AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1281520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1281520 MtrunA17_Chr8g0352231 96.064 940 16 4 1 919 1 940 0.0 1850
Msa1281520 MtrunA17_Chr3g0088821 84.093 943 129 5 1 922 1 943 0.0 1596
Msa1281520 MtrunA17_Chr7g0267731 77.840 889 128 6 47 922 19 851 0.0 1353
Msa1281520 MtrunA17_Chr3g0137951 65.287 942 287 7 6 922 25 951 0.0 1212
Msa1281520 MtrunA17_Chr1g0201731 61.875 960 309 15 1 922 23 963 0.0 1177
Msa1281520 MtrunA17_Chr8g0383701 62.159 954 299 15 11 922 29 962 0.0 1155
Msa1281520 MtrunA17_Chr4g0073711 60.994 946 279 16 5 922 21 904 0.0 1125
Msa1281520 MtrunA17_Chr2g0296991 59.115 949 284 12 12 922 28 910 0.0 1109
Msa1281520 MtrunA17_Chr2g0284211 61.310 840 274 12 103 922 35 843 0.0 1021
Msa1281520 MtrunA17_Chr8g0379241 69.871 697 181 6 240 922 174 855 0.0 1020
Msa1281520 MtrunA17_Chr1g0183381 64.624 718 214 4 221 922 78 771 0.0 992
Msa1281520 MtrunA17_Chr3g0078671 63.395 754 252 4 181 919 164 908 0.0 976
Msa1281520 MtrunA17_Chr3g0078671 47.541 61 32 0 1 61 19 79 3.63e-14 77.0
Msa1281520 MtrunA17_Chr8g0364641 57.909 746 245 8 188 919 152 842 0.0 919
Msa1281520 MtrunA17_Chr8g0364641 49.275 69 29 1 11 73 27 95 6.01e-14 76.3
Msa1281520 MtrunA17_Chr5g0410641 48.777 777 279 17 235 922 241 987 0.0 700
Msa1281520 MtrunA17_Chr4g0039801 47.051 780 294 12 232 922 259 1008 0.0 692
Msa1281520 MtrunA17_Chr2g0297351 48.187 772 275 16 241 922 154 890 0.0 673
Msa1281520 MtrunA17_Chr1g0165411 47.674 774 276 14 233 919 235 966 0.0 671
Msa1281520 MtrunA17_Chr1g0165421 48.143 781 276 16 233 919 249 994 0.0 665
Msa1281520 MtrunA17_Chr7g0269741 48.294 762 294 16 242 922 293 1035 0.0 662
Msa1281520 MtrunA17_Chr7g0274751 45.104 674 263 16 225 843 73 694 7.55e-173 523
Msa1281520 MtrunA17_Chr3g0102541 33.945 654 346 15 269 915 29 603 2.11e-114 367
Msa1281520 MtrunA17_Chr3g0102531 33.384 662 354 15 261 915 21 602 8.95e-113 363
Msa1281520 MtrunA17_Chr2g0322361 33.951 648 328 14 291 913 52 624 4.12e-111 359
Msa1281520 MtrunA17_Chr2g0322371 33.488 648 326 16 291 913 47 614 4.59e-108 350
Msa1281520 MtrunA17_Chr4g0025201 32.967 637 325 12 286 902 43 597 2.61e-105 343
Msa1281520 MtrunA17_Chr2g0322351 35.144 626 341 12 291 914 49 611 4.82e-104 340
Msa1281520 MtrunA17_Chr1g0186381 29.522 691 399 15 241 922 5 616 2.05e-91 306
Msa1281520 MtrunA17_Chr3g0077511 28.290 661 390 11 262 922 19 595 4.58e-89 298
Msa1281520 MtrunA17_Chr3g0095791 28.808 663 385 14 261 922 18 594 5.19e-88 295
Msa1281520 MtrunA17_Chr2g0307191 28.296 675 372 13 262 922 19 595 1.59e-84 286
Msa1281520 MtrunA17_Chr2g0298581 27.844 668 384 13 262 922 19 595 6.23e-83 281
Msa1281520 MtrunA17_Chr3g0102551 37.405 393 219 8 261 639 23 402 1.10e-82 282
Msa1281520 MtrunA17_Chr3g0102551 33.333 171 107 3 748 915 442 608 1.84e-21 100
Msa1281520 MtrunA17_Chr2g0322341 44.262 305 157 5 292 596 52 343 4.80e-82 269
Msa1281520 MtrunA17_Chr4g0046401 37.302 378 210 7 262 632 24 381 2.57e-72 253
Msa1281520 MtrunA17_Chr4g0046401 30.196 255 155 4 689 922 365 617 3.43e-26 115
Msa1281520 MtrunA17_Chr3g0126641 41.880 234 81 8 566 768 1 210 6.32e-41 149
Msa1281520 MtrunA17_Chr2g0322331 32.759 232 139 4 684 902 9 236 1.25e-32 130
Msa1281520 MtrunA17_Chr2g0307241 35.625 160 94 3 262 421 19 169 1.69e-27 111
Msa1281520 MtrunA17_Chr7g0267741 66.000 50 17 0 13 62 1 50 2.86e-19 82.8
Msa1281520 MtrunA17_Chr8g0355061 96.970 33 1 0 887 919 1 33 1.10e-17 77.8
Msa1281520 MtrunA17_Chr0c03g0490021 86.111 36 5 0 887 922 1 36 4.85e-14 70.1
Msa1281520 MtrunA17_Chr3g0094861 31.176 170 106 5 7 173 23 184 2.57e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1281520 AT5G05170.1 81.615 941 142 8 2 922 1 930 0.0 1565
Msa1281520 AT4G32410.1 64.831 944 285 11 5 922 23 945 0.0 1211
Msa1281520 AT2G25540.1 62.607 936 305 11 5 922 17 925 0.0 1189
Msa1281520 AT5G17420.1 62.674 935 257 15 11 922 27 892 0.0 1139
Msa1281520 AT5G09870.1 60.358 951 314 14 1 922 19 935 0.0 1124
Msa1281520 AT5G44030.2 58.617 969 299 13 14 922 16 942 0.0 1123
Msa1281520 AT5G64740.1 60.714 952 324 15 1 922 19 950 0.0 1122
Msa1281520 AT5G44030.1 58.953 955 289 12 14 922 16 913 0.0 1118
Msa1281520 AT4G39350.1 60.021 953 328 10 1 922 19 949 0.0 1114
Msa1281520 AT2G21770.1 59.810 948 312 14 16 922 34 953 0.0 1111
Msa1281520 AT4G18780.1 65.786 757 227 9 186 922 105 849 0.0 1021
Msa1281520 AT5G44030.3 70.755 636 144 5 327 922 1 634 0.0 940
Msa1281520 AT3G03050.1 48.105 765 280 17 245 922 277 1011 0.0 684
Msa1281520 AT4G38190.1 47.724 769 268 14 241 922 251 972 0.0 681
Msa1281520 AT1G02730.1 48.196 776 287 15 239 922 295 1047 0.0 672
Msa1281520 AT5G16910.1 47.451 765 282 16 245 922 280 1011 0.0 668
Msa1281520 AT2G33100.2 47.119 781 276 17 241 922 162 904 0.0 665
Msa1281520 AT2G33100.1 47.119 781 276 17 241 922 162 904 0.0 665
Msa1281520 AT1G32180.1 46.369 785 290 16 235 922 96 846 0.0 647
Msa1281520 AT1G32180.2 46.369 785 290 16 235 922 96 846 0.0 647
Msa1281520 AT2G32530.1 32.945 686 368 14 246 916 10 618 1.92e-111 360
Msa1281520 AT4G15320.3 34.599 685 355 20 246 916 10 615 7.42e-111 359
Msa1281520 AT4G15320.5 34.599 685 355 20 246 916 10 615 1.01e-110 358
Msa1281520 AT2G32620.1 35.387 633 340 15 290 917 50 618 3.78e-110 357
Msa1281520 AT4G15320.4 34.006 694 362 20 246 916 10 630 1.58e-107 350
Msa1281520 AT2G32610.1 31.602 693 370 15 246 917 10 619 3.08e-107 349
Msa1281520 AT2G32620.3 36.615 579 300 15 290 863 50 566 3.36e-106 342
Msa1281520 AT2G32540.1 32.716 648 340 13 289 917 49 619 7.52e-106 345
Msa1281520 AT4G15290.1 33.436 649 328 17 290 916 50 616 4.28e-104 341
Msa1281520 AT4G15320.2 33.680 674 318 19 246 863 10 610 1.99e-99 329
Msa1281520 AT2G32620.4 35.060 579 315 13 343 917 1 522 2.59e-99 325
Msa1281520 AT2G32620.2 36.433 527 269 14 290 811 50 515 2.71e-94 308
Msa1281520 AT4G15320.1 31.831 710 326 19 246 863 10 653 1.40e-91 309
Msa1281520 AT1G55850.1 41.299 385 202 8 255 632 26 393 8.03e-87 293
Msa1281520 AT1G55850.1 32.738 168 106 4 751 915 437 600 3.38e-23 106
Msa1281520 AT4G24010.1 38.046 389 215 9 254 634 19 389 1.94e-76 266
Msa1281520 AT4G24010.1 35.088 171 110 1 748 918 438 607 6.07e-27 118
Msa1281520 AT4G23990.1 37.662 385 216 8 254 630 38 406 6.19e-75 261
Msa1281520 AT4G23990.1 34.857 175 113 1 748 922 457 630 9.69e-28 120
Msa1281520 AT4G24000.1 36.856 388 214 9 254 634 16 379 4.05e-72 253
Msa1281520 AT4G24000.1 35.928 167 106 1 748 914 428 593 4.98e-28 121
Msa1281520 AT4G24000.2 43.590 195 94 6 446 634 3 187 2.53e-38 151
Msa1281520 AT4G24000.2 35.714 168 107 1 748 915 236 402 2.22e-28 121
Msa1281520 AT4G23990.2 48.000 150 77 1 482 630 43 192 4.31e-38 150
Msa1281520 AT4G23990.2 35.088 171 110 1 748 918 243 412 8.15e-28 119

Find 270 sgRNAs with CRISPR-Local

Find 511 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTTAAAATTCGTATTAA+TGG 0.125611 8_3:+21138357 Msa1281520:CDS
GCCTCCTTCAGAAGAGTTTC+TGG 0.159532 8_3:-21139855 None:intergenic
CATCAGAGTTTGCGAGAAAA+TGG 0.190245 8_3:+21138081 Msa1281520:CDS
CAGGATTGTTGACGCAAAAT+TGG 0.191651 8_3:+21136725 Msa1281520:CDS
CCTAAGCGGCCAGCATTTAA+AGG 0.235067 8_3:+21140370 Msa1281520:CDS
CTCACCCCAGCTTCCCCTTC+TGG 0.245034 8_3:-21134995 None:intergenic
GAAACCTCCTTATCATAATT+TGG 0.253009 8_3:-21136348 None:intergenic
CTACAGATAGGATGGATTTA+TGG 0.256820 8_3:+21140277 Msa1281520:intron
GTCACAGAAGATATTCTTAC+TGG 0.258985 8_3:+21140304 Msa1281520:CDS
CAGTACCGTTGACCCGTTAA+AGG 0.270603 8_3:+21137932 Msa1281520:CDS
AAGATTTGCGGGGAAAATAT+TGG 0.271638 8_3:+21135219 Msa1281520:CDS
GTTCACAACTGACAGGTTTC+AGG 0.277218 8_3:-21134196 None:intergenic
ACAGGAAGTCCTGCAGTTAT+TGG 0.284141 8_3:+21136183 Msa1281520:CDS
TTAGCAACTTAGCTAGTATA+TGG 0.288332 8_3:+21141270 Msa1281520:CDS
GTTTGCCATATCCTGGATAT+TGG 0.295709 8_3:+21137711 Msa1281520:CDS
GGGTTCAATATTATACTTCT+TGG 0.299004 8_3:-21138114 None:intergenic
GCTCTGAAATCTTCTGCTTT+TGG 0.307620 8_3:-21136275 None:intergenic
GATATTGAAGAAGGAGTAGA+AGG 0.310085 8_3:+21139457 Msa1281520:CDS
TTCAATAGGACGGCTTTATA+CGG 0.310727 8_3:+21139274 Msa1281520:CDS
TTAGTTCACTTATTGATTAC+AGG 0.312437 8_3:+21136165 Msa1281520:intron
CAAGTGCTTCGATGGGCTTT+AGG 0.320242 8_3:+21140427 Msa1281520:CDS
TGCATTACCCACCCTTCTTC+CGG 0.332606 8_3:-21138405 None:intergenic
GGTGGAGAAACGAACAGTTT+TGG 0.335998 8_3:+21141369 Msa1281520:CDS
TGATTAACATCGGACGAATA+TGG 0.346981 8_3:-21136579 None:intergenic
TCTTGAATTCAATTATGATT+TGG 0.348596 8_3:+21136242 Msa1281520:CDS
TTGATCCAATATCCAGGATA+TGG 0.350091 8_3:-21137716 None:intergenic
CATCAAACCTCTGTGGAAAC+TGG 0.350767 8_3:-21138999 None:intergenic
TTTCTTTCAATCTTCGCAAC+TGG 0.356942 8_3:+21141305 Msa1281520:CDS
CCTTTAAATGCTGGCCGCTT+AGG 0.358966 8_3:-21140370 None:intergenic
CAGTTTCCACAGAGGTTTGA+TGG 0.361278 8_3:+21139000 Msa1281520:CDS
ATCATCACTGTGTTGTTCCT+TGG 0.364915 8_3:+21134312 Msa1281520:five_prime_UTR
CACGAGAAACATAGACTAAA+CGG 0.365557 8_3:-21138694 None:intergenic
TCCGCAATGCATATGCATTA+TGG 0.366288 8_3:+21137662 Msa1281520:CDS
GATACTCACAAGTGCATTCA+TGG 0.378195 8_3:-21138756 None:intergenic
ATCAAGCATGCAAGATTTGC+GGG 0.379654 8_3:+21135208 Msa1281520:CDS
CTTCAAATTATACAGAGAAT+AGG 0.380174 8_3:+21134911 Msa1281520:intron
ATGGAGCCAGAAGGGGAAGC+TGG 0.381422 8_3:+21134989 Msa1281520:CDS
AGATTTGCGGGGAAAATATT+GGG 0.381899 8_3:+21135220 Msa1281520:CDS
GTATCTGCTGTCCTTACTAA+TGG 0.381961 8_3:+21138865 Msa1281520:CDS
AGAAAGAAGCTTTGTGAAGA+AGG 0.383413 8_3:-21134244 None:intergenic
TATCAGTTATATGCGAGATT+TGG 0.384160 8_3:+21137689 Msa1281520:CDS
AAGATTTCAGAGCGCATGTT+GGG 0.398508 8_3:+21136285 Msa1281520:CDS
AGTTGACTATCCAGTGGATA+AGG 0.399259 8_3:+21137998 Msa1281520:CDS
TGATGGAATAGAAACCTTCC+TGG 0.401422 8_3:-21137554 None:intergenic
CCCCTCTTTCAGAAGCAGCT+TGG 0.406272 8_3:-21136824 None:intergenic
TGGTCTCTGACGTTATTTCC+AGG 0.406899 8_3:-21138444 None:intergenic
TCATCACTGTGTTGTTCCTT+GGG 0.409085 8_3:+21134313 Msa1281520:five_prime_UTR
TGATCGCCCAATGTTGTCAT+TGG 0.410117 8_3:-21135189 None:intergenic
AGATATGTTTCGCGGTTGAC+AGG 0.418534 8_3:-21137754 None:intergenic
CGGTTGACAGGAAGCCACTT+AGG 0.418757 8_3:-21137742 None:intergenic
GCAAACATGTTTACCGAGGT+TGG 0.421658 8_3:-21138971 None:intergenic
TTCAAATTATACAGAGAATA+GGG 0.422290 8_3:+21134912 Msa1281520:intron
ACGAGAAACATAGACTAAAC+GGG 0.422412 8_3:-21138693 None:intergenic
CATCCAGTACCGACATAAAC+AGG 0.422858 8_3:-21139247 None:intergenic
AAGCTCGGCAGCCTCTTTCC+AGG 0.422861 8_3:+21137536 Msa1281520:CDS
AGATTTGGTTTGCCATATCC+TGG 0.425778 8_3:+21137704 Msa1281520:CDS
AGGATTGTTGACGCAAAATT+GGG 0.426564 8_3:+21136726 Msa1281520:CDS
ACAGATAAATCTGAGAGGTT+TGG 0.428706 8_3:+21139210 Msa1281520:intron
CGGACGAATATGGAAGACTA+TGG 0.429066 8_3:-21136569 None:intergenic
ACGAGTGGAGGCTCCTTTAA+CGG 0.429431 8_3:-21137945 None:intergenic
GACTGAAGATTGGCACAGTT+GGG 0.430890 8_3:-21139429 None:intergenic
AGAGGTTTGATGGTATTGAT+AGG 0.435261 8_3:+21139010 Msa1281520:CDS
TGCGAAGGCAACGAAAGTTC+CGG 0.435736 8_3:+21138386 Msa1281520:CDS
CAACCAACCTGGATCATTCC+CGG 0.436582 8_3:-21138468 None:intergenic
GCAGCTTGGCCTGTGCTCAT+TGG 0.438428 8_3:-21136810 None:intergenic
ACAGAAGATTGATTACTTGA+AGG 0.441414 8_3:+21138160 Msa1281520:CDS
AGAACAATGACCAATCGATA+TGG 0.441429 8_3:-21137589 None:intergenic
AGAGGTTTGGATGGCATTCA+AGG 0.444572 8_3:+21139223 Msa1281520:CDS
GTACTGGATGTGTCTTCAAT+AGG 0.444583 8_3:+21139260 Msa1281520:CDS
CAGTTGACACTCGGGAGATC+AGG 0.444977 8_3:+21136312 Msa1281520:CDS
GATGACATTGAGAGCCTCTC+AGG 0.445005 8_3:-21136519 None:intergenic
AATATTGGGAAGACGGTTGA+TGG 0.450142 8_3:+21135234 Msa1281520:CDS
CACCAGCTTTCTTGTGATGT+TGG 0.453262 8_3:-21138733 None:intergenic
AACTGTGCCAATCTTCAGTC+TGG 0.454232 8_3:+21139432 Msa1281520:CDS
TTTCTCACAATCACATTCCT+AGG 0.456171 8_3:+21136367 Msa1281520:CDS
GCATTATCGGTTAACAAATC+CGG 0.457474 8_3:+21137639 Msa1281520:CDS
TTAGCCGACACTGTCCCATC+TGG 0.458004 8_3:+21140467 Msa1281520:CDS
AAGAATAGAAAGTACGGTAT+TGG 0.460314 8_3:-21137973 None:intergenic
ATAAGAAAGGTCCATTAGTA+AGG 0.462687 8_3:-21138876 None:intergenic
TACGAGTATGAAAGGAAAGA+TGG 0.462765 8_3:+21135309 Msa1281520:CDS
AGATGCACGCCCGTGGTTGG+CGG 0.462818 8_3:+21140332 Msa1281520:CDS
TGTCCCATCTGGTATGGTTA+TGG 0.463519 8_3:+21140478 Msa1281520:CDS
CGAGTGGAGGCTCCTTTAAC+GGG 0.463951 8_3:-21137944 None:intergenic
TGGAGCCAGAAGGGGAAGCT+GGG 0.465368 8_3:+21134990 Msa1281520:CDS
AAACAACAGCAAGGCTTTGA+GGG 0.466023 8_3:+21138924 Msa1281520:CDS
AGAAGGGGAATGGCAGTGAC+TGG 0.468948 8_3:-21140553 None:intergenic
CAAACATGTTTACCGAGGTT+GGG 0.473637 8_3:-21138970 None:intergenic
ATCATCAAATACATCAGATC+TGG 0.473942 8_3:-21136862 None:intergenic
ATCAGAGTTTGCGAGAAAAT+GGG 0.474953 8_3:+21138082 Msa1281520:CDS
CAAGATGGTACACCGTGGCC+TGG 0.474978 8_3:+21138426 Msa1281520:CDS
GGAAAGCCAATGACAACATT+GGG 0.475101 8_3:+21135183 Msa1281520:CDS
ACACTTGTGTTGAATTGAAA+CGG 0.475502 8_3:-21134158 None:intergenic
GGTCCTGTTTATGTCGGTAC+TGG 0.476414 8_3:+21139244 Msa1281520:CDS
TCGTAACAAAGCCGACAAAC+AGG 0.477223 8_3:-21135291 None:intergenic
AGACTGAAGATTGGCACAGT+TGG 0.479704 8_3:-21139430 None:intergenic
TTCCCCTTCTGGCTCCATCA+TGG 0.480761 8_3:-21134984 None:intergenic
TTCTTGTGATGTTGGAAACC+TGG 0.482128 8_3:-21138725 None:intergenic
GCTGCTTCTGAAAGAGGGGC+TGG 0.483591 8_3:+21136828 Msa1281520:CDS
GTTTCTCGTGAAAAGCGTCC+AGG 0.484428 8_3:+21138707 Msa1281520:CDS
AGTTCAAAATCTAGTAAGAA+AGG 0.484482 8_3:+21139373 Msa1281520:CDS
GGGAAAGCCAATGACAACAT+TGG 0.486241 8_3:+21135182 Msa1281520:intron
GTCTAAACCAAGTGCTTCGA+TGG 0.486486 8_3:+21140419 Msa1281520:CDS
CGAAGTACCACTCGGGTGCA+CGG 0.486841 8_3:-21138136 None:intergenic
AAATAACGTCAGAGACCATC+CGG 0.487878 8_3:+21138449 Msa1281520:CDS
TAGACGATCAGAAAGATTGA+TGG 0.487942 8_3:-21140401 None:intergenic
TATGGATTTATCCTAGATGA+TGG 0.489787 8_3:-21137571 None:intergenic
GAAGTACCACTCGGGTGCAC+GGG 0.492005 8_3:-21138135 None:intergenic
ATATTATACTTCTTGGTGAA+AGG 0.492686 8_3:-21138107 None:intergenic
GCCAAGCTGCTTCTGAAAGA+GGG 0.493262 8_3:+21136823 Msa1281520:CDS
TAAACAACAGCAAGGCTTTG+AGG 0.494906 8_3:+21138923 Msa1281520:CDS
AGTAGAGTTCATCACCATGA+TGG 0.496271 8_3:+21134970 Msa1281520:exon
GCAACGAAAGTTCCGGAAGA+AGG 0.496806 8_3:+21138393 Msa1281520:CDS
TCAAGATGCACGCCCGTGGT+TGG 0.497845 8_3:+21140329 Msa1281520:CDS
CAGTGTCAAGTCCTCCACTT+TGG 0.498952 8_3:-21138655 None:intergenic
GTCTATCGAGATATGTTTCG+CGG 0.499533 8_3:-21137762 None:intergenic
AGAAGCTTTGTGAAGAAGGA+AGG 0.500025 8_3:-21134240 None:intergenic
AGGTTTCTATTCCATCATCT+AGG 0.500584 8_3:+21137560 Msa1281520:CDS
GTCATCACCCGTAGCTGGTG+GGG 0.500964 8_3:+21136536 Msa1281520:CDS
TTGGGGTGGCAGTTGACACT+CGG 0.501129 8_3:+21136303 Msa1281520:CDS
GAGGACTATGAGAAAAGATT+CGG 0.501167 8_3:+21139768 Msa1281520:CDS
AGACCATCCGGGAATGATCC+AGG 0.503664 8_3:+21138461 Msa1281520:CDS
TCATCACCCGTAGCTGGTGG+GGG 0.504366 8_3:+21136537 Msa1281520:CDS
GGTTGACAGGAAGCCACTTA+GGG 0.505141 8_3:-21137741 None:intergenic
CTAAAGCCCATCGAAGCACT+TGG 0.507939 8_3:-21140426 None:intergenic
CAAGGATCGTAGAGCAATGA+AGG 0.508673 8_3:+21138205 Msa1281520:CDS
CTGGAATCCTAGAGATGAGA+TGG 0.510388 8_3:+21141324 Msa1281520:CDS
TATTGGATCAATTCCCTAAG+TGG 0.510907 8_3:+21137728 Msa1281520:CDS
ATTGGTCATTGTTCTGCGAC+TGG 0.512176 8_3:+21137597 Msa1281520:CDS
CAATCAAGATTCAATAAGAA+AGG 0.513986 8_3:-21138889 None:intergenic
CTCGGGAGATCAGGAGAGCT+TGG 0.514058 8_3:+21136321 Msa1281520:CDS
CGGGGAAAATATTGGGAAGA+CGG 0.517788 8_3:+21135227 Msa1281520:CDS
AGGGACAAATGTCACTCATC+CGG 0.517877 8_3:-21134220 None:intergenic
CAGAGTGATGACAGCAACCC+AGG 0.518067 8_3:-21139331 None:intergenic
CAAGCATCACATGCAATGAA+TGG 0.520477 8_3:-21135261 None:intergenic
GGAGGCTATGTGCTTTATGA+TGG 0.520591 8_3:+21138945 Msa1281520:CDS
TGTCATCACCCGTAGCTGGT+GGG 0.520797 8_3:+21136535 Msa1281520:CDS
TCAATGTCATCACCCGTAGC+TGG 0.521487 8_3:+21136531 Msa1281520:CDS
TATTGGAGATAGTGAAGAGG+AGG 0.522790 8_3:+21136200 Msa1281520:CDS
GGCCAAGCTGCTTCTGAAAG+AGG 0.523132 8_3:+21136822 Msa1281520:CDS
ACGAGTATGAAAGGAAAGAT+GGG 0.524144 8_3:+21135310 Msa1281520:CDS
ATATCCTCCAGACTGAAGAT+TGG 0.524744 8_3:-21139439 None:intergenic
TGGCACTCCAAATTATGATA+AGG 0.527613 8_3:+21136341 Msa1281520:CDS
GGAGAGAAAGAGTTGACGGC+TGG 0.528013 8_3:+21136760 Msa1281520:CDS
GACTCTACGCTGATGGAGAA+TGG 0.530002 8_3:+21139810 Msa1281520:CDS
ATTCTTGTGCAGCAAATACC+AGG 0.530255 8_3:+21136706 Msa1281520:intron
ATGTCATCACCCGTAGCTGG+TGG 0.533919 8_3:+21136534 Msa1281520:CDS
GGCTTTGTTACGAGTATGAA+AGG 0.535921 8_3:+21135301 Msa1281520:CDS
CGACACTGTCCCATCTGGTA+TGG 0.539049 8_3:+21140472 Msa1281520:CDS
ATAGAAACCTTCCTGGAAAG+AGG 0.539442 8_3:-21137547 None:intergenic
GGTGCAGAACCTTTAAATGC+TGG 0.540880 8_3:-21140379 None:intergenic
GATCAAGCATGCAAGATTTG+CGG 0.543290 8_3:+21135207 Msa1281520:CDS
TCACTATCTCCAATAACTGC+AGG 0.544967 8_3:-21136192 None:intergenic
GCAAGGTACAATACATGAGA+AGG 0.545766 8_3:-21140570 None:intergenic
TCCTGCTATGTCTCTGATGA+CGG 0.546583 8_3:+21138023 Msa1281520:CDS
AAACAAGTTCATCATCCCTC+AGG 0.547156 8_3:+21140612 Msa1281520:CDS
TTCCAACATCACAAGAAAGC+TGG 0.547342 8_3:+21138731 Msa1281520:CDS
TAGGATAAATCCATATCGAT+TGG 0.547695 8_3:+21137579 Msa1281520:CDS
AATGCATATGCATTGCGGAC+CGG 0.549067 8_3:-21137658 None:intergenic
TCCTAGGCTGACAAGTGGAC+AGG 0.550446 8_3:+21136383 Msa1281520:CDS
AACTGAAAGAATAGAAAGTA+CGG 0.553701 8_3:-21137979 None:intergenic
GTGTCTTGTATAGATATGAT+CGG 0.553736 8_3:+21137868 Msa1281520:intron
GAAGACTAAAGTGGCTTGAG+AGG 0.554723 8_3:+21140503 Msa1281520:CDS
TGTCTTGTATAGATATGATC+GGG 0.555398 8_3:+21137869 Msa1281520:intron
TCACCATGATGGAGCCAGAA+GGG 0.555622 8_3:+21134981 Msa1281520:exon
ATCCGGAGTTCACAACTGAC+AGG 0.557010 8_3:-21134203 None:intergenic
CACTCCAAATTATGATAAGG+AGG 0.557459 8_3:+21136344 Msa1281520:CDS
AGGGAATTGATCCAATATCC+AGG 0.557605 8_3:-21137722 None:intergenic
AAAGAAAACAGTATTACGAT+TGG 0.558410 8_3:-21139046 None:intergenic
GGAGATAGTGAAGAGGAGGT+AGG 0.559372 8_3:+21136204 Msa1281520:CDS
CTGACGTTATTTCCAGGCCA+CGG 0.560181 8_3:-21138438 None:intergenic
TAGCAGGAAACCTTATCCAC+TGG 0.560549 8_3:-21138008 None:intergenic
GGAGCCAGAAGGGGAAGCTG+GGG 0.560582 8_3:+21134991 Msa1281520:CDS
GCTATTCATGTTATCAGCTG+TGG 0.560849 8_3:+21139876 Msa1281520:CDS
CTTCTGTGCGAAGTACCACT+CGG 0.561697 8_3:-21138144 None:intergenic
TTGCTGTCATCACTCTGTGG+TGG 0.562110 8_3:+21139337 Msa1281520:CDS
CACCACTCCATCTCATCTCT+AGG 0.562151 8_3:-21141331 None:intergenic
GTATATAGACCGCCAACCAC+GGG 0.563957 8_3:-21140341 None:intergenic
TAGGGAGCTGTTTCTGAAGT+GGG 0.564023 8_3:+21134930 Msa1281520:five_prime_UTR
TTATGTTTCACTTTAAGAGG+AGG 0.565471 8_3:-21139304 None:intergenic
GCATGGAGAGAAAGAGTTGA+CGG 0.566374 8_3:+21136756 Msa1281520:CDS
GAGATGAGATGGAGTGGTGT+TGG 0.567400 8_3:+21141335 Msa1281520:CDS
CCCATCTGGTATGGTTATGG+TGG 0.569176 8_3:+21140481 Msa1281520:CDS
CAAAATTGGGCAATGTAGCA+TGG 0.570144 8_3:+21136739 Msa1281520:CDS
GAAGATTTCAGAGCGCATGT+TGG 0.570992 8_3:+21136284 Msa1281520:CDS
AGTCTGGAGGATATTGAAGA+AGG 0.572692 8_3:+21139448 Msa1281520:CDS
CAACGAAAGTTCCGGAAGAA+GGG 0.573845 8_3:+21138394 Msa1281520:CDS
TCGGCAGCCTCTTTCCAGGA+AGG 0.573890 8_3:+21137540 Msa1281520:CDS
AGACGATCAGAAAGATTGAT+GGG 0.574627 8_3:-21140400 None:intergenic
TCTTTCAGTTGACTATCCAG+TGG 0.577758 8_3:+21137992 Msa1281520:CDS
TTTGTGAGAAGACAGACAGC+TGG 0.581241 8_3:-21140592 None:intergenic
ACAATACATGAGAAGGGGAA+TGG 0.583392 8_3:-21140563 None:intergenic
ATCTCGATAGACTTGCACTA+AGG 0.583516 8_3:+21137773 Msa1281520:CDS
CGAAAGTTCCGGAAGAAGGG+TGG 0.585304 8_3:+21138397 Msa1281520:CDS
ATAGGGAGCTGTTTCTGAAG+TGG 0.587068 8_3:+21134929 Msa1281520:five_prime_UTR
TTTCTGCAGGCTCCCCTGAG+AGG 0.587069 8_3:+21136505 Msa1281520:CDS
TCCTGTCCACTTGTCAGCCT+AGG 0.587860 8_3:-21136384 None:intergenic
GATAGTGAAGAGGAGGTAGG+CGG 0.588048 8_3:+21136207 Msa1281520:CDS
AGTTCAGACATCATTTGTCA+AGG 0.588754 8_3:+21138187 Msa1281520:CDS
ATTCAAGGTCCTGTTTATGT+CGG 0.589251 8_3:+21139238 Msa1281520:CDS
CAAGGTACAATACATGAGAA+GGG 0.592601 8_3:-21140569 None:intergenic
TGGGGTGGCAGTTGACACTC+GGG 0.593228 8_3:+21136304 Msa1281520:CDS
CAATGCATATGCATTATGGT+TGG 0.594469 8_3:+21137666 Msa1281520:CDS
TACTCCAGAAACTCTTCTGA+AGG 0.597459 8_3:+21139851 Msa1281520:CDS
CACATTCCTAGGCTGACAAG+TGG 0.602038 8_3:+21136378 Msa1281520:CDS
TTTCAGAGCGCATGTTGGGG+TGG 0.602719 8_3:+21136289 Msa1281520:CDS
AATGCTGCTCCAATGAGCAC+AGG 0.603888 8_3:+21136801 Msa1281520:CDS
CCAAGCTGCTTCTGAAAGAG+GGG 0.608044 8_3:+21136824 Msa1281520:CDS
AACCTGTCAGTTGTGAACTC+CGG 0.608368 8_3:+21134201 Msa1281520:five_prime_UTR
GAAGGGTGGGTAATGCAAGA+TGG 0.608459 8_3:+21138411 Msa1281520:CDS
GAGAAGACAGACAGCTGGCA+AGG 0.611196 8_3:-21140587 None:intergenic
ATAAATCTGAGAGGTTTGGA+TGG 0.612754 8_3:+21139214 Msa1281520:CDS
AGTAAGAATATCTTCTGTGA+CGG 0.613338 8_3:-21140302 None:intergenic
ACCATAATGCATATGCATTG+CGG 0.613812 8_3:-21137663 None:intergenic
GTTTCTGGAGTAGCATTCTG+AGG 0.615895 8_3:-21139840 None:intergenic
AAGTACCACTCGGGTGCACG+GGG 0.616533 8_3:-21138134 None:intergenic
ATCACCATGATGGAGCCAGA+AGG 0.616583 8_3:+21134980 Msa1281520:exon
AGTTATTGGAGATAGTGAAG+AGG 0.617238 8_3:+21136197 Msa1281520:CDS
GCCGTCATCAGAGACATAGC+AGG 0.618829 8_3:-21138024 None:intergenic
CTATATACTGCATGCCTAAG+CGG 0.619588 8_3:+21140356 Msa1281520:CDS
ATGACATTGAGAGCCTCTCA+GGG 0.620772 8_3:-21136518 None:intergenic
GAAGCTTTGTGAAGAAGGAA+GGG 0.621767 8_3:-21134239 None:intergenic
GTGTTGGAATTGACGAGTGG+TGG 0.622373 8_3:+21141351 Msa1281520:CDS
TCTAAACCAAGTGCTTCGAT+GGG 0.623315 8_3:+21140420 Msa1281520:CDS
ACGGTATTGGCAGTCACGAG+TGG 0.624594 8_3:-21137960 None:intergenic
TATGCAGGAATGATGAAGCT+CGG 0.628129 8_3:+21137521 Msa1281520:intron
CACCATGATGGAGCCAGAAG+GGG 0.628575 8_3:+21134982 Msa1281520:exon
TCCACCATAACCATACCAGA+TGG 0.630645 8_3:-21140482 None:intergenic
TTCTGTGCGAAGTACCACTC+GGG 0.631108 8_3:-21138143 None:intergenic
AGATTTCAGAGCGCATGTTG+GGG 0.633187 8_3:+21136286 Msa1281520:CDS
AGTATATAGACCGCCAACCA+CGG 0.633767 8_3:-21140342 None:intergenic
TGTGCCAATCTTCAGTCTGG+AGG 0.635233 8_3:+21139435 Msa1281520:CDS
TATTAATGGACTTGTTGCGA+AGG 0.636284 8_3:+21138371 Msa1281520:CDS
AGGCTCCTTTAACGGGTCAA+CGG 0.636718 8_3:-21137937 None:intergenic
CGAGAAACATAGACTAAACG+GGG 0.637457 8_3:-21138692 None:intergenic
GAAAGTTCCGGAAGAAGGGT+GGG 0.637739 8_3:+21138398 Msa1281520:CDS
AGGAGAACCTTCTCAACTAG+CGG 0.639011 8_3:+21137893 Msa1281520:CDS
GGATTCAAGATGCACGCCCG+TGG 0.639029 8_3:+21140325 Msa1281520:CDS
TAGGCTGACAAGTGGACAGG+AGG 0.639432 8_3:+21136386 Msa1281520:CDS
GATACGAGATTGATTAACAT+CGG 0.639919 8_3:-21136589 None:intergenic
TTGTATAGATATGATCGGGA+AGG 0.641237 8_3:+21137873 Msa1281520:intron
TCCAGAAACTCTTCTGAAGG+AGG 0.642092 8_3:+21139854 Msa1281520:CDS
CATCACCCGTAGCTGGTGGG+GGG 0.642208 8_3:+21136538 Msa1281520:CDS
CCACCATAACCATACCAGAT+GGG 0.642868 8_3:-21140481 None:intergenic
AGTGGAGGACTTGACACTGA+TGG 0.642928 8_3:+21138659 Msa1281520:CDS
GGGTTGCTGTCATCACTCTG+TGG 0.643519 8_3:+21139334 Msa1281520:CDS
GATAATGCAAGAAAATGCAA+AGG 0.648295 8_3:-21137624 None:intergenic
CTTGAACAGATAAATCTGAG+AGG 0.648912 8_3:+21139205 Msa1281520:intron
TGGATGTGTCTTCAATAGGA+CGG 0.653041 8_3:+21139264 Msa1281520:CDS
AAGGTACAATACATGAGAAG+GGG 0.654133 8_3:-21140568 None:intergenic
GCTATGTCCAGTTTCCACAG+AGG 0.654920 8_3:+21138992 Msa1281520:CDS
TCAATACCATCAAACCTCTG+TGG 0.656019 8_3:-21139006 None:intergenic
CAACCTGGATCATTCCCGGA+TGG 0.656222 8_3:-21138464 None:intergenic
GGCAGTGACTGGATAGATTG+TGG 0.657137 8_3:-21140542 None:intergenic
AATAACGTCAGAGACCATCC+GGG 0.657356 8_3:+21138450 Msa1281520:CDS
CAACAGCAAGGCTTTGAGGG+AGG 0.657640 8_3:+21138927 Msa1281520:CDS
GTATTGGCAGTCACGAGTGG+AGG 0.661187 8_3:-21137957 None:intergenic
GTTATGGTGGAAGACTAAAG+TGG 0.673745 8_3:+21140494 Msa1281520:CDS
TTTATGATGGATCCCAACCT+CGG 0.675191 8_3:+21138958 Msa1281520:CDS
AGCACAACGTATGTCACGAG+AGG 0.678396 8_3:+21139749 Msa1281520:CDS
GTGGTGTTGGAATTGACGAG+TGG 0.683554 8_3:+21141348 Msa1281520:CDS
CATACCAGATGGGACAGTGT+CGG 0.684911 8_3:-21140471 None:intergenic
TCACTACATAAACAACAGCA+AGG 0.690154 8_3:+21138915 Msa1281520:CDS
ATCCTAGAGATGAGATGGAG+TGG 0.693806 8_3:+21141329 Msa1281520:CDS
CATAGCAAACATGTTTACCG+AGG 0.695286 8_3:-21138975 None:intergenic
TCAAGCATGCAAGATTTGCG+GGG 0.699115 8_3:+21135209 Msa1281520:CDS
TTGAACCCCGTGCACCCGAG+TGG 0.700337 8_3:+21138129 Msa1281520:CDS
AGCTTCAAATGTCAACATAG+CGG 0.706066 8_3:-21138048 None:intergenic
TCTACGCTGATGGAGAATGG+TGG 0.722246 8_3:+21139813 Msa1281520:CDS
TGACATTGAGAGCCTCTCAG+GGG 0.755358 8_3:-21136517 None:intergenic
TAATGCAAGATGGTACACCG+TGG 0.810360 8_3:+21138421 Msa1281520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAATACTGAAAAA+TGG + chr8_3:21134542-21134561 Msa1281520:intron 10.0%
!! AAAAAAAAATACTGAAAAAT+GGG + chr8_3:21134543-21134562 Msa1281520:intron 10.0%
!!! AAATTTTAATTGAAAGATTT+TGG - chr8_3:21137476-21137495 None:intergenic 10.0%
!!! AAATACTTGTTAAAAAAATA+TGG - chr8_3:21139531-21139550 None:intergenic 10.0%
!!! TCATTTTCTTAAATTATTAT+TGG + chr8_3:21140029-21140048 Msa1281520:intron 10.0%
!!! ATTTTGAAGAAAATATTTTA+TGG + chr8_3:21140815-21140834 Msa1281520:intron 10.0%
!!! TTTTTTTCTTGTTCTTATAT+TGG + chr8_3:21134877-21134896 Msa1281520:intron 15.0%
!! CATTAAAAAAAAATCACAAA+GGG - chr8_3:21135145-21135164 None:intergenic 15.0%
!! ACATTAAAAAAAAATCACAA+AGG - chr8_3:21135146-21135165 None:intergenic 15.0%
!! TTACAAAGAATTGAATAATA+AGG - chr8_3:21135801-21135820 None:intergenic 15.0%
!! TATTTATTGAACCTAAAAAA+TGG + chr8_3:21137385-21137404 Msa1281520:intron 15.0%
!!! GAATTTAAAATTCGTATTAA+TGG + chr8_3:21138357-21138376 Msa1281520:CDS 15.0%
!! AAATTAGAAATTTACACAAT+TGG - chr8_3:21138550-21138569 None:intergenic 15.0%
!!! AAATACCTAAATCATATTTT+AGG - chr8_3:21139676-21139695 None:intergenic 15.0%
!!! ATTGTTATGTATATTTTTTC+AGG + chr8_3:21139705-21139724 Msa1281520:intron 15.0%
!!! TAAATTAAACTGTTTTCAAA+TGG + chr8_3:21140231-21140250 Msa1281520:intron 15.0%
!!! GAAAAAGGTTGTTTTTTTTA+AGG + chr8_3:21134478-21134497 Msa1281520:intron 20.0%
!! TTCAAATTATACAGAGAATA+GGG + chr8_3:21134912-21134931 Msa1281520:intron 20.0%
!!! AATGTCATTTCTAAATACTT+AGG + chr8_3:21135161-21135180 Msa1281520:intron 20.0%
!!! ATGTCATTTCTAAATACTTA+GGG + chr8_3:21135162-21135181 Msa1281520:intron 20.0%
!! TAATATTTATGATTGATCGA+TGG + chr8_3:21135528-21135547 Msa1281520:intron 20.0%
!! ACAAAGTGTATAAACTTAAA+TGG + chr8_3:21136036-21136055 Msa1281520:intron 20.0%
!! TCTTGAATTCAATTATGATT+TGG + chr8_3:21136242-21136261 Msa1281520:CDS 20.0%
!!! TTTTTGCTTATAATAGTGAT+GGG - chr8_3:21137306-21137325 None:intergenic 20.0%
!! CAATAAATAACTGATGTATT+TGG - chr8_3:21137374-21137393 None:intergenic 20.0%
!!! TAAGCAAAAAACCATTTTTT+AGG - chr8_3:21137399-21137418 None:intergenic 20.0%
!! AAATTGTGATGAAGTTTAAA+AGG - chr8_3:21137804-21137823 None:intergenic 20.0%
!!! TGTAAATTTCTAATTTGTAC+CGG + chr8_3:21138554-21138573 Msa1281520:intron 20.0%
!!! TTTTTATGTTTCACTTTAAG+AGG - chr8_3:21139310-21139329 None:intergenic 20.0%
!! TTGTATCTCATGTTAAAATT+GGG + chr8_3:21139623-21139642 Msa1281520:intron 20.0%
!!! GTTTTCCTAAAATATGATTT+AGG + chr8_3:21139668-21139687 Msa1281520:intron 20.0%
!!! AAATTATATTTTATGTAGCG+CGG + chr8_3:21139950-21139969 Msa1281520:intron 20.0%
!!! GTTTTTTTTATTCATTTGTG+TGG - chr8_3:21140058-21140077 None:intergenic 20.0%
!! AATGAATAAAAAAAACCCAA+AGG + chr8_3:21140062-21140081 Msa1281520:intron 20.0%
!! TTGTTGAATTTATCCTAAAA+TGG + chr8_3:21140739-21140758 Msa1281520:intron 20.0%
!!! TGGTTATGAAAATATTTTCT+TGG - chr8_3:21140844-21140863 None:intergenic 20.0%
!! CAATCACTTCTAAATTATTA+CGG + chr8_3:21140948-21140967 Msa1281520:intron 20.0%
!! AATCACTTCTAAATTATTAC+GGG + chr8_3:21140949-21140968 Msa1281520:intron 20.0%
!!! TTTTACATAAGATAAGAAGA+CGG - chr8_3:21141209-21141228 None:intergenic 20.0%
!!! ATCTGTTTGTTTTGTGAAAA+AGG + chr8_3:21134463-21134482 Msa1281520:intron 25.0%
!!! TCTATTTTTATCTGTGTGTT+TGG + chr8_3:21134566-21134585 Msa1281520:intron 25.0%
!!! TCATTTCTCATTTTTCTTCA+CGG - chr8_3:21134634-21134653 None:intergenic 25.0%
! TGATAATACAAGTGTATGTT+TGG - chr8_3:21134750-21134769 None:intergenic 25.0%
! AGAAACAATAGTCATTGATA+AGG - chr8_3:21134782-21134801 None:intergenic 25.0%
! CTTCAAATTATACAGAGAAT+AGG + chr8_3:21134911-21134930 Msa1281520:intron 25.0%
! GCATAGCATCATAAAATATT+TGG - chr8_3:21135075-21135094 None:intergenic 25.0%
! TTTATGATGCTATGCTATTA+AGG + chr8_3:21135080-21135099 Msa1281520:intron 25.0%
! ATATGACAGATAATGTGTTA+CGG - chr8_3:21135593-21135612 None:intergenic 25.0%
! AGTATGGTTCAATATTAATC+AGG + chr8_3:21135675-21135694 Msa1281520:intron 25.0%
!! TCAGGTGTAAAGATTTTATT+TGG + chr8_3:21135693-21135712 Msa1281520:intron 25.0%
!! ATCAGTACAATGTCTTTTAA+AGG + chr8_3:21135718-21135737 Msa1281520:intron 25.0%
!! TCAGTACAATGTCTTTTAAA+GGG + chr8_3:21135719-21135738 Msa1281520:intron 25.0%
! CTTCAACATGTTTGTTTATA+AGG - chr8_3:21135751-21135770 None:intergenic 25.0%
! CTTATAAACAAACATGTTGA+AGG + chr8_3:21135749-21135768 Msa1281520:intron 25.0%
! TAAATAGCCTTTAAGCTAAA+AGG - chr8_3:21135954-21135973 None:intergenic 25.0%
! TAAGTTTATACACTTTGTCT+TGG - chr8_3:21136034-21136053 None:intergenic 25.0%
!! AAACTTAAATGGAGTGTTAT+TGG + chr8_3:21136047-21136066 Msa1281520:intron 25.0%
! TATTGTTACTAATTACCAGA+TGG + chr8_3:21136093-21136112 Msa1281520:intron 25.0%
! TAAGTGAACTAATTTACCAA+CGG - chr8_3:21136157-21136176 None:intergenic 25.0%
!! TTAGTTCACTTATTGATTAC+AGG + chr8_3:21136165-21136184 Msa1281520:intron 25.0%
! ATAAATGACAGAGATAGTAA+AGG - chr8_3:21136906-21136925 None:intergenic 25.0%
! ATGGACACATAATTTGAAAA+GGG - chr8_3:21136936-21136955 None:intergenic 25.0%
! AATGGACACATAATTTGAAA+AGG - chr8_3:21136937-21136956 None:intergenic 25.0%
! CACATCATCTATATATGAAA+TGG - chr8_3:21136955-21136974 None:intergenic 25.0%
! ATAGTAGATACTGATAACTT+GGG - chr8_3:21136996-21137015 None:intergenic 25.0%
!! ACTATCTAGTAATTTGAAGT+AGG + chr8_3:21137011-21137030 Msa1281520:intron 25.0%
!! CTTTTTGCTTATAATAGTGA+TGG - chr8_3:21137307-21137326 None:intergenic 25.0%
! TTATAAGCAAAAAGTCACTT+AGG + chr8_3:21137313-21137332 Msa1281520:intron 25.0%
!! TTTGCATTTTCTTGCATTAT+CGG + chr8_3:21137626-21137645 Msa1281520:CDS 25.0%
! AACTGAAAGAATAGAAAGTA+CGG - chr8_3:21137982-21138001 None:intergenic 25.0%
! ATATTATACTTCTTGGTGAA+AGG - chr8_3:21138110-21138129 None:intergenic 25.0%
!! TATTCTCTCTGAAAAGTAAA+CGG - chr8_3:21138333-21138352 None:intergenic 25.0%
! ATGTAACATTAGTAAATGAC+AGG - chr8_3:21138608-21138627 None:intergenic 25.0%
!! TTTTCATTCAATAGACAACA+TGG + chr8_3:21138780-21138799 Msa1281520:intron 25.0%
! CAATCAAGATTCAATAAGAA+AGG - chr8_3:21138892-21138911 None:intergenic 25.0%
! AAAGAAAACAGTATTACGAT+TGG - chr8_3:21139049-21139068 None:intergenic 25.0%
! AGTTCAAAATCTAGTAAGAA+AGG + chr8_3:21139373-21139392 Msa1281520:CDS 25.0%
! GAAAATGACAACGTTAAATA+TGG - chr8_3:21139557-21139576 None:intergenic 25.0%
! GTTGTATCTCATGTTAAAAT+TGG + chr8_3:21139622-21139641 Msa1281520:intron 25.0%
!!! ATGTATATTTTTTCAGGTTC+TGG + chr8_3:21139711-21139730 Msa1281520:intron 25.0%
! TTATGAGGATAAATCAGAAT+GGG + chr8_3:21139899-21139918 Msa1281520:intron 25.0%
! GAAAAAAAAAACAAACCTGA+GGG - chr8_3:21140630-21140649 None:intergenic 25.0%
! AGAAAAAAAAAACAAACCTG+AGG - chr8_3:21140631-21140650 None:intergenic 25.0%
!! ACTTAATGCATTTCCATTTT+AGG - chr8_3:21140755-21140774 None:intergenic 25.0%
! AAAATGGAAATGCATTAAGT+AGG + chr8_3:21140755-21140774 Msa1281520:intron 25.0%
!! GAACTGAAACTATCTTTTTA+TGG + chr8_3:21140876-21140895 Msa1281520:intron 25.0%
! CGTAATAATTTAGAAGTGAT+TGG - chr8_3:21140950-21140969 None:intergenic 25.0%
! TCTGCAAGCAAAATAAAATT+AGG - chr8_3:21141250-21141269 None:intergenic 25.0%
ACACTTGTGTTGAATTGAAA+CGG - chr8_3:21134161-21134180 None:intergenic 30.0%
TTTCTCTATCTATTTCCTTC+TGG + chr8_3:21134358-21134377 Msa1281520:intron 30.0%
TTCTCTATCTATTTCCTTCT+GGG + chr8_3:21134359-21134378 Msa1281520:intron 30.0%
!!! TTTGCACGTGCAATTTTTTT+TGG + chr8_3:21134511-21134530 Msa1281520:intron 30.0%
TTTCTGTACGTTTGATATCA+CGG + chr8_3:21134660-21134679 Msa1281520:intron 30.0%
!! TGATATACACCTTAGTTTGT+CGG + chr8_3:21135413-21135432 Msa1281520:intron 30.0%
!! CAGTACAATGTCTTTTAAAG+GGG + chr8_3:21135720-21135739 Msa1281520:intron 30.0%
!!! AGCATATCCTTTTAGCTTAA+AGG + chr8_3:21135944-21135963 Msa1281520:intron 30.0%
! TAAATGGAGTGTTATTGGTT+AGG + chr8_3:21136052-21136071 Msa1281520:intron 30.0%
!!! AAATCTTCTGCTTTTGGTTT+TGG - chr8_3:21136272-21136291 None:intergenic 30.0%
GAAACCTCCTTATCATAATT+TGG - chr8_3:21136351-21136370 None:intergenic 30.0%
CATTCAATTAGTTCCCTAAA+TGG + chr8_3:21136410-21136429 Msa1281520:intron 30.0%
! TTTGGCATGTTTTCAATTTC+AGG + chr8_3:21136470-21136489 Msa1281520:intron 30.0%
GATACGAGATTGATTAACAT+CGG - chr8_3:21136592-21136611 None:intergenic 30.0%
AAAATGAGCATAGTAAGAAG+GGG - chr8_3:21136621-21136640 None:intergenic 30.0%
GAAAATGAGCATAGTAAGAA+GGG - chr8_3:21136622-21136641 None:intergenic 30.0%
TGAAAATGAGCATAGTAAGA+AGG - chr8_3:21136623-21136642 None:intergenic 30.0%
ATCATCAAATACATCAGATC+TGG - chr8_3:21136865-21136884 None:intergenic 30.0%
TGGACACATAATTTGAAAAG+GGG - chr8_3:21136935-21136954 None:intergenic 30.0%
GATAGTAGATACTGATAACT+TGG - chr8_3:21136997-21137016 None:intergenic 30.0%
! TTTTTCGCTAGAAACTATGA+TGG + chr8_3:21137094-21137113 Msa1281520:intron 30.0%
TATGGATTTATCCTAGATGA+TGG - chr8_3:21137574-21137593 None:intergenic 30.0%
TAGGATAAATCCATATCGAT+TGG + chr8_3:21137579-21137598 Msa1281520:CDS 30.0%
GATAATGCAAGAAAATGCAA+AGG - chr8_3:21137627-21137646 None:intergenic 30.0%
TATCAGTTATATGCGAGATT+TGG + chr8_3:21137689-21137708 Msa1281520:CDS 30.0%
GTGTCTTGTATAGATATGAT+CGG + chr8_3:21137868-21137887 Msa1281520:intron 30.0%
TGTCTTGTATAGATATGATC+GGG + chr8_3:21137869-21137888 Msa1281520:intron 30.0%
! AAGAATAGAAAGTACGGTAT+TGG - chr8_3:21137976-21137995 None:intergenic 30.0%
GGGTTCAATATTATACTTCT+TGG - chr8_3:21138117-21138136 None:intergenic 30.0%
ACAGAAGATTGATTACTTGA+AGG + chr8_3:21138160-21138179 Msa1281520:CDS 30.0%
GTACAAATATATTATTCCGC+TGG + chr8_3:21138240-21138259 Msa1281520:intron 30.0%
! ATTCTCTCTGAAAAGTAAAC+GGG - chr8_3:21138332-21138351 None:intergenic 30.0%
TTACATTTGATATCTTCTGC+AGG + chr8_3:21138622-21138641 Msa1281520:intron 30.0%
TCAATAGACAACATGGAATT+CGG + chr8_3:21138787-21138806 Msa1281520:intron 30.0%
ATAAGAAAGGTCCATTAGTA+AGG - chr8_3:21138879-21138898 None:intergenic 30.0%
TGAAAACAAGTTCTCAGAAA+GGG - chr8_3:21139170-21139189 None:intergenic 30.0%
ATGAAAACAAGTTCTCAGAA+AGG - chr8_3:21139171-21139190 None:intergenic 30.0%
! TTATGTTTCACTTTAAGAGG+AGG - chr8_3:21139307-21139326 None:intergenic 30.0%
AAAGTGAAACATAAAAAGCC+TGG + chr8_3:21139313-21139332 Msa1281520:CDS 30.0%
AAGTGAAACATAAAAAGCCT+GGG + chr8_3:21139314-21139333 Msa1281520:CDS 30.0%
GGCAAAAATAGTTTGAACTA+TGG - chr8_3:21139510-21139529 None:intergenic 30.0%
AGTCAACAAAAACAGATGAT+TGG - chr8_3:21139794-21139813 None:intergenic 30.0%
GTTATGAGGATAAATCAGAA+TGG + chr8_3:21139898-21139917 Msa1281520:intron 30.0%
TATGAGGATAAATCAGAATG+GGG + chr8_3:21139900-21139919 Msa1281520:intron 30.0%
TTCAGATCAAAAGTTTGTCT+GGG + chr8_3:21139976-21139995 Msa1281520:intron 30.0%
GAATAAAAAAAACCCAAAGG+AGG + chr8_3:21140065-21140084 Msa1281520:intron 30.0%
!! CAGTTGATAGTATTAGAATG+TGG - chr8_3:21140165-21140184 None:intergenic 30.0%
! TTGTTTTCTGTTCTACAGAT+AGG + chr8_3:21140265-21140284 Msa1281520:intron 30.0%
AGTAAGAATATCTTCTGTGA+CGG - chr8_3:21140305-21140324 None:intergenic 30.0%
TTAATCACTTGTTTAGTTGC+TGG - chr8_3:21140667-21140686 None:intergenic 30.0%
AGCAACTAAACAAGTGATTA+AGG + chr8_3:21140666-21140685 Msa1281520:intron 30.0%
TAAGGACAATCAATCAGATA+TGG + chr8_3:21140684-21140703 Msa1281520:intron 30.0%
TTAGCAACTTAGCTAGTATA+TGG + chr8_3:21141270-21141289 Msa1281520:CDS 30.0%
! AGAAAGAAGCTTTGTGAAGA+AGG - chr8_3:21134247-21134266 None:intergenic 35.0%
AAAACAAAGTAACTCACCCA+AGG - chr8_3:21134332-21134351 None:intergenic 35.0%
TCATTACTCAAAAACCCATC+TGG + chr8_3:21134420-21134439 Msa1281520:intron 35.0%
CATTACTCAAAAACCCATCT+GGG + chr8_3:21134421-21134440 Msa1281520:intron 35.0%
GAATCTGAAAAAACCCAGAT+GGG - chr8_3:21134437-21134456 None:intergenic 35.0%
AGAATCTGAAAAAACCCAGA+TGG - chr8_3:21134438-21134457 None:intergenic 35.0%
TTCTATGAGCCATCATGATT+CGG + chr8_3:21134605-21134624 Msa1281520:intron 35.0%
AAGCTGCATTCTAAATACAG+TGG + chr8_3:21134723-21134742 Msa1281520:intron 35.0%
AAGATTTGCGGGGAAAATAT+TGG + chr8_3:21135219-21135238 Msa1281520:CDS 35.0%
AGATTTGCGGGGAAAATATT+GGG + chr8_3:21135220-21135239 Msa1281520:CDS 35.0%
TACGAGTATGAAAGGAAAGA+TGG + chr8_3:21135309-21135328 Msa1281520:CDS 35.0%
ACGAGTATGAAAGGAAAGAT+GGG + chr8_3:21135310-21135329 Msa1281520:CDS 35.0%
TACCTTTATGCCTCTTGTAT+CGG - chr8_3:21135362-21135381 None:intergenic 35.0%
! CTTTTTACACCGACAAACTA+AGG - chr8_3:21135425-21135444 None:intergenic 35.0%
CTTACCATTCCTCGTTTATA+CGG + chr8_3:21135628-21135647 Msa1281520:intron 35.0%
TTACCATTCCTCGTTTATAC+GGG + chr8_3:21135629-21135648 Msa1281520:intron 35.0%
! CATACTTTGCCATAGTCTTT+TGG - chr8_3:21135661-21135680 None:intergenic 35.0%
CAAAAGACTATGGCAAAGTA+TGG + chr8_3:21135659-21135678 Msa1281520:intron 35.0%
TGAAAAACATGACCTTTGCT+TGG + chr8_3:21135882-21135901 Msa1281520:intron 35.0%
ACTAATTTCCAGTGAAGAAG+AGG + chr8_3:21135917-21135936 Msa1281520:intron 35.0%
AGATAGAATATCCTCTTCAG+TGG - chr8_3:21135986-21136005 None:intergenic 35.0%
GACATCTTCTATAAACCATC+TGG - chr8_3:21136111-21136130 None:intergenic 35.0%
AGTTATTGGAGATAGTGAAG+AGG + chr8_3:21136197-21136216 Msa1281520:CDS 35.0%
TGGCACTCCAAATTATGATA+AGG + chr8_3:21136341-21136360 Msa1281520:CDS 35.0%
CACTCCAAATTATGATAAGG+AGG + chr8_3:21136344-21136363 Msa1281520:CDS 35.0%
TTTCTCACAATCACATTCCT+AGG + chr8_3:21136367-21136386 Msa1281520:CDS 35.0%
ACATGCCAAATTTCATTCAG+AGG - chr8_3:21136460-21136479 None:intergenic 35.0%
!! TGTTTTCAATTTCAGGTGTC+TGG + chr8_3:21136477-21136496 Msa1281520:intron 35.0%
TGATTAACATCGGACGAATA+TGG - chr8_3:21136582-21136601 None:intergenic 35.0%
TGATTGTGATTCGAGATGTT+TGG + chr8_3:21136679-21136698 Msa1281520:intron 35.0%
AGGATTGTTGACGCAAAATT+GGG + chr8_3:21136726-21136745 Msa1281520:CDS 35.0%
TGAAGTAGGACTTGTATCTA+AGG + chr8_3:21137025-21137044 Msa1281520:intron 35.0%
CCTAAATCTAAGCACTCTTT+CGG - chr8_3:21137061-21137080 None:intergenic 35.0%
TATTCATGACTCATTCCAAG+AGG + chr8_3:21137251-21137270 Msa1281520:intron 35.0%
ATTCATGACTCATTCCAAGA+GGG + chr8_3:21137252-21137271 Msa1281520:intron 35.0%
! TGCTTATAATAGTGATGGGA+CGG - chr8_3:21137302-21137321 None:intergenic 35.0%
AGTTTCTACAAGACTACATC+TGG - chr8_3:21137431-21137450 None:intergenic 35.0%
!! CTCAGTTTTCTTTGTTATGC+AGG + chr8_3:21137506-21137525 Msa1281520:intron 35.0%
AGGTTTCTATTCCATCATCT+AGG + chr8_3:21137560-21137579 Msa1281520:CDS 35.0%
AGAACAATGACCAATCGATA+TGG - chr8_3:21137592-21137611 None:intergenic 35.0%
! GCATTATCGGTTAACAAATC+CGG + chr8_3:21137639-21137658 Msa1281520:CDS 35.0%
ACCATAATGCATATGCATTG+CGG - chr8_3:21137666-21137685 None:intergenic 35.0%
CAATGCATATGCATTATGGT+TGG + chr8_3:21137666-21137685 Msa1281520:CDS 35.0%
TTGATCCAATATCCAGGATA+TGG - chr8_3:21137719-21137738 None:intergenic 35.0%
TATTGGATCAATTCCCTAAG+TGG + chr8_3:21137728-21137747 Msa1281520:CDS 35.0%
TTGTATAGATATGATCGGGA+AGG + chr8_3:21137873-21137892 Msa1281520:intron 35.0%
AGCTTCAAATGTCAACATAG+CGG - chr8_3:21138051-21138070 None:intergenic 35.0%
ATCAGAGTTTGCGAGAAAAT+GGG + chr8_3:21138082-21138101 Msa1281520:CDS 35.0%
AGTTCAGACATCATTTGTCA+AGG + chr8_3:21138187-21138206 Msa1281520:CDS 35.0%
! TATGCTACTTGCACAAGTAT+TGG + chr8_3:21138276-21138295 Msa1281520:intron 35.0%
!! TATTAATGGACTTGTTGCGA+AGG + chr8_3:21138371-21138390 Msa1281520:CDS 35.0%
ATATGTTACCCTTGACCTTT+CGG + chr8_3:21138523-21138542 Msa1281520:intron 35.0%
ATTTACACAATTGGTCCGAA+AGG - chr8_3:21138541-21138560 None:intergenic 35.0%
! TATCTTCTGCAGGTTTTCTT+AGG + chr8_3:21138632-21138651 Msa1281520:intron 35.0%
ACGAGAAACATAGACTAAAC+GGG - chr8_3:21138696-21138715 None:intergenic 35.0%
CACGAGAAACATAGACTAAA+CGG - chr8_3:21138697-21138716 None:intergenic 35.0%
! GTGGTTAATCTAATTTGTGC+AGG + chr8_3:21138837-21138856 Msa1281520:intron 35.0%
TCACTACATAAACAACAGCA+AGG + chr8_3:21138915-21138934 Msa1281520:CDS 35.0%
!! AGAGGTTTGATGGTATTGAT+AGG + chr8_3:21139010-21139029 Msa1281520:CDS 35.0%
AAAACAAGTTCTCAGAAAGG+GGG - chr8_3:21139168-21139187 None:intergenic 35.0%
GAAAACAAGTTCTCAGAAAG+GGG - chr8_3:21139169-21139188 None:intergenic 35.0%
CTTGAACAGATAAATCTGAG+AGG + chr8_3:21139205-21139224 Msa1281520:intron 35.0%
ACAGATAAATCTGAGAGGTT+TGG + chr8_3:21139210-21139229 Msa1281520:intron 35.0%
ATAAATCTGAGAGGTTTGGA+TGG + chr8_3:21139214-21139233 Msa1281520:CDS 35.0%
ATTCAAGGTCCTGTTTATGT+CGG + chr8_3:21139238-21139257 Msa1281520:CDS 35.0%
! TTCAATAGGACGGCTTTATA+CGG + chr8_3:21139274-21139293 Msa1281520:CDS 35.0%
GATATTGAAGAAGGAGTAGA+AGG + chr8_3:21139457-21139476 Msa1281520:CDS 35.0%
AACTATTATGCAACGAATGC+AGG - chr8_3:21139487-21139506 None:intergenic 35.0%
GAGGACTATGAGAAAAGATT+CGG + chr8_3:21139768-21139787 Msa1281520:CDS 35.0%
CTTCAGATCAAAAGTTTGTC+TGG + chr8_3:21139975-21139994 Msa1281520:intron 35.0%
TCAGATCAAAAGTTTGTCTG+GGG + chr8_3:21139977-21139996 Msa1281520:intron 35.0%
ATGAAGCAATGTCAAAGACA+TGG - chr8_3:21140110-21140129 None:intergenic 35.0%
TTTCTGTTCTACAGATAGGA+TGG + chr8_3:21140269-21140288 Msa1281520:intron 35.0%
! CTACAGATAGGATGGATTTA+TGG + chr8_3:21140277-21140296 Msa1281520:intron 35.0%
GTCACAGAAGATATTCTTAC+TGG + chr8_3:21140304-21140323 Msa1281520:CDS 35.0%
AGACGATCAGAAAGATTGAT+GGG - chr8_3:21140403-21140422 None:intergenic 35.0%
TAGACGATCAGAAAGATTGA+TGG - chr8_3:21140404-21140423 None:intergenic 35.0%
AAGGTACAATACATGAGAAG+GGG - chr8_3:21140571-21140590 None:intergenic 35.0%
CAAGGTACAATACATGAGAA+GGG - chr8_3:21140572-21140591 None:intergenic 35.0%
TTCAGTTCACAAAGTCATGT+TGG - chr8_3:21140864-21140883 None:intergenic 35.0%
AGATCAGACTGCTCATATTT+CGG - chr8_3:21141133-21141152 None:intergenic 35.0%
TCTGATCTTATTCCAATGGT+CGG + chr8_3:21141145-21141164 Msa1281520:intron 35.0%
TTTCTTTCAATCTTCGCAAC+TGG + chr8_3:21141305-21141324 Msa1281520:CDS 35.0%
!!! AACGAACAGTTTTGGGTTAT+CGG + chr8_3:21141377-21141396 Msa1281520:CDS 35.0%
! TTTTAGTAGACCTTGGAACA+CGG - chr8_3:21141426-21141445 None:intergenic 35.0%
! CAAGTACTTTTAGTAGACCT+TGG - chr8_3:21141433-21141452 None:intergenic 35.0%
!! TCTTCTAGTTTGAGAGTATC+AGG + chr8_3:21141582-21141601 Msa1281520:intron 35.0%
! GAAGCTTTGTGAAGAAGGAA+GGG - chr8_3:21134242-21134261 None:intergenic 40.0%
! AGAAGCTTTGTGAAGAAGGA+AGG - chr8_3:21134243-21134262 None:intergenic 40.0%
! ATCATCACTGTGTTGTTCCT+TGG + chr8_3:21134312-21134331 Msa1281520:five_prime_UTR 40.0%
! TCATCACTGTGTTGTTCCTT+GGG + chr8_3:21134313-21134332 Msa1281520:five_prime_UTR 40.0%
TCTATCTATTTCCTTCTGGG+AGG + chr8_3:21134362-21134381 Msa1281520:intron 40.0%
TAAACTTTACACCTCCCAGA+AGG - chr8_3:21134376-21134395 None:intergenic 40.0%
!!! GCACGTGCAATTTTTTTTGG+TGG + chr8_3:21134514-21134533 Msa1281520:intron 40.0%
ACGGTGAATAAGTCAGAATC+AGG + chr8_3:21134679-21134698 Msa1281520:intron 40.0%
AGTAGAGTTCATCACCATGA+TGG + chr8_3:21134970-21134989 Msa1281520:exon 40.0%
GGAAAGCCAATGACAACATT+GGG + chr8_3:21135183-21135202 Msa1281520:CDS 40.0%
GATCAAGCATGCAAGATTTG+CGG + chr8_3:21135207-21135226 Msa1281520:CDS 40.0%
ATCAAGCATGCAAGATTTGC+GGG + chr8_3:21135208-21135227 Msa1281520:CDS 40.0%
AATATTGGGAAGACGGTTGA+TGG + chr8_3:21135234-21135253 Msa1281520:CDS 40.0%
CAAGCATCACATGCAATGAA+TGG - chr8_3:21135264-21135283 None:intergenic 40.0%
! CTTGTGCTTTTCCTGTTTGT+CGG + chr8_3:21135280-21135299 Msa1281520:CDS 40.0%
!! GGCTTTGTTACGAGTATGAA+AGG + chr8_3:21135301-21135320 Msa1281520:CDS 40.0%
AGTGTAAAACCCGATACAAG+AGG + chr8_3:21135349-21135368 Msa1281520:intron 40.0%
ACCTTTATGCCTCTTGTATC+GGG - chr8_3:21135361-21135380 None:intergenic 40.0%
TACCATTCCTCGTTTATACG+GGG + chr8_3:21135630-21135649 Msa1281520:intron 40.0%
ATGAAGTAGTTATGCGAACG+AGG + chr8_3:21135772-21135791 Msa1281520:intron 40.0%
TACTCAATGAACCACTGAAG+AGG + chr8_3:21135972-21135991 Msa1281520:intron 40.0%
TACTCGTGTGATATTTCCGT+TGG + chr8_3:21136138-21136157 Msa1281520:intron 40.0%
TCACTATCTCCAATAACTGC+AGG - chr8_3:21136195-21136214 None:intergenic 40.0%
TATTGGAGATAGTGAAGAGG+AGG + chr8_3:21136200-21136219 Msa1281520:CDS 40.0%
!!! GCTCTGAAATCTTCTGCTTT+TGG - chr8_3:21136278-21136297 None:intergenic 40.0%
AAGATTTCAGAGCGCATGTT+GGG + chr8_3:21136285-21136304 Msa1281520:CDS 40.0%
! AGGAGAAAGACTGCCATTTA+GGG - chr8_3:21136426-21136445 None:intergenic 40.0%
! AAGGAGAAAGACTGCCATTT+AGG - chr8_3:21136427-21136446 None:intergenic 40.0%
CAGTCTTTCTCCTTCAACTA+CGG + chr8_3:21136433-21136452 Msa1281520:intron 40.0%
AGTCTTTCTCCTTCAACTAC+GGG + chr8_3:21136434-21136453 Msa1281520:intron 40.0%
ATTCTTGTGCAGCAAATACC+AGG + chr8_3:21136706-21136725 Msa1281520:intron 40.0%
! CAATTTTGCGTCAACAATCC+TGG - chr8_3:21136727-21136746 None:intergenic 40.0%
CAGGATTGTTGACGCAAAAT+TGG + chr8_3:21136725-21136744 Msa1281520:CDS 40.0%
CAAAATTGGGCAATGTAGCA+TGG + chr8_3:21136739-21136758 Msa1281520:CDS 40.0%
! ATTGGAGCAGCATTCTTTTC+TGG - chr8_3:21136795-21136814 None:intergenic 40.0%
!! CCGAAAGAGTGCTTAGATTT+AGG + chr8_3:21137058-21137077 Msa1281520:intron 40.0%
! AGTGCTTAGATTTAGGACAG+AGG + chr8_3:21137065-21137084 Msa1281520:intron 40.0%
GTCACACATGCTGTTGAAAT+AGG - chr8_3:21137173-21137192 None:intergenic 40.0%
! TGTTGATTACCAAACCCTCT+TGG - chr8_3:21137269-21137288 None:intergenic 40.0%
CAGTGAAGAACTGATGTATC+TGG + chr8_3:21137338-21137357 Msa1281520:intron 40.0%
TATGCAGGAATGATGAAGCT+CGG + chr8_3:21137521-21137540 Msa1281520:intron 40.0%
ATAGAAACCTTCCTGGAAAG+AGG - chr8_3:21137550-21137569 None:intergenic 40.0%
TGATGGAATAGAAACCTTCC+TGG - chr8_3:21137557-21137576 None:intergenic 40.0%
TCCGCAATGCATATGCATTA+TGG + chr8_3:21137662-21137681 Msa1281520:CDS 40.0%
!! AGATTTGGTTTGCCATATCC+TGG + chr8_3:21137704-21137723 Msa1281520:CDS 40.0%
GTTTGCCATATCCTGGATAT+TGG + chr8_3:21137711-21137730 Msa1281520:CDS 40.0%
AGGGAATTGATCCAATATCC+AGG - chr8_3:21137725-21137744 None:intergenic 40.0%
GTCTATCGAGATATGTTTCG+CGG - chr8_3:21137765-21137784 None:intergenic 40.0%
ATCTCGATAGACTTGCACTA+AGG + chr8_3:21137773-21137792 Msa1281520:CDS 40.0%
TCTTTCAGTTGACTATCCAG+TGG + chr8_3:21137992-21138011 Msa1281520:CDS 40.0%
AGTTGACTATCCAGTGGATA+AGG + chr8_3:21137998-21138017 Msa1281520:CDS 40.0%
CATCAGAGTTTGCGAGAAAA+TGG + chr8_3:21138081-21138100 Msa1281520:CDS 40.0%
AAATAACGTCAGAGACCATC+CGG + chr8_3:21138449-21138468 Msa1281520:CDS 40.0%
TCAAAAGAACTCAACCAACC+TGG - chr8_3:21138482-21138501 None:intergenic 40.0%
CTGTTTACTCATACGCAATC+CGG - chr8_3:21138576-21138595 None:intergenic 40.0%
CGAGAAACATAGACTAAACG+GGG - chr8_3:21138695-21138714 None:intergenic 40.0%
TTCTTGTGATGTTGGAAACC+TGG - chr8_3:21138728-21138747 None:intergenic 40.0%
TTCCAACATCACAAGAAAGC+TGG + chr8_3:21138731-21138750 Msa1281520:CDS 40.0%
GATACTCACAAGTGCATTCA+TGG - chr8_3:21138759-21138778 None:intergenic 40.0%
ACAACATGGAATTCGGTATC+TGG + chr8_3:21138794-21138813 Msa1281520:intron 40.0%
TCTGGACATAGTTATCTCAC+TGG + chr8_3:21138812-21138831 Msa1281520:intron 40.0%
! CATAGTTATCTCACTGGTTG+TGG + chr8_3:21138818-21138837 Msa1281520:intron 40.0%
GTATCTGCTGTCCTTACTAA+TGG + chr8_3:21138865-21138884 Msa1281520:CDS 40.0%
TAAACAACAGCAAGGCTTTG+AGG + chr8_3:21138923-21138942 Msa1281520:CDS 40.0%
! AAACAACAGCAAGGCTTTGA+GGG + chr8_3:21138924-21138943 Msa1281520:CDS 40.0%
!! TTTATGATGGATCCCAACCT+CGG + chr8_3:21138958-21138977 Msa1281520:CDS 40.0%
CAAACATGTTTACCGAGGTT+GGG - chr8_3:21138973-21138992 None:intergenic 40.0%
CATAGCAAACATGTTTACCG+AGG - chr8_3:21138978-21138997 None:intergenic 40.0%
TCAATACCATCAAACCTCTG+TGG - chr8_3:21139009-21139028 None:intergenic 40.0%
CTCAGAAAGGGGGAAAAAAA+TGG - chr8_3:21139158-21139177 None:intergenic 40.0%
GTACTGGATGTGTCTTCAAT+AGG + chr8_3:21139260-21139279 Msa1281520:CDS 40.0%
TGGATGTGTCTTCAATAGGA+CGG + chr8_3:21139264-21139283 Msa1281520:CDS 40.0%
ATATCCTCCAGACTGAAGAT+TGG - chr8_3:21139442-21139461 None:intergenic 40.0%
AGTCTGGAGGATATTGAAGA+AGG + chr8_3:21139448-21139467 Msa1281520:CDS 40.0%
TTGAAGAAGGAGTAGAAGGT+AGG + chr8_3:21139461-21139480 Msa1281520:intron 40.0%
TGCTTGCTTTCTTGCTTCTT+TGG + chr8_3:21139596-21139615 Msa1281520:intron 40.0%
!!! TTTTGTTGACTCTACGCTGA+TGG + chr8_3:21139803-21139822 Msa1281520:CDS 40.0%
TACTCCAGAAACTCTTCTGA+AGG + chr8_3:21139851-21139870 Msa1281520:CDS 40.0%
GCTATTCATGTTATCAGCTG+TGG + chr8_3:21139876-21139895 Msa1281520:CDS 40.0%
TGTTATCAGCTGTGGTTATG+AGG + chr8_3:21139884-21139903 Msa1281520:intron 40.0%
TAAATCAGAATGGGGAACAG+AGG + chr8_3:21139908-21139927 Msa1281520:intron 40.0%
ACAAGACATGAACCTCCTTT+GGG - chr8_3:21140080-21140099 None:intergenic 40.0%
AACAAGACATGAACCTCCTT+TGG - chr8_3:21140081-21140100 None:intergenic 40.0%
CTATATACTGCATGCCTAAG+CGG + chr8_3:21140356-21140375 Msa1281520:CDS 40.0%
TCTAAACCAAGTGCTTCGAT+GGG + chr8_3:21140420-21140439 Msa1281520:CDS 40.0%
! GTTATGGTGGAAGACTAAAG+TGG + chr8_3:21140494-21140513 Msa1281520:CDS 40.0%
ACAATACATGAGAAGGGGAA+TGG - chr8_3:21140566-21140585 None:intergenic 40.0%
GCAAGGTACAATACATGAGA+AGG - chr8_3:21140573-21140592 None:intergenic 40.0%
AAACAAGTTCATCATCCCTC+AGG + chr8_3:21140612-21140631 Msa1281520:CDS 40.0%
GGATATCCTTAGAGTGTGTT+TGG + chr8_3:21140776-21140795 Msa1281520:intron 40.0%
CTTCATCCAAACACACTCTA+AGG - chr8_3:21140785-21140804 None:intergenic 40.0%
TACATGTGTCAGTGTCATGT+CGG - chr8_3:21140920-21140939 None:intergenic 40.0%
TCTGACTTCCACTAACACAT+AGG - chr8_3:21140977-21140996 None:intergenic 40.0%
! AATCTAGAGTTCCTGACCTT+TGG + chr8_3:21141068-21141087 Msa1281520:intron 40.0%
GTAGTCCAATCATCATCCAA+AGG - chr8_3:21141087-21141106 None:intergenic 40.0%
GCAGTCTGATCTTATTCCAA+TGG + chr8_3:21141141-21141160 Msa1281520:intron 40.0%
CTGATCTTATTCCAATGGTC+GGG + chr8_3:21141146-21141165 Msa1281520:intron 40.0%
! GTGGAGAAACGAACAGTTTT+GGG + chr8_3:21141370-21141389 Msa1281520:CDS 40.0%
!! GGTCTACTAAAAGTACTTGC+TGG + chr8_3:21141434-21141453 Msa1281520:intron 40.0%
!! TCTAGTTTGAGAGTATCAGG+TGG + chr8_3:21141585-21141604 Msa1281520:intron 40.0%
GTTCACAACTGACAGGTTTC+AGG - chr8_3:21134199-21134218 None:intergenic 45.0%
AACCTGTCAGTTGTGAACTC+CGG + chr8_3:21134201-21134220 Msa1281520:five_prime_UTR 45.0%
AGGGACAAATGTCACTCATC+CGG - chr8_3:21134223-21134242 None:intergenic 45.0%
!! ATAGGGAGCTGTTTCTGAAG+TGG + chr8_3:21134929-21134948 Msa1281520:five_prime_UTR 45.0%
!! TAGGGAGCTGTTTCTGAAGT+GGG + chr8_3:21134930-21134949 Msa1281520:five_prime_UTR 45.0%
GGGAAAGCCAATGACAACAT+TGG + chr8_3:21135182-21135201 Msa1281520:intron 45.0%
TGATCGCCCAATGTTGTCAT+TGG - chr8_3:21135192-21135211 None:intergenic 45.0%
TCAAGCATGCAAGATTTGCG+GGG + chr8_3:21135209-21135228 Msa1281520:CDS 45.0%
CGGGGAAAATATTGGGAAGA+CGG + chr8_3:21135227-21135246 Msa1281520:CDS 45.0%
TCGTAACAAAGCCGACAAAC+AGG - chr8_3:21135294-21135313 None:intergenic 45.0%
! ACCCGATACAAGAGGCATAA+AGG + chr8_3:21135357-21135376 Msa1281520:intron 45.0%
TTCCCCGTATAAACGAGGAA+TGG - chr8_3:21135635-21135654 None:intergenic 45.0%
ATTCCTCGTTTATACGGGGA+AGG + chr8_3:21135634-21135653 Msa1281520:intron 45.0%
GACCTTTGCTTGGAAGCTAA+TGG + chr8_3:21135892-21135911 Msa1281520:intron 45.0%
! GTCCATTAGCTTCCAAGCAA+AGG - chr8_3:21135897-21135916 None:intergenic 45.0%
ACAGGAAGTCCTGCAGTTAT+TGG + chr8_3:21136183-21136202 Msa1281520:CDS 45.0%
GAAGATTTCAGAGCGCATGT+TGG + chr8_3:21136284-21136303 Msa1281520:CDS 45.0%
AGATTTCAGAGCGCATGTTG+GGG + chr8_3:21136286-21136305 Msa1281520:CDS 45.0%
ACGGGCCTCTGAATGAAATT+TGG + chr8_3:21136452-21136471 Msa1281520:intron 45.0%
ATGACATTGAGAGCCTCTCA+GGG - chr8_3:21136521-21136540 None:intergenic 45.0%
CGGACGAATATGGAAGACTA+TGG - chr8_3:21136572-21136591 None:intergenic 45.0%
GCATGGAGAGAAAGAGTTGA+CGG + chr8_3:21136756-21136775 Msa1281520:CDS 45.0%
CAATAGAGCAATGAGTCAGG+AGG - chr8_3:21137140-21137159 None:intergenic 45.0%
CTCCTGACTCATTGCTCTAT+TGG + chr8_3:21137138-21137157 Msa1281520:intron 45.0%
TGCCAATAGAGCAATGAGTC+AGG - chr8_3:21137143-21137162 None:intergenic 45.0%
TTCAACAGCATGTGTGACTG+AGG + chr8_3:21137175-21137194 Msa1281520:intron 45.0%
TGACTCATTCCAAGAGGGTT+TGG + chr8_3:21137257-21137276 Msa1281520:intron 45.0%
ATTGGTCATTGTTCTGCGAC+TGG + chr8_3:21137597-21137616 Msa1281520:CDS 45.0%
AATGCATATGCATTGCGGAC+CGG - chr8_3:21137661-21137680 None:intergenic 45.0%
AGATATGTTTCGCGGTTGAC+AGG - chr8_3:21137757-21137776 None:intergenic 45.0%
AGGAGAACCTTCTCAACTAG+CGG + chr8_3:21137893-21137912 Msa1281520:CDS 45.0%
TAGCAGGAAACCTTATCCAC+TGG - chr8_3:21138011-21138030 None:intergenic 45.0%
TCCTGCTATGTCTCTGATGA+CGG + chr8_3:21138023-21138042 Msa1281520:CDS 45.0%
CAAGGATCGTAGAGCAATGA+AGG + chr8_3:21138205-21138224 Msa1281520:CDS 45.0%
ATAGATGAATGTCGAGCCAG+CGG - chr8_3:21138259-21138278 None:intergenic 45.0%
CAACGAAAGTTCCGGAAGAA+GGG + chr8_3:21138394-21138413 Msa1281520:CDS 45.0%
TAATGCAAGATGGTACACCG+TGG + chr8_3:21138421-21138440 Msa1281520:CDS 45.0%
! TGGTCTCTGACGTTATTTCC+AGG - chr8_3:21138447-21138466 None:intergenic 45.0%
AATAACGTCAGAGACCATCC+GGG + chr8_3:21138450-21138469 Msa1281520:CDS 45.0%
CAATTGGTCCGAAAGGTCAA+GGG - chr8_3:21138534-21138553 None:intergenic 45.0%
ACAATTGGTCCGAAAGGTCA+AGG - chr8_3:21138535-21138554 None:intergenic 45.0%
! CAGGTTTTCTTAGGCCAAAG+TGG + chr8_3:21138641-21138660 Msa1281520:intron 45.0%
! GTTTTCTTAGGCCAAAGTGG+AGG + chr8_3:21138644-21138663 Msa1281520:CDS 45.0%
CACCAGCTTTCTTGTGATGT+TGG - chr8_3:21138736-21138755 None:intergenic 45.0%
GGAGGCTATGTGCTTTATGA+TGG + chr8_3:21138945-21138964 Msa1281520:CDS 45.0%
GCAAACATGTTTACCGAGGT+TGG - chr8_3:21138974-21138993 None:intergenic 45.0%
CATCAAACCTCTGTGGAAAC+TGG - chr8_3:21139002-21139021 None:intergenic 45.0%
CAGTTTCCACAGAGGTTTGA+TGG + chr8_3:21139000-21139019 Msa1281520:CDS 45.0%
AGAGGTTTGGATGGCATTCA+AGG + chr8_3:21139223-21139242 Msa1281520:CDS 45.0%
!! CATCCAGTACCGACATAAAC+AGG - chr8_3:21139250-21139269 None:intergenic 45.0%
GACTGAAGATTGGCACAGTT+GGG - chr8_3:21139432-21139451 None:intergenic 45.0%
AGACTGAAGATTGGCACAGT+TGG - chr8_3:21139433-21139452 None:intergenic 45.0%
AACTGTGCCAATCTTCAGTC+TGG + chr8_3:21139432-21139451 Msa1281520:CDS 45.0%
!! GTTTCTGGAGTAGCATTCTG+AGG - chr8_3:21139843-21139862 None:intergenic 45.0%
! TCCAGAAACTCTTCTGAAGG+AGG + chr8_3:21139854-21139873 Msa1281520:CDS 45.0%
AGTATATAGACCGCCAACCA+CGG - chr8_3:21140345-21140364 None:intergenic 45.0%
GGTGCAGAACCTTTAAATGC+TGG - chr8_3:21140382-21140401 None:intergenic 45.0%
GTCTAAACCAAGTGCTTCGA+TGG + chr8_3:21140419-21140438 Msa1281520:CDS 45.0%
TGTCCCATCTGGTATGGTTA+TGG + chr8_3:21140478-21140497 Msa1281520:CDS 45.0%
CCACCATAACCATACCAGAT+GGG - chr8_3:21140484-21140503 None:intergenic 45.0%
TCCACCATAACCATACCAGA+TGG - chr8_3:21140485-21140504 None:intergenic 45.0%
GAAGACTAAAGTGGCTTGAG+AGG + chr8_3:21140503-21140522 Msa1281520:CDS 45.0%
TTTGTGAGAAGACAGACAGC+TGG - chr8_3:21140595-21140614 None:intergenic 45.0%
TTCTTTGAGCTCAGCAGTCA+AGG - chr8_3:21141033-21141052 None:intergenic 45.0%
CCAATCATCATCCAAAGGTC+AGG - chr8_3:21141082-21141101 None:intergenic 45.0%
CCTGACCTTTGGATGATGAT+TGG + chr8_3:21141079-21141098 Msa1281520:intron 45.0%
CTGGAATCCTAGAGATGAGA+TGG + chr8_3:21141324-21141343 Msa1281520:CDS 45.0%
ATCCTAGAGATGAGATGGAG+TGG + chr8_3:21141329-21141348 Msa1281520:CDS 45.0%
! GGTGGAGAAACGAACAGTTT+TGG + chr8_3:21141369-21141388 Msa1281520:CDS 45.0%
!!! GAACAGTTTTGGGTTATCGG+TGG + chr8_3:21141380-21141399 Msa1281520:CDS 45.0%
!!! TTAATATTTTATAAAAACAA+AGG + chr8_3:21135843-21135862 Msa1281520:intron 5.0%
ATCCGGAGTTCACAACTGAC+AGG - chr8_3:21134206-21134225 None:intergenic 50.0%
TCACGGTGACCGAATCATGA+TGG - chr8_3:21134617-21134636 None:intergenic 50.0%
! ATCACCATGATGGAGCCAGA+AGG + chr8_3:21134980-21134999 Msa1281520:exon 50.0%
! TCACCATGATGGAGCCAGAA+GGG + chr8_3:21134981-21135000 Msa1281520:exon 50.0%
GGGGAAGGTCCAAAAGACTA+TGG + chr8_3:21135649-21135668 Msa1281520:intron 50.0%
TGCTCTCTCCTCTTCTTCAC+TGG - chr8_3:21135928-21135947 None:intergenic 50.0%
GGAGATAGTGAAGAGGAGGT+AGG + chr8_3:21136204-21136223 Msa1281520:CDS 50.0%
GATAGTGAAGAGGAGGTAGG+CGG + chr8_3:21136207-21136226 Msa1281520:CDS 50.0%
CACATTCCTAGGCTGACAAG+TGG + chr8_3:21136378-21136397 Msa1281520:CDS 50.0%
ATTCAGAGGCCCGTAGTTGA+AGG - chr8_3:21136446-21136465 None:intergenic 50.0%
! GTGTCTGGAGAGTTTTCTGC+AGG + chr8_3:21136492-21136511 Msa1281520:CDS 50.0%
TGACATTGAGAGCCTCTCAG+GGG - chr8_3:21136520-21136539 None:intergenic 50.0%
GATGACATTGAGAGCCTCTC+AGG - chr8_3:21136522-21136541 None:intergenic 50.0%
TCAATGTCATCACCCGTAGC+TGG + chr8_3:21136531-21136550 Msa1281520:CDS 50.0%
AATGCTGCTCCAATGAGCAC+AGG + chr8_3:21136801-21136820 Msa1281520:CDS 50.0%
! GCCAAGCTGCTTCTGAAAGA+GGG + chr8_3:21136823-21136842 Msa1281520:CDS 50.0%
! CCAAGCTGCTTCTGAAAGAG+GGG + chr8_3:21136824-21136843 Msa1281520:CDS 50.0%
TAGAGCAATGAGTCAGGAGG+AGG - chr8_3:21137137-21137156 None:intergenic 50.0%
GGTTGACAGGAAGCCACTTA+GGG - chr8_3:21137744-21137763 None:intergenic 50.0%
CAGTACCGTTGACCCGTTAA+AGG + chr8_3:21137932-21137951 Msa1281520:CDS 50.0%
! AGGCTCCTTTAACGGGTCAA+CGG - chr8_3:21137940-21137959 None:intergenic 50.0%
ACGAGTGGAGGCTCCTTTAA+CGG - chr8_3:21137948-21137967 None:intergenic 50.0%
! TTCTGTGCGAAGTACCACTC+GGG - chr8_3:21138146-21138165 None:intergenic 50.0%
! CTTCTGTGCGAAGTACCACT+CGG - chr8_3:21138147-21138166 None:intergenic 50.0%
TGCGAAGGCAACGAAAGTTC+CGG + chr8_3:21138386-21138405 Msa1281520:CDS 50.0%
GCAACGAAAGTTCCGGAAGA+AGG + chr8_3:21138393-21138412 Msa1281520:CDS 50.0%
GAAAGTTCCGGAAGAAGGGT+GGG + chr8_3:21138398-21138417 Msa1281520:CDS 50.0%
TGCATTACCCACCCTTCTTC+CGG - chr8_3:21138408-21138427 None:intergenic 50.0%
GAAGGGTGGGTAATGCAAGA+TGG + chr8_3:21138411-21138430 Msa1281520:CDS 50.0%
! CTGACGTTATTTCCAGGCCA+CGG - chr8_3:21138441-21138460 None:intergenic 50.0%
CAACCAACCTGGATCATTCC+CGG - chr8_3:21138471-21138490 None:intergenic 50.0%
CAGTGTCAAGTCCTCCACTT+TGG - chr8_3:21138658-21138677 None:intergenic 50.0%
AGTGGAGGACTTGACACTGA+TGG + chr8_3:21138659-21138678 Msa1281520:CDS 50.0%
!! GTTTCTCGTGAAAAGCGTCC+AGG + chr8_3:21138707-21138726 Msa1281520:CDS 50.0%
GCTATGTCCAGTTTCCACAG+AGG + chr8_3:21138992-21139011 Msa1281520:CDS 50.0%
GGTCCTGTTTATGTCGGTAC+TGG + chr8_3:21139244-21139263 Msa1281520:CDS 50.0%
TTGCTGTCATCACTCTGTGG+TGG + chr8_3:21139337-21139356 Msa1281520:CDS 50.0%
TGTGCCAATCTTCAGTCTGG+AGG + chr8_3:21139435-21139454 Msa1281520:CDS 50.0%
AGCACAACGTATGTCACGAG+AGG + chr8_3:21139749-21139768 Msa1281520:CDS 50.0%
GACTCTACGCTGATGGAGAA+TGG + chr8_3:21139810-21139829 Msa1281520:CDS 50.0%
TCTACGCTGATGGAGAATGG+TGG + chr8_3:21139813-21139832 Msa1281520:CDS 50.0%
GCCTCCTTCAGAAGAGTTTC+TGG - chr8_3:21139858-21139877 None:intergenic 50.0%
GTATATAGACCGCCAACCAC+GGG - chr8_3:21140344-21140363 None:intergenic 50.0%
CCTTTAAATGCTGGCCGCTT+AGG - chr8_3:21140373-21140392 None:intergenic 50.0%
CCTAAGCGGCCAGCATTTAA+AGG + chr8_3:21140370-21140389 Msa1281520:CDS 50.0%
! CTAAAGCCCATCGAAGCACT+TGG - chr8_3:21140429-21140448 None:intergenic 50.0%
! CAAGTGCTTCGATGGGCTTT+AGG + chr8_3:21140427-21140446 Msa1281520:CDS 50.0%
CATACCAGATGGGACAGTGT+CGG - chr8_3:21140474-21140493 None:intergenic 50.0%
CCCATCTGGTATGGTTATGG+TGG + chr8_3:21140481-21140500 Msa1281520:CDS 50.0%
GGCAGTGACTGGATAGATTG+TGG - chr8_3:21140545-21140564 None:intergenic 50.0%
TACGGGTGCCTATGTGTTAG+TGG + chr8_3:21140966-21140985 Msa1281520:intron 50.0%
CACCACTCCATCTCATCTCT+AGG - chr8_3:21141334-21141353 None:intergenic 50.0%
GAGATGAGATGGAGTGGTGT+TGG + chr8_3:21141335-21141354 Msa1281520:CDS 50.0%
! GTGGTGTTGGAATTGACGAG+TGG + chr8_3:21141348-21141367 Msa1281520:CDS 50.0%
GTGTTGGAATTGACGAGTGG+TGG + chr8_3:21141351-21141370 Msa1281520:CDS 50.0%
! CATCTTTTCGCCGTGTTCCA+AGG + chr8_3:21141413-21141432 Msa1281520:CDS 50.0%
! CACCATGATGGAGCCAGAAG+GGG + chr8_3:21134982-21135001 Msa1281520:exon 55.0%
!! TTCCCCTTCTGGCTCCATCA+TGG - chr8_3:21134987-21135006 None:intergenic 55.0%
GGACCTTCCCCGTATAAACG+AGG - chr8_3:21135640-21135659 None:intergenic 55.0%
TTTCAGAGCGCATGTTGGGG+TGG + chr8_3:21136289-21136308 Msa1281520:CDS 55.0%
TTGGGGTGGCAGTTGACACT+CGG + chr8_3:21136303-21136322 Msa1281520:CDS 55.0%
CAGTTGACACTCGGGAGATC+AGG + chr8_3:21136312-21136331 Msa1281520:CDS 55.0%
TCCTAGGCTGACAAGTGGAC+AGG + chr8_3:21136383-21136402 Msa1281520:CDS 55.0%
TCCTGTCCACTTGTCAGCCT+AGG - chr8_3:21136387-21136406 None:intergenic 55.0%
TAGGCTGACAAGTGGACAGG+AGG + chr8_3:21136386-21136405 Msa1281520:CDS 55.0%
ATGTCATCACCCGTAGCTGG+TGG + chr8_3:21136534-21136553 Msa1281520:CDS 55.0%
TGTCATCACCCGTAGCTGGT+GGG + chr8_3:21136535-21136554 Msa1281520:CDS 55.0%
GGAGAGAAAGAGTTGACGGC+TGG + chr8_3:21136760-21136779 Msa1281520:CDS 55.0%
! GGCCAAGCTGCTTCTGAAAG+AGG + chr8_3:21136822-21136841 Msa1281520:CDS 55.0%
CCCCTCTTTCAGAAGCAGCT+TGG - chr8_3:21136827-21136846 None:intergenic 55.0%
CGGTTGACAGGAAGCCACTT+AGG - chr8_3:21137745-21137764 None:intergenic 55.0%
TCGACAGCCGCTAGTTGAGA+AGG - chr8_3:21137903-21137922 None:intergenic 55.0%
CGAGTGGAGGCTCCTTTAAC+GGG - chr8_3:21137947-21137966 None:intergenic 55.0%
! GTATTGGCAGTCACGAGTGG+AGG - chr8_3:21137960-21137979 None:intergenic 55.0%
!! ACGGTATTGGCAGTCACGAG+TGG - chr8_3:21137963-21137982 None:intergenic 55.0%
GCCGTCATCAGAGACATAGC+AGG - chr8_3:21138027-21138046 None:intergenic 55.0%
CGAAAGTTCCGGAAGAAGGG+TGG + chr8_3:21138397-21138416 Msa1281520:CDS 55.0%
AGACCATCCGGGAATGATCC+AGG + chr8_3:21138461-21138480 Msa1281520:CDS 55.0%
CAACCTGGATCATTCCCGGA+TGG - chr8_3:21138467-21138486 None:intergenic 55.0%
CATCCGGGAATGATCCAGGT+TGG + chr8_3:21138465-21138484 Msa1281520:intron 55.0%
!! CAACAGCAAGGCTTTGAGGG+AGG + chr8_3:21138927-21138946 Msa1281520:CDS 55.0%
CAGAGTGATGACAGCAACCC+AGG - chr8_3:21139334-21139353 None:intergenic 55.0%
GGGTTGCTGTCATCACTCTG+TGG + chr8_3:21139334-21139353 Msa1281520:CDS 55.0%
TTAGCCGACACTGTCCCATC+TGG + chr8_3:21140467-21140486 Msa1281520:CDS 55.0%
CGACACTGTCCCATCTGGTA+TGG + chr8_3:21140472-21140491 Msa1281520:CDS 55.0%
AGAAGGGGAATGGCAGTGAC+TGG - chr8_3:21140556-21140575 None:intergenic 55.0%
GAGAAGACAGACAGCTGGCA+AGG - chr8_3:21140590-21140609 None:intergenic 55.0%
CAGTTGTTGAGCCCGACCAT+TGG - chr8_3:21141160-21141179 None:intergenic 55.0%
ATGGAGCCAGAAGGGGAAGC+TGG + chr8_3:21134989-21135008 Msa1281520:CDS 60.0%
TGGAGCCAGAAGGGGAAGCT+GGG + chr8_3:21134990-21135009 Msa1281520:CDS 60.0%
TGGGGTGGCAGTTGACACTC+GGG + chr8_3:21136304-21136323 Msa1281520:CDS 60.0%
CTCGGGAGATCAGGAGAGCT+TGG + chr8_3:21136321-21136340 Msa1281520:CDS 60.0%
TTTCTGCAGGCTCCCCTGAG+AGG + chr8_3:21136505-21136524 Msa1281520:CDS 60.0%
GTCATCACCCGTAGCTGGTG+GGG + chr8_3:21136536-21136555 Msa1281520:CDS 60.0%
TCATCACCCGTAGCTGGTGG+GGG + chr8_3:21136537-21136556 Msa1281520:CDS 60.0%
GCAGCTTGGCCTGTGCTCAT+TGG - chr8_3:21136813-21136832 None:intergenic 60.0%
! GCTGCTTCTGAAAGAGGGGC+TGG + chr8_3:21136828-21136847 Msa1281520:CDS 60.0%
AAGCTCGGCAGCCTCTTTCC+AGG + chr8_3:21137536-21137555 Msa1281520:CDS 60.0%
TCGGCAGCCTCTTTCCAGGA+AGG + chr8_3:21137540-21137559 Msa1281520:CDS 60.0%
AAGTACCACTCGGGTGCACG+GGG - chr8_3:21138137-21138156 None:intergenic 60.0%
! GAAGTACCACTCGGGTGCAC+GGG - chr8_3:21138138-21138157 None:intergenic 60.0%
! CGAAGTACCACTCGGGTGCA+CGG - chr8_3:21138139-21138158 None:intergenic 60.0%
CAAGATGGTACACCGTGGCC+TGG + chr8_3:21138426-21138445 Msa1281520:CDS 60.0%
GGATTCAAGATGCACGCCCG+TGG + chr8_3:21140325-21140344 Msa1281520:CDS 60.0%
TCAAGATGCACGCCCGTGGT+TGG + chr8_3:21140329-21140348 Msa1281520:CDS 60.0%
GGAGCCAGAAGGGGAAGCTG+GGG + chr8_3:21134991-21135010 Msa1281520:CDS 65.0%
CTCACCCCAGCTTCCCCTTC+TGG - chr8_3:21134998-21135017 None:intergenic 65.0%
CATCACCCGTAGCTGGTGGG+GGG + chr8_3:21136538-21136557 Msa1281520:CDS 65.0%
ACGCTTCCCCCCACCAGCTA+CGG - chr8_3:21136547-21136566 None:intergenic 65.0%
TTGAACCCCGTGCACCCGAG+TGG + chr8_3:21138129-21138148 Msa1281520:CDS 65.0%
AGATGCACGCCCGTGGTTGG+CGG + chr8_3:21140332-21140351 Msa1281520:CDS 65.0%
CGCTTCCCCCCACCAGCTAC+GGG - chr8_3:21136546-21136565 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 21134136 21141617 21134136 ID=Msa1281520;Name=Msa1281520
chr8_3 mRNA 21134136 21141617 21134136 ID=Msa1281520-mRNA-1;Parent=Msa1281520;Name=Msa1281520-mRNA-1;_AED=0.10;_eAED=0.10;_QI=259|0.8|0.62|0.93|0.93|0.93|16|0|922
chr8_3 exon 21134136 21134334 21134136 ID=Msa1281520-mRNA-1:exon:7674;Parent=Msa1281520-mRNA-1
chr8_3 exon 21134926 21135012 21134926 ID=Msa1281520-mRNA-1:exon:7675;Parent=Msa1281520-mRNA-1
chr8_3 exon 21135183 21135342 21135183 ID=Msa1281520-mRNA-1:exon:7676;Parent=Msa1281520-mRNA-1
chr8_3 exon 21136169 21136407 21136169 ID=Msa1281520-mRNA-1:exon:7677;Parent=Msa1281520-mRNA-1
chr8_3 exon 21136492 21136606 21136492 ID=Msa1281520-mRNA-1:exon:7678;Parent=Msa1281520-mRNA-1
chr8_3 exon 21136718 21136892 21136718 ID=Msa1281520-mRNA-1:exon:7679;Parent=Msa1281520-mRNA-1
chr8_3 exon 21137528 21137794 21137528 ID=Msa1281520-mRNA-1:exon:7680;Parent=Msa1281520-mRNA-1
chr8_3 exon 21137881 21138226 21137881 ID=Msa1281520-mRNA-1:exon:7681;Parent=Msa1281520-mRNA-1
chr8_3 exon 21138345 21138482 21138345 ID=Msa1281520-mRNA-1:exon:7682;Parent=Msa1281520-mRNA-1
chr8_3 exon 21138644 21138769 21138644 ID=Msa1281520-mRNA-1:exon:7683;Parent=Msa1281520-mRNA-1
chr8_3 exon 21138859 21139071 21138859 ID=Msa1281520-mRNA-1:exon:7684;Parent=Msa1281520-mRNA-1
chr8_3 exon 21139214 21139478 21139214 ID=Msa1281520-mRNA-1:exon:7685;Parent=Msa1281520-mRNA-1
chr8_3 exon 21139727 21139897 21139727 ID=Msa1281520-mRNA-1:exon:7686;Parent=Msa1281520-mRNA-1
chr8_3 exon 21140287 21140633 21140287 ID=Msa1281520-mRNA-1:exon:7687;Parent=Msa1281520-mRNA-1
chr8_3 exon 21141269 21141434 21141269 ID=Msa1281520-mRNA-1:exon:7688;Parent=Msa1281520-mRNA-1
chr8_3 exon 21141604 21141617 21141604 ID=Msa1281520-mRNA-1:exon:7689;Parent=Msa1281520-mRNA-1
chr8_3 five_prime_UTR 21134136 21134334 21134136 ID=Msa1281520-mRNA-1:five_prime_utr;Parent=Msa1281520-mRNA-1
chr8_3 five_prime_UTR 21134926 21134985 21134926 ID=Msa1281520-mRNA-1:five_prime_utr;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21134986 21135012 21134986 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21135183 21135342 21135183 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21136169 21136407 21136169 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21136492 21136606 21136492 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21136718 21136892 21136718 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21137528 21137794 21137528 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21137881 21138226 21137881 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21138345 21138482 21138345 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21138644 21138769 21138644 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21138859 21139071 21138859 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21139214 21139478 21139214 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21139727 21139897 21139727 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21140287 21140633 21140287 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21141269 21141434 21141269 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
chr8_3 CDS 21141604 21141617 21141604 ID=Msa1281520-mRNA-1:cds;Parent=Msa1281520-mRNA-1
Gene Sequence

>Msa1281520

ATGATGGAGCCAGAAGGGGAAGCTGGGGGAAAGCCAATGACAACATTGGGCGATCAAGCATGCAAGATTTGCGGGGAAAATATTGGGAAGACGGTTGATGGCGAACCATTCATTGCATGTGATGCTTGTGCTTTTCCTGTTTGTCGGCTTTGTTACGAGTATGAAAGGAAAGATGGGAAACAGTCTTTTCACTTATTGATTACAGGAAGTCCTGCAGTTATTGGAGATAGTGAAGAGGAGGTAGGCGGTGATGATGTTGCTCTTGAATTCAATTATGATTTGGAAAACCAAAACCAAAAGCAGAAGATTTCAGAGCGCATGTTGGGGTGGCAGTTGACACTCGGGAGATCAGGAGAGCTTGGCACTCCAAATTATGATAAGGAGGTTTCTCACAATCACATTCCTAGGCTGACAAGTGGACAGGAGGTGTCTGGAGAGTTTTCTGCAGGCTCCCCTGAGAGGCTCTCAATGTCATCACCCGTAGCTGGTGGGGGGAAGCGTGTCCATAGTCTTCCATATTCGTCCGATGTTAATCAATCTCCAAATACCAGGATTGTTGACGCAAAATTGGGCAATGTAGCATGGAGAGAAAGAGTTGACGGCTGGAAGATGAAGCCAGAAAAGAATGCTGCTCCAATGAGCACAGGCCAAGCTGCTTCTGAAAGAGGGGCTGGAGATATTGATGCCAGATCTGATGTATTTGATGATTCATTGTTGAATGATGAAGCTCGGCAGCCTCTTTCCAGGAAGGTTTCTATTCCATCATCTAGGATAAATCCATATCGATTGGTCATTGTTCTGCGACTGGTTGTCCTTTGCATTTTCTTGCATTATCGGTTAACAAATCCGGTCCGCAATGCATATGCATTATGGTTGGTATCAGTTATATGCGAGATTTGGTTTGCCATATCCTGGATATTGGATCAATTCCCTAAGTGGCTTCCTGTCAACCGCGAAACATATCTCGATAGACTTGCACTAAGATATGATCGGGAAGGAGAACCTTCTCAACTAGCGGCTGTCGACATTTTTGTCAGTACCGTTGACCCGTTAAAGGAGCCTCCACTCGTGACTGCCAATACCGTACTTTCTATTCTTTCAGTTGACTATCCAGTGGATAAGGTTTCCTGCTATGTCTCTGATGACGGCGCCGCTATGTTGACATTTGAAGCTCTTGCTGAAACATCAGAGTTTGCGAGAAAATGGGTTCCTTTCACCAAGAAGTATAATATTGAACCCCGTGCACCCGAGTGGTACTTCGCACAGAAGATTGATTACTTGAAGGATAAAGTTCAGACATCATTTGTCAAGGATCGTAGAGCAATGAAGAGAGAATACGAAGAATTTAAAATTCGTATTAATGGACTTGTTGCGAAGGCAACGAAAGTTCCGGAAGAAGGGTGGGTAATGCAAGATGGTACACCGTGGCCTGGAAATAACGTCAGAGACCATCCGGGAATGATCCAGGTTTTCTTAGGCCAAAGTGGAGGACTTGACACTGATGGCAATGAACTTCCCCGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGTTTCCAACATCACAAGAAAGCTGGTGCCATGAATGCACTTGTTCGAGTATCTGCTGTCCTTACTAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCTTTGAGGGAGGCTATGTGCTTTATGATGGATCCCAACCTCGGTAAACATGTTTGCTATGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGGAACGATCGATATGCCAATCGTAATACTGTTTTCTTTGACATAAATCTGAGAGGTTTGGATGGCATTCAAGGTCCTGTTTATGTCGGTACTGGATGTGTCTTCAATAGGACGGCTTTATACGGCGAAGAACCTCCTCTTAAAGTGAAACATAAAAAGCCTGGGTTGCTGTCATCACTCTGTGGTGGAAGTAGAAAGAAGAGTTCAAAATCTAGTAAGAAAGGATCAGACAAGAAAAAGTATAACAAGCACGTCGACCCAACTGTGCCAATCTTCAGTCTGGAGGATATTGAAGAAGGAGTAGAAGGTTCTGGATTTGATGATGAGAGAGCACAACGTATGTCACGAGAGGACTATGAGAAAAGATTCGGCCAATCATCTGTTTTTGTTGACTCTACGCTGATGGAGAATGGTGGCGTTCCTCAGAATGCTACTCCAGAAACTCTTCTGAAGGAGGCTATTCATGTTATCAGCTGTGGATGGATTTATGGTTCCGTCACAGAAGATATTCTTACTGGATTCAAGATGCACGCCCGTGGTTGGCGGTCTATATACTGCATGCCTAAGCGGCCAGCATTTAAAGGTTCTGCACCCATCAATCTTTCTGATCGTCTAAACCAAGTGCTTCGATGGGCTTTAGGTTCTGTTGAAATTCTTTTTAGCCGACACTGTCCCATCTGGTATGGTTATGGTGGAAGACTAAAGTGGCTTGAGAGGTTTGCATATATTAACACCACAATCTATCCAGTCACTGCCATTCCCCTTCTCATGTATTGTACCTTGCCAGCTGTCTGTCTTCTCACAAACAAGTTCATCATCCCTCAGATTAGCAACTTAGCTAGTATATGGTTTATCTCTCTCTTTCTTTCAATCTTCGCAACTGGAATCCTAGAGATGAGATGGAGTGGTGTTGGAATTGACGAGTGGTGGAGAAACGAACAGTTTTGGGTTATCGGTGGTGTGTCAGCACATCTTTTCGCCGTGTTCCAAGGTGGAGCCAAGTAA
Protein sequence

>Msa1281520

MMEPEGEAGGKPMTTLGDQACKICGENIGKTVDGEPFIACDACAFPVCRLCYEYERKDGKQSFHLLITGSPAVIGDSEEEVGGDDVALEFNYDLENQNQKQKISERMLGWQLTLGRSGELGTPNYDKEVSHNHIPRLTSGQEVSGEFSAGSPERLSMSSPVAGGGKRVHSLPYSSDVNQSPNTRIVDAKLGNVAWRERVDGWKMKPEKNAAPMSTGQAASERGAGDIDARSDVFDDSLLNDEARQPLSRKVSIPSSRINPYRLVIVLRLVVLCIFLHYRLTNPVRNAYALWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFTKKYNIEPRAPEWYFAQKIDYLKDKVQTSFVKDRRAMKREYEEFKIRINGLVAKATKVPEEGWVMQDGTPWPGNNVRDHPGMIQVFLGQSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGEEPPLKVKHKKPGLLSSLCGGSRKKSSKSSKKGSDKKKYNKHVDPTVPIFSLEDIEEGVEGSGFDDERAQRMSREDYEKRFGQSSVFVDSTLMENGGVPQNATPETLLKEAIHVISCGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYINTTIYPVTAIPLLMYCTLPAVCLLTNKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGGAK*