Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1285660 | sp|F4JT76|VPS54_ARATH | 66.667 | 264 | 74 | 3 | 55 | 317 | 75 | 325 | 1.40e-106 | 337 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1285660 | A0A072V8X8 | 93.443 | 305 | 8 | 1 | 13 | 317 | 14 | 306 | 0.0 | 568 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1285660 | Msa1401370 | 0.829345 | 5.423520e-55 | -8.615850e-47 |
| Msa1015670 | Msa1285660 | 0.836623 | 8.393662e-57 | -8.615850e-47 |
| Msa1044150 | Msa1285660 | 0.829268 | 5.660860e-55 | -8.615850e-47 |
| Msa1101010 | Msa1285660 | 0.800436 | 1.442566e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1285660 | MtrunA17_Chr2g0303321 | 93.443 | 305 | 8 | 1 | 13 | 317 | 14 | 306 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1285660 | AT4G19490.1 | 66.667 | 264 | 74 | 3 | 55 | 317 | 75 | 325 | 1.42e-107 | 337 |
| Msa1285660 | AT4G19490.2 | 66.667 | 264 | 74 | 3 | 55 | 317 | 75 | 325 | 1.42e-107 | 337 |
Find 92 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGATTGTTGAAGAGTCTT+TGG | 0.260294 | 8_3:+31248955 | None:intergenic |
| GGAGGAGATAGGGGTGAATT+CGG | 0.274597 | 8_3:+31248880 | None:intergenic |
| AATAAAATAACATGGAAAAT+TGG | 0.288034 | 8_3:-31249141 | None:intergenic |
| TGAGGATTGAGGAGAGAGAT+TGG | 0.289732 | 8_3:+31248936 | None:intergenic |
| GGTGAGTTGCAGGATCTTAA+TGG | 0.294745 | 8_3:-31248500 | Msa1285660:CDS |
| GTGGATTTGGTGGAGGAGAT+AGG | 0.304954 | 8_3:+31248869 | None:intergenic |
| CAAGCACTCTGCTCTCAAAT+TGG | 0.335588 | 8_3:-31248314 | Msa1285660:CDS |
| GGTGAGAGTGGAGGTGGATT+TGG | 0.344556 | 8_3:+31248856 | None:intergenic |
| GAGAGGGTTGTTGAGGATTG+AGG | 0.348384 | 8_3:+31248925 | None:intergenic |
| GAGGAGATAGGGGTGAATTC+GGG | 0.352076 | 8_3:+31248881 | None:intergenic |
| GAAAGATGGGGAAGAGGTTG+AGG | 0.360050 | 8_3:+31248979 | None:intergenic |
| AGGCAGATTCAGTTGCTTAA+TGG | 0.363866 | 8_3:-31248395 | Msa1285660:CDS |
| TGATGATTTGCAACATTTGC+TGG | 0.374859 | 8_3:-31247582 | Msa1285660:intron |
| TAGGCTTATTGATTCCGATT+TGG | 0.402889 | 8_3:-31248429 | Msa1285660:CDS |
| TGAAGCGCAGGGTGAGTTGC+AGG | 0.405088 | 8_3:-31248510 | Msa1285660:CDS |
| GTTGCATCTGCAGATTGTGC+TGG | 0.409563 | 8_3:-31247620 | Msa1285660:CDS |
| TGGATTTGGTGGAGGAGATA+GGG | 0.415628 | 8_3:+31248870 | None:intergenic |
| TCTCACTGTTAGCGTGTTTG+CGG | 0.418786 | 8_3:+31248771 | None:intergenic |
| TGCAGATTGTGCTGGAGCAC+TGG | 0.426005 | 8_3:-31247612 | Msa1285660:CDS |
| CCTCGCAGACTCAGCCAAAT+CGG | 0.427922 | 8_3:+31248415 | None:intergenic |
| GAAGAGTCTTTGGAGAAAGA+TGG | 0.429531 | 8_3:+31248965 | None:intergenic |
| AAGAGTCTTTGGAGAAAGAT+GGG | 0.435461 | 8_3:+31248966 | None:intergenic |
| ATACACAATCTTGATAGATC+TGG | 0.443263 | 8_3:+31246748 | None:intergenic |
| GTCGTCGTTCTTTGAAGCGC+AGG | 0.445581 | 8_3:-31248522 | Msa1285660:CDS |
| TGGAGGTTGTGCGGTTGAGA+TGG | 0.449751 | 8_3:+31249008 | None:intergenic |
| GGAGGTTGTGCGGTTGAGAT+GGG | 0.452498 | 8_3:+31249009 | None:intergenic |
| GTGAGTTGCAGGATCTTAAT+GGG | 0.454099 | 8_3:-31248499 | Msa1285660:CDS |
| GAGAGTGGAGGTGGATTTGG+TGG | 0.459358 | 8_3:+31248859 | None:intergenic |
| ACACGCGACGAGTGCTTCTC+CGG | 0.464490 | 8_3:+31248721 | None:intergenic |
| GTGAATTGAAGGATACGGTT+AGG | 0.471624 | 8_3:-31248448 | Msa1285660:CDS |
| GAGATTGTGGTGGAAGAGAG+AGG | 0.473676 | 8_3:+31248908 | None:intergenic |
| ATCTCCGACGACGGCGGTGC+CGG | 0.474716 | 8_3:-31248740 | Msa1285660:CDS |
| GATAGGGGTGAATTCGGGAG+AGG | 0.482041 | 8_3:+31248886 | None:intergenic |
| TTTGGAGAAAGATGGGGAAG+AGG | 0.482432 | 8_3:+31248973 | None:intergenic |
| GCTTTATAGAATCCATAAAC+AGG | 0.486410 | 8_3:-31246788 | Msa1285660:CDS |
| GGTATAAAGTTAACAAAGTG+AGG | 0.487349 | 8_3:-31249120 | Msa1285660:CDS |
| AGAGAGATAAGGAAGGAAAT+CGG | 0.490199 | 8_3:+31248829 | None:intergenic |
| TGGTACAAGGACGAATTTGT+TGG | 0.502601 | 8_3:-31248375 | Msa1285660:CDS |
| TGTGCGGTTGAGATGGGTGG+TGG | 0.503482 | 8_3:+31249015 | None:intergenic |
| TGGCGCTTCAGCAGAAACTT+AGG | 0.506431 | 8_3:-31248355 | Msa1285660:CDS |
| TTCTCCGGCACCGCCGTCGT+CGG | 0.507390 | 8_3:+31248736 | None:intergenic |
| ATAAGGAAGGAAATCGGATC+GGG | 0.511146 | 8_3:+31248835 | None:intergenic |
| TGGAAGAGAGAGGGTTGTTG+AGG | 0.511415 | 8_3:+31248918 | None:intergenic |
| GTTGAGATGGGTGGTGGAGA+AGG | 0.512795 | 8_3:+31249021 | None:intergenic |
| GGATTTGGTGGAGGAGATAG+GGG | 0.513847 | 8_3:+31248871 | None:intergenic |
| TTCAGTTGCTTAATGGTACA+AGG | 0.523416 | 8_3:-31248388 | Msa1285660:CDS |
| TATAAAGTTAACAAAGTGAG+GGG | 0.527393 | 8_3:-31249118 | Msa1285660:CDS |
| AGTGGAGGTGGATTTGGTGG+AGG | 0.527638 | 8_3:+31248862 | None:intergenic |
| TCGGAGAGGGAAGAGAGATA+AGG | 0.528602 | 8_3:+31248818 | None:intergenic |
| GTCGAAGCGGTGGAAGGGAT+CGG | 0.531095 | 8_3:+31248799 | None:intergenic |
| TGCAAGGATTCGTGAATTGA+AGG | 0.533510 | 8_3:-31248459 | Msa1285660:CDS |
| GAATTCGGGAGAGGAGATTG+TGG | 0.533724 | 8_3:+31248895 | None:intergenic |
| GCGGTGGAAGGGATCGGAGA+GGG | 0.537140 | 8_3:+31248805 | None:intergenic |
| CTGTCACATGATCTCTAAGA+TGG | 0.537362 | 8_3:+31246811 | None:intergenic |
| CAAGACTTTCATCTCGAAGA+AGG | 0.539643 | 8_3:-31248668 | Msa1285660:CDS |
| GGATCGGGTGAGAGTGGAGG+TGG | 0.545880 | 8_3:+31248850 | None:intergenic |
| GGTTGTGCGGTTGAGATGGG+TGG | 0.547848 | 8_3:+31249012 | None:intergenic |
| AGATTGTGGTGGAAGAGAGA+GGG | 0.548036 | 8_3:+31248909 | None:intergenic |
| CATCTTAGAGATCATGTGAC+AGG | 0.553915 | 8_3:-31246810 | Msa1285660:CDS |
| AGATGGGTGGTGGAGAAGGT+CGG | 0.556172 | 8_3:+31249025 | None:intergenic |
| GGAAGAGGTTGAGGAAGATG+TGG | 0.558283 | 8_3:+31248988 | None:intergenic |
| GATTCGTGAATTGAAGGATA+CGG | 0.558974 | 8_3:-31248453 | Msa1285660:CDS |
| TCGTCGTTCTTTGAAGCGCA+GGG | 0.562342 | 8_3:-31248521 | Msa1285660:CDS |
| AGAGGTTGAGGAAGATGTGG+AGG | 0.563931 | 8_3:+31248991 | None:intergenic |
| GAAATCGGATCGGGTGAGAG+TGG | 0.566399 | 8_3:+31248844 | None:intergenic |
| AGAGTCTTTGGAGAAAGATG+GGG | 0.570679 | 8_3:+31248967 | None:intergenic |
| GATTTCGTCGAAGCGGTGGA+AGG | 0.572538 | 8_3:+31248793 | None:intergenic |
| AGAGGGAAGAGAGATAAGGA+AGG | 0.576714 | 8_3:+31248822 | None:intergenic |
| GTATAAAGTTAACAAAGTGA+GGG | 0.579573 | 8_3:-31249119 | Msa1285660:CDS |
| TAGGATGGAGACGAGCTCAC+TGG | 0.580944 | 8_3:-31246849 | Msa1285660:CDS |
| TGCGGATTTCGTCGAAGCGG+TGG | 0.583150 | 8_3:+31248789 | None:intergenic |
| GATAAGGAAGGAAATCGGAT+CGG | 0.590702 | 8_3:+31248834 | None:intergenic |
| ATTTCGTCGAAGCGGTGGAA+GGG | 0.591536 | 8_3:+31248794 | None:intergenic |
| TTCGGGAGAGGAGATTGTGG+TGG | 0.598720 | 8_3:+31248898 | None:intergenic |
| AGGAAGATGTGGAGGTTGTG+CGG | 0.607105 | 8_3:+31248999 | None:intergenic |
| AGTAAAGAGACGGAACTTCA+CGG | 0.611291 | 8_3:+31248696 | None:intergenic |
| GCTTTCGCAGTATCTTGATG+TGG | 0.613686 | 8_3:-31248582 | Msa1285660:CDS |
| ATCGGATCGGGTGAGAGTGG+AGG | 0.617240 | 8_3:+31248847 | None:intergenic |
| ATCTCAACTATCTCCGACGA+CGG | 0.618040 | 8_3:-31248749 | Msa1285660:CDS |
| CTTAATGGGAAGATCGTGGA+AGG | 0.629428 | 8_3:-31248485 | Msa1285660:CDS |
| TCTTGTTTGAAGTAAAGAGA+CGG | 0.634756 | 8_3:+31248686 | None:intergenic |
| TTCTCAGCAAAAGTCGAGAA+CGG | 0.635404 | 8_3:+31248623 | None:intergenic |
| CCGATTTGGCTGAGTCTGCG+AGG | 0.649646 | 8_3:-31248415 | Msa1285660:CDS |
| AGATCGTGGAAGGATGTGCA+AGG | 0.650412 | 8_3:-31248475 | Msa1285660:CDS |
| GGATCTTAATGGGAAGATCG+TGG | 0.650732 | 8_3:-31248489 | Msa1285660:CDS |
| GGTTGAGCTTCATCTTGTGA+AGG | 0.675760 | 8_3:-31248561 | Msa1285660:CDS |
| TCAACTATCTCCGACGACGG+CGG | 0.678809 | 8_3:-31248746 | Msa1285660:CDS |
| GTTTGCGGATTTCGTCGAAG+CGG | 0.684356 | 8_3:+31248786 | None:intergenic |
| AGCGGTGGAAGGGATCGGAG+AGG | 0.687799 | 8_3:+31248804 | None:intergenic |
| AGAAGGCGCTACGTTCCGCG+CGG | 0.702777 | 8_3:-31248651 | Msa1285660:CDS |
| ATAAAGTTAACAAAGTGAGG+GGG | 0.704558 | 8_3:-31249117 | Msa1285660:intron |
| TCGAGAACGGACACGCCGCG+CGG | 0.738685 | 8_3:+31248636 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAATAAAGGAAACAT+AGG | + | chr8_3:31248161-31248180 | None:intergenic | 15.0% |
| !! | AAAAACGACTAAAATAATAA+AGG | + | chr8_3:31248170-31248189 | None:intergenic | 15.0% |
| !! | CAAAATATATCAACTTAAAA+TGG | + | chr8_3:31248216-31248235 | None:intergenic | 15.0% |
| !!! | TTTTGAACTGAATAAAATTT+AGG | + | chr8_3:31248524-31248543 | None:intergenic | 15.0% |
| !! | TAAAATAATAAAGGAAACAT+AGG | + | chr8_3:31248161-31248180 | None:intergenic | 15.0% |
| !! | AAAAACGACTAAAATAATAA+AGG | + | chr8_3:31248170-31248189 | None:intergenic | 15.0% |
| !! | CAAAATATATCAACTTAAAA+TGG | + | chr8_3:31248216-31248235 | None:intergenic | 15.0% |
| !!! | TTTTGAACTGAATAAAATTT+AGG | + | chr8_3:31248524-31248543 | None:intergenic | 15.0% |
| !! | AAACTCAAAATCTAAAAATG+AGG | + | chr8_3:31247645-31247664 | None:intergenic | 20.0% |
| !! | AATAATGTTATTGAGAATTG+CGG | - | chr8_3:31247736-31247755 | Msa1285660:intron | 20.0% |
| !!! | TTTATTTTGAATCGTTGTAA+TGG | - | chr8_3:31247949-31247968 | Msa1285660:intron | 20.0% |
| !! | TAATGAATTATTGAGATTTG+TGG | - | chr8_3:31248016-31248035 | Msa1285660:intron | 20.0% |
| !! | AATGAATTATTGAGATTTGT+GGG | - | chr8_3:31248017-31248036 | Msa1285660:intron | 20.0% |
| !! | AATTAATCAATTTATGCAAC+AGG | - | chr8_3:31248094-31248113 | Msa1285660:intron | 20.0% |
| !! | TCAAAGCAATTATAATTGTA+GGG | + | chr8_3:31248595-31248614 | None:intergenic | 20.0% |
| !! | TTCAAAGCAATTATAATTGT+AGG | + | chr8_3:31248596-31248615 | None:intergenic | 20.0% |
| !! | TAAATATATCGTGATCAATA+TGG | + | chr8_3:31248659-31248678 | None:intergenic | 20.0% |
| !! | TATATTTACTTTGTGATATG+CGG | - | chr8_3:31248671-31248690 | Msa1285660:CDS | 20.0% |
| !! | AAACTCAAAATCTAAAAATG+AGG | + | chr8_3:31247645-31247664 | None:intergenic | 20.0% |
| !! | AATAATGTTATTGAGAATTG+CGG | - | chr8_3:31247736-31247755 | Msa1285660:intron | 20.0% |
| !!! | TTTATTTTGAATCGTTGTAA+TGG | - | chr8_3:31247949-31247968 | Msa1285660:intron | 20.0% |
| !! | TAATGAATTATTGAGATTTG+TGG | - | chr8_3:31248016-31248035 | Msa1285660:intron | 20.0% |
| !! | AATGAATTATTGAGATTTGT+GGG | - | chr8_3:31248017-31248036 | Msa1285660:intron | 20.0% |
| !! | AATTAATCAATTTATGCAAC+AGG | - | chr8_3:31248094-31248113 | Msa1285660:intron | 20.0% |
| !! | TCAAAGCAATTATAATTGTA+GGG | + | chr8_3:31248595-31248614 | None:intergenic | 20.0% |
| !! | TTCAAAGCAATTATAATTGT+AGG | + | chr8_3:31248596-31248615 | None:intergenic | 20.0% |
| !! | TAAATATATCGTGATCAATA+TGG | + | chr8_3:31248659-31248678 | None:intergenic | 20.0% |
| !! | TATATTTACTTTGTGATATG+CGG | - | chr8_3:31248671-31248690 | Msa1285660:CDS | 20.0% |
| ! | GTATAAAGTTAACAAAGTGA+GGG | - | chr8_3:31246751-31246770 | Msa1285660:CDS | 25.0% |
| ! | TATAAAGTTAACAAAGTGAG+GGG | - | chr8_3:31246752-31246771 | Msa1285660:CDS | 25.0% |
| ! | ATGAATTATTGAGATTTGTG+GGG | - | chr8_3:31248018-31248037 | Msa1285660:intron | 25.0% |
| !! | AAACTATTTGCAGTTTTCTT+TGG | - | chr8_3:31248041-31248060 | Msa1285660:intron | 25.0% |
| !! | AACTATTTGCAGTTTTCTTT+GGG | - | chr8_3:31248042-31248061 | Msa1285660:intron | 25.0% |
| !! | TTTTATGAATGTTTGACAAC+TGG | - | chr8_3:31248186-31248205 | Msa1285660:intron | 25.0% |
| ! | GTCAACTTAATAGAATATGA+TGG | - | chr8_3:31248478-31248497 | Msa1285660:CDS | 25.0% |
| ! | TATTCAGTTCAAAAAATCCA+AGG | - | chr8_3:31248530-31248549 | Msa1285660:CDS | 25.0% |
| ! | GGAAAATATATTCTAAGTAG+AGG | + | chr8_3:31248573-31248592 | None:intergenic | 25.0% |
| ! | CAAAGCAATTATAATTGTAG+GGG | + | chr8_3:31248594-31248613 | None:intergenic | 25.0% |
| !!! | AAGCATTGAAATTAGAAAGA+AGG | - | chr8_3:31248614-31248633 | Msa1285660:CDS | 25.0% |
| ! | GCACAATTCAATATTATGAT+TGG | + | chr8_3:31248831-31248850 | None:intergenic | 25.0% |
| !!! | TTTCCTTTTTAGTCTGTTAA+TGG | - | chr8_3:31248908-31248927 | Msa1285660:CDS | 25.0% |
| !!! | AGTCTATGTTTTAACATCAA+TGG | - | chr8_3:31248934-31248953 | Msa1285660:CDS | 25.0% |
| !!! | GTCTATGTTTTAACATCAAT+GGG | - | chr8_3:31248935-31248954 | Msa1285660:CDS | 25.0% |
| ! | GTATAAAGTTAACAAAGTGA+GGG | - | chr8_3:31246751-31246770 | Msa1285660:CDS | 25.0% |
| ! | TATAAAGTTAACAAAGTGAG+GGG | - | chr8_3:31246752-31246771 | Msa1285660:CDS | 25.0% |
| ! | ATGAATTATTGAGATTTGTG+GGG | - | chr8_3:31248018-31248037 | Msa1285660:intron | 25.0% |
| !! | AAACTATTTGCAGTTTTCTT+TGG | - | chr8_3:31248041-31248060 | Msa1285660:intron | 25.0% |
| !! | AACTATTTGCAGTTTTCTTT+GGG | - | chr8_3:31248042-31248061 | Msa1285660:intron | 25.0% |
| !! | TTTTATGAATGTTTGACAAC+TGG | - | chr8_3:31248186-31248205 | Msa1285660:intron | 25.0% |
| ! | GTCAACTTAATAGAATATGA+TGG | - | chr8_3:31248478-31248497 | Msa1285660:CDS | 25.0% |
| ! | TATTCAGTTCAAAAAATCCA+AGG | - | chr8_3:31248530-31248549 | Msa1285660:CDS | 25.0% |
| ! | GGAAAATATATTCTAAGTAG+AGG | + | chr8_3:31248573-31248592 | None:intergenic | 25.0% |
| ! | CAAAGCAATTATAATTGTAG+GGG | + | chr8_3:31248594-31248613 | None:intergenic | 25.0% |
| !!! | AAGCATTGAAATTAGAAAGA+AGG | - | chr8_3:31248614-31248633 | Msa1285660:CDS | 25.0% |
| ! | GCACAATTCAATATTATGAT+TGG | + | chr8_3:31248831-31248850 | None:intergenic | 25.0% |
| !!! | TTTCCTTTTTAGTCTGTTAA+TGG | - | chr8_3:31248908-31248927 | Msa1285660:CDS | 25.0% |
| !!! | AGTCTATGTTTTAACATCAA+TGG | - | chr8_3:31248934-31248953 | Msa1285660:CDS | 25.0% |
| !!! | GTCTATGTTTTAACATCAAT+GGG | - | chr8_3:31248935-31248954 | Msa1285660:CDS | 25.0% |
| GGTATAAAGTTAACAAAGTG+AGG | - | chr8_3:31246750-31246769 | Msa1285660:CDS | 30.0% | |
| ATAAAGTTAACAAAGTGAGG+GGG | - | chr8_3:31246753-31246772 | Msa1285660:CDS | 30.0% | |
| ! | TCTTGTTTGAAGTAAAGAGA+CGG | + | chr8_3:31247187-31247206 | None:intergenic | 30.0% |
| TCAGTAATTGTTATCAGTGT+TGG | + | chr8_3:31247774-31247793 | None:intergenic | 30.0% | |
| CTGTTAGCTAGTGAATAATT+CGG | - | chr8_3:31247906-31247925 | Msa1285660:intron | 30.0% | |
| GGTTTCTTCGAAAATTAGTA+TGG | - | chr8_3:31248115-31248134 | Msa1285660:intron | 30.0% | |
| ATCGTGATCAATATGGATAA+TGG | + | chr8_3:31248652-31248671 | None:intergenic | 30.0% | |
| TCAGTGATTATGCAAAGAAA+AGG | + | chr8_3:31248714-31248733 | None:intergenic | 30.0% | |
| AACAGACTAAAAAGGAAACT+AGG | + | chr8_3:31248906-31248925 | None:intergenic | 30.0% | |
| CTTATTGTTTCCTGTAACTT+TGG | - | chr8_3:31248998-31249017 | Msa1285660:CDS | 30.0% | |
| GCTTTATAGAATCCATAAAC+AGG | - | chr8_3:31249082-31249101 | Msa1285660:intron | 30.0% | |
| ! | AAAAAAGGTGTACCTGTTTA+TGG | + | chr8_3:31249097-31249116 | None:intergenic | 30.0% |
| ATAGATCTGGACATCAAAAA+AGG | + | chr8_3:31249112-31249131 | None:intergenic | 30.0% | |
| ATACACAATCTTGATAGATC+TGG | + | chr8_3:31249125-31249144 | None:intergenic | 30.0% | |
| GGTATAAAGTTAACAAAGTG+AGG | - | chr8_3:31246750-31246769 | Msa1285660:CDS | 30.0% | |
| ATAAAGTTAACAAAGTGAGG+GGG | - | chr8_3:31246753-31246772 | Msa1285660:CDS | 30.0% | |
| ! | TCTTGTTTGAAGTAAAGAGA+CGG | + | chr8_3:31247187-31247206 | None:intergenic | 30.0% |
| TCAGTAATTGTTATCAGTGT+TGG | + | chr8_3:31247774-31247793 | None:intergenic | 30.0% | |
| CTGTTAGCTAGTGAATAATT+CGG | - | chr8_3:31247906-31247925 | Msa1285660:intron | 30.0% | |
| GGTTTCTTCGAAAATTAGTA+TGG | - | chr8_3:31248115-31248134 | Msa1285660:intron | 30.0% | |
| ATCGTGATCAATATGGATAA+TGG | + | chr8_3:31248652-31248671 | None:intergenic | 30.0% | |
| TCAGTGATTATGCAAAGAAA+AGG | + | chr8_3:31248714-31248733 | None:intergenic | 30.0% | |
| AACAGACTAAAAAGGAAACT+AGG | + | chr8_3:31248906-31248925 | None:intergenic | 30.0% | |
| CTTATTGTTTCCTGTAACTT+TGG | - | chr8_3:31248998-31249017 | Msa1285660:CDS | 30.0% | |
| GCTTTATAGAATCCATAAAC+AGG | - | chr8_3:31249082-31249101 | Msa1285660:intron | 30.0% | |
| ! | AAAAAAGGTGTACCTGTTTA+TGG | + | chr8_3:31249097-31249116 | None:intergenic | 30.0% |
| ATAGATCTGGACATCAAAAA+AGG | + | chr8_3:31249112-31249131 | None:intergenic | 30.0% | |
| ATACACAATCTTGATAGATC+TGG | + | chr8_3:31249125-31249144 | None:intergenic | 30.0% | |
| ! | AAGAGTCTTTGGAGAAAGAT+GGG | + | chr8_3:31246907-31246926 | None:intergenic | 35.0% |
| TTGGATTGTTGAAGAGTCTT+TGG | + | chr8_3:31246918-31246937 | None:intergenic | 35.0% | |
| AGAGAGATAAGGAAGGAAAT+CGG | + | chr8_3:31247044-31247063 | None:intergenic | 35.0% | |
| GATTCGTGAATTGAAGGATA+CGG | - | chr8_3:31247417-31247436 | Msa1285660:intron | 35.0% | |
| !! | TAGGCTTATTGATTCCGATT+TGG | - | chr8_3:31247441-31247460 | Msa1285660:intron | 35.0% |
| TTCAGTTGCTTAATGGTACA+AGG | - | chr8_3:31247482-31247501 | Msa1285660:intron | 35.0% | |
| !!! | GATTTTAGAGTGAAGTGTTC+AGG | - | chr8_3:31247681-31247700 | Msa1285660:intron | 35.0% |
| ACGTAATCACACATTTGTGT+CGG | - | chr8_3:31247809-31247828 | Msa1285660:intron | 35.0% | |
| !! | CCTTCGATTAGAAGTACTAT+CGG | - | chr8_3:31247844-31247863 | Msa1285660:intron | 35.0% |
| ! | TTTGAATCGTTGTAATGGAG+AGG | - | chr8_3:31247954-31247973 | Msa1285660:intron | 35.0% |
| ATGTGGAAGCTATACTGAAT+AGG | - | chr8_3:31247991-31248010 | Msa1285660:intron | 35.0% | |
| ! | TGATGATTTGCAACATTTGC+TGG | - | chr8_3:31248288-31248307 | Msa1285660:CDS | 35.0% |
| AATCCAAGGTACAATGTAGT+TGG | - | chr8_3:31248544-31248563 | Msa1285660:CDS | 35.0% | |
| ATACCAACTACATTGTACCT+TGG | + | chr8_3:31248550-31248569 | None:intergenic | 35.0% | |
| ATTTACTTTGTGATATGCGG+AGG | - | chr8_3:31248674-31248693 | Msa1285660:CDS | 35.0% | |
| AGCTGATATCAATCAGTGTT+TGG | - | chr8_3:31248795-31248814 | Msa1285660:CDS | 35.0% | |
| GCTGATATCAATCAGTGTTT+GGG | - | chr8_3:31248796-31248815 | Msa1285660:CDS | 35.0% | |
| GCTGTAACTTAAAAGGAAAC+TGG | + | chr8_3:31248853-31248872 | None:intergenic | 35.0% | |
| GATGTCAGCTGTAACTTAAA+AGG | + | chr8_3:31248860-31248879 | None:intergenic | 35.0% | |
| ! | GTGCCATTAACAGACTAAAA+AGG | + | chr8_3:31248914-31248933 | None:intergenic | 35.0% |
| ! | AAATTTTCTTCTCGTCCTTC+AGG | + | chr8_3:31248964-31248983 | None:intergenic | 35.0% |
| TTGTTTCCTGTAACTTTGGT+AGG | - | chr8_3:31249002-31249021 | Msa1285660:CDS | 35.0% | |
| ! | AAGAGTCTTTGGAGAAAGAT+GGG | + | chr8_3:31246907-31246926 | None:intergenic | 35.0% |
| TTGGATTGTTGAAGAGTCTT+TGG | + | chr8_3:31246918-31246937 | None:intergenic | 35.0% | |
| AGAGAGATAAGGAAGGAAAT+CGG | + | chr8_3:31247044-31247063 | None:intergenic | 35.0% | |
| GATTCGTGAATTGAAGGATA+CGG | - | chr8_3:31247417-31247436 | Msa1285660:intron | 35.0% | |
| !! | TAGGCTTATTGATTCCGATT+TGG | - | chr8_3:31247441-31247460 | Msa1285660:intron | 35.0% |
| TTCAGTTGCTTAATGGTACA+AGG | - | chr8_3:31247482-31247501 | Msa1285660:intron | 35.0% | |
| !!! | GATTTTAGAGTGAAGTGTTC+AGG | - | chr8_3:31247681-31247700 | Msa1285660:intron | 35.0% |
| ACGTAATCACACATTTGTGT+CGG | - | chr8_3:31247809-31247828 | Msa1285660:intron | 35.0% | |
| !! | CCTTCGATTAGAAGTACTAT+CGG | - | chr8_3:31247844-31247863 | Msa1285660:intron | 35.0% |
| ! | TTTGAATCGTTGTAATGGAG+AGG | - | chr8_3:31247954-31247973 | Msa1285660:intron | 35.0% |
| ATGTGGAAGCTATACTGAAT+AGG | - | chr8_3:31247991-31248010 | Msa1285660:intron | 35.0% | |
| ! | TGATGATTTGCAACATTTGC+TGG | - | chr8_3:31248288-31248307 | Msa1285660:CDS | 35.0% |
| AATCCAAGGTACAATGTAGT+TGG | - | chr8_3:31248544-31248563 | Msa1285660:CDS | 35.0% | |
| ATACCAACTACATTGTACCT+TGG | + | chr8_3:31248550-31248569 | None:intergenic | 35.0% | |
| ATTTACTTTGTGATATGCGG+AGG | - | chr8_3:31248674-31248693 | Msa1285660:CDS | 35.0% | |
| AGCTGATATCAATCAGTGTT+TGG | - | chr8_3:31248795-31248814 | Msa1285660:CDS | 35.0% | |
| GCTGATATCAATCAGTGTTT+GGG | - | chr8_3:31248796-31248815 | Msa1285660:CDS | 35.0% | |
| GCTGTAACTTAAAAGGAAAC+TGG | + | chr8_3:31248853-31248872 | None:intergenic | 35.0% | |
| GATGTCAGCTGTAACTTAAA+AGG | + | chr8_3:31248860-31248879 | None:intergenic | 35.0% | |
| ! | GTGCCATTAACAGACTAAAA+AGG | + | chr8_3:31248914-31248933 | None:intergenic | 35.0% |
| ! | AAATTTTCTTCTCGTCCTTC+AGG | + | chr8_3:31248964-31248983 | None:intergenic | 35.0% |
| TTGTTTCCTGTAACTTTGGT+AGG | - | chr8_3:31249002-31249021 | Msa1285660:CDS | 35.0% | |
| ! | AGAGTCTTTGGAGAAAGATG+GGG | + | chr8_3:31246906-31246925 | None:intergenic | 40.0% |
| ! | GAAGAGTCTTTGGAGAAAGA+TGG | + | chr8_3:31246908-31246927 | None:intergenic | 40.0% |
| ATAAGGAAGGAAATCGGATC+GGG | + | chr8_3:31247038-31247057 | None:intergenic | 40.0% | |
| GATAAGGAAGGAAATCGGAT+CGG | + | chr8_3:31247039-31247058 | None:intergenic | 40.0% | |
| AGTAAAGAGACGGAACTTCA+CGG | + | chr8_3:31247177-31247196 | None:intergenic | 40.0% | |
| CAAGACTTTCATCTCGAAGA+AGG | - | chr8_3:31247202-31247221 | Msa1285660:intron | 40.0% | |
| TTCTCAGCAAAAGTCGAGAA+CGG | + | chr8_3:31247250-31247269 | None:intergenic | 40.0% | |
| GTGAGTTGCAGGATCTTAAT+GGG | - | chr8_3:31247371-31247390 | Msa1285660:intron | 40.0% | |
| TGCAAGGATTCGTGAATTGA+AGG | - | chr8_3:31247411-31247430 | Msa1285660:intron | 40.0% | |
| GTGAATTGAAGGATACGGTT+AGG | - | chr8_3:31247422-31247441 | Msa1285660:intron | 40.0% | |
| AGGCAGATTCAGTTGCTTAA+TGG | - | chr8_3:31247475-31247494 | Msa1285660:intron | 40.0% | |
| TGGTACAAGGACGAATTTGT+TGG | - | chr8_3:31247495-31247514 | Msa1285660:intron | 40.0% | |
| CCGATAGTACTTCTAATCGA+AGG | + | chr8_3:31247847-31247866 | None:intergenic | 40.0% | |
| AGGTGTTAGTGCTGTAAATG+TGG | - | chr8_3:31247974-31247993 | Msa1285660:intron | 40.0% | |
| CGTTTGACCTATCATGACTA+GGG | - | chr8_3:31248416-31248435 | Msa1285660:CDS | 40.0% | |
| GATACATCCCTAGTCATGAT+AGG | + | chr8_3:31248426-31248445 | None:intergenic | 40.0% | |
| GATGTTACCAGATCTTATCG+TGG | - | chr8_3:31248743-31248762 | Msa1285660:CDS | 40.0% | |
| TTACCAGATCTTATCGTGGA+TGG | - | chr8_3:31248747-31248766 | Msa1285660:CDS | 40.0% | |
| TACCAGATCTTATCGTGGAT+GGG | - | chr8_3:31248748-31248767 | Msa1285660:CDS | 40.0% | |
| AACATCAATGGGATTCCTGA+AGG | - | chr8_3:31248946-31248965 | Msa1285660:CDS | 40.0% | |
| TTCCTGTAACTTTGGTAGGA+TGG | - | chr8_3:31249006-31249025 | Msa1285660:CDS | 40.0% | |
| ! | CTGTCACATGATCTCTAAGA+TGG | + | chr8_3:31249062-31249081 | None:intergenic | 40.0% |
| CATCTTAGAGATCATGTGAC+AGG | - | chr8_3:31249060-31249079 | Msa1285660:intron | 40.0% | |
| ! | AGAGTCTTTGGAGAAAGATG+GGG | + | chr8_3:31246906-31246925 | None:intergenic | 40.0% |
| ! | GAAGAGTCTTTGGAGAAAGA+TGG | + | chr8_3:31246908-31246927 | None:intergenic | 40.0% |
| ATAAGGAAGGAAATCGGATC+GGG | + | chr8_3:31247038-31247057 | None:intergenic | 40.0% | |
| GATAAGGAAGGAAATCGGAT+CGG | + | chr8_3:31247039-31247058 | None:intergenic | 40.0% | |
| AGTAAAGAGACGGAACTTCA+CGG | + | chr8_3:31247177-31247196 | None:intergenic | 40.0% | |
| CAAGACTTTCATCTCGAAGA+AGG | - | chr8_3:31247202-31247221 | Msa1285660:intron | 40.0% | |
| TTCTCAGCAAAAGTCGAGAA+CGG | + | chr8_3:31247250-31247269 | None:intergenic | 40.0% | |
| GTGAGTTGCAGGATCTTAAT+GGG | - | chr8_3:31247371-31247390 | Msa1285660:intron | 40.0% | |
| TGCAAGGATTCGTGAATTGA+AGG | - | chr8_3:31247411-31247430 | Msa1285660:intron | 40.0% | |
| GTGAATTGAAGGATACGGTT+AGG | - | chr8_3:31247422-31247441 | Msa1285660:intron | 40.0% | |
| AGGCAGATTCAGTTGCTTAA+TGG | - | chr8_3:31247475-31247494 | Msa1285660:intron | 40.0% | |
| TGGTACAAGGACGAATTTGT+TGG | - | chr8_3:31247495-31247514 | Msa1285660:intron | 40.0% | |
| CCGATAGTACTTCTAATCGA+AGG | + | chr8_3:31247847-31247866 | None:intergenic | 40.0% | |
| AGGTGTTAGTGCTGTAAATG+TGG | - | chr8_3:31247974-31247993 | Msa1285660:intron | 40.0% | |
| CGTTTGACCTATCATGACTA+GGG | - | chr8_3:31248416-31248435 | Msa1285660:CDS | 40.0% | |
| GATACATCCCTAGTCATGAT+AGG | + | chr8_3:31248426-31248445 | None:intergenic | 40.0% | |
| GATGTTACCAGATCTTATCG+TGG | - | chr8_3:31248743-31248762 | Msa1285660:CDS | 40.0% | |
| TTACCAGATCTTATCGTGGA+TGG | - | chr8_3:31248747-31248766 | Msa1285660:CDS | 40.0% | |
| TACCAGATCTTATCGTGGAT+GGG | - | chr8_3:31248748-31248767 | Msa1285660:CDS | 40.0% | |
| AACATCAATGGGATTCCTGA+AGG | - | chr8_3:31248946-31248965 | Msa1285660:CDS | 40.0% | |
| TTCCTGTAACTTTGGTAGGA+TGG | - | chr8_3:31249006-31249025 | Msa1285660:CDS | 40.0% | |
| ! | CTGTCACATGATCTCTAAGA+TGG | + | chr8_3:31249062-31249081 | None:intergenic | 40.0% |
| CATCTTAGAGATCATGTGAC+AGG | - | chr8_3:31249060-31249079 | Msa1285660:intron | 40.0% | |
| TTTGGAGAAAGATGGGGAAG+AGG | + | chr8_3:31246900-31246919 | None:intergenic | 45.0% | |
| TGAGGATTGAGGAGAGAGAT+TGG | + | chr8_3:31246937-31246956 | None:intergenic | 45.0% | |
| ! | AGATTGTGGTGGAAGAGAGA+GGG | + | chr8_3:31246964-31246983 | None:intergenic | 45.0% |
| !! | TGGATTTGGTGGAGGAGATA+GGG | + | chr8_3:31247003-31247022 | None:intergenic | 45.0% |
| AGAGGGAAGAGAGATAAGGA+AGG | + | chr8_3:31247051-31247070 | None:intergenic | 45.0% | |
| TCTCACTGTTAGCGTGTTTG+CGG | + | chr8_3:31247102-31247121 | None:intergenic | 45.0% | |
| ATCTCAACTATCTCCGACGA+CGG | - | chr8_3:31247121-31247140 | Msa1285660:intron | 45.0% | |
| GCTTTCGCAGTATCTTGATG+TGG | - | chr8_3:31247288-31247307 | Msa1285660:intron | 45.0% | |
| GGTTGAGCTTCATCTTGTGA+AGG | - | chr8_3:31247309-31247328 | Msa1285660:intron | 45.0% | |
| GGTGAGTTGCAGGATCTTAA+TGG | - | chr8_3:31247370-31247389 | Msa1285660:intron | 45.0% | |
| GGATCTTAATGGGAAGATCG+TGG | - | chr8_3:31247381-31247400 | Msa1285660:intron | 45.0% | |
| CTTAATGGGAAGATCGTGGA+AGG | - | chr8_3:31247385-31247404 | Msa1285660:intron | 45.0% | |
| CAAGCACTCTGCTCTCAAAT+TGG | - | chr8_3:31247556-31247575 | Msa1285660:intron | 45.0% | |
| GCGTTTGACCTATCATGACT+AGG | - | chr8_3:31248415-31248434 | Msa1285660:CDS | 45.0% | |
| TACCCATCCACGATAAGATC+TGG | + | chr8_3:31248753-31248772 | None:intergenic | 45.0% | |
| CTCCATCCTACCAAAGTTAC+AGG | + | chr8_3:31249011-31249030 | None:intergenic | 45.0% | |
| TTTGGAGAAAGATGGGGAAG+AGG | + | chr8_3:31246900-31246919 | None:intergenic | 45.0% | |
| TGAGGATTGAGGAGAGAGAT+TGG | + | chr8_3:31246937-31246956 | None:intergenic | 45.0% | |
| ! | AGATTGTGGTGGAAGAGAGA+GGG | + | chr8_3:31246964-31246983 | None:intergenic | 45.0% |
| !! | TGGATTTGGTGGAGGAGATA+GGG | + | chr8_3:31247003-31247022 | None:intergenic | 45.0% |
| AGAGGGAAGAGAGATAAGGA+AGG | + | chr8_3:31247051-31247070 | None:intergenic | 45.0% | |
| TCTCACTGTTAGCGTGTTTG+CGG | + | chr8_3:31247102-31247121 | None:intergenic | 45.0% | |
| ATCTCAACTATCTCCGACGA+CGG | - | chr8_3:31247121-31247140 | Msa1285660:intron | 45.0% | |
| GCTTTCGCAGTATCTTGATG+TGG | - | chr8_3:31247288-31247307 | Msa1285660:intron | 45.0% | |
| GGTTGAGCTTCATCTTGTGA+AGG | - | chr8_3:31247309-31247328 | Msa1285660:intron | 45.0% | |
| GGTGAGTTGCAGGATCTTAA+TGG | - | chr8_3:31247370-31247389 | Msa1285660:intron | 45.0% | |
| GGATCTTAATGGGAAGATCG+TGG | - | chr8_3:31247381-31247400 | Msa1285660:intron | 45.0% | |
| CTTAATGGGAAGATCGTGGA+AGG | - | chr8_3:31247385-31247404 | Msa1285660:intron | 45.0% | |
| CAAGCACTCTGCTCTCAAAT+TGG | - | chr8_3:31247556-31247575 | Msa1285660:intron | 45.0% | |
| GCGTTTGACCTATCATGACT+AGG | - | chr8_3:31248415-31248434 | Msa1285660:CDS | 45.0% | |
| TACCCATCCACGATAAGATC+TGG | + | chr8_3:31248753-31248772 | None:intergenic | 45.0% | |
| CTCCATCCTACCAAAGTTAC+AGG | + | chr8_3:31249011-31249030 | None:intergenic | 45.0% | |
| TGCTTCTCAACAACCGTCGT+GGG | - | chr8_3:31246814-31246833 | Msa1285660:CDS | 50.0% | |
| AGGAAGATGTGGAGGTTGTG+CGG | + | chr8_3:31246874-31246893 | None:intergenic | 50.0% | |
| AGAGGTTGAGGAAGATGTGG+AGG | + | chr8_3:31246882-31246901 | None:intergenic | 50.0% | |
| GGAAGAGGTTGAGGAAGATG+TGG | + | chr8_3:31246885-31246904 | None:intergenic | 50.0% | |
| GAAAGATGGGGAAGAGGTTG+AGG | + | chr8_3:31246894-31246913 | None:intergenic | 50.0% | |
| GAGAGGGTTGTTGAGGATTG+AGG | + | chr8_3:31246948-31246967 | None:intergenic | 50.0% | |
| TGGAAGAGAGAGGGTTGTTG+AGG | + | chr8_3:31246955-31246974 | None:intergenic | 50.0% | |
| ! | GAGATTGTGGTGGAAGAGAG+AGG | + | chr8_3:31246965-31246984 | None:intergenic | 50.0% |
| GAATTCGGGAGAGGAGATTG+TGG | + | chr8_3:31246978-31246997 | None:intergenic | 50.0% | |
| GAGGAGATAGGGGTGAATTC+GGG | + | chr8_3:31246992-31247011 | None:intergenic | 50.0% | |
| GGAGGAGATAGGGGTGAATT+CGG | + | chr8_3:31246993-31247012 | None:intergenic | 50.0% | |
| !! | GGATTTGGTGGAGGAGATAG+GGG | + | chr8_3:31247002-31247021 | None:intergenic | 50.0% |
| !! | GTGGATTTGGTGGAGGAGAT+AGG | + | chr8_3:31247004-31247023 | None:intergenic | 50.0% |
| TCGGAGAGGGAAGAGAGATA+AGG | + | chr8_3:31247055-31247074 | None:intergenic | 50.0% | |
| ATTTCGTCGAAGCGGTGGAA+GGG | + | chr8_3:31247079-31247098 | None:intergenic | 50.0% | |
| GTTTGCGGATTTCGTCGAAG+CGG | + | chr8_3:31247087-31247106 | None:intergenic | 50.0% | |
| ! | CTCGACTTTTGCTGAGAACG+CGG | - | chr8_3:31247252-31247271 | Msa1285660:intron | 50.0% |
| !! | TCGTCGTTCTTTGAAGCGCA+GGG | - | chr8_3:31247349-31247368 | Msa1285660:intron | 50.0% |
| AGATCGTGGAAGGATGTGCA+AGG | - | chr8_3:31247395-31247414 | Msa1285660:intron | 50.0% | |
| TGGCGCTTCAGCAGAAACTT+AGG | - | chr8_3:31247515-31247534 | Msa1285660:intron | 50.0% | |
| CACACATTTGTGTCGGACTC+TGG | - | chr8_3:31247816-31247835 | Msa1285660:intron | 50.0% | |
| GTTGCATCTGCAGATTGTGC+TGG | - | chr8_3:31248250-31248269 | Msa1285660:intron | 50.0% | |
| TGCTTCTCAACAACCGTCGT+GGG | - | chr8_3:31246814-31246833 | Msa1285660:CDS | 50.0% | |
| AGGAAGATGTGGAGGTTGTG+CGG | + | chr8_3:31246874-31246893 | None:intergenic | 50.0% | |
| AGAGGTTGAGGAAGATGTGG+AGG | + | chr8_3:31246882-31246901 | None:intergenic | 50.0% | |
| GGAAGAGGTTGAGGAAGATG+TGG | + | chr8_3:31246885-31246904 | None:intergenic | 50.0% | |
| GAAAGATGGGGAAGAGGTTG+AGG | + | chr8_3:31246894-31246913 | None:intergenic | 50.0% | |
| GAGAGGGTTGTTGAGGATTG+AGG | + | chr8_3:31246948-31246967 | None:intergenic | 50.0% | |
| TGGAAGAGAGAGGGTTGTTG+AGG | + | chr8_3:31246955-31246974 | None:intergenic | 50.0% | |
| ! | GAGATTGTGGTGGAAGAGAG+AGG | + | chr8_3:31246965-31246984 | None:intergenic | 50.0% |
| GAATTCGGGAGAGGAGATTG+TGG | + | chr8_3:31246978-31246997 | None:intergenic | 50.0% | |
| GAGGAGATAGGGGTGAATTC+GGG | + | chr8_3:31246992-31247011 | None:intergenic | 50.0% | |
| GGAGGAGATAGGGGTGAATT+CGG | + | chr8_3:31246993-31247012 | None:intergenic | 50.0% | |
| !! | GGATTTGGTGGAGGAGATAG+GGG | + | chr8_3:31247002-31247021 | None:intergenic | 50.0% |
| !! | GTGGATTTGGTGGAGGAGAT+AGG | + | chr8_3:31247004-31247023 | None:intergenic | 50.0% |
| TCGGAGAGGGAAGAGAGATA+AGG | + | chr8_3:31247055-31247074 | None:intergenic | 50.0% | |
| ATTTCGTCGAAGCGGTGGAA+GGG | + | chr8_3:31247079-31247098 | None:intergenic | 50.0% | |
| GTTTGCGGATTTCGTCGAAG+CGG | + | chr8_3:31247087-31247106 | None:intergenic | 50.0% | |
| ! | CTCGACTTTTGCTGAGAACG+CGG | - | chr8_3:31247252-31247271 | Msa1285660:intron | 50.0% |
| !! | TCGTCGTTCTTTGAAGCGCA+GGG | - | chr8_3:31247349-31247368 | Msa1285660:intron | 50.0% |
| AGATCGTGGAAGGATGTGCA+AGG | - | chr8_3:31247395-31247414 | Msa1285660:intron | 50.0% | |
| TGGCGCTTCAGCAGAAACTT+AGG | - | chr8_3:31247515-31247534 | Msa1285660:intron | 50.0% | |
| CACACATTTGTGTCGGACTC+TGG | - | chr8_3:31247816-31247835 | Msa1285660:intron | 50.0% | |
| GTTGCATCTGCAGATTGTGC+TGG | - | chr8_3:31248250-31248269 | Msa1285660:intron | 50.0% | |
| GGGGTTCACTTGAATCCCCT+GGG | - | chr8_3:31246772-31246791 | Msa1285660:CDS | 55.0% | |
| TGAATCCCCTGGGTGTAACG+TGG | - | chr8_3:31246782-31246801 | Msa1285660:CDS | 55.0% | |
| CGGTTGTTGAGAAGCAGTGG+CGG | + | chr8_3:31246810-31246829 | None:intergenic | 55.0% | |
| CGACGGTTGTTGAGAAGCAG+TGG | + | chr8_3:31246813-31246832 | None:intergenic | 55.0% | |
| CTGCTTCTCAACAACCGTCG+TGG | - | chr8_3:31246813-31246832 | Msa1285660:CDS | 55.0% | |
| GCTTCTCAACAACCGTCGTG+GGG | - | chr8_3:31246815-31246834 | Msa1285660:CDS | 55.0% | |
| !! | AGATGGGTGGTGGAGAAGGT+CGG | + | chr8_3:31246848-31246867 | None:intergenic | 55.0% |
| !! | GTTGAGATGGGTGGTGGAGA+AGG | + | chr8_3:31246852-31246871 | None:intergenic | 55.0% |
| GGAGGTTGTGCGGTTGAGAT+GGG | + | chr8_3:31246864-31246883 | None:intergenic | 55.0% | |
| TGGAGGTTGTGCGGTTGAGA+TGG | + | chr8_3:31246865-31246884 | None:intergenic | 55.0% | |
| TTCGGGAGAGGAGATTGTGG+TGG | + | chr8_3:31246975-31246994 | None:intergenic | 55.0% | |
| GATAGGGGTGAATTCGGGAG+AGG | + | chr8_3:31246987-31247006 | None:intergenic | 55.0% | |
| !! | AGTGGAGGTGGATTTGGTGG+AGG | + | chr8_3:31247011-31247030 | None:intergenic | 55.0% |
| ! | GAGAGTGGAGGTGGATTTGG+TGG | + | chr8_3:31247014-31247033 | None:intergenic | 55.0% |
| ! | GGTGAGAGTGGAGGTGGATT+TGG | + | chr8_3:31247017-31247036 | None:intergenic | 55.0% |
| GAAATCGGATCGGGTGAGAG+TGG | + | chr8_3:31247029-31247048 | None:intergenic | 55.0% | |
| GATTTCGTCGAAGCGGTGGA+AGG | + | chr8_3:31247080-31247099 | None:intergenic | 55.0% | |
| TCAACTATCTCCGACGACGG+CGG | - | chr8_3:31247124-31247143 | Msa1285660:intron | 55.0% | |
| ! | TGCTGAGAACGCGGTTTTGC+AGG | - | chr8_3:31247261-31247280 | Msa1285660:intron | 55.0% |
| !! | GTCGTCGTTCTTTGAAGCGC+AGG | - | chr8_3:31247348-31247367 | Msa1285660:intron | 55.0% |
| CCTCGCAGACTCAGCCAAAT+CGG | + | chr8_3:31247458-31247477 | None:intergenic | 55.0% | |
| TGCAGATTGTGCTGGAGCAC+TGG | - | chr8_3:31248258-31248277 | Msa1285660:intron | 55.0% | |
| TAGGATGGAGACGAGCTCAC+TGG | - | chr8_3:31249021-31249040 | Msa1285660:CDS | 55.0% | |
| GGGGTTCACTTGAATCCCCT+GGG | - | chr8_3:31246772-31246791 | Msa1285660:CDS | 55.0% | |
| TGAATCCCCTGGGTGTAACG+TGG | - | chr8_3:31246782-31246801 | Msa1285660:CDS | 55.0% | |
| CGGTTGTTGAGAAGCAGTGG+CGG | + | chr8_3:31246810-31246829 | None:intergenic | 55.0% | |
| CGACGGTTGTTGAGAAGCAG+TGG | + | chr8_3:31246813-31246832 | None:intergenic | 55.0% | |
| CTGCTTCTCAACAACCGTCG+TGG | - | chr8_3:31246813-31246832 | Msa1285660:CDS | 55.0% | |
| GCTTCTCAACAACCGTCGTG+GGG | - | chr8_3:31246815-31246834 | Msa1285660:CDS | 55.0% | |
| !! | AGATGGGTGGTGGAGAAGGT+CGG | + | chr8_3:31246848-31246867 | None:intergenic | 55.0% |
| !! | GTTGAGATGGGTGGTGGAGA+AGG | + | chr8_3:31246852-31246871 | None:intergenic | 55.0% |
| GGAGGTTGTGCGGTTGAGAT+GGG | + | chr8_3:31246864-31246883 | None:intergenic | 55.0% | |
| TGGAGGTTGTGCGGTTGAGA+TGG | + | chr8_3:31246865-31246884 | None:intergenic | 55.0% | |
| TTCGGGAGAGGAGATTGTGG+TGG | + | chr8_3:31246975-31246994 | None:intergenic | 55.0% | |
| GATAGGGGTGAATTCGGGAG+AGG | + | chr8_3:31246987-31247006 | None:intergenic | 55.0% | |
| !! | AGTGGAGGTGGATTTGGTGG+AGG | + | chr8_3:31247011-31247030 | None:intergenic | 55.0% |
| ! | GAGAGTGGAGGTGGATTTGG+TGG | + | chr8_3:31247014-31247033 | None:intergenic | 55.0% |
| ! | GGTGAGAGTGGAGGTGGATT+TGG | + | chr8_3:31247017-31247036 | None:intergenic | 55.0% |
| GAAATCGGATCGGGTGAGAG+TGG | + | chr8_3:31247029-31247048 | None:intergenic | 55.0% | |
| GATTTCGTCGAAGCGGTGGA+AGG | + | chr8_3:31247080-31247099 | None:intergenic | 55.0% | |
| TCAACTATCTCCGACGACGG+CGG | - | chr8_3:31247124-31247143 | Msa1285660:intron | 55.0% | |
| ! | TGCTGAGAACGCGGTTTTGC+AGG | - | chr8_3:31247261-31247280 | Msa1285660:intron | 55.0% |
| !! | GTCGTCGTTCTTTGAAGCGC+AGG | - | chr8_3:31247348-31247367 | Msa1285660:intron | 55.0% |
| CCTCGCAGACTCAGCCAAAT+CGG | + | chr8_3:31247458-31247477 | None:intergenic | 55.0% | |
| TGCAGATTGTGCTGGAGCAC+TGG | - | chr8_3:31248258-31248277 | Msa1285660:intron | 55.0% | |
| TAGGATGGAGACGAGCTCAC+TGG | - | chr8_3:31249021-31249040 | Msa1285660:CDS | 55.0% | |
| GGGGGTTCACTTGAATCCCC+TGG | - | chr8_3:31246771-31246790 | Msa1285660:CDS | 60.0% | |
| GTCGGTGATCTTCCCCACGA+CGG | + | chr8_3:31246830-31246849 | None:intergenic | 60.0% | |
| TGTGCGGTTGAGATGGGTGG+TGG | + | chr8_3:31246858-31246877 | None:intergenic | 60.0% | |
| GGTTGTGCGGTTGAGATGGG+TGG | + | chr8_3:31246861-31246880 | None:intergenic | 60.0% | |
| ATCGGATCGGGTGAGAGTGG+AGG | + | chr8_3:31247026-31247045 | None:intergenic | 60.0% | |
| GTCGAAGCGGTGGAAGGGAT+CGG | + | chr8_3:31247074-31247093 | None:intergenic | 60.0% | |
| TGCGGATTTCGTCGAAGCGG+TGG | + | chr8_3:31247084-31247103 | None:intergenic | 60.0% | |
| ACACGCGACGAGTGCTTCTC+CGG | + | chr8_3:31247152-31247171 | None:intergenic | 60.0% | |
| TGAAGCGCAGGGTGAGTTGC+AGG | - | chr8_3:31247360-31247379 | Msa1285660:intron | 60.0% | |
| !! | CCGATTTGGCTGAGTCTGCG+AGG | - | chr8_3:31247455-31247474 | Msa1285660:intron | 60.0% |
| GGGGGTTCACTTGAATCCCC+TGG | - | chr8_3:31246771-31246790 | Msa1285660:CDS | 60.0% | |
| GTCGGTGATCTTCCCCACGA+CGG | + | chr8_3:31246830-31246849 | None:intergenic | 60.0% | |
| TGTGCGGTTGAGATGGGTGG+TGG | + | chr8_3:31246858-31246877 | None:intergenic | 60.0% | |
| GGTTGTGCGGTTGAGATGGG+TGG | + | chr8_3:31246861-31246880 | None:intergenic | 60.0% | |
| ATCGGATCGGGTGAGAGTGG+AGG | + | chr8_3:31247026-31247045 | None:intergenic | 60.0% | |
| GTCGAAGCGGTGGAAGGGAT+CGG | + | chr8_3:31247074-31247093 | None:intergenic | 60.0% | |
| TGCGGATTTCGTCGAAGCGG+TGG | + | chr8_3:31247084-31247103 | None:intergenic | 60.0% | |
| ACACGCGACGAGTGCTTCTC+CGG | + | chr8_3:31247152-31247171 | None:intergenic | 60.0% | |
| TGAAGCGCAGGGTGAGTTGC+AGG | - | chr8_3:31247360-31247379 | Msa1285660:intron | 60.0% | |
| !! | CCGATTTGGCTGAGTCTGCG+AGG | - | chr8_3:31247455-31247474 | Msa1285660:intron | 60.0% |
| CGGAGCCACGTTACACCCAG+GGG | + | chr8_3:31246790-31246809 | None:intergenic | 65.0% | |
| GCGGAGCCACGTTACACCCA+GGG | + | chr8_3:31246791-31246810 | None:intergenic | 65.0% | |
| GGATCGGGTGAGAGTGGAGG+TGG | + | chr8_3:31247023-31247042 | None:intergenic | 65.0% | |
| GCGGTGGAAGGGATCGGAGA+GGG | + | chr8_3:31247068-31247087 | None:intergenic | 65.0% | |
| AGCGGTGGAAGGGATCGGAG+AGG | + | chr8_3:31247069-31247088 | None:intergenic | 65.0% | |
| !! | AGAAGGCGCTACGTTCCGCG+CGG | - | chr8_3:31247219-31247238 | Msa1285660:intron | 65.0% |
| CGGAGCCACGTTACACCCAG+GGG | + | chr8_3:31246790-31246809 | None:intergenic | 65.0% | |
| GCGGAGCCACGTTACACCCA+GGG | + | chr8_3:31246791-31246810 | None:intergenic | 65.0% | |
| GGATCGGGTGAGAGTGGAGG+TGG | + | chr8_3:31247023-31247042 | None:intergenic | 65.0% | |
| GCGGTGGAAGGGATCGGAGA+GGG | + | chr8_3:31247068-31247087 | None:intergenic | 65.0% | |
| AGCGGTGGAAGGGATCGGAG+AGG | + | chr8_3:31247069-31247088 | None:intergenic | 65.0% | |
| !! | AGAAGGCGCTACGTTCCGCG+CGG | - | chr8_3:31247219-31247238 | Msa1285660:intron | 65.0% |
| GGCGGAGCCACGTTACACCC+AGG | + | chr8_3:31246792-31246811 | None:intergenic | 70.0% | |
| ATCTCCGACGACGGCGGTGC+CGG | - | chr8_3:31247130-31247149 | Msa1285660:intron | 70.0% | |
| TTCTCCGGCACCGCCGTCGT+CGG | + | chr8_3:31247137-31247156 | None:intergenic | 70.0% | |
| TCGAGAACGGACACGCCGCG+CGG | + | chr8_3:31247237-31247256 | None:intergenic | 70.0% | |
| GGCGGAGCCACGTTACACCC+AGG | + | chr8_3:31246792-31246811 | None:intergenic | 70.0% | |
| ATCTCCGACGACGGCGGTGC+CGG | - | chr8_3:31247130-31247149 | Msa1285660:intron | 70.0% | |
| TTCTCCGGCACCGCCGTCGT+CGG | + | chr8_3:31247137-31247156 | None:intergenic | 70.0% | |
| TCGAGAACGGACACGCCGCG+CGG | + | chr8_3:31247237-31247256 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 31246740 | 31249152 | 31246740 | ID=Msa1285660;Name=Msa1285660 |
| chr8_3 | mRNA | 31246740 | 31249152 | 31246740 | ID=Msa1285660-mRNA-1;Parent=Msa1285660;Name=Msa1285660-mRNA-1;_AED=0.21;_eAED=0.24;_QI=0|0.33|0.25|1|1|1|4|0|333 |
| chr8_3 | exon | 31249118 | 31249152 | 31249118 | ID=Msa1285660-mRNA-1:exon:9937;Parent=Msa1285660-mRNA-1 |
| chr8_3 | exon | 31248277 | 31249051 | 31248277 | ID=Msa1285660-mRNA-1:exon:9936;Parent=Msa1285660-mRNA-1 |
| chr8_3 | exon | 31247583 | 31247645 | 31247583 | ID=Msa1285660-mRNA-1:exon:9935;Parent=Msa1285660-mRNA-1 |
| chr8_3 | exon | 31246740 | 31246868 | 31246740 | ID=Msa1285660-mRNA-1:exon:9934;Parent=Msa1285660-mRNA-1 |
| chr8_3 | CDS | 31249118 | 31249152 | 31249118 | ID=Msa1285660-mRNA-1:cds;Parent=Msa1285660-mRNA-1 |
| chr8_3 | CDS | 31248277 | 31249051 | 31248277 | ID=Msa1285660-mRNA-1:cds;Parent=Msa1285660-mRNA-1 |
| chr8_3 | CDS | 31247583 | 31247645 | 31247583 | ID=Msa1285660-mRNA-1:cds;Parent=Msa1285660-mRNA-1 |
| chr8_3 | CDS | 31246740 | 31246868 | 31246740 | ID=Msa1285660-mRNA-1:cds;Parent=Msa1285660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
