa1272910:CDS | 30.0% | |
| GGTGATATCACAGATTATTA+AGG | + | chr8_3:6583164-6583183 | Msa1272910:CDS | 30.0% | |
| ! | TGAATTGCTTGATGATAGTA+AGG | + | chr8_3:6583366-6583385 | Msa1272910:CDS | 30.0% |
| TGTACTCTGATTTCTTCAAA+TGG | - | chr8_3:6583531-6583550 | None:intergenic | 30.0% | |
| ! | GATGTCAAGGTAACTAATTT+TGG | + | chr8_3:6583577-6583596 | Msa1272910:intron | 30.0% |
| !!! | GTGTAGGTTTTAAGACTTAA+AGG | - | chr8_3:6584022-6584041 | None:intergenic | 30.0% |
| GAATCTGTTAAAAAGGGTAA+CGG | - | chr8_3:6584046-6584065 | None:intergenic | 30.0% | |
| GTTAAATATCTAGTCCACAT+AGG | - | chr8_3:6584102-6584121 | None:intergenic | 30.0% | |
| AAAATTGACCACATGAATCA+TGG | - | chr8_3:6584146-6584165 | None:intergenic | 30.0% | |
| !! | TATATCCATTTTTCTCGTGT+AGG | + | chr8_3:6584289-6584308 | Msa1272910:intron | 30.0% |
| TGATATATGTTGAATTTCCG+AGG | - | chr8_3:6584419-6584438 | None:intergenic | 30.0% | |
| CATTTATAGTAAGGTCTGTT+TGG | + | chr8_3:6584678-6584697 | Msa1272910:intron | 30.0% | |
| AACAAGCTGAAAACATCTTA+TGG | - | chr8_3:6584788-6584807 | None:intergenic | 30.0% | |
| TTACATCCATTGAGTTTGTA+TGG | + | chr8_3:6584966-6584985 | Msa1272910:intron | 30.0% | |
| TTAAATGGCATCTTAATTGG+AGG | - | chr8_3:6585075-6585094 | None:intergenic | 30.0% | |
| TGCAACCAAGTTGTTAAAAT+AGG | + | chr8_3:6585108-6585127 | Msa1272910:CDS | 30.0% | |
| GCAACCAAGTTGTTAAAATA+GGG | + | chr8_3:6585109-6585128 | Msa1272910:CDS | 30.0% | |
| !!! | GTTTCCCTATTTTAACAACT+TGG | - | chr8_3:6585116-6585135 | None:intergenic | 30.0% |
| GAAACAGCTTAAATTCTCAT+TGG | + | chr8_3:6585131-6585150 | Msa1272910:CDS | 30.0% | |
| ! | TTAATTAGTGCCGAGTAATT+TGG | - | chr8_3:6585235-6585254 | None:intergenic | 30.0% |
| ! | ATCAAACTTTAGCTTATCTG+TGG | + | chr8_3:6585294-6585313 | Msa1272910:intron | 30.0% |
| ! | AATAACTGATGCCGATATTT+TGG | + | chr8_3:6585382-6585401 | Msa1272910:CDS | 30.0% |
| ATTAGCCCATTCCAAAATAT+CGG | - | chr8_3:6585396-6585415 | None:intergenic | 30.0% | |
| CCTAACATATACCATTCTAA+AGG | - | chr8_3:6585493-6585512 | None:intergenic | 30.0% | |
| !! | CCTTTAGAATGGTATATGTT+AGG | + | chr8_3:6585490-6585509 | Msa1272910:intron | 30.0% |
| CAAATTAATGCACACATCTA+AGG | + | chr8_3:6585531-6585550 | Msa1272910:intron | 30.0% | |
| TTCTCTTATCACTTTCTTTG+TGG | - | chr8_3:6585579-6585598 | None:intergenic | 30.0% | |
| GATTACTTGTGCAATACATT+TGG | - | chr8_3:6586148-6586167 | None:intergenic | 30.0% | |
| ATTAGCTAGCATACCAAATT+CGG | + | chr8_3:6586518-6586537 | Msa1272910:intron | 30.0% | |
| ! | TTAATCTAAGATAAACTCGC+AGG | + | chr8_3:6586543-6586562 | Msa1272910:intron | 30.0% |
| ! | TGTAGTTTTCTATTACGCAA+TGG | + | chr8_3:6586630-6586649 | Msa1272910:intron | 30.0% |
| ! | TTTCTATTACGCAATGGATT+AGG | + | chr8_3:6586636-6586655 | Msa1272910:intron | 30.0% |
| !! | TTCTATTACGCAATGGATTA+GGG | + | chr8_3:6586637-6586656 | Msa1272910:intron | 30.0% |
| GATTAGGGTTACAAAGTTTA+AGG | + | chr8_3:6586652-6586671 | Msa1272910:intron | 30.0% | |
| AATCTTGGAAATTGAACGAT+AGG | - | chr8_3:6586690-6586709 | None:intergenic | 30.0% | |
| ! | AGTTGGTTCAACAATAATCT+TGG | - | chr8_3:6586705-6586724 | None:intergenic | 30.0% |
| TTCACCTGAAATTGTATAAC+CGG | - | chr8_3:6586877-6586896 | None:intergenic | 30.0% | |
| ! | CCTTTTGATCAACTATAATG+AGG | - | chr8_3:6587134-6587153 | None:intergenic | 30.0% |
| CCTCATTATAGTTGATCAAA+AGG | + | chr8_3:6587131-6587150 | Msa1272910:three_prime_UTR | 30.0% | |
| AAAACTTAGGTTCCAAACTT+AGG | - | chr8_3:6587237-6587256 | None:intergenic | 30.0% | |
| TTATTATAGGAGGAAATCCA+AGG | - | chr8_3:6587268-6587287 | None:intergenic | 30.0% | |
| AGAGAAGTTGGCAACATTAT+GGG | - | chr8_3:6581466-6581485 | None:intergenic | 35.0% | |
| CATAAGGCATAAGATATGTC+TGG | + | chr8_3:6581626-6581645 | Msa1272910:exon | 35.0% | |
| CATAAGATATGTCTGGTTAC+TGG | + | chr8_3:6581633-6581652 | Msa1272910:exon | 35.0% | |
| TAAGATATGTCTGGTTACTG+GGG | + | chr8_3:6581635-6581654 | Msa1272910:exon | 35.0% | |
| TGTAGTTTATGAGTATGAGG+AGG | + | chr8_3:6581853-6581872 | Msa1272910:intron | 35.0% | |
| GTAGTTTATGAGTATGAGGA+GGG | + | chr8_3:6581854-6581873 | Msa1272910:intron | 35.0% | |
| TTCCAAGATGTCAAGATTGA+AGG | + | chr8_3:6581908-6581927 | Msa1272910:CDS | 35.0% | |
| AACCTTCAATCTTGACATCT+TGG | - | chr8_3:6581913-6581932 | None:intergenic | 35.0% | |
| ATGTCAAGATTGAAGGTTGT+GGG | + | chr8_3:6581915-6581934 | Msa1272910:CDS | 35.0% | |
| TTTGTATCAGAACACTGATG+AGG | + | chr8_3:6581980-6581999 | Msa1272910:CDS | 35.0% | |
| ! | TATTTGATTTAGGCCCTGTT+TGG | + | chr8_3:6582253-6582272 | Msa1272910:intron | 35.0% |
| TTAACCTGTCTATCCAAACA+GGG | - | chr8_3:6582269-6582288 | None:intergenic | 35.0% | |
| ATTAACCTGTCTATCCAAAC+AGG | - | chr8_3:6582270-6582289 | None:intergenic | 35.0% | |
| CACTTATCATAGATGTGCTT+TGG | + | chr8_3:6582309-6582328 | Msa1272910:intron | 35.0% | |
| GTTTATTTGAGTGTACCTAC+TGG | - | chr8_3:6582422-6582441 | None:intergenic | 35.0% | |
| ACTAGTGCTGTAATGATTAC+AGG | + | chr8_3:6582538-6582557 | Msa1272910:intron | 35.0% | |
| !! | ACATTTGCAAATTCTAGAGC+AGG | + | chr8_3:6582578-6582597 | Msa1272910:CDS | 35.0% |
| AAGAATGCTGAGGAATTCTT+TGG | - | chr8_3:6582611-6582630 | None:intergenic | 35.0% | |
| GAATTCCTCAGCATTCTTAA+AGG | + | chr8_3:6582613-6582632 | Msa1272910:CDS | 35.0% | |
| ACTTATTGTGTGAAGCAATG+TGG | - | chr8_3:6582648-6582667 | None:intergenic | 35.0% | |
| ! | TCATTGGTTGAAGGATCAAT+GGG | - | chr8_3:6582746-6582765 | None:intergenic | 35.0% |
| CTCTTCGAAATTGCAAAAGA+CGG | + | chr8_3:6582767-6582786 | Msa1272910:CDS | 35.0% | |
| GGAAATAGTAGTAAGCTAGA+TGG | - | chr8_3:6582822-6582841 | None:intergenic | 35.0% | |
| CGAAAAGATTACTCAATCCA+TGG | + | chr8_3:6582940-6582959 | Msa1272910:CDS | 35.0% | |
| ! | TGATTTTCATTCCTTTCCCA+TGG | - | chr8_3:6582960-6582979 | None:intergenic | 35.0% |
| CTTAACTCTGCTAAAGCTAT+TGG | + | chr8_3:6582990-6583009 | Msa1272910:CDS | 35.0% | |
| ACAAGACTTCATTGAAGGAA+GGG | + | chr8_3:6583037-6583056 | Msa1272910:CDS | 35.0% | |
| ! | GAGGAGTTTTCTTTAGATTG+AGG | - | chr8_3:6583339-6583358 | None:intergenic | 35.0% |
| CACCAGAGAAGATATTGTTA+AGG | + | chr8_3:6583494-6583513 | Msa1272910:CDS | 35.0% | |
| CACCTTAACAATATCTTCTC+TGG | - | chr8_3:6583499-6583518 | None:intergenic | 35.0% | |
| CAGAGAAGATATTGTTAAGG+TGG | + | chr8_3:6583497-6583516 | Msa1272910:CDS | 35.0% | |
| !!! | TTTTTTATAGCCAGTGTGGA+AGG | - | chr8_3:6583732-6583751 | None:intergenic | 35.0% |
| TCTTGAACATTCTGACAAGA+TGG | + | chr8_3:6583776-6583795 | Msa1272910:CDS | 35.0% | |
| CTTGAACATTCTGACAAGAT+GGG | + | chr8_3:6583777-6583796 | Msa1272910:CDS | 35.0% | |
| !! | TCTTTCTTCTCTAGAGTCTT+CGG | - | chr8_3:6584373-6584392 | None:intergenic | 35.0% |
| ! | GTCTTTGAGGATCTTAGAAA+CGG | + | chr8_3:6584444-6584463 | Msa1272910:CDS | 35.0% |
| ! | TCTTTGAGGATCTTAGAAAC+GGG | + | chr8_3:6584445-6584464 | Msa1272910:CDS | 35.0% |
| TTCAATTACTTGCACTTAGC+AGG | - | chr8_3:6584560-6584579 | None:intergenic | 35.0% | |
| AGTCTCATAAGTGCTTATAC+TGG | - | chr8_3:6584730-6584749 | None:intergenic | 35.0% | |
| !! | GCTGTTTTACTAAGCTATCT+TGG | - | chr8_3:6584823-6584842 | None:intergenic | 35.0% |
| ! | AAACAAGTGTGTCACTATCT+AGG | - | chr8_3:6584936-6584955 | None:intergenic | 35.0% |
| TCAACACCATACAAACTCAA+TGG | - | chr8_3:6584975-6584994 | None:intergenic | 35.0% | |
| !! | TCTTTGCAGATGGATTCTTT+TGG | + | chr8_3:6584996-6585015 | Msa1272910:intron | 35.0% |
| TTCTCATTGGTAAATGTTGC+TGG | + | chr8_3:6585144-6585163 | Msa1272910:CDS | 35.0% | |
| !!! | TGATGCCGATATTTTGGAAT+GGG | + | chr8_3:6585388-6585407 | Msa1272910:CDS | 35.0% |
| AATAGCAAAGTTAGCAGTAC+AGG | + | chr8_3:6585413-6585432 | Msa1272910:CDS | 35.0% | |
| ! | AAGCAGCATGAACAGTTTTA+AGG | + | chr8_3:6585442-6585461 | Msa1272910:CDS | 35.0% |
| ! | AGGCTGCTTTGAATATTGAA+AGG | - | chr8_3:6585473-6585492 | None:intergenic | 35.0% |
| ! | ATTCAAAGCAGCCTTTAGAA+TGG | + | chr8_3:6585479-6585498 | Msa1272910:intron | 35.0% |
| !! | CATTAATTTGTCAGTGTGTG+TGG | - | chr8_3:6585521-6585540 | None:intergenic | 35.0% |
| ! | TTCATTTTCTTCCCATTCTC+AGG | + | chr8_3:6585856-6585875 | Msa1272910:intron | 35.0% |
| ! | TCATTTTCTTCCCATTCTCA+GGG | + | chr8_3:6585857-6585876 | Msa1272910:intron | 35.0% |
| ACCATTTAATCCCTGAGAAT+GGG | - | chr8_3:6585870-6585889 | None:intergenic | 35.0% | |
| AACCATTTAATCCCTGAGAA+TGG | - | chr8_3:6585871-6585890 | None:intergenic | 35.0% | |
| CAGGACAAAAGTTTATCTGA+TGG | + | chr8_3:6585928-6585947 | Msa1272910:intron | 35.0% | |
| AATTGGGGACTTGTAACAAA+AGG | + | chr8_3:6585997-6586016 | Msa1272910:CDS | 35.0% | |
| CTTGTAACAAAAGGAGTAAC+TGG | + | chr8_3:6586006-6586025 | Msa1272910:CDS | 35.0% | |
| ! | TGTTATAGGAGTGTAAAGCA+AGG | - | chr8_3:6586232-6586251 | None:intergenic | 35.0% |
| ! | TCTTTTTCTCTTCATCTGCA+TGG | - | chr8_3:6586277-6586296 | None:intergenic | 35.0% |
| ATCAGTATTGCAAGAAAGCT+AGG | + | chr8_3:6586314-6586333 | Msa1272910:CDS | 35.0% | |
| TCAGTATTGCAAGAAAGCTA+GGG | + | chr8_3:6586315-6586334 | Msa1272910:CDS | 35.0% | |
| AAGACATCACTGAGGTAATT+TGG | + | chr8_3:6586360-6586379 | Msa1272910:intron | 35.0% | |
| AATATGAGCCATACTCAACA+AGG | + | chr8_3:6586740-6586759 | Msa1272910:intron | 35.0% | |
| TAGTCATTGCTAAACAACAG+TGG | - | chr8_3:6586824-6586843 | None:intergenic | 35.0% | |
| ! | AATGCCGGTTATACAATTTC+AGG | + | chr8_3:6586870-6586889 | Msa1272910:intron | 35.0% |
| !!! | TTTCTTCATGAGGGTGTTTT+AGG | - | chr8_3:6586945-6586964 | None:intergenic | 35.0% |
| TAAAACACCCTCATGAAGAA+AGG | + | chr8_3:6586944-6586963 | Msa1272910:CDS | 35.0% | |
| AAAGGTCAATGCATGATACT+AGG | + | chr8_3:6587149-6587168 | Msa1272910:three_prime_UTR | 35.0% | |
| CAAGGCACATTACAAAACTT+AGG | - | chr8_3:6587250-6587269 | None:intergenic | 35.0% | |
| !! | CTAAGTTTTGTAATGTGCCT+TGG | + | chr8_3:6587248-6587267 | Msa1272910:three_prime_UTR | 35.0% |
| GAGAGAAGTTGGCAACATTA+TGG | - | chr8_3:6581467-6581486 | None:intergenic | 40.0% | |
| GCTATTAAGTGTGGTGAGAA+GGG | - | chr8_3:6581500-6581519 | None:intergenic | 40.0% | |
| AGCTATTAAGTGTGGTGAGA+AGG | - | chr8_3:6581501-6581520 | None:intergenic | 40.0% | |
| ! | GTGAACTGATTCTGAAGACA+TGG | - | chr8_3:6581677-6581696 | None:intergenic | 40.0% |
| GATGTCAAGATTGAAGGTTG+TGG | + | chr8_3:6581914-6581933 | Msa1272910:CDS | 40.0% | |
| ! | TCTAAAGTGCTTAAGCCAGT+AGG | + | chr8_3:6582404-6582423 | Msa1272910:intron | 40.0% |
| !! | AAGGAAAACTCGGTTTGGAT+TGG | - | chr8_3:6582444-6582463 | None:intergenic | 40.0% |
| CAATGGGAAGATACTTCTTG+AGG | - | chr8_3:6582730-6582749 | None:intergenic | 40.0% | |
| ! | CTCATTGGTTGAAGGATCAA+TGG | - | chr8_3:6582747-6582766 | None:intergenic | 40.0% |
| TGCAATTTCGAAGAGCTCAT+TGG | - | chr8_3:6582762-6582781 | None:intergenic | 40.0% | |
| TTGCAGCAAGCTTATCAATG+TGG | + | chr8_3:6582881-6582900 | Msa1272910:intron | 40.0% | |
| GATTACTCAATCCATGGGAA+AGG | + | chr8_3:6582946-6582965 | Msa1272910:CDS | 40.0% | |
| GGATGTACAGTAGTCAACAT+TGG | + | chr8_3:6583011-6583030 | Msa1272910:CDS | 40.0% | |
| CACAAGACTTCATTGAAGGA+AGG | + | chr8_3:6583036-6583055 | Msa1272910:CDS | 40.0% | |
| ! | ATTCTTGTTTCAGCGTCATC+TGG | + | chr8_3:6583134-6583153 | Msa1272910:intron | 40.0% |
| TCAAGCAATTCAAGAAGCTG+AGG | - | chr8_3:6583358-6583377 | None:intergenic | 40.0% | |
| TCAACTCTTCCATATCCTGT+TGG | - | chr8_3:6583465-6583484 | None:intergenic | 40.0% | |
| ATTAGTTACCTTGACATCGG+AGG | - | chr8_3:6583575-6583594 | None:intergenic | 40.0% | |
| ! | GTCGCTGATTGAATTTCGTA+TGG | + | chr8_3:6583638-6583657 | Msa1272910:intron | 40.0% |
| TCGTATGGTTATGACACTAC+AGG | + | chr8_3:6583653-6583672 | Msa1272910:intron | 40.0% | |
| CTGGTGCAAGAACATTTAGA+AGG | - | chr8_3:6583698-6583717 | None:intergenic | 40.0% | |
| ! | GTGGAAGGATTAGTGTATTC+TGG | - | chr8_3:6583717-6583736 | None:intergenic | 40.0% |
| ATACACTAATCCTTCCACAC+TGG | + | chr8_3:6583719-6583738 | Msa1272910:CDS | 40.0% | |
| !!! | GGGATTTTTTATAGCCAGTG+TGG | - | chr8_3:6583736-6583755 | None:intergenic | 40.0% |
| AAGATTATTCTGACCTGTGC+TGG | - | chr8_3:6583881-6583900 | None:intergenic | 40.0% | |
| ! | TAAAAAGGGTAACGGTGTGT+AGG | - | chr8_3:6584038-6584057 | None:intergenic | 40.0% |
| !! | ATCCGTTAACTTGTCCTATG+TGG | + | chr8_3:6584085-6584104 | Msa1272910:intron | 40.0% |
| GTCCACATAGGACAAGTTAA+CGG | - | chr8_3:6584090-6584109 | None:intergenic | 40.0% | |
| GTTCACAACCATGATTCATG+TGG | + | chr8_3:6584135-6584154 | Msa1272910:intron | 40.0% | |
| CCATTCCTACACGAGAAAAA+TGG | - | chr8_3:6584297-6584316 | None:intergenic | 40.0% | |
| !! | CCATTTTTCTCGTGTAGGAA+TGG | + | chr8_3:6584294-6584313 | Msa1272910:intron | 40.0% |
| ! | GGAGAGAAATCTGTTTTGTC+TGG | - | chr8_3:6584329-6584348 | None:intergenic | 40.0% |
| !! | AAGAAAGAGCATTTCGCCTT+TGG | + | chr8_3:6584385-6584404 | Msa1272910:CDS | 40.0% |
| TTCCGAGGCTATTAATCCAA+AGG | - | chr8_3:6584404-6584423 | None:intergenic | 40.0% | |
| !! | TGGTGTTGATTCTTTGCAGA+TGG | + | chr8_3:6584986-6585005 | Msa1272910:intron | 40.0% |
| !! | TCTTTTGGAGACTCTTGAGA+AGG | + | chr8_3:6585011-6585030 | Msa1272910:CDS | 40.0% |
| ATCTTCCAGTTCACAATTCC+TGG | - | chr8_3:6585042-6585061 | None:intergenic | 40.0% | |
| !! | CTGATGCCGATATTTTGGAA+TGG | + | chr8_3:6585387-6585406 | Msa1272910:CDS | 40.0% |
| CTGCATCAAAACTGACACAA+AGG | + | chr8_3:6585620-6585639 | Msa1272910:intron | 40.0% | |
| ACCTTGCAATGTGTTTAGAC+TGG | + | chr8_3:6585783-6585802 | Msa1272910:intron | 40.0% | |
| ACCAGTCTAAACACATTGCA+AGG | - | chr8_3:6585787-6585806 | None:intergenic | 40.0% | |
| TCCCATTCTCAGGGATTAAA+TGG | + | chr8_3:6585866-6585885 | Msa1272910:intron | 40.0% | |
| ! | TGCAATACTGATGATGTAGC+TGG | - | chr8_3:6586306-6586325 | None:intergenic | 40.0% |
| ATTACCTCAGTGATGTCTTC+AGG | - | chr8_3:6586359-6586378 | None:intergenic | 40.0% | |
| TGAACCAACTGTCCACTTAT+CGG | + | chr8_3:6586715-6586734 | Msa1272910:intron | 40.0% | |
| AAGCCTTTCCTTGTTGAGTA+TGG | - | chr8_3:6586751-6586770 | None:intergenic | 40.0% | |
| ! | TTTTTGCTTTGCGACAATGC+CGG | + | chr8_3:6586855-6586874 | Msa1272910:intron | 40.0% |
| TGATGCTAGCTGTTAGAGTA+AGG | - | chr8_3:6586912-6586931 | None:intergenic | 40.0% | |
| TAACAGCTAGCATCATGTCT+TGG | + | chr8_3:6586917-6586936 | Msa1272910:CDS | 40.0% | |
| GAACTTCAGATAGTGAGAGT+GGG | + | chr8_3:6586977-6586996 | Msa1272910:CDS | 40.0% | |
| GAAGTGAAGGAGAGAGAAGT+TGG | - | chr8_3:6581478-6581497 | None:intergenic | 45.0% | |
| ATGAGTATGAGGAGGGAAAG+TGG | + | chr8_3:6581861-6581880 | Msa1272910:CDS | 45.0% | |
| TGAGTATGAGGAGGGAAAGT+GGG | + | chr8_3:6581862-6581881 | Msa1272910:CDS | 45.0% | |
| GGGAGAAAATCTGAGTGAGA+AGG | + | chr8_3:6581935-6581954 | Msa1272910:CDS | 45.0% | |
| GGAGAGAGCTTCTTATGTTC+AGG | + | chr8_3:6581956-6581975 | Msa1272910:CDS | 45.0% | |
| GTATCAGAACACTGATGAGG+AGG | + | chr8_3:6581983-6582002 | Msa1272910:CDS | 45.0% | |
| ! | AGCTGCCTTTAAGAATGCTG+AGG | - | chr8_3:6582621-6582640 | None:intergenic | 45.0% |
| ! | TCGAAGAGCTCATTGGTTGA+AGG | - | chr8_3:6582755-6582774 | None:intergenic | 45.0% |
| CAAAAGACGGCGTTCTTCTT+TGG | + | chr8_3:6582780-6582799 | Msa1272910:CDS | 45.0% | |
| GCTTATCAATGTGGCAGTTC+CGG | + | chr8_3:6582890-6582909 | Msa1272910:CDS | 45.0% | |
| CTTATCAATGTGGCAGTTCC+GGG | + | chr8_3:6582891-6582910 | Msa1272910:CDS | 45.0% | |
| TTATCAATGTGGCAGTTCCG+GGG | + | chr8_3:6582892-6582911 | Msa1272910:CDS | 45.0% | |
| GGCACACAAGACTTCATTGA+AGG | + | chr8_3:6583032-6583051 | Msa1272910:CDS | 45.0% | |
| TATGACACTACAGGATGCTG+AGG | + | chr8_3:6583662-6583681 | Msa1272910:intron | 45.0% | |
| CCACTATGTCTCTTGCAGTT+AGG | - | chr8_3:6583815-6583834 | None:intergenic | 45.0% | |
| CCTAACTGCAAGAGACATAG+TGG | + | chr8_3:6583812-6583831 | Msa1272910:CDS | 45.0% | |
| ! | ACTGCAAGAGACATAGTGGA+AGG | + | chr8_3:6583816-6583835 | Msa1272910:CDS | 45.0% |
| ! | TCGCACATATTTTCCAGCAC+AGG | + | chr8_3:6583865-6583884 | Msa1272910:CDS | 45.0% |
| TGTCGTCAGGAATTGCTTGA+AGG | - | chr8_3:6584350-6584369 | None:intergenic | 45.0% | |
| CGCCTTTGGATTAATAGCCT+CGG | + | chr8_3:6584399-6584418 | Msa1272910:CDS | 45.0% | |
| TGTCACCAGGAATTGTGAAC+TGG | + | chr8_3:6585034-6585053 | Msa1272910:CDS | 45.0% | |
| TGCTGGAAATGACATTGTGC+AGG | + | chr8_3:6585161-6585180 | Msa1272910:CDS | 45.0% | |
| GCTGGAAATGACATTGTGCA+GGG | + | chr8_3:6585162-6585181 | Msa1272910:CDS | 45.0% | |
| GCACAGAACTAAGAAGCTCA+AGG | - | chr8_3:6585963-6585982 | None:intergenic | 45.0% | |
| TGCAGCCTAGAGCTGTAAAT+TGG | + | chr8_3:6585980-6585999 | Msa1272910:CDS | 45.0% | |
| GCAGCCTAGAGCTGTAAATT+GGG | + | chr8_3:6585981-6586000 | Msa1272910:CDS | 45.0% | |
| CAGCCTAGAGCTGTAAATTG+GGG | + | chr8_3:6585982-6586001 | Msa1272910:CDS | 45.0% | |
| AGTCCCCAATTTACAGCTCT+AGG | - | chr8_3:6585988-6586007 | None:intergenic | 45.0% | |
| GAGCCATACTCAACAAGGAA+AGG | + | chr8_3:6586745-6586764 | Msa1272910:intron | 45.0% | |
| CCACTGTCCTTTCTTCATGA+GGG | - | chr8_3:6586954-6586973 | None:intergenic | 45.0% | |
| CCTCATGAAGAAAGGACAGT+GGG | + | chr8_3:6586952-6586971 | Msa1272910:CDS | 45.0% | |
| GGAACTTCAGATAGTGAGAG+TGG | + | chr8_3:6586976-6586995 | Msa1272910:CDS | 45.0% | |
| TAGTGAGAGTGGGAGTCAAT+TGG | + | chr8_3:6586987-6587006 | Msa1272910:CDS | 45.0% | |
| !!! | AGTATTATATATTTATTTTT+AGG | + | chr8_3:6583919-6583938 | Msa1272910:intron | 5.0% |
| TGTGGTGAGAAGGGAAGTGA+AGG | - | chr8_3:6581491-6581510 | None:intergenic | 50.0% | |
| TAGGCCCTGTTTGGATAGAC+AGG | + | chr8_3:6582262-6582281 | Msa1272910:intron | 50.0% | |
| TTTCAGCGTCATCTGGTGCT+TGG | + | chr8_3:6583141-6583160 | Msa1272910:intron | 50.0% | |
| TTCAGCGTCATCTGGTGCTT+GGG | + | chr8_3:6583142-6583161 | Msa1272910:intron | 50.0% | |
| CTTGACATCGGAGGAGAAGT+TGG | - | chr8_3:6583566-6583585 | None:intergenic | 50.0% | |
| CAACTTCTCCTCCGATGTCA+AGG | + | chr8_3:6583564-6583583 | Msa1272910:CDS | 50.0% | |
| !! | ACTCTTGAGAAGGTGTCACC+AGG | + | chr8_3:6585021-6585040 | Msa1272910:CDS | 50.0% |
| AACTTGCGATTTCACGCTCG+TGG | + | chr8_3:6585353-6585372 | Msa1272910:CDS | 50.0% | |
| ACTTGCGATTTCACGCTCGT+GGG | + | chr8_3:6585354-6585373 | Msa1272910:CDS | 50.0% | |
| CAGTGATGTCTTCAGGAAGC+AGG | - | chr8_3:6586352-6586371 | None:intergenic | 50.0% | |
| GCTTCCTGAAGACATCACTG+AGG | + | chr8_3:6586352-6586371 | Msa1272910:CDS | 50.0% | |
| TTCGCCGATAAGTGGACAGT+TGG | - | chr8_3:6586722-6586741 | None:intergenic | 50.0% | |
| GGCTCATATTCGCCGATAAG+TGG | - | chr8_3:6586730-6586749 | None:intergenic | 50.0% | |
| CCCTCATGAAGAAAGGACAG+TGG | + | chr8_3:6586951-6586970 | Msa1272910:CDS | 50.0% | |
| CCCACTGTCCTTTCTTCATG+AGG | - | chr8_3:6586955-6586974 | None:intergenic | 50.0% | |
| CATGAAGAAAGGACAGTGGG+AGG | + | chr8_3:6586955-6586974 | Msa1272910:CDS | 50.0% | |
| TCAGCGTCATCTGGTGCTTG+GGG | + | chr8_3:6583143-6583162 | Msa1272910:intron | 55.0% | |
| !! | CTAGAGTCTTCGGTGTCGTC+AGG | - | chr8_3:6584363-6584382 | None:intergenic | 55.0% |
| GCACGCTCGTCAATAGTCCC+CGG | - | chr8_3:6582912-6582931 | None:intergenic | 60.0% | |
| GCGATTTCACGCTCGTGGGA+AGG | + | chr8_3:6585358-6585377 | Msa1272910:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 6581422 | 6587295 | 6581422 | ID=Msa1272910;Name=Msa1272910 |
| chr8_3 | mRNA | 6581422 | 6587295 | 6581422 | ID=Msa1272910-mRNA-1;Parent=Msa1272910;Name=Msa1272910-mRNA-1;_AED=0.09;_eAED=0.09;_QI=219|1|1|1|1|1|14|215|666 |
| chr8_3 | exon | 6581422 | 6581727 | 6581422 | ID=Msa1272910-mRNA-1:exon:2413;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6581858 | 6582028 | 6581858 | ID=Msa1272910-mRNA-1:exon:2414;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6582560 | 6582801 | 6582560 | ID=Msa1272910-mRNA-1:exon:2415;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6582887 | 6583058 | 6582887 | ID=Msa1272910-mRNA-1:exon:2416;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6583147 | 6583185 | 6583147 | ID=Msa1272910-mRNA-1:exon:2417;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6583319 | 6583387 | 6583319 | ID=Msa1272910-mRNA-1:exon:2418;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6583469 | 6583585 | 6583469 | ID=Msa1272910-mRNA-1:exon:2419;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6583675 | 6583886 | 6583675 | ID=Msa1272910-mRNA-1:exon:2420;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6584311 | 6584466 | 6584311 | ID=Msa1272910-mRNA-1:exon:2421;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6585005 | 6585204 | 6585005 | ID=Msa1272910-mRNA-1:exon:2422;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6585306 | 6585463 | 6585306 | ID=Msa1272910-mRNA-1:exon:2423;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6585931 | 6586027 | 6585931 | ID=Msa1272910-mRNA-1:exon:2424;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6586282 | 6586373 | 6586282 | ID=Msa1272910-mRNA-1:exon:2425;Parent=Msa1272910-mRNA-1 |
| chr8_3 | exon | 6586892 | 6587295 | 6586892 | ID=Msa1272910-mRNA-1:exon:2426;Parent=Msa1272910-mRNA-1 |
| chr8_3 | five_prime_UTR | 6581422 | 6581640 | 6581422 | ID=Msa1272910-mRNA-1:five_prime_utr;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6581641 | 6581727 | 6581641 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6581858 | 6582028 | 6581858 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6582560 | 6582801 | 6582560 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6582887 | 6583058 | 6582887 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6583147 | 6583185 | 6583147 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6583319 | 6583387 | 6583319 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6583469 | 6583585 | 6583469 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6583675 | 6583886 | 6583675 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6584311 | 6584466 | 6584311 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6585005 | 6585204 | 6585005 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6585306 | 6585463 | 6585306 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6585931 | 6586027 | 6585931 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6586282 | 6586373 | 6586282 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | CDS | 6586892 | 6587080 | 6586892 | ID=Msa1272910-mRNA-1:cds;Parent=Msa1272910-mRNA-1 |
| chr8_3 | three_prime_UTR | 6587081 | 6587295 | 6587081 | ID=Msa1272910-mRNA-1:three_prime_utr;Parent=Msa1272910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
