AlfalfaGEDB | Msa1285020

M. sativa cultivar zhongmu-4 / Msa1285020

KEGG: K11592
GO: GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009892 GO:0009987 GO:0010033 GO:0010216 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016442 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031332 GO:0032296 GO:0032991 GO:0034641 GO:0035194 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051214 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098542 GO:0098586 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904
PFAM: PF00636.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1285020	XP_003594551.2	94.444	342	19	0	3	344	1036	1377	0.0	673

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1285020	sp\|Q3EBC8\|DCL2_ARATH	57.726	343	138	4	2	342	1046	1383	3.40e-127	399

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1285020	G7IKX1	94.444	342	19	0	3	344	1036	1377	0.0	673

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa1189820	Msa1285020	0.898825	3.628914e-77	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1285020	MtrunA17_Chr2g0292651	94.444	342	19	0	3	344	1036	1377	0.0	673
Msa1285020	MtrunA17_Chr1g0179081	85.507	345	49	1	1	344	1061	1405	0.0	622
Msa1285020	MtrunA17_Chr8g0368761	85.507	345	49	1	1	344	1038	1382	0.0	615
Msa1285020	MtrunA17_Chr7g0276451	39.130	368	177	9	3	331	1408	1767	6.43e-67	228
Msa1285020	MtrunA17_Chr3g0136471	36.364	330	186	3	3	309	1169	1497	2.36e-59	206
Msa1285020	MtrunA17_Chr4g0065391	35.817	349	200	6	3	330	1081	1426	4.92e-53	188
Msa1285020	MtrunA17_Chr3g0119171	36.667	240	136	5	107	342	230	457	1.10e-35	136
Msa1285020	MtrunA17_Chr3g0119071	41.989	181	101	2	107	287	169	345	1.60e-35	135
Msa1285020	MtrunA17_Chr3g0130581	34.286	245	147	7	103	342	8	243	2.91e-33	126
Msa1285020	MtrunA17_Chr3g0119181	37.017	181	108	2	107	287	72	246	1.10e-32	124
Msa1285020	MtrunA17_Chr8g0360081	32.520	246	150	8	103	342	8	243	1.38e-31	121
Msa1285020	MtrunA17_Chr8g0373421	90.909	44	4	0	97	140	8	51	4.80e-22	88.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1285020	AT3G03300.4	57.726	343	138	4	2	342	833	1170	9.74e-130	399
Msa1285020	AT3G03300.3	57.726	343	138	4	2	342	1046	1383	3.46e-128	399
Msa1285020	AT3G03300.1	57.726	343	138	4	2	342	1046	1383	3.46e-128	399
Msa1285020	AT3G03300.2	57.726	343	138	4	2	342	1032	1369	4.07e-128	398
Msa1285020	AT1G01040.1	39.560	364	179	11	3	331	1427	1784	3.77e-65	223
Msa1285020	AT1G01040.2	39.560	364	179	11	3	331	1428	1785	4.07e-65	223
Msa1285020	AT3G43920.4	37.330	367	191	9	2	341	1062	1416	5.72e-58	202
Msa1285020	AT3G43920.5	37.330	367	191	9	2	341	1063	1417	6.30e-58	202
Msa1285020	AT3G43920.3	37.330	367	191	9	2	341	1063	1417	6.80e-58	202
Msa1285020	AT3G43920.6	37.330	367	191	9	2	341	845	1199	6.95e-58	202
Msa1285020	AT3G43920.1	37.330	367	191	9	2	341	1024	1378	7.09e-58	202
Msa1285020	AT3G43920.2	37.330	367	191	9	2	341	1073	1427	7.78e-58	202
Msa1285020	AT5G20320.3	36.913	298	181	3	41	333	999	1294	1.62e-54	192
Msa1285020	AT5G20320.2	36.913	298	181	3	41	333	1210	1505	1.98e-54	192
Msa1285020	AT5G20320.1	36.913	298	181	3	41	333	1224	1519	2.10e-54	192
Msa1285020	AT4G15417.1	35.918	245	144	6	96	338	21	254	2.31e-38	137
Msa1285020	AT4G15417.2	35.918	245	144	6	96	338	46	279	4.37e-38	137
Msa1285020	AT3G20420.1	34.225	187	118	3	103	287	59	242	1.48e-25	106
Msa1285020	AT5G45150.1	33.523	176	107	3	103	277	3	169	3.02e-25	107
Msa1285020	AT5G45150.1	29.825	171	110	3	103	273	414	574	1.82e-16	81.3
Msa1285020	AT5G45150.2	29.825	171	110	3	103	273	218	378	2.08e-16	80.9
Msa1285020	AT5G45150.3	29.825	171	110	3	103	273	218	378	2.08e-16	80.9

Find 85 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATGGCTGCATTGTTGTTTA+TGG	0.170640	8_3:+28498810	Msa1285020:CDS
CTTATGCAATTCAACCTTAA+TGG	0.180930	8_3:-28499689	None:intergenic
GGTGCTATATTTGTTGATTC+AGG	0.243577	8_3:+28500434	Msa1285020:CDS
TATCTATTCTTCTGAGTTGC+AGG	0.270388	8_3:+28498594	None:intergenic
GCTAGTAACGCCGTCGTTCC+TGG	0.290736	8_3:-28500597	None:intergenic
GAAAAGCATAAGGCCGCTTT+TGG	0.292667	8_3:+28500478	Msa1285020:CDS
TTATGCAATGTCTGCCATTA+AGG	0.299227	8_3:+28499675	Msa1285020:CDS
CCCTATTGAAGTATTCGTTC+AGG	0.314249	8_3:+28498929	Msa1285020:CDS
ACATAACTTGTGTATATCTA+AGG	0.328303	8_3:+28500761	Msa1285020:three_prime_UTR
TCCTATTGTTTGCAGGTACT+TGG	0.347435	8_3:+28500389	Msa1285020:intron
GGTCAGTCTTCATCAAGTTT+TGG	0.347844	8_3:+28499775	Msa1285020:CDS
CCCTGAACGAATACTTCAAT+AGG	0.366092	8_3:-28498930	None:intergenic
CCGAAGACCTGGATCATTCC+TGG	0.367949	8_3:+28498643	Msa1285020:CDS
CCATCTCACCACCGGCGTTA+AGG	0.377907	8_3:-28498792	None:intergenic
AAACTTCCTGATTTAGCTCC+AGG	0.394976	8_3:-28498661	None:intergenic
TCCCTTGCAAGCTAGTCTTT+TGG	0.396856	8_3:-28500693	None:intergenic
GGATTGATCGTTAATGTATC+AGG	0.398441	8_3:-28500515	None:intergenic
CCTGCAGCGACTTGAATACT+TGG	0.413321	8_3:+28499543	Msa1285020:intron
ATCCAGGTCTTCGGATCAAA+AGG	0.413934	8_3:-28498634	None:intergenic
TGTTGTTTATGGATTGGATT+GGG	0.415903	8_3:+28498821	Msa1285020:CDS
CTGCATTGTTGTTTATGGAT+TGG	0.430699	8_3:+28498815	Msa1285020:CDS
ATCATTCCTGGAGCTAAATC+AGG	0.431871	8_3:+28498655	Msa1285020:CDS
GATGTTGTCGAAGCACTAAT+TGG	0.451753	8_3:+28498763	Msa1285020:CDS
AGCAATGAATTGCCTCTCAT+AGG	0.457036	8_3:-28498869	None:intergenic
CCAGGAATGATCCAGGTCTT+CGG	0.457172	8_3:-28498643	None:intergenic
ACTACGCTTGATAAATTTGA+CGG	0.462510	8_3:+28499754	Msa1285020:CDS
TGTTGATTCAGGATACGATA+AGG	0.478957	8_3:+28500445	Msa1285020:CDS
GTATATCCTGGCATGTCACC+TGG	0.479304	8_3:+28499610	Msa1285020:CDS
TTGTTGTTTATGGATTGGAT+TGG	0.489156	8_3:+28498820	Msa1285020:CDS
CCTATTGAAGTATTCGTTCA+GGG	0.490841	8_3:+28498930	Msa1285020:CDS
CCTGAACGAATACTTCAATA+GGG	0.498705	8_3:-28498929	None:intergenic
ATCTATTCTTCTGAGTTGCA+GGG	0.499126	8_3:+28498595	None:intergenic
AACCTTGGGGAATGTGGCCT+CGG	0.505220	8_3:-28499806	None:intergenic
TCTGACATTAACTAGATTGT+CGG	0.510869	8_3:-28498896	None:intergenic
GCAATGAATTGCCTCTCATA+GGG	0.511304	8_3:-28498868	None:intergenic
CCTTAACGCCGGTGGTGAGA+TGG	0.513005	8_3:+28498792	Msa1285020:CDS
CTGAGTTGCAGGGCTTCATA+CGG	0.516386	8_3:+28498605	Msa1285020:CDS
CTGACATTAACTAGATTGTC+GGG	0.519509	8_3:-28498895	None:intergenic
AATCGAGGTAATTGCGGATG+GGG	0.520262	8_3:+28500625	Msa1285020:CDS
CTCATGTCTGTTAACTGCCC+AGG	0.520812	8_3:-28499628	None:intergenic
AACTGCCCAGGTGACATGCC+AGG	0.524659	8_3:-28499616	None:intergenic
CAAACTAACCTTGGGGAATG+TGG	0.528045	8_3:-28499812	None:intergenic
GTACGTACCTGGTAGCATCT+AGG	0.528831	8_3:-28499009	None:intergenic
CATTTGTATCGAGTATATCC+TGG	0.535208	8_3:+28499598	Msa1285020:CDS
TTGTGTTTACTTCAATTGCA+AGG	0.538732	8_3:-28500726	None:intergenic
CTGCAGCGACTTGAATACTT+GGG	0.539822	8_3:+28499544	Msa1285020:intron
AACGCCGTCGTTCCTGGACA+AGG	0.543611	8_3:-28500591	None:intergenic
AGGTTGTGTGGAAAAGCATA+AGG	0.545534	8_3:+28500468	Msa1285020:CDS
TGCCAAAAGACTAGCTTGCA+AGG	0.548293	8_3:+28500691	Msa1285020:CDS
ATACTTGGGAGACTCGGTGC+TGG	0.548546	8_3:+28499558	Msa1285020:CDS
GTCACAAGGGGCTCCAAAAG+CGG	0.553399	8_3:-28500491	None:intergenic
AGTTCATTTAATTCTCTACT+CGG	0.557573	8_3:-28500536	None:intergenic
AAAATCGAGGTAATTGCGGA+TGG	0.563394	8_3:+28500623	Msa1285020:CDS
AAATCGAGGTAATTGCGGAT+GGG	0.566719	8_3:+28500624	Msa1285020:CDS
TGGTAGCATCTAGGCACGTC+GGG	0.569271	8_3:-28499000	None:intergenic
TTTAGCTCCAGGAATGATCC+AGG	0.571096	8_3:-28498650	None:intergenic
GACATCATAGAGTCTCTAGC+TGG	0.576299	8_3:+28500413	Msa1285020:CDS
CGACGTGCCTAGATGCTACC+AGG	0.577190	8_3:+28499002	Msa1285020:CDS
TTAATGTATCAGGTGTCACA+AGG	0.581564	8_3:-28500505	None:intergenic
CTATAAAATCGAGGTAATTG+CGG	0.584188	8_3:+28500619	Msa1285020:CDS
TTAATATCAATCCCTATGAG+AGG	0.595809	8_3:+28498857	Msa1285020:CDS
GTAGCTCTTGAGAGTCATGA+AGG	0.600480	8_3:-28499717	None:intergenic
TCCAGGTCTTCGGATCAAAA+GGG	0.601840	8_3:-28498633	None:intergenic
ACTTGAATACTTGGGAGACT+CGG	0.603022	8_3:+28499552	Msa1285020:CDS
CAATGCAGCCATCTCACCAC+CGG	0.605747	8_3:-28498800	None:intergenic
AACAGACATGAGGTCTGCAT+CGG	0.609651	8_3:+28499639	Msa1285020:CDS
CTAAGGAGAAGACCTTGTCC+AGG	0.609701	8_3:+28500579	Msa1285020:CDS
ATTCATCAGTTCGAGTACAA+AGG	0.610306	8_3:+28500650	Msa1285020:CDS
GCCAAAAGACTAGCTTGCAA+GGG	0.614014	8_3:+28500692	Msa1285020:CDS
GGTGCATTCCTTAACGCCGG+TGG	0.616845	8_3:+28498784	Msa1285020:CDS
GCGGAGTTAGAAAATTGAAA+CGG	0.624795	8_3:+28498728	Msa1285020:CDS
TATATCCTGGCATGTCACCT+GGG	0.634922	8_3:+28499611	Msa1285020:CDS
ATTGGTGCATTCCTTAACGC+CGG	0.637540	8_3:+28498781	Msa1285020:CDS
GATACGATAAGGAGGTTGTG+TGG	0.637821	8_3:+28500456	Msa1285020:CDS
ATCCGAGGCCACATTCCCCA+AGG	0.644039	8_3:+28499804	Msa1285020:CDS
CTGGTAGCATCTAGGCACGT+CGG	0.649059	8_3:-28499001	None:intergenic
AATGTATCAGGTGTCACAAG+GGG	0.657222	8_3:-28500503	None:intergenic
AAGACCTTGTCCAGGAACGA+CGG	0.659585	8_3:+28500587	Msa1285020:CDS
TGATTCAGGATACGATAAGG+AGG	0.659737	8_3:+28500448	Msa1285020:CDS
ATATACTCGATACAAATGCA+TGG	0.660398	8_3:-28499593	None:intergenic
TAATGTATCAGGTGTCACAA+GGG	0.664692	8_3:-28500504	None:intergenic
TAAGGAATTGTATAAGCACA+AGG	0.671654	8_3:+28500779	Msa1285020:three_prime_UTR
CGTTACTAGCTATAAAATCG+AGG	0.681105	8_3:+28500610	Msa1285020:CDS
TTAGTAGAAGCTATGACACA+TGG	0.683511	8_3:+28498964	Msa1285020:CDS
CTGGGCAGTTAACAGACATG+AGG	0.699064	8_3:+28499629	Msa1285020:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGAATGATTAATAATTAAAA+AGG	-	chr8_3:28499149-28499168	None:intergenic	10.0%
!!	TGAATGATTAATAATTAAAA+AGG	-	chr8_3:28499149-28499168	None:intergenic	10.0%
!!!	TATTGTTATTATTCTTAGTA+TGG	+	chr8_3:28499032-28499051	Msa1285020:intron	15.0%
!!!	AATTTTTTAATTGTGGTATT+AGG	+	chr8_3:28500806-28500825	Msa1285020:three_prime_UTR	15.0%
!!!	ATTTATTTATCACATGTTTT+TGG	+	chr8_3:28500859-28500878	Msa1285020:three_prime_UTR	15.0%
!!!	TATTGTTATTATTCTTAGTA+TGG	+	chr8_3:28499032-28499051	Msa1285020:intron	15.0%
!!!	AATTTTTTAATTGTGGTATT+AGG	+	chr8_3:28500806-28500825	Msa1285020:three_prime_UTR	15.0%
!!!	ATTTATTTATCACATGTTTT+TGG	+	chr8_3:28500859-28500878	Msa1285020:three_prime_UTR	15.0%
!!!	ATTAATTATGTTTTCCTCTT+AGG	+	chr8_3:28499183-28499202	Msa1285020:intron	20.0%
!!!	TTAATTATGTTTTCCTCTTA+GGG	+	chr8_3:28499184-28499203	Msa1285020:intron	20.0%
!!	ATTTATATGAGTATATCTAC+TGG	+	chr8_3:28499220-28499239	Msa1285020:intron	20.0%
!!!	TTAAGTTGTTTATCTAAATG+TGG	+	chr8_3:28499460-28499479	Msa1285020:intron	20.0%
!!	AATTGAATATAATCACATGT+CGG	-	chr8_3:28500146-28500165	None:intergenic	20.0%
!!!	CCTTAGTATAATTCATTTTT+TGG	-	chr8_3:28500565-28500584	None:intergenic	20.0%
!!	CCAAAAAATGAATTATACTA+AGG	+	chr8_3:28500562-28500581	Msa1285020:CDS	20.0%
!!!	AGGATGTAATTTTTTAATTG+TGG	+	chr8_3:28500799-28500818	Msa1285020:three_prime_UTR	20.0%
!!!	ATTAATTATGTTTTCCTCTT+AGG	+	chr8_3:28499183-28499202	Msa1285020:intron	20.0%
!!!	TTAATTATGTTTTCCTCTTA+GGG	+	chr8_3:28499184-28499203	Msa1285020:intron	20.0%
!!	ATTTATATGAGTATATCTAC+TGG	+	chr8_3:28499220-28499239	Msa1285020:intron	20.0%
!!!	TTAAGTTGTTTATCTAAATG+TGG	+	chr8_3:28499460-28499479	Msa1285020:intron	20.0%
!!	AATTGAATATAATCACATGT+CGG	-	chr8_3:28500146-28500165	None:intergenic	20.0%
!!!	CCTTAGTATAATTCATTTTT+TGG	-	chr8_3:28500565-28500584	None:intergenic	20.0%
!!	CCAAAAAATGAATTATACTA+AGG	+	chr8_3:28500562-28500581	Msa1285020:CDS	20.0%
!!!	AGGATGTAATTTTTTAATTG+TGG	+	chr8_3:28500799-28500818	Msa1285020:three_prime_UTR	20.0%
!!	TTAGAAGAGACAATTTTCAA+TGG	+	chr8_3:28498688-28498707	Msa1285020:CDS	25.0%
!!	TAGAAGAGACAATTTTCAAT+GGG	+	chr8_3:28498689-28498708	Msa1285020:CDS	25.0%
!!!	TACATTTTTTCAAGTCTTGA+TGG	+	chr8_3:28499122-28499141	Msa1285020:intron	25.0%
!	AAACATAAGTAACACGAAAA+AGG	-	chr8_3:28499486-28499505	None:intergenic	25.0%
!	TGTAGAGATGTAAATGTTAT+TGG	+	chr8_3:28500294-28500313	Msa1285020:intron	25.0%
!	AGTTCATTTAATTCTCTACT+CGG	-	chr8_3:28500539-28500558	None:intergenic	25.0%
!!	ACATAACTTGTGTATATCTA+AGG	+	chr8_3:28500761-28500780	Msa1285020:three_prime_UTR	25.0%
!!	TTAGAAGAGACAATTTTCAA+TGG	+	chr8_3:28498688-28498707	Msa1285020:CDS	25.0%
!!	TAGAAGAGACAATTTTCAAT+GGG	+	chr8_3:28498689-28498708	Msa1285020:CDS	25.0%
!!!	TACATTTTTTCAAGTCTTGA+TGG	+	chr8_3:28499122-28499141	Msa1285020:intron	25.0%
!	AAACATAAGTAACACGAAAA+AGG	-	chr8_3:28499486-28499505	None:intergenic	25.0%
!	TGTAGAGATGTAAATGTTAT+TGG	+	chr8_3:28500294-28500313	Msa1285020:intron	25.0%
!	AGTTCATTTAATTCTCTACT+CGG	-	chr8_3:28500539-28500558	None:intergenic	25.0%
!!	ACATAACTTGTGTATATCTA+AGG	+	chr8_3:28500761-28500780	Msa1285020:three_prime_UTR	25.0%
!!	TTGTTGTTTATGGATTGGAT+TGG	+	chr8_3:28498820-28498839	Msa1285020:CDS	30.0%
!!	TGTTGTTTATGGATTGGATT+GGG	+	chr8_3:28498821-28498840	Msa1285020:CDS	30.0%
	TTAATATCAATCCCTATGAG+AGG	+	chr8_3:28498857-28498876	Msa1285020:CDS	30.0%
	TCTGACATTAACTAGATTGT+CGG	-	chr8_3:28498899-28498918	None:intergenic	30.0%
	TAATAACAATAGTACGTACC+TGG	-	chr8_3:28499023-28499042	None:intergenic	30.0%
	AGATTGTTTATGAGAGCTTA+TGG	+	chr8_3:28499257-28499276	Msa1285020:intron	30.0%
	TATGGAAACAACTTATGACA+TGG	+	chr8_3:28499275-28499294	Msa1285020:intron	30.0%
	ATATACTCGATACAAATGCA+TGG	-	chr8_3:28499596-28499615	None:intergenic	30.0%
	CTTATGCAATTCAACCTTAA+TGG	-	chr8_3:28499692-28499711	None:intergenic	30.0%
	ACTACGCTTGATAAATTTGA+CGG	+	chr8_3:28499754-28499773	Msa1285020:CDS	30.0%
!!	ATTTTGACAAACTAACCTTG+GGG	-	chr8_3:28499822-28499841	None:intergenic	30.0%
!!	GATTTTGACAAACTAACCTT+GGG	-	chr8_3:28499823-28499842	None:intergenic	30.0%
!!	AGATTTTGACAAACTAACCT+TGG	-	chr8_3:28499824-28499843	None:intergenic	30.0%
	CTAAGGATGCACAAAATTTA+AGG	-	chr8_3:28499932-28499951	None:intergenic	30.0%
!	TTAGTTTGATCTGTGCTATT+TGG	+	chr8_3:28500013-28500032	Msa1285020:intron	30.0%
	TATGAGTACCTAAACTTTAC+TGG	+	chr8_3:28500062-28500081	Msa1285020:intron	30.0%
!!!	ATAGCTTTGCCTACTTTTTT+AGG	+	chr8_3:28500246-28500265	Msa1285020:intron	30.0%
!!!	TAGCTTTGCCTACTTTTTTA+GGG	+	chr8_3:28500247-28500266	Msa1285020:intron	30.0%
	ACTAATGACCCTAAAAAAGT+AGG	-	chr8_3:28500258-28500277	None:intergenic	30.0%
	AACAGTTTCTACATTCTAGT+TGG	-	chr8_3:28500349-28500368	None:intergenic	30.0%
	CTATAAAATCGAGGTAATTG+CGG	+	chr8_3:28500619-28500638	Msa1285020:CDS	30.0%
	TTGTGTTTACTTCAATTGCA+AGG	-	chr8_3:28500729-28500748	None:intergenic	30.0%
	TAAGGAATTGTATAAGCACA+AGG	+	chr8_3:28500779-28500798	Msa1285020:three_prime_UTR	30.0%
	ATCAAAAATGCGTTCACAAT+TGG	+	chr8_3:28500897-28500916	Msa1285020:three_prime_UTR	30.0%
!!	TTGTTGTTTATGGATTGGAT+TGG	+	chr8_3:28498820-28498839	Msa1285020:CDS	30.0%
!!	TGTTGTTTATGGATTGGATT+GGG	+	chr8_3:28498821-28498840	Msa1285020:CDS	30.0%
	TTAATATCAATCCCTATGAG+AGG	+	chr8_3:28498857-28498876	Msa1285020:CDS	30.0%
	TCTGACATTAACTAGATTGT+CGG	-	chr8_3:28498899-28498918	None:intergenic	30.0%
	TAATAACAATAGTACGTACC+TGG	-	chr8_3:28499023-28499042	None:intergenic	30.0%
	AGATTGTTTATGAGAGCTTA+TGG	+	chr8_3:28499257-28499276	Msa1285020:intron	30.0%
	TATGGAAACAACTTATGACA+TGG	+	chr8_3:28499275-28499294	Msa1285020:intron	30.0%
	ATATACTCGATACAAATGCA+TGG	-	chr8_3:28499596-28499615	None:intergenic	30.0%
	CTTATGCAATTCAACCTTAA+TGG	-	chr8_3:28499692-28499711	None:intergenic	30.0%
	ACTACGCTTGATAAATTTGA+CGG	+	chr8_3:28499754-28499773	Msa1285020:CDS	30.0%
!!	ATTTTGACAAACTAACCTTG+GGG	-	chr8_3:28499822-28499841	None:intergenic	30.0%
!!	GATTTTGACAAACTAACCTT+GGG	-	chr8_3:28499823-28499842	None:intergenic	30.0%
!!	AGATTTTGACAAACTAACCT+TGG	-	chr8_3:28499824-28499843	None:intergenic	30.0%
	CTAAGGATGCACAAAATTTA+AGG	-	chr8_3:28499932-28499951	None:intergenic	30.0%
!	TTAGTTTGATCTGTGCTATT+TGG	+	chr8_3:28500013-28500032	Msa1285020:intron	30.0%
	TATGAGTACCTAAACTTTAC+TGG	+	chr8_3:28500062-28500081	Msa1285020:intron	30.0%
!!!	ATAGCTTTGCCTACTTTTTT+AGG	+	chr8_3:28500246-28500265	Msa1285020:intron	30.0%
!!!	TAGCTTTGCCTACTTTTTTA+GGG	+	chr8_3:28500247-28500266	Msa1285020:intron	30.0%
	ACTAATGACCCTAAAAAAGT+AGG	-	chr8_3:28500258-28500277	None:intergenic	30.0%
	AACAGTTTCTACATTCTAGT+TGG	-	chr8_3:28500349-28500368	None:intergenic	30.0%
	CTATAAAATCGAGGTAATTG+CGG	+	chr8_3:28500619-28500638	Msa1285020:CDS	30.0%
	TTGTGTTTACTTCAATTGCA+AGG	-	chr8_3:28500729-28500748	None:intergenic	30.0%
	TAAGGAATTGTATAAGCACA+AGG	+	chr8_3:28500779-28500798	Msa1285020:three_prime_UTR	30.0%
	ATCAAAAATGCGTTCACAAT+TGG	+	chr8_3:28500897-28500916	Msa1285020:three_prime_UTR	30.0%
	GGGAGAAAAATATATACTCG+CGG	+	chr8_3:28498709-28498728	Msa1285020:CDS	35.0%
	GCGGAGTTAGAAAATTGAAA+CGG	+	chr8_3:28498728-28498747	Msa1285020:CDS	35.0%
!!	CTGCATTGTTGTTTATGGAT+TGG	+	chr8_3:28498815-28498834	Msa1285020:CDS	35.0%
	CTGACATTAACTAGATTGTC+GGG	-	chr8_3:28498898-28498917	None:intergenic	35.0%
	CCTGAACGAATACTTCAATA+GGG	-	chr8_3:28498932-28498951	None:intergenic	35.0%
!	CCTATTGAAGTATTCGTTCA+GGG	+	chr8_3:28498930-28498949	Msa1285020:CDS	35.0%
	TTAGTAGAAGCTATGACACA+TGG	+	chr8_3:28498964-28498983	Msa1285020:CDS	35.0%
	CTTATTTGCATAATCTCTCC+AGG	+	chr8_3:28499315-28499334	Msa1285020:intron	35.0%
	CATTTGTATCGAGTATATCC+TGG	+	chr8_3:28499598-28499617	Msa1285020:CDS	35.0%
	TTATGCAATGTCTGCCATTA+AGG	+	chr8_3:28499675-28499694	Msa1285020:CDS	35.0%
!!!	AGTCTTCATCAAGTTTTGGA+TGG	+	chr8_3:28499779-28499798	Msa1285020:CDS	35.0%
!!!	GTCTTCATCAAGTTTTGGAT+GGG	+	chr8_3:28499780-28499799	Msa1285020:CDS	35.0%
	TGTAACACTACTTCAAAGTG+AGG	+	chr8_3:28499875-28499894	Msa1285020:intron	35.0%
!!	TTGATCTGTGCTATTTGGTA+TGG	+	chr8_3:28500018-28500037	Msa1285020:intron	35.0%
	TTTGATCACAATCACAGAAC+CGG	-	chr8_3:28500089-28500108	None:intergenic	35.0%
!	ATATCTGTGTTGGTGTTTCA+TGG	+	chr8_3:28500217-28500236	Msa1285020:intron	35.0%
	ACAATAGGAACGTTCTTCAT+TGG	-	chr8_3:28500378-28500397	None:intergenic	35.0%
!!	GGTGCTATATTTGTTGATTC+AGG	+	chr8_3:28500434-28500453	Msa1285020:CDS	35.0%
!!	TGTTGATTCAGGATACGATA+AGG	+	chr8_3:28500445-28500464	Msa1285020:CDS	35.0%
!	TAATGTATCAGGTGTCACAA+GGG	-	chr8_3:28500507-28500526	None:intergenic	35.0%
!	TTAATGTATCAGGTGTCACA+AGG	-	chr8_3:28500508-28500527	None:intergenic	35.0%
	GGATTGATCGTTAATGTATC+AGG	-	chr8_3:28500518-28500537	None:intergenic	35.0%
	CGTTACTAGCTATAAAATCG+AGG	+	chr8_3:28500610-28500629	Msa1285020:CDS	35.0%
	ATTCATCAGTTCGAGTACAA+AGG	+	chr8_3:28500650-28500669	Msa1285020:CDS	35.0%
!	TCTTTTGGCAGTTTTCTTGT+CGG	-	chr8_3:28500681-28500700	None:intergenic	35.0%
	GGGAGAAAAATATATACTCG+CGG	+	chr8_3:28498709-28498728	Msa1285020:CDS	35.0%
	GCGGAGTTAGAAAATTGAAA+CGG	+	chr8_3:28498728-28498747	Msa1285020:CDS	35.0%
!!	CTGCATTGTTGTTTATGGAT+TGG	+	chr8_3:28498815-28498834	Msa1285020:CDS	35.0%
	CTGACATTAACTAGATTGTC+GGG	-	chr8_3:28498898-28498917	None:intergenic	35.0%
	CCTGAACGAATACTTCAATA+GGG	-	chr8_3:28498932-28498951	None:intergenic	35.0%
!	CCTATTGAAGTATTCGTTCA+GGG	+	chr8_3:28498930-28498949	Msa1285020:CDS	35.0%
	TTAGTAGAAGCTATGACACA+TGG	+	chr8_3:28498964-28498983	Msa1285020:CDS	35.0%
	CTTATTTGCATAATCTCTCC+AGG	+	chr8_3:28499315-28499334	Msa1285020:intron	35.0%
	CATTTGTATCGAGTATATCC+TGG	+	chr8_3:28499598-28499617	Msa1285020:CDS	35.0%
	TTATGCAATGTCTGCCATTA+AGG	+	chr8_3:28499675-28499694	Msa1285020:CDS	35.0%
!!!	AGTCTTCATCAAGTTTTGGA+TGG	+	chr8_3:28499779-28499798	Msa1285020:CDS	35.0%
!!!	GTCTTCATCAAGTTTTGGAT+GGG	+	chr8_3:28499780-28499799	Msa1285020:CDS	35.0%
	TGTAACACTACTTCAAAGTG+AGG	+	chr8_3:28499875-28499894	Msa1285020:intron	35.0%
!!	TTGATCTGTGCTATTTGGTA+TGG	+	chr8_3:28500018-28500037	Msa1285020:intron	35.0%
	TTTGATCACAATCACAGAAC+CGG	-	chr8_3:28500089-28500108	None:intergenic	35.0%
!	ATATCTGTGTTGGTGTTTCA+TGG	+	chr8_3:28500217-28500236	Msa1285020:intron	35.0%
	ACAATAGGAACGTTCTTCAT+TGG	-	chr8_3:28500378-28500397	None:intergenic	35.0%
!!	GGTGCTATATTTGTTGATTC+AGG	+	chr8_3:28500434-28500453	Msa1285020:CDS	35.0%
!!	TGTTGATTCAGGATACGATA+AGG	+	chr8_3:28500445-28500464	Msa1285020:CDS	35.0%
!	TAATGTATCAGGTGTCACAA+GGG	-	chr8_3:28500507-28500526	None:intergenic	35.0%
!	TTAATGTATCAGGTGTCACA+AGG	-	chr8_3:28500508-28500527	None:intergenic	35.0%
	GGATTGATCGTTAATGTATC+AGG	-	chr8_3:28500518-28500537	None:intergenic	35.0%
	CGTTACTAGCTATAAAATCG+AGG	+	chr8_3:28500610-28500629	Msa1285020:CDS	35.0%
	ATTCATCAGTTCGAGTACAA+AGG	+	chr8_3:28500650-28500669	Msa1285020:CDS	35.0%
!	TCTTTTGGCAGTTTTCTTGT+CGG	-	chr8_3:28500681-28500700	None:intergenic	35.0%
	ATCATTCCTGGAGCTAAATC+AGG	+	chr8_3:28498655-28498674	Msa1285020:CDS	40.0%
!	AAACTTCCTGATTTAGCTCC+AGG	-	chr8_3:28498664-28498683	None:intergenic	40.0%
!	GATGTTGTCGAAGCACTAAT+TGG	+	chr8_3:28498763-28498782	Msa1285020:CDS	40.0%
!!	GATGGCTGCATTGTTGTTTA+TGG	+	chr8_3:28498810-28498829	Msa1285020:CDS	40.0%
	GCAATGAATTGCCTCTCATA+GGG	-	chr8_3:28498871-28498890	None:intergenic	40.0%
	AGCAATGAATTGCCTCTCAT+AGG	-	chr8_3:28498872-28498891	None:intergenic	40.0%
!	CCCTATTGAAGTATTCGTTC+AGG	+	chr8_3:28498929-28498948	Msa1285020:CDS	40.0%
	CCCTGAACGAATACTTCAAT+AGG	-	chr8_3:28498933-28498952	None:intergenic	40.0%
!	TTTTCCTCTTAGGGTCAGTT+TGG	+	chr8_3:28499193-28499212	Msa1285020:intron	40.0%
	ACTTGAATACTTGGGAGACT+CGG	+	chr8_3:28499552-28499571	Msa1285020:CDS	40.0%
!	GGTCAGTCTTCATCAAGTTT+TGG	+	chr8_3:28499775-28499794	Msa1285020:CDS	40.0%
	ACCGCTAAGACATGAACAAA+CGG	+	chr8_3:28499962-28499981	Msa1285020:intron	40.0%
	TCCGTTTGTTCATGTCTTAG+CGG	-	chr8_3:28499966-28499985	None:intergenic	40.0%
	GTACCTAAACTTTACTGGTC+CGG	+	chr8_3:28500067-28500086	Msa1285020:intron	40.0%
	TCTGGTGTTCATATCTGTGT+TGG	+	chr8_3:28500207-28500226	Msa1285020:intron	40.0%
	AGAACGTTCCTATTGTTTGC+AGG	+	chr8_3:28500382-28500401	Msa1285020:intron	40.0%
	TCCTATTGTTTGCAGGTACT+TGG	+	chr8_3:28500389-28500408	Msa1285020:intron	40.0%
	TCCAAGTACCTGCAAACAAT+AGG	-	chr8_3:28500393-28500412	None:intergenic	40.0%
	TGATTCAGGATACGATAAGG+AGG	+	chr8_3:28500448-28500467	Msa1285020:CDS	40.0%
!	AGGTTGTGTGGAAAAGCATA+AGG	+	chr8_3:28500468-28500487	Msa1285020:CDS	40.0%
!	AATGTATCAGGTGTCACAAG+GGG	-	chr8_3:28500506-28500525	None:intergenic	40.0%
	AAAATCGAGGTAATTGCGGA+TGG	+	chr8_3:28500623-28500642	Msa1285020:CDS	40.0%
	AAATCGAGGTAATTGCGGAT+GGG	+	chr8_3:28500624-28500643	Msa1285020:CDS	40.0%
	ATCATTCCTGGAGCTAAATC+AGG	+	chr8_3:28498655-28498674	Msa1285020:CDS	40.0%
!	AAACTTCCTGATTTAGCTCC+AGG	-	chr8_3:28498664-28498683	None:intergenic	40.0%
!	GATGTTGTCGAAGCACTAAT+TGG	+	chr8_3:28498763-28498782	Msa1285020:CDS	40.0%
!!	GATGGCTGCATTGTTGTTTA+TGG	+	chr8_3:28498810-28498829	Msa1285020:CDS	40.0%
	GCAATGAATTGCCTCTCATA+GGG	-	chr8_3:28498871-28498890	None:intergenic	40.0%
	AGCAATGAATTGCCTCTCAT+AGG	-	chr8_3:28498872-28498891	None:intergenic	40.0%
!	CCCTATTGAAGTATTCGTTC+AGG	+	chr8_3:28498929-28498948	Msa1285020:CDS	40.0%
	CCCTGAACGAATACTTCAAT+AGG	-	chr8_3:28498933-28498952	None:intergenic	40.0%
!	TTTTCCTCTTAGGGTCAGTT+TGG	+	chr8_3:28499193-28499212	Msa1285020:intron	40.0%
	ACTTGAATACTTGGGAGACT+CGG	+	chr8_3:28499552-28499571	Msa1285020:CDS	40.0%
!	GGTCAGTCTTCATCAAGTTT+TGG	+	chr8_3:28499775-28499794	Msa1285020:CDS	40.0%
	ACCGCTAAGACATGAACAAA+CGG	+	chr8_3:28499962-28499981	Msa1285020:intron	40.0%
	TCCGTTTGTTCATGTCTTAG+CGG	-	chr8_3:28499966-28499985	None:intergenic	40.0%
	GTACCTAAACTTTACTGGTC+CGG	+	chr8_3:28500067-28500086	Msa1285020:intron	40.0%
	TCTGGTGTTCATATCTGTGT+TGG	+	chr8_3:28500207-28500226	Msa1285020:intron	40.0%
	AGAACGTTCCTATTGTTTGC+AGG	+	chr8_3:28500382-28500401	Msa1285020:intron	40.0%
	TCCTATTGTTTGCAGGTACT+TGG	+	chr8_3:28500389-28500408	Msa1285020:intron	40.0%
	TCCAAGTACCTGCAAACAAT+AGG	-	chr8_3:28500393-28500412	None:intergenic	40.0%
	TGATTCAGGATACGATAAGG+AGG	+	chr8_3:28500448-28500467	Msa1285020:CDS	40.0%
!	AGGTTGTGTGGAAAAGCATA+AGG	+	chr8_3:28500468-28500487	Msa1285020:CDS	40.0%
!	AATGTATCAGGTGTCACAAG+GGG	-	chr8_3:28500506-28500525	None:intergenic	40.0%
	AAAATCGAGGTAATTGCGGA+TGG	+	chr8_3:28500623-28500642	Msa1285020:CDS	40.0%
	AAATCGAGGTAATTGCGGAT+GGG	+	chr8_3:28500624-28500643	Msa1285020:CDS	40.0%
	TCCAGGTCTTCGGATCAAAA+GGG	-	chr8_3:28498636-28498655	None:intergenic	45.0%
	ATCCAGGTCTTCGGATCAAA+AGG	-	chr8_3:28498637-28498656	None:intergenic	45.0%
!	TTTAGCTCCAGGAATGATCC+AGG	-	chr8_3:28498653-28498672	None:intergenic	45.0%
	ATTGGTGCATTCCTTAACGC+CGG	+	chr8_3:28498781-28498800	Msa1285020:CDS	45.0%
	CAATCCAAACTGACCCTAAG+AGG	-	chr8_3:28499200-28499219	None:intergenic	45.0%
!	GCTGCTTTCATAAGCTATCC+TGG	-	chr8_3:28499336-28499355	None:intergenic	45.0%
	ATTCAAGTCGCTGCAGGAAA+AGG	-	chr8_3:28499540-28499559	None:intergenic	45.0%
	CTGCAGCGACTTGAATACTT+GGG	+	chr8_3:28499544-28499563	Msa1285020:intron	45.0%
	TATATCCTGGCATGTCACCT+GGG	+	chr8_3:28499611-28499630	Msa1285020:CDS	45.0%
	AACAGACATGAGGTCTGCAT+CGG	+	chr8_3:28499639-28499658	Msa1285020:CDS	45.0%
	GTAGCTCTTGAGAGTCATGA+AGG	-	chr8_3:28499720-28499739	None:intergenic	45.0%
!!!	AAGTTTTGGATGGGAATCCG+AGG	+	chr8_3:28499789-28499808	Msa1285020:CDS	45.0%
	CAAACTAACCTTGGGGAATG+TGG	-	chr8_3:28499815-28499834	None:intergenic	45.0%
	GTTTGTTCATGTCTTAGCGG+TGG	-	chr8_3:28499963-28499982	None:intergenic	45.0%
	GAACCGGACCAGTAAAGTTT+AGG	-	chr8_3:28500073-28500092	None:intergenic	45.0%
	CGATGTGTTTGTGTACTGTC+TGG	+	chr8_3:28500189-28500208	Msa1285020:intron	45.0%
	GACATCATAGAGTCTCTAGC+TGG	+	chr8_3:28500413-28500432	Msa1285020:CDS	45.0%
	GATACGATAAGGAGGTTGTG+TGG	+	chr8_3:28500456-28500475	Msa1285020:CDS	45.0%
!!	GAAAAGCATAAGGCCGCTTT+TGG	+	chr8_3:28500478-28500497	Msa1285020:CDS	45.0%
	AATCGAGGTAATTGCGGATG+GGG	+	chr8_3:28500625-28500644	Msa1285020:CDS	45.0%
!!	TGCCAAAAGACTAGCTTGCA+AGG	+	chr8_3:28500691-28500710	Msa1285020:CDS	45.0%
!!	GCCAAAAGACTAGCTTGCAA+GGG	+	chr8_3:28500692-28500711	Msa1285020:CDS	45.0%
!!!	TCCCTTGCAAGCTAGTCTTT+TGG	-	chr8_3:28500696-28500715	None:intergenic	45.0%
	TCCAGGTCTTCGGATCAAAA+GGG	-	chr8_3:28498636-28498655	None:intergenic	45.0%
	ATCCAGGTCTTCGGATCAAA+AGG	-	chr8_3:28498637-28498656	None:intergenic	45.0%
!	TTTAGCTCCAGGAATGATCC+AGG	-	chr8_3:28498653-28498672	None:intergenic	45.0%
	ATTGGTGCATTCCTTAACGC+CGG	+	chr8_3:28498781-28498800	Msa1285020:CDS	45.0%
	CAATCCAAACTGACCCTAAG+AGG	-	chr8_3:28499200-28499219	None:intergenic	45.0%
!	GCTGCTTTCATAAGCTATCC+TGG	-	chr8_3:28499336-28499355	None:intergenic	45.0%
	ATTCAAGTCGCTGCAGGAAA+AGG	-	chr8_3:28499540-28499559	None:intergenic	45.0%
	CTGCAGCGACTTGAATACTT+GGG	+	chr8_3:28499544-28499563	Msa1285020:intron	45.0%
	TATATCCTGGCATGTCACCT+GGG	+	chr8_3:28499611-28499630	Msa1285020:CDS	45.0%
	AACAGACATGAGGTCTGCAT+CGG	+	chr8_3:28499639-28499658	Msa1285020:CDS	45.0%
	GTAGCTCTTGAGAGTCATGA+AGG	-	chr8_3:28499720-28499739	None:intergenic	45.0%
!!!	AAGTTTTGGATGGGAATCCG+AGG	+	chr8_3:28499789-28499808	Msa1285020:CDS	45.0%
	CAAACTAACCTTGGGGAATG+TGG	-	chr8_3:28499815-28499834	None:intergenic	45.0%
	GTTTGTTCATGTCTTAGCGG+TGG	-	chr8_3:28499963-28499982	None:intergenic	45.0%
	GAACCGGACCAGTAAAGTTT+AGG	-	chr8_3:28500073-28500092	None:intergenic	45.0%
	CGATGTGTTTGTGTACTGTC+TGG	+	chr8_3:28500189-28500208	Msa1285020:intron	45.0%
	GACATCATAGAGTCTCTAGC+TGG	+	chr8_3:28500413-28500432	Msa1285020:CDS	45.0%
	GATACGATAAGGAGGTTGTG+TGG	+	chr8_3:28500456-28500475	Msa1285020:CDS	45.0%
!!	GAAAAGCATAAGGCCGCTTT+TGG	+	chr8_3:28500478-28500497	Msa1285020:CDS	45.0%
	AATCGAGGTAATTGCGGATG+GGG	+	chr8_3:28500625-28500644	Msa1285020:CDS	45.0%
!!	TGCCAAAAGACTAGCTTGCA+AGG	+	chr8_3:28500691-28500710	Msa1285020:CDS	45.0%
!!	GCCAAAAGACTAGCTTGCAA+GGG	+	chr8_3:28500692-28500711	Msa1285020:CDS	45.0%
!!!	TCCCTTGCAAGCTAGTCTTT+TGG	-	chr8_3:28500696-28500715	None:intergenic	45.0%
!!!	TTAAACTTAATTTAAATTTT+CGG	-	chr8_3:28500931-28500950	None:intergenic	5.0%
!!!	TTAAACTTAATTTAAATTTT+CGG	-	chr8_3:28500931-28500950	None:intergenic	5.0%
	CTGAGTTGCAGGGCTTCATA+CGG	+	chr8_3:28498605-28498624	Msa1285020:CDS	50.0%
!	ACCCTTTTGATCCGAAGACC+TGG	+	chr8_3:28498632-28498651	Msa1285020:CDS	50.0%
	CCAGGAATGATCCAGGTCTT+CGG	-	chr8_3:28498646-28498665	None:intergenic	50.0%
	GTACGTACCTGGTAGCATCT+AGG	-	chr8_3:28499012-28499031	None:intergenic	50.0%
	CCAAGTATTCAAGTCGCTGC+AGG	-	chr8_3:28499546-28499565	None:intergenic	50.0%
	CCTGCAGCGACTTGAATACT+TGG	+	chr8_3:28499543-28499562	Msa1285020:intron	50.0%
	GTATATCCTGGCATGTCACC+TGG	+	chr8_3:28499610-28499629	Msa1285020:CDS	50.0%
	CTCATGTCTGTTAACTGCCC+AGG	-	chr8_3:28499631-28499650	None:intergenic	50.0%
	CTGGGCAGTTAACAGACATG+AGG	+	chr8_3:28499629-28499648	Msa1285020:CDS	50.0%
	CTAAGGAGAAGACCTTGTCC+AGG	+	chr8_3:28500579-28500598	Msa1285020:CDS	50.0%
	AAGACCTTGTCCAGGAACGA+CGG	+	chr8_3:28500587-28500606	Msa1285020:CDS	50.0%
	CTGAGTTGCAGGGCTTCATA+CGG	+	chr8_3:28498605-28498624	Msa1285020:CDS	50.0%
!	ACCCTTTTGATCCGAAGACC+TGG	+	chr8_3:28498632-28498651	Msa1285020:CDS	50.0%
	CCAGGAATGATCCAGGTCTT+CGG	-	chr8_3:28498646-28498665	None:intergenic	50.0%
	GTACGTACCTGGTAGCATCT+AGG	-	chr8_3:28499012-28499031	None:intergenic	50.0%
	CCAAGTATTCAAGTCGCTGC+AGG	-	chr8_3:28499546-28499565	None:intergenic	50.0%
	CCTGCAGCGACTTGAATACT+TGG	+	chr8_3:28499543-28499562	Msa1285020:intron	50.0%
	GTATATCCTGGCATGTCACC+TGG	+	chr8_3:28499610-28499629	Msa1285020:CDS	50.0%
	CTCATGTCTGTTAACTGCCC+AGG	-	chr8_3:28499631-28499650	None:intergenic	50.0%
	CTGGGCAGTTAACAGACATG+AGG	+	chr8_3:28499629-28499648	Msa1285020:CDS	50.0%
	CTAAGGAGAAGACCTTGTCC+AGG	+	chr8_3:28500579-28500598	Msa1285020:CDS	50.0%
	AAGACCTTGTCCAGGAACGA+CGG	+	chr8_3:28500587-28500606	Msa1285020:CDS	50.0%
	CCGAAGACCTGGATCATTCC+TGG	+	chr8_3:28498643-28498662	Msa1285020:CDS	55.0%
	CAATGCAGCCATCTCACCAC+CGG	-	chr8_3:28498803-28498822	None:intergenic	55.0%
	TGGTAGCATCTAGGCACGTC+GGG	-	chr8_3:28499003-28499022	None:intergenic	55.0%
	CTGGTAGCATCTAGGCACGT+CGG	-	chr8_3:28499004-28499023	None:intergenic	55.0%
!!	ATACTTGGGAGACTCGGTGC+TGG	+	chr8_3:28499558-28499577	Msa1285020:CDS	55.0%
	AACCTTGGGGAATGTGGCCT+CGG	-	chr8_3:28499809-28499828	None:intergenic	55.0%
	TAGCGGTGGCAGCTTCTCTA+AGG	-	chr8_3:28499949-28499968	None:intergenic	55.0%
	GTCACAAGGGGCTCCAAAAG+CGG	-	chr8_3:28500494-28500513	None:intergenic	55.0%
	CCGAAGACCTGGATCATTCC+TGG	+	chr8_3:28498643-28498662	Msa1285020:CDS	55.0%
	CAATGCAGCCATCTCACCAC+CGG	-	chr8_3:28498803-28498822	None:intergenic	55.0%
	TGGTAGCATCTAGGCACGTC+GGG	-	chr8_3:28499003-28499022	None:intergenic	55.0%
	CTGGTAGCATCTAGGCACGT+CGG	-	chr8_3:28499004-28499023	None:intergenic	55.0%
!!	ATACTTGGGAGACTCGGTGC+TGG	+	chr8_3:28499558-28499577	Msa1285020:CDS	55.0%
	AACCTTGGGGAATGTGGCCT+CGG	-	chr8_3:28499809-28499828	None:intergenic	55.0%
	TAGCGGTGGCAGCTTCTCTA+AGG	-	chr8_3:28499949-28499968	None:intergenic	55.0%
	GTCACAAGGGGCTCCAAAAG+CGG	-	chr8_3:28500494-28500513	None:intergenic	55.0%
	GGTGCATTCCTTAACGCCGG+TGG	+	chr8_3:28498784-28498803	Msa1285020:CDS	60.0%
	CCATCTCACCACCGGCGTTA+AGG	-	chr8_3:28498795-28498814	None:intergenic	60.0%
	CCTTAACGCCGGTGGTGAGA+TGG	+	chr8_3:28498792-28498811	Msa1285020:CDS	60.0%
	CGACGTGCCTAGATGCTACC+AGG	+	chr8_3:28499002-28499021	Msa1285020:CDS	60.0%
	AACTGCCCAGGTGACATGCC+AGG	-	chr8_3:28499619-28499638	None:intergenic	60.0%
	ATCCGAGGCCACATTCCCCA+AGG	+	chr8_3:28499804-28499823	Msa1285020:CDS	60.0%
	AACGCCGTCGTTCCTGGACA+AGG	-	chr8_3:28500594-28500613	None:intergenic	60.0%
	GCTAGTAACGCCGTCGTTCC+TGG	-	chr8_3:28500600-28500619	None:intergenic	60.0%
	GGTGCATTCCTTAACGCCGG+TGG	+	chr8_3:28498784-28498803	Msa1285020:CDS	60.0%
	CCATCTCACCACCGGCGTTA+AGG	-	chr8_3:28498795-28498814	None:intergenic	60.0%
	CCTTAACGCCGGTGGTGAGA+TGG	+	chr8_3:28498792-28498811	Msa1285020:CDS	60.0%
	CGACGTGCCTAGATGCTACC+AGG	+	chr8_3:28499002-28499021	Msa1285020:CDS	60.0%
	AACTGCCCAGGTGACATGCC+AGG	-	chr8_3:28499619-28499638	None:intergenic	60.0%
	ATCCGAGGCCACATTCCCCA+AGG	+	chr8_3:28499804-28499823	Msa1285020:CDS	60.0%
	AACGCCGTCGTTCCTGGACA+AGG	-	chr8_3:28500594-28500613	None:intergenic	60.0%
	GCTAGTAACGCCGTCGTTCC+TGG	-	chr8_3:28500600-28500619	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_3	gene	28498604	28500963	28498604	ID=Msa1285020;Name=Msa1285020
chr8_3	mRNA	28498604	28500963	28498604	ID=Msa1285020-mRNA-1;Parent=Msa1285020;Name=Msa1285020-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0\|1\|0.66\|1\|1\|0.66\|3\|221\|344
chr8_3	exon	28498604	28499023	28498604	ID=Msa1285020-mRNA-1:exon:9586;Parent=Msa1285020-mRNA-1
chr8_3	exon	28499550	28499825	28499550	ID=Msa1285020-mRNA-1:exon:9587;Parent=Msa1285020-mRNA-1
chr8_3	exon	28500404	28500963	28500404	ID=Msa1285020-mRNA-1:exon:9588;Parent=Msa1285020-mRNA-1
chr8_3	CDS	28498604	28499023	28498604	ID=Msa1285020-mRNA-1:cds;Parent=Msa1285020-mRNA-1
chr8_3	CDS	28499550	28499825	28499550	ID=Msa1285020-mRNA-1:cds;Parent=Msa1285020-mRNA-1
chr8_3	CDS	28500404	28500742	28500404	ID=Msa1285020-mRNA-1:cds;Parent=Msa1285020-mRNA-1
chr8_3	three_prime_UTR	28500743	28500963	28500743	ID=Msa1285020-mRNA-1:three_prime_utr;Parent=Msa1285020-mRNA-1

Gene Sequence

>Msa1285020

TCTGAGTTGCAGGGCTTCATACGGAATGACCCTTTTGATCCGAAGACCTGGATCATTCCTGGAGCTAAATCAGGAAGTTTTAAATTAGAAGAGACAATTTTCAATGGGAGAAAAATATATACTCGCGGAGTTAGAAAATTGAAACGGAAAGTTGTTGCTGATGTTGTCGAAGCACTAATTGGTGCATTCCTTAACGCCGGTGGTGAGATGGCTGCATTGTTGTTTATGGATTGGATTGGGATCAAAGTGAATTTTAATATCAATCCCTATGAGAGGCAATTCATTGCTTGTCCCGACAATCTAGTTAATGTCAGAATTCTAGAATCCCTATTGAAGTATTCGTTCAGGGATCGTTCTCTATTAGTAGAAGCTATGACACATGGCTCTTACATGCTTCCCGACGTGCCTAGATGCTACCAGCGACTTGAATACTTGGGAGACTCGGTGCTGGACTATCTCATTACCATGCATTTGTATCGAGTATATCCTGGCATGTCACCTGGGCAGTTAACAGACATGAGGTCTGCATCGGTGAATAATGACTGTTATGCAATGTCTGCCATTAAGGTTGAATTGCATAAGCATGTCCTTCATGACTCTCAAGAGCTACATAAACATATTGTAACTACGCTTGATAAATTTGACGGTCAGTCTTCATCAAGTTTTGGATGGGAATCCGAGGCCACATTCCCCAAGGTACTTGGAGACATCATAGAGTCTCTAGCTGGTGCTATATTTGTTGATTCAGGATACGATAAGGAGGTTGTGTGGAAAAGCATAAGGCCGCTTTTGGAGCCCCTTGTGACACCTGATACATTAACGATCAATCCGAGTAGAGAATTAAATGAACTGTGCCAAAAAATGAATTATACTAAGGAGAAGACCTTGTCCAGGAACGACGGCGTTACTAGCTATAAAATCGAGGTAATTGCGGATGGGGTAATTCATCAGTTCGAGTACAAAGGTTCTACCGACAAGAAAACTGCCAAAAGACTAGCTTGCAAGGGAGTTTTGCATTCCTTGCAATTGAAGTAA

Protein sequence

>Msa1285020

SELQGFIRNDPFDPKTWIIPGAKSGSFKLEETIFNGRKIYTRGVRKLKRKVVADVVEALIGAFLNAGGEMAALLFMDWIGIKVNFNINPYERQFIACPDNLVNVRILESLLKYSFRDRSLLVEAMTHGSYMLPDVPRCYQRLEYLGDSVLDYLITMHLYRVYPGMSPGQLTDMRSASVNNDCYAMSAIKVELHKHVLHDSQELHKHIVTTLDKFDGQSSSSFGWESEATFPKVLGDIIESLAGAIFVDSGYDKEVVWKSIRPLLEPLVTPDTLTINPSRELNELCQKMNYTKEKTLSRNDGVTSYKIEVIADGVIHQFEYKGSTDKKTAKRLACKGVLHSLQLK*