Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288390 | XP_013445715.1 | 92.725 | 701 | 38 | 5 | 1 | 692 | 1 | 697 | 0.0 | 1292 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288390 | sp|Q66LG9|CENPC_ARATH | 31.365 | 762 | 375 | 31 | 9 | 692 | 14 | 705 | 5.84e-57 | 209 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288390 | Q66LI1 | 92.725 | 701 | 38 | 5 | 1 | 692 | 1 | 697 | 0.0 | 1292 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0531960 | Msa1288390 | 0.805461 | 1.320287e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288390 | MtrunA17_Chr8g0361761 | 92.725 | 701 | 38 | 5 | 1 | 692 | 1 | 697 | 0.0 | 1292 |
| Msa1288390 | MtrunA17_Chr6g0478101 | 71.969 | 635 | 156 | 8 | 68 | 692 | 6 | 628 | 0.0 | 870 |
| Msa1288390 | MtrunA17_Chr3g0094821 | 37.063 | 143 | 54 | 4 | 239 | 373 | 14 | 128 | 1.88e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288390 | AT1G15660.1 | 31.365 | 762 | 375 | 31 | 9 | 692 | 14 | 705 | 5.94e-58 | 209 |
Find 173 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCATATTAGTGAATAATT+TGG | 0.189163 | 8_3:-41271969 | Msa1288390:CDS |
| TTATCTTTAGTCTCTATTAA+TGG | 0.195234 | 8_3:-41267735 | Msa1288390:three_prime_UTR |
| TTCATACCATTGCTGAATTC+TGG | 0.197549 | 8_3:+41267659 | None:intergenic |
| AGATCAATCGGTTGGATATC+TGG | 0.242995 | 8_3:+41270827 | None:intergenic |
| TCCCAAATTATTCACTAATA+TGG | 0.247175 | 8_3:+41271967 | None:intergenic |
| GGACAAGGCCTTTGGAATAT+TGG | 0.256708 | 8_3:-41268522 | Msa1288390:CDS |
| GGTTCTGTGGCACCTCTTAA+TGG | 0.264813 | 8_3:-41268753 | Msa1288390:CDS |
| CAGCACAGGATGAGCCTTGC+AGG | 0.272896 | 8_3:-41268675 | Msa1288390:intron |
| ACTTACTCTCCCGCCGTTCA+TGG | 0.281713 | 8_3:+41271630 | None:intergenic |
| TCAATTTCATGAGCTGAAAA+TGG | 0.291508 | 8_3:+41270596 | None:intergenic |
| AGAATTCCTCAGGATCTTTA+TGG | 0.307375 | 8_3:+41271660 | None:intergenic |
| CAGGACTTCCAGGGTTTAAT+CGG | 0.319858 | 8_3:-41271441 | Msa1288390:CDS |
| TGAGGATTTGTTACCGAGTC+TGG | 0.323057 | 8_3:-41271693 | Msa1288390:CDS |
| GATCCTATCGCAAACTATTC+TGG | 0.334868 | 8_3:-41272926 | Msa1288390:CDS |
| TCCATATTAGTGAATAATTT+GGG | 0.340044 | 8_3:-41271968 | Msa1288390:CDS |
| CATCCTCGAATCTTCTTCCT+TGG | 0.342970 | 8_3:+41270415 | None:intergenic |
| AACCTATGTCTGTATTTAAC+TGG | 0.354635 | 8_3:+41271312 | None:intergenic |
| CCCTTGTTCTCTTCAACAGC+TGG | 0.354900 | 8_3:+41270980 | None:intergenic |
| AGCGAAGCAAATGGACTTCT+TGG | 0.359452 | 8_3:+41270665 | None:intergenic |
| AGACTAAAGATAAGTCATTC+AGG | 0.365509 | 8_3:+41267745 | None:intergenic |
| ATGTTGGATAAAGCCTTTCT+TGG | 0.366124 | 8_3:+41270776 | None:intergenic |
| TGGTCCAGAACAGAGTTTAC+AGG | 0.366217 | 8_3:-41269609 | Msa1288390:intron |
| GTTCTGTGGCACCTCTTAAT+GGG | 0.370664 | 8_3:-41268752 | Msa1288390:CDS |
| TGTTTAGTTGAATCTTGATT+TGG | 0.371696 | 8_3:+41271478 | None:intergenic |
| AATGACTTCACCTTCATGTT+TGG | 0.376204 | 8_3:+41267884 | None:intergenic |
| AAGGTTCAGGACAAGGCCTT+TGG | 0.380444 | 8_3:-41268530 | Msa1288390:CDS |
| AGATCCTGAGGAATTCTTCT+TGG | 0.386966 | 8_3:-41271654 | Msa1288390:CDS |
| TCGGATTGGTAAGGTTCATT+TGG | 0.387819 | 8_3:+41270143 | None:intergenic |
| CAGGTTTGAGTACTGTCATT+GGG | 0.396194 | 8_3:-41267940 | Msa1288390:CDS |
| TAAGGAGAAGCAAAAGGTTC+AGG | 0.401378 | 8_3:-41268543 | Msa1288390:CDS |
| GTTCAACAAATTATCTATGT+TGG | 0.402232 | 8_3:+41270760 | None:intergenic |
| CGAAAACGGAGACCGGGTTT+AGG | 0.407666 | 8_3:-41271869 | Msa1288390:CDS |
| CTGAAGTCTCTTCTTACCCT+TGG | 0.411105 | 8_3:+41268695 | None:intergenic |
| AGGACTTCCAGGGTTTAATC+GGG | 0.412169 | 8_3:-41271440 | Msa1288390:CDS |
| CGAGCATCAAGCCAATTCTA+TGG | 0.414870 | 8_3:-41269657 | Msa1288390:CDS |
| GCAATAACATCTTCAATTAC+AGG | 0.415268 | 8_3:+41270479 | None:intergenic |
| GGAACCTGTAAACTCTGTTC+TGG | 0.415815 | 8_3:+41269605 | None:intergenic |
| GAACAAAAGCATTGAATGAA+TGG | 0.415974 | 8_3:-41272972 | Msa1288390:exon |
| ATTTCCTCGAAAACGGAGAC+CGG | 0.416559 | 8_3:-41271876 | Msa1288390:CDS |
| TTTGGTTTCCCATCACCTCC+TGG | 0.417274 | 8_3:+41267902 | None:intergenic |
| ACGAAAATTTGAATTTAGTT+CGG | 0.420177 | 8_3:-41273004 | Msa1288390:five_prime_UTR |
| TGTCAGATTCAAACGCCTCT+TGG | 0.421989 | 8_3:+41271247 | None:intergenic |
| GATAATTTCTCGAAAACAAT+GGG | 0.422693 | 8_3:+41270863 | None:intergenic |
| CGATGCTTCACCTACATCAT+TGG | 0.426838 | 8_3:-41271190 | Msa1288390:CDS |
| GAAGTCCTGGTCGACGCTCC+CGG | 0.428722 | 8_3:+41271455 | None:intergenic |
| AGAAGAAGAAGAAGGTTGAA+AGG | 0.430305 | 8_3:+41272877 | None:intergenic |
| CGCAAGGACTTCAGATCAAT+CGG | 0.430619 | 8_3:+41270815 | None:intergenic |
| GTTGACATGGATGTAGATAT+TGG | 0.433103 | 8_3:-41270224 | Msa1288390:CDS |
| TGGTGAGACAAATACAATTC+TGG | 0.435122 | 8_3:-41270453 | Msa1288390:CDS |
| GGCCTTTGGAATATTGGAAA+GGG | 0.438254 | 8_3:-41268516 | Msa1288390:CDS |
| GCAGGTTTGAGTACTGTCAT+TGG | 0.447015 | 8_3:-41267941 | Msa1288390:intron |
| GTCAGATTCAAACGCCTCTT+GGG | 0.452834 | 8_3:+41271248 | None:intergenic |
| AATCAGGAAGTCAATATTGT+TGG | 0.453090 | 8_3:-41270533 | Msa1288390:CDS |
| TCCTACTAGACTTGCAGAGC+AGG | 0.454580 | 8_3:-41271996 | Msa1288390:CDS |
| ACCAACTGATACGATAAATC+AGG | 0.457932 | 8_3:-41270549 | Msa1288390:CDS |
| AATGGACTTCTTGGTGGCGT+GGG | 0.461408 | 8_3:+41270674 | None:intergenic |
| GCTGGTACATCATGGGAGTC+TGG | 0.463054 | 8_3:-41268568 | Msa1288390:CDS |
| GAAGAAGAAGAAGGTTGAAA+GGG | 0.465510 | 8_3:+41272878 | None:intergenic |
| CGATTAAACCCTGGAAGTCC+TGG | 0.465884 | 8_3:+41271442 | None:intergenic |
| ACTCTGTTCTGGACCATCAA+TGG | 0.466729 | 8_3:+41269616 | None:intergenic |
| GTGAAGAATTTCCTCGAAAA+CGG | 0.473214 | 8_3:-41271883 | Msa1288390:CDS |
| GATCAATCGGTTGGATATCT+GGG | 0.473411 | 8_3:+41270828 | None:intergenic |
| ATATCTACATCCATGTCAAC+AGG | 0.473791 | 8_3:+41270227 | None:intergenic |
| GTGTCAGTGTTATCACCAAC+AGG | 0.476437 | 8_3:+41271216 | None:intergenic |
| AAGCCAATTCTATGGACAAA+AGG | 0.480778 | 8_3:-41269649 | Msa1288390:CDS |
| AATTCTATGGACAAAAGGTC+TGG | 0.484379 | 8_3:-41269644 | Msa1288390:CDS |
| GGTTGGATATCTGGGAAGTC+TGG | 0.485000 | 8_3:+41270836 | None:intergenic |
| AGAGTTATGGATGACATAGT+AGG | 0.488677 | 8_3:-41270182 | Msa1288390:CDS |
| GTCGAGATCGTGAAAGGGAT+TGG | 0.488874 | 8_3:+41272853 | None:intergenic |
| TCCTGATTTATCGTATCAGT+TGG | 0.490134 | 8_3:+41270548 | None:intergenic |
| CCCTGCTCTGCAAGTCTAGT+AGG | 0.491251 | 8_3:+41271995 | None:intergenic |
| AAGAGAATTGCAAAAGCAGT+TGG | 0.494436 | 8_3:-41271518 | Msa1288390:CDS |
| CTTACTCTCCCGCCGTTCAT+GGG | 0.494832 | 8_3:+41271631 | None:intergenic |
| GATATTGGAGGCAGTGGTAT+GGG | 0.499273 | 8_3:-41270209 | Msa1288390:CDS |
| AGTCCATGGTGAATAATTCA+AGG | 0.504744 | 8_3:-41270289 | Msa1288390:CDS |
| TTCCAGATGCTGGTACATCA+TGG | 0.504858 | 8_3:-41268576 | Msa1288390:intron |
| GGGTACACTGAGAAGCAGTT+AGG | 0.509664 | 8_3:-41270701 | Msa1288390:CDS |
| AGATATTGGAGGCAGTGGTA+TGG | 0.511252 | 8_3:-41270210 | Msa1288390:CDS |
| ATTTGAATTTAGTTCGGAAG+CGG | 0.513933 | 8_3:-41272998 | Msa1288390:five_prime_UTR |
| ACACCGCTTAGGCGGGATGT+AGG | 0.514473 | 8_3:-41270722 | Msa1288390:CDS |
| TGATTTATCGTATCAGTTGG+TGG | 0.515052 | 8_3:+41270551 | None:intergenic |
| TTCACATTTGCATCATCTGT+TGG | 0.516518 | 8_3:+41269989 | None:intergenic |
| CTTCTTGGCCCATGAACGGC+GGG | 0.519684 | 8_3:-41271639 | Msa1288390:CDS |
| ATTGAAGATGTTATTGCTGC+TGG | 0.520826 | 8_3:-41270473 | Msa1288390:CDS |
| CATCATGGGAGTCTGGAGTA+AGG | 0.522515 | 8_3:-41268561 | Msa1288390:CDS |
| AATGGCGTCGAGATCGTGAA+AGG | 0.523872 | 8_3:+41272847 | None:intergenic |
| AGGTCTGGAAGATCCATTGA+TGG | 0.524947 | 8_3:-41269629 | Msa1288390:CDS |
| AGAGAATTGCAAAAGCAGTT+GGG | 0.525990 | 8_3:-41271517 | Msa1288390:CDS |
| CTGATACAGGCAAACACAGT+TGG | 0.526013 | 8_3:-41268774 | Msa1288390:intron |
| TGGTATGGGAAAGAGAGTTA+TGG | 0.527449 | 8_3:-41270195 | Msa1288390:CDS |
| TATTAAGACACCGCTTAGGC+GGG | 0.528052 | 8_3:-41270729 | Msa1288390:CDS |
| TCCCCTTTCCAATATTCCAA+AGG | 0.529475 | 8_3:+41268514 | None:intergenic |
| CAAACGCCTCTTGGGAGGAT+AGG | 0.532877 | 8_3:+41271256 | None:intergenic |
| ATTTGACAGGCCCTCTGTTG+AGG | 0.533937 | 8_3:-41271711 | Msa1288390:intron |
| AGATAATTTCTCGAAAACAA+TGG | 0.543336 | 8_3:+41270862 | None:intergenic |
| AAATGAACCTCCTGTTGACA+TGG | 0.543972 | 8_3:-41270237 | Msa1288390:CDS |
| AACGCGGACGTGCACGATTG+AGG | 0.544754 | 8_3:+41271846 | None:intergenic |
| ATGGACTTCTTGGTGGCGTG+GGG | 0.550400 | 8_3:+41270675 | None:intergenic |
| GTACTGATGCAATTTCTGAC+AGG | 0.550548 | 8_3:+41270320 | None:intergenic |
| CTGGAGTAAGGAGAAGCAAA+AGG | 0.555424 | 8_3:-41268549 | Msa1288390:CDS |
| GTAAGAAGAGACTTCAGCAC+AGG | 0.555668 | 8_3:-41268689 | Msa1288390:CDS |
| GAATTCGTCAAAGCCAAGAA+AGG | 0.557231 | 8_3:-41270789 | Msa1288390:CDS |
| CTTTGACGAATTCTCTCGCA+AGG | 0.559312 | 8_3:+41270799 | None:intergenic |
| GGCAAACACAGTTGGTTCTG+TGG | 0.560972 | 8_3:-41268766 | Msa1288390:CDS |
| GATGTAGATATTGGAGGCAG+TGG | 0.561351 | 8_3:-41270215 | Msa1288390:CDS |
| AACATACGTTGTCCTCGGAT+TGG | 0.563004 | 8_3:+41270129 | None:intergenic |
| TGGGCCAAGAAGAATTCCTC+AGG | 0.563849 | 8_3:+41271650 | None:intergenic |
| GGCCAGTTAAATACAGACAT+AGG | 0.564197 | 8_3:-41271314 | Msa1288390:CDS |
| AAATGGACTTCTTGGTGGCG+TGG | 0.565357 | 8_3:+41270673 | None:intergenic |
| ACGTTGTCCTCGGATTGGTA+AGG | 0.565986 | 8_3:+41270134 | None:intergenic |
| AATCCAAGGAAGAAGATTCG+AGG | 0.567226 | 8_3:-41270418 | Msa1288390:CDS |
| AGGACTTCAGATCAATCGGT+TGG | 0.567296 | 8_3:+41270819 | None:intergenic |
| GAAGCAAATGGACTTCTTGG+TGG | 0.568607 | 8_3:+41270668 | None:intergenic |
| TCCAGATGCTGGTACATCAT+GGG | 0.569611 | 8_3:-41268575 | Msa1288390:intron |
| AGGCCTTTGGAATATTGGAA+AGG | 0.570316 | 8_3:-41268517 | Msa1288390:CDS |
| GGATCTGAGATTGTTGTGAA+TGG | 0.571024 | 8_3:+41272829 | None:intergenic |
| GATAAGCTTTACTTTCTGGT+CGG | 0.571071 | 8_3:+41271812 | None:intergenic |
| ACTTCGTTATCCAATGATGT+AGG | 0.571084 | 8_3:+41271180 | None:intergenic |
| TGTAATTCTGAAGAACTAGA+GGG | 0.571598 | 8_3:-41270929 | Msa1288390:CDS |
| AATTCTTCTTGGCCCATGAA+CGG | 0.571807 | 8_3:-41271643 | Msa1288390:CDS |
| GAAGCAAAAGGTTCAGGACA+AGG | 0.572127 | 8_3:-41268537 | Msa1288390:CDS |
| ACCAGCTGTTGAAGAGAACA+AGG | 0.574702 | 8_3:-41270981 | Msa1288390:CDS |
| ATATTGGAAAGGGGAAAGAA+TGG | 0.575060 | 8_3:-41268506 | Msa1288390:CDS |
| TTGTAATTCTGAAGAACTAG+AGG | 0.577488 | 8_3:-41270930 | Msa1288390:CDS |
| ATGTGCACAGAAAGTGTCCA+AGG | 0.578174 | 8_3:-41268712 | Msa1288390:CDS |
| ATATTAAGACACCGCTTAGG+CGG | 0.578346 | 8_3:-41270730 | Msa1288390:CDS |
| TTTCCTCGAAAACGGAGACC+GGG | 0.581467 | 8_3:-41271875 | Msa1288390:CDS |
| TAGATATTAAGACACCGCTT+AGG | 0.581671 | 8_3:-41270733 | Msa1288390:CDS |
| AGATGATGCAAATGTGAACT+TGG | 0.581915 | 8_3:-41269984 | Msa1288390:CDS |
| AAAGGGGAAAGAATGGTGTA+TGG | 0.583423 | 8_3:-41268499 | Msa1288390:CDS |
| ATCAAGATTCAACTAAACAC+CGG | 0.586493 | 8_3:-41271474 | Msa1288390:CDS |
| AGACCAGAATAGTTTGCGAT+AGG | 0.590204 | 8_3:+41272923 | None:intergenic |
| CAGTACTCTTCAAAAGTCCA+TGG | 0.591447 | 8_3:-41270303 | Msa1288390:CDS |
| AGAAAACTTAACTCAAGATG+TGG | 0.594730 | 8_3:-41271936 | Msa1288390:CDS |
| GTCCATGGTGAATAATTCAA+GGG | 0.596097 | 8_3:-41270288 | Msa1288390:CDS |
| TTCCCTTGAATTATTCACCA+TGG | 0.596832 | 8_3:+41270286 | None:intergenic |
| AGCGTCGACCAGGACTTCCA+GGG | 0.598897 | 8_3:-41271450 | Msa1288390:CDS |
| GCCTTTGGAATATTGGAAAG+GGG | 0.599083 | 8_3:-41268515 | Msa1288390:CDS |
| GTGAACTTGGTGATTCCACT+AGG | 0.600174 | 8_3:-41269971 | Msa1288390:intron |
| CAGGTAACATACGTTGTCCT+CGG | 0.602307 | 8_3:+41270124 | None:intergenic |
| TCACAACAATCTCAGATCCA+TGG | 0.605331 | 8_3:-41272825 | Msa1288390:intron |
| GACTTCCAGGGTTTAATCGG+GGG | 0.608078 | 8_3:-41271438 | Msa1288390:intron |
| AGATTCAAACGCCTCTTGGG+AGG | 0.610758 | 8_3:+41271251 | None:intergenic |
| GCTGAAAATGGATCTACTGA+TGG | 0.611650 | 8_3:+41270608 | None:intergenic |
| TCATTGGATAACGAAGTAGC+TGG | 0.613050 | 8_3:-41271174 | Msa1288390:intron |
| TCAACATTAGCATTAAACTC+AGG | 0.613608 | 8_3:+41270263 | None:intergenic |
| GGACTTCCAGGGTTTAATCG+GGG | 0.615381 | 8_3:-41271439 | Msa1288390:CDS |
| TCTTCTTGGCCCATGAACGG+CGG | 0.615777 | 8_3:-41271640 | Msa1288390:CDS |
| TGGACTTCTTGGTGGCGTGG+GGG | 0.618959 | 8_3:+41270676 | None:intergenic |
| TAATTCTGAAGAACTAGAGG+GGG | 0.627822 | 8_3:-41270927 | Msa1288390:CDS |
| GGATTGGAAGAAGAAGAAGA+AGG | 0.628901 | 8_3:+41272869 | None:intergenic |
| ATGGCGTCGAGATCGTGAAA+GGG | 0.634449 | 8_3:+41272848 | None:intergenic |
| ATGAGAAGTACAAACCTGCA+AGG | 0.635711 | 8_3:+41268661 | None:intergenic |
| TCTGACACTCTCGATCCTGT+TGG | 0.640360 | 8_3:-41271231 | Msa1288390:CDS |
| TGATGGGAAACCAAACATGA+AGG | 0.641301 | 8_3:-41267894 | Msa1288390:CDS |
| TCAAGATTCAACTAAACACC+GGG | 0.645059 | 8_3:-41271473 | Msa1288390:CDS |
| CCTACTAGACTTGCAGAGCA+GGG | 0.646821 | 8_3:-41271995 | Msa1288390:CDS |
| GGTAACAAATCCTCAACAGA+GGG | 0.650453 | 8_3:+41271701 | None:intergenic |
| AAAAGACCATAAAGATCCTG+AGG | 0.650839 | 8_3:-41271666 | Msa1288390:CDS |
| AGGTTTGAGTACTGTCATTG+GGG | 0.652495 | 8_3:-41267939 | Msa1288390:CDS |
| GCACGATTGAGGCCTAAACC+CGG | 0.657424 | 8_3:+41271857 | None:intergenic |
| TTATGGATGACATAGTAGGA+AGG | 0.659884 | 8_3:-41270178 | Msa1288390:CDS |
| AAACATCCAGAATTCAGCAA+TGG | 0.662326 | 8_3:-41267665 | Msa1288390:three_prime_UTR |
| TGTACTCACTCTCATGTACA+CGG | 0.665565 | 8_3:+41268476 | None:intergenic |
| GTAATTCTGAAGAACTAGAG+GGG | 0.667017 | 8_3:-41270928 | Msa1288390:CDS |
| AAATGAACCTTACCAATCCG+AGG | 0.680786 | 8_3:-41270141 | Msa1288390:CDS |
| TGATGTCCTATCCTCCCAAG+AGG | 0.681042 | 8_3:-41271262 | Msa1288390:CDS |
| GACATGGATGTAGATATTGG+AGG | 0.687808 | 8_3:-41270221 | Msa1288390:CDS |
| TCTACATCCATGTCAACAGG+AGG | 0.688882 | 8_3:+41270230 | None:intergenic |
| GTTGGTGATAACACTGACAC+AGG | 0.691169 | 8_3:-41271213 | Msa1288390:CDS |
| TGTGCACAGAAAGTGTCCAA+GGG | 0.693255 | 8_3:-41268711 | Msa1288390:CDS |
| CGGTAACAAATCCTCAACAG+AGG | 0.703383 | 8_3:+41271700 | None:intergenic |
| CCAGCTGTTGAAGAGAACAA+GGG | 0.729517 | 8_3:-41270980 | Msa1288390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAATTACTAATAAAGT+AGG | - | chr8_3:41268441-41268460 | Msa1288390:intron | 10.0% |
| !!! | TTGATTTTGAAATTTTATTT+GGG | - | chr8_3:41268896-41268915 | Msa1288390:intron | 10.0% |
| !!! | TTTTGTTATATTTGTAAATT+TGG | - | chr8_3:41272209-41272228 | Msa1288390:intron | 10.0% |
| !!! | ATTTTAGTTTTGTAATTGTT+AGG | - | chr8_3:41268013-41268032 | Msa1288390:intron | 15.0% |
| !!! | TTTTAGTTTTGTAATTGTTA+GGG | - | chr8_3:41268014-41268033 | Msa1288390:intron | 15.0% |
| !!! | TTAGTTGAATTTTTGTTATT+AGG | - | chr8_3:41268140-41268159 | Msa1288390:intron | 15.0% |
| !!! | TAGTTGAATTTTTGTTATTA+GGG | - | chr8_3:41268141-41268160 | Msa1288390:intron | 15.0% |
| !!! | TTTAGTTTTAATTTAGCATT+TGG | - | chr8_3:41268269-41268288 | Msa1288390:intron | 15.0% |
| !!! | TTAGTTTTAATTTAGCATTT+GGG | - | chr8_3:41268270-41268289 | Msa1288390:intron | 15.0% |
| !!! | GTTTTTTATTATGTTTGAAT+AGG | - | chr8_3:41268624-41268643 | Msa1288390:intron | 15.0% |
| !!! | GTTGATTTTGAAATTTTATT+TGG | - | chr8_3:41268895-41268914 | Msa1288390:intron | 15.0% |
| !! | ATTATTAAACTAAAATACAC+AGG | + | chr8_3:41270551-41270570 | None:intergenic | 15.0% |
| !!! | TATATTCACAACATTTTATA+AGG | - | chr8_3:41270711-41270730 | Msa1288390:CDS | 15.0% |
| !!! | TATTGATTTTGATTGTATAA+GGG | + | chr8_3:41271242-41271261 | None:intergenic | 15.0% |
| !! | TAGTTATCTACATATAATAA+TGG | + | chr8_3:41272589-41272608 | None:intergenic | 15.0% |
| !!! | ATTTTAGTTCTGTAATTGTT+GGG | - | chr8_3:41268075-41268094 | Msa1288390:intron | 20.0% |
| !!! | AATTTTTGTTATTAGGGTTA+TGG | - | chr8_3:41268147-41268166 | Msa1288390:intron | 20.0% |
| !!! | TTGCAATTTTGATACATTTA+AGG | - | chr8_3:41268478-41268497 | Msa1288390:intron | 20.0% |
| !! | TCCATATTAGTGAATAATTT+GGG | - | chr8_3:41268685-41268704 | Msa1288390:CDS | 20.0% |
| !!! | ATTATTTTCCAAAGTTTCTT+GGG | + | chr8_3:41269369-41269388 | None:intergenic | 20.0% |
| !! | TGATAAATAAACTTAGAGTA+AGG | + | chr8_3:41270737-41270756 | None:intergenic | 20.0% |
| !! | CTCAGAAAATTTATATGAAA+AGG | + | chr8_3:41271213-41271232 | None:intergenic | 20.0% |
| !!! | CTTTTCATATAAATTTTCTG+AGG | - | chr8_3:41271211-41271230 | Msa1288390:CDS | 20.0% |
| !!! | ATTGATTTTGATTGTATAAG+GGG | + | chr8_3:41271241-41271260 | None:intergenic | 20.0% |
| !!! | GTATTGATTTTGATTGTATA+AGG | + | chr8_3:41271243-41271262 | None:intergenic | 20.0% |
| !! | ATTTATTTCAAAGTTTGATG+TGG | + | chr8_3:41271282-41271301 | None:intergenic | 20.0% |
| !!! | ACTTTGAAATAAATATACAG+TGG | - | chr8_3:41271288-41271307 | Msa1288390:CDS | 20.0% |
| !!! | AATACTATCAGTTTATTTTC+TGG | - | chr8_3:41271375-41271394 | Msa1288390:intron | 20.0% |
| !! | TAAAAAATAGCAACAAACAA+AGG | + | chr8_3:41271676-41271695 | None:intergenic | 20.0% |
| !!! | GATGGCAATATTATTTTTTT+CGG | - | chr8_3:41271825-41271844 | Msa1288390:CDS | 20.0% |
| !!! | TAAGCTATTTTTATAGCAAA+AGG | - | chr8_3:41272349-41272368 | Msa1288390:intron | 20.0% |
| !! | ATAAAACAATTTAATTGTGC+AGG | - | chr8_3:41272694-41272713 | Msa1288390:intron | 20.0% |
| !! | AAAAAGCTGTTTGTATTTAT+CGG | + | chr8_3:41272800-41272819 | None:intergenic | 20.0% |
| !! | TTATCTTTAGTCTCTATTAA+TGG | - | chr8_3:41272918-41272937 | Msa1288390:CDS | 20.0% |
| ! | TTATCATGTTAGTGGAAAAT+TGG | - | chr8_3:41267952-41267971 | Msa1288390:intron | 25.0% |
| !!! | CATTTTAGTTCTGTAATTGT+TGG | - | chr8_3:41268074-41268093 | Msa1288390:intron | 25.0% |
| !!! | TTTTAGTTCTGTAATTGTTG+GGG | - | chr8_3:41268076-41268095 | Msa1288390:intron | 25.0% |
| !!! | TTAGTTCTGTGAATGTTATT+AGG | - | chr8_3:41268205-41268224 | Msa1288390:intron | 25.0% |
| !! | TAGTTCTGTGAATGTTATTA+GGG | - | chr8_3:41268206-41268225 | Msa1288390:intron | 25.0% |
| ! | TGTTATTAGGGTAATTGAAA+TGG | - | chr8_3:41268218-41268237 | Msa1288390:intron | 25.0% |
| ! | GTCCATATTAGTGAATAATT+TGG | - | chr8_3:41268684-41268703 | Msa1288390:CDS | 25.0% |
| ! | TCCCAAATTATTCACTAATA+TGG | + | chr8_3:41268689-41268708 | None:intergenic | 25.0% |
| ! | TGTTTAGTTGAATCTTGATT+TGG | + | chr8_3:41269178-41269197 | None:intergenic | 25.0% |
| ! | GACTGTTGAAAAAGTAAATA+TGG | + | chr8_3:41269247-41269266 | None:intergenic | 25.0% |
| !! | CATTATTTTCCAAAGTTTCT+TGG | + | chr8_3:41269370-41269389 | None:intergenic | 25.0% |
| ! | ACAAAATAAGAGTGACAAAA+AGG | + | chr8_3:41269620-41269639 | None:intergenic | 25.0% |
| ! | ATTTCAAACGATCTTAATTG+TGG | - | chr8_3:41269642-41269661 | Msa1288390:CDS | 25.0% |
| ! | GATAATTTCTCGAAAACAAT+GGG | + | chr8_3:41269793-41269812 | None:intergenic | 25.0% |
| ! | AGATAATTTCTCGAAAACAA+TGG | + | chr8_3:41269794-41269813 | None:intergenic | 25.0% |
| ! | GTTCAACAAATTATCTATGT+TGG | + | chr8_3:41269896-41269915 | None:intergenic | 25.0% |
| !! | GCAATTTTATCTTCAGTTAA+AGG | + | chr8_3:41270285-41270304 | None:intergenic | 25.0% |
| !! | TAATCTTAAGTTGTTGTCAA+AGG | - | chr8_3:41270570-41270589 | Msa1288390:CDS | 25.0% |
| !! | GTATATTCATGCATATTTTC+TGG | + | chr8_3:41270634-41270653 | None:intergenic | 25.0% |
| ! | CTTCTATAATTTCAAATCAG+AGG | + | chr8_3:41270885-41270904 | None:intergenic | 25.0% |
| ! | TACTTTAATCTTCAAACTGT+AGG | - | chr8_3:41271095-41271114 | Msa1288390:intron | 25.0% |
| !!! | TATCAGTTTATTTTCTGGAA+TGG | - | chr8_3:41271380-41271399 | Msa1288390:intron | 25.0% |
| !!! | ATCAGTTTATTTTCTGGAAT+GGG | - | chr8_3:41271381-41271400 | Msa1288390:intron | 25.0% |
| !! | TAAACTGTTTTATACAGTTC+AGG | - | chr8_3:41271511-41271530 | Msa1288390:CDS | 25.0% |
| ! | AGTATGTAATAGGGTTTAAT+TGG | - | chr8_3:41271719-41271738 | Msa1288390:intron | 25.0% |
| ! | AATTATACCTAAATAAGCCT+TGG | - | chr8_3:41271775-41271794 | Msa1288390:intron | 25.0% |
| ! | TAAAATTCCAAGGCTTATTT+AGG | + | chr8_3:41271785-41271804 | None:intergenic | 25.0% |
| !! | ACATCTAGAATAAAATTCCA+AGG | + | chr8_3:41271795-41271814 | None:intergenic | 25.0% |
| !! | TGGAATTTTATTCTAGATGT+TGG | - | chr8_3:41271795-41271814 | Msa1288390:intron | 25.0% |
| !!! | CAAACCTTTTATTTGTTGAT+GGG | - | chr8_3:41272233-41272252 | Msa1288390:intron | 25.0% |
| !!! | AAACCTTTTATTTGTTGATG+GGG | - | chr8_3:41272234-41272253 | Msa1288390:intron | 25.0% |
| !!! | AGTTTTATAAGCTATGTTGT+TGG | - | chr8_3:41272389-41272408 | Msa1288390:intron | 25.0% |
| !!! | TAAGTTTTGTGAGATTCTTT+GGG | + | chr8_3:41272480-41272499 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTGAGATTCTT+TGG | + | chr8_3:41272481-41272500 | None:intergenic | 25.0% |
| ! | ATTTGAATTTAGTTCGGAAG+CGG | - | chr8_3:41267655-41267674 | Msa1288390:three_prime_UTR | 30.0% |
| !! | GAACAAAAGCATTGAATGAA+TGG | - | chr8_3:41267681-41267700 | Msa1288390:three_prime_UTR | 30.0% |
| ATTTGGAAGTGAAAAGGAAA+AGG | + | chr8_3:41267877-41267896 | None:intergenic | 30.0% | |
| TGTGAAATTTGGAAGTGAAA+AGG | + | chr8_3:41267883-41267902 | None:intergenic | 30.0% | |
| TTTCGTTGTTATCATGTTAG+TGG | - | chr8_3:41267944-41267963 | Msa1288390:intron | 30.0% | |
| ! | TTTTGTAATTGTTAGGGTAG+TGG | - | chr8_3:41268020-41268039 | Msa1288390:intron | 30.0% |
| AATTGTTGGGGTAATTGAAA+TGG | - | chr8_3:41268088-41268107 | Msa1288390:intron | 30.0% | |
| TGTTATTAGGGTTATGGAAA+TGG | - | chr8_3:41268153-41268172 | Msa1288390:intron | 30.0% | |
| GGTTGTTAGTTACAAGAAAT+TGG | - | chr8_3:41268239-41268258 | Msa1288390:intron | 30.0% | |
| !!! | CTGTTTTTAGGTACTCAATT+TGG | - | chr8_3:41268385-41268404 | Msa1288390:intron | 30.0% |
| TTACTAATAAAGTAGGCACT+AGG | - | chr8_3:41268448-41268467 | Msa1288390:intron | 30.0% | |
| AGAAAACTTAACTCAAGATG+TGG | - | chr8_3:41268717-41268736 | Msa1288390:CDS | 30.0% | |
| !! | AAATGATGATGTTTTTGCTG+TGG | - | chr8_3:41268741-41268760 | Msa1288390:CDS | 30.0% |
| GTAAGATAAGCTTTACTTTC+TGG | + | chr8_3:41268848-41268867 | None:intergenic | 30.0% | |
| TCATGTGTTCAATATTTGAC+AGG | - | chr8_3:41268929-41268948 | Msa1288390:intron | 30.0% | |
| AAAAAAAGAACAAGCATCCA+TGG | + | chr8_3:41269076-41269095 | None:intergenic | 30.0% | |
| ATCAAGATTCAACTAAACAC+CGG | - | chr8_3:41269179-41269198 | Msa1288390:intron | 30.0% | |
| GTTGAAAAAGTAAATATGGC+CGG | + | chr8_3:41269243-41269262 | None:intergenic | 30.0% | |
| GACAAACAACATAATCACAA+TGG | + | chr8_3:41269275-41269294 | None:intergenic | 30.0% | |
| ! | TGTTGTTTGTCATTCTTTCT+TGG | - | chr8_3:41269284-41269303 | Msa1288390:intron | 30.0% |
| GATGTGTCTTCATGTTATAT+TGG | - | chr8_3:41269313-41269332 | Msa1288390:intron | 30.0% | |
| AACCTATGTCTGTATTTAAC+TGG | + | chr8_3:41269344-41269363 | None:intergenic | 30.0% | |
| !! | AAAAAGGTACTGATATCAGA+AGG | + | chr8_3:41269604-41269623 | None:intergenic | 30.0% |
| ! | TTGTAATTCTGAAGAACTAG+AGG | - | chr8_3:41269723-41269742 | Msa1288390:intron | 30.0% |
| ! | TGTAATTCTGAAGAACTAGA+GGG | - | chr8_3:41269724-41269743 | Msa1288390:intron | 30.0% |
| !! | AATTTTGAAAGCGAAGCAAA+TGG | + | chr8_3:41270000-41270019 | None:intergenic | 30.0% |
| ! | AATTGCAGAAGCAGATTTTA+CGG | - | chr8_3:41270016-41270035 | Msa1288390:CDS | 30.0% |
| TCAATTTCATGAGCTGAAAA+TGG | + | chr8_3:41270060-41270079 | None:intergenic | 30.0% | |
| AATCAGGAAGTCAATATTGT+TGG | - | chr8_3:41270120-41270139 | Msa1288390:intron | 30.0% | |
| GCAATAACATCTTCAATTAC+AGG | + | chr8_3:41270177-41270196 | None:intergenic | 30.0% | |
| TCAACATTAGCATTAAACTC+AGG | + | chr8_3:41270393-41270412 | None:intergenic | 30.0% | |
| GTGAATATATACATACCTAG+TGG | + | chr8_3:41270700-41270719 | None:intergenic | 30.0% | |
| TTAATTACCTTACATCCTAG+GGG | + | chr8_3:41271341-41271360 | None:intergenic | 30.0% | |
| CTTAATTACCTTACATCCTA+GGG | + | chr8_3:41271342-41271361 | None:intergenic | 30.0% | |
| ACTTAATTACCTTACATCCT+AGG | + | chr8_3:41271343-41271362 | None:intergenic | 30.0% | |
| TCATTAGATCATTTGTAGCA+AGG | - | chr8_3:41271422-41271441 | Msa1288390:intron | 30.0% | |
| TTTGATTAGAATAGCATGGA+GGG | + | chr8_3:41271485-41271504 | None:intergenic | 30.0% | |
| TTCCTTTGATTAGAATAGCA+TGG | + | chr8_3:41271489-41271508 | None:intergenic | 30.0% | |
| AAGCACATACAGTATGTAAT+AGG | - | chr8_3:41271709-41271728 | Msa1288390:intron | 30.0% | |
| AGCACATACAGTATGTAATA+GGG | - | chr8_3:41271710-41271729 | Msa1288390:intron | 30.0% | |
| CCATCAACAAATAAAAGGTT+TGG | + | chr8_3:41272235-41272254 | None:intergenic | 30.0% | |
| !! | CCAAACCTTTTATTTGTTGA+TGG | - | chr8_3:41272232-41272251 | Msa1288390:intron | 30.0% |
| !! | AACCTTTTATTTGTTGATGG+GGG | - | chr8_3:41272235-41272254 | Msa1288390:intron | 30.0% |
| AGCTAGTTGTTTATCAAAAC+AGG | + | chr8_3:41272282-41272301 | None:intergenic | 30.0% | |
| TGAAATAAGCTAATCCAAAC+AGG | - | chr8_3:41272515-41272534 | Msa1288390:intron | 30.0% | |
| ! | AGCTTATGGAGCTATATTTT+TGG | - | chr8_3:41272551-41272570 | Msa1288390:intron | 30.0% |
| ATTAAACAGATACACATCTC+AGG | + | chr8_3:41272630-41272649 | None:intergenic | 30.0% | |
| !! | CAAAAAGCACTGTCAATATA+AGG | + | chr8_3:41272833-41272852 | None:intergenic | 30.0% |
| AGACTAAAGATAAGTCATTC+AGG | + | chr8_3:41272911-41272930 | None:intergenic | 30.0% | |
| GAAGAAGAAGAAGGTTGAAA+GGG | + | chr8_3:41267778-41267797 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGGTTGAA+AGG | + | chr8_3:41267779-41267798 | None:intergenic | 35.0% | |
| AAAGGAGAGAGAAGAGAAAA+AGG | + | chr8_3:41267859-41267878 | None:intergenic | 35.0% | |
| !! | GGTGTTGTTACTATAGTCTT+CGG | - | chr8_3:41268324-41268343 | Msa1288390:intron | 35.0% |
| AAAAACAGATTCGAGACTTG+TGG | + | chr8_3:41268373-41268392 | None:intergenic | 35.0% | |
| !! | CAAGTCTCGAATCTGTTTTT+AGG | - | chr8_3:41268373-41268392 | Msa1288390:intron | 35.0% |
| ! | TCCTCAAATGTGTTTTTCGT+TGG | - | chr8_3:41268408-41268427 | Msa1288390:intron | 35.0% |
| ACCAACGAAAAACACATTTG+AGG | + | chr8_3:41268412-41268431 | None:intergenic | 35.0% | |
| ! | TTTTAGTCCCTGAATGTGTA+AGG | + | chr8_3:41268519-41268538 | None:intergenic | 35.0% |
| GTGAAGAATTTCCTCGAAAA+CGG | - | chr8_3:41268770-41268789 | Msa1288390:intron | 35.0% | |
| ! | GATAAGCTTTACTTTCTGGT+CGG | + | chr8_3:41268844-41268863 | None:intergenic | 35.0% |
| AAAAGACCATAAAGATCCTG+AGG | - | chr8_3:41268987-41269006 | Msa1288390:intron | 35.0% | |
| AGAATTCCTCAGGATCTTTA+TGG | + | chr8_3:41268996-41269015 | None:intergenic | 35.0% | |
| ! | TTCTTTTCATGATTGCACCA+TGG | - | chr8_3:41269056-41269075 | Msa1288390:intron | 35.0% |
| AAGAGAATTGCAAAAGCAGT+TGG | - | chr8_3:41269135-41269154 | Msa1288390:intron | 35.0% | |
| AGAGAATTGCAAAAGCAGTT+GGG | - | chr8_3:41269136-41269155 | Msa1288390:intron | 35.0% | |
| TCAAGATTCAACTAAACACC+GGG | - | chr8_3:41269180-41269199 | Msa1288390:intron | 35.0% | |
| CAACATAATCACAATGGAGT+CGG | + | chr8_3:41269269-41269288 | None:intergenic | 35.0% | |
| ! | TAGGTTTTCCCAAGAAACTT+TGG | - | chr8_3:41269358-41269377 | Msa1288390:intron | 35.0% |
| ACTTCGTTATCCAATGATGT+AGG | + | chr8_3:41269476-41269495 | None:intergenic | 35.0% | |
| TAATCAAGTCTGGCCATATT+GGG | + | chr8_3:41269523-41269542 | None:intergenic | 35.0% | |
| ATAATCAAGTCTGGCCATAT+TGG | + | chr8_3:41269524-41269543 | None:intergenic | 35.0% | |
| AACTGAATAAGATCCACACA+GGG | + | chr8_3:41269547-41269566 | None:intergenic | 35.0% | |
| TAACTGAATAAGATCCACAC+AGG | + | chr8_3:41269548-41269567 | None:intergenic | 35.0% | |
| ! | AAGGGCAATGACATTTTACA+AGG | - | chr8_3:41269691-41269710 | Msa1288390:intron | 35.0% |
| ! | GTAATTCTGAAGAACTAGAG+GGG | - | chr8_3:41269725-41269744 | Msa1288390:intron | 35.0% |
| ! | TAATTCTGAAGAACTAGAGG+GGG | - | chr8_3:41269726-41269745 | Msa1288390:intron | 35.0% |
| ATGTTGGATAAAGCCTTTCT+TGG | + | chr8_3:41269880-41269899 | None:intergenic | 35.0% | |
| TAGATATTAAGACACCGCTT+AGG | - | chr8_3:41269920-41269939 | Msa1288390:intron | 35.0% | |
| TGATTTATCGTATCAGTTGG+TGG | + | chr8_3:41270105-41270124 | None:intergenic | 35.0% | |
| ACCAACTGATACGATAAATC+AGG | - | chr8_3:41270104-41270123 | Msa1288390:intron | 35.0% | |
| TCCTGATTTATCGTATCAGT+TGG | + | chr8_3:41270108-41270127 | None:intergenic | 35.0% | |
| !! | TATTGTTGGTTCTAGTAAGC+CGG | - | chr8_3:41270134-41270153 | Msa1288390:intron | 35.0% |
| ATTGAAGATGTTATTGCTGC+TGG | - | chr8_3:41270180-41270199 | Msa1288390:CDS | 35.0% | |
| TGGTGAGACAAATACAATTC+TGG | - | chr8_3:41270200-41270219 | Msa1288390:CDS | 35.0% | |
| AGTCCATGGTGAATAATTCA+AGG | - | chr8_3:41270364-41270383 | Msa1288390:CDS | 35.0% | |
| GTCCATGGTGAATAATTCAA+GGG | - | chr8_3:41270365-41270384 | Msa1288390:CDS | 35.0% | |
| TTCCCTTGAATTATTCACCA+TGG | + | chr8_3:41270370-41270389 | None:intergenic | 35.0% | |
| ATATCTACATCCATGTCAAC+AGG | + | chr8_3:41270429-41270448 | None:intergenic | 35.0% | |
| GTTGACATGGATGTAGATAT+TGG | - | chr8_3:41270429-41270448 | Msa1288390:CDS | 35.0% | |
| AGAGTTATGGATGACATAGT+AGG | - | chr8_3:41270471-41270490 | Msa1288390:CDS | 35.0% | |
| TTATGGATGACATAGTAGGA+AGG | - | chr8_3:41270475-41270494 | Msa1288390:CDS | 35.0% | |
| TTCACATTTGCATCATCTGT+TGG | + | chr8_3:41270667-41270686 | None:intergenic | 35.0% | |
| AGATGATGCAAATGTGAACT+TGG | - | chr8_3:41270669-41270688 | Msa1288390:CDS | 35.0% | |
| TTATCTCTTGAATACGTAGC+TGG | - | chr8_3:41270769-41270788 | Msa1288390:CDS | 35.0% | |
| AAGTGAGTTAGTGACATCAA+AGG | + | chr8_3:41270934-41270953 | None:intergenic | 35.0% | |
| AAGCCAATTCTATGGACAAA+AGG | - | chr8_3:41271004-41271023 | Msa1288390:intron | 35.0% | |
| ! | AGACCTTTTGTCCATAGAAT+TGG | + | chr8_3:41271010-41271029 | None:intergenic | 35.0% |
| AATTCTATGGACAAAAGGTC+TGG | - | chr8_3:41271009-41271028 | Msa1288390:intron | 35.0% | |
| AAAGAAAACCAGCAAAAGCT+AGG | + | chr8_3:41271072-41271091 | None:intergenic | 35.0% | |
| !!! | GTTTATTTTCTGGAATGGGT+AGG | - | chr8_3:41271385-41271404 | Msa1288390:intron | 35.0% |
| ATGGAGGGAACTTAAAGTTT+GGG | + | chr8_3:41271470-41271489 | None:intergenic | 35.0% | |
| CTTTGATTAGAATAGCATGG+AGG | + | chr8_3:41271486-41271505 | None:intergenic | 35.0% | |
| CTCCATGCTATTCTAATCAA+AGG | - | chr8_3:41271484-41271503 | Msa1288390:CDS | 35.0% | |
| ATATTGGAAAGGGGAAAGAA+TGG | - | chr8_3:41272147-41272166 | Msa1288390:intron | 35.0% | |
| !! | ACCTTTTATTTGTTGATGGG+GGG | - | chr8_3:41272236-41272255 | Msa1288390:intron | 35.0% |
| CAAGTGCTTATGTATAAGCT+TGG | - | chr8_3:41272325-41272344 | Msa1288390:intron | 35.0% | |
| GCTTATTTCAGCTTATCTAC+AGG | + | chr8_3:41272505-41272524 | None:intergenic | 35.0% | |
| !!! | GGAGCTATATTTTTGGACTT+TGG | - | chr8_3:41272558-41272577 | Msa1288390:intron | 35.0% |
| AATGACTTCACCTTCATGTT+TGG | + | chr8_3:41272772-41272791 | None:intergenic | 35.0% | |
| AAACATCCAGAATTCAGCAA+TGG | - | chr8_3:41272988-41273007 | Msa1288390:five_prime_UTR | 35.0% | |
| TTCATACCATTGCTGAATTC+TGG | + | chr8_3:41272997-41273016 | None:intergenic | 35.0% | |
| GATCCTATCGCAAACTATTC+TGG | - | chr8_3:41267727-41267746 | Msa1288390:three_prime_UTR | 40.0% | |
| ! | AGACCAGAATAGTTTGCGAT+AGG | + | chr8_3:41267733-41267752 | None:intergenic | 40.0% |
| GGATTGGAAGAAGAAGAAGA+AGG | + | chr8_3:41267787-41267806 | None:intergenic | 40.0% | |
| ! | GGATCTGAGATTGTTGTGAA+TGG | + | chr8_3:41267827-41267846 | None:intergenic | 40.0% |
| TCACAACAATCTCAGATCCA+TGG | - | chr8_3:41267828-41267847 | Msa1288390:exon | 40.0% | |
| AAGAGAAAAAGGAGCTACCA+TGG | + | chr8_3:41267848-41267867 | None:intergenic | 40.0% | |
| CGAGCAATGCTTGTGAAATT+TGG | + | chr8_3:41267894-41267913 | None:intergenic | 40.0% | |
| TGTTGGGGTAATTGAAATGG+TGG | - | chr8_3:41268091-41268110 | Msa1288390:intron | 40.0% | |
| ! | GGTGGTTAGTTACGAGAAAT+TGG | - | chr8_3:41268109-41268128 | Msa1288390:intron | 40.0% |
| CGCACATTCAGAGACTAAAA+TGG | + | chr8_3:41268303-41268322 | None:intergenic | 40.0% | |
| ! | TTTTAGTCTCTGAATGTGCG+AGG | - | chr8_3:41268303-41268322 | Msa1288390:intron | 40.0% |
| TGACAATGCCTTACACATTC+AGG | - | chr8_3:41268508-41268527 | Msa1288390:CDS | 40.0% | |
| GACAATGCCTTACACATTCA+GGG | - | chr8_3:41268509-41268528 | Msa1288390:CDS | 40.0% | |
| !! | TGATGTTTTTGCTGTGGAAG+AGG | - | chr8_3:41268747-41268766 | Msa1288390:CDS | 40.0% |
| !! | GATGTTTTTGCTGTGGAAGA+GGG | - | chr8_3:41268748-41268767 | Msa1288390:CDS | 40.0% |
| GGTAACAAATCCTCAACAGA+GGG | + | chr8_3:41268955-41268974 | None:intergenic | 40.0% | |
| ! | TGGTCTTTTATGTCCAGACT+CGG | + | chr8_3:41268976-41268995 | None:intergenic | 40.0% |
| AGATCCTGAGGAATTCTTCT+TGG | - | chr8_3:41268999-41269018 | Msa1288390:intron | 40.0% | |
| AATTCTTCTTGGCCCATGAA+CGG | - | chr8_3:41269010-41269029 | Msa1288390:intron | 40.0% | |
| !! | CTGCTTTTGCAATTCTCTTC+TGG | + | chr8_3:41269134-41269153 | None:intergenic | 40.0% |
| GTCTTCATGTTATATTGGCC+AGG | - | chr8_3:41269318-41269337 | Msa1288390:intron | 40.0% | |
| ATGTCTGTATTTAACTGGCC+TGG | + | chr8_3:41269339-41269358 | None:intergenic | 40.0% | |
| GGCCAGTTAAATACAGACAT+AGG | - | chr8_3:41269339-41269358 | Msa1288390:intron | 40.0% | |
| TCATTGGATAACGAAGTAGC+TGG | - | chr8_3:41269479-41269498 | Msa1288390:intron | 40.0% | |
| ! | GAACGCATCTTTTCCCAATA+TGG | - | chr8_3:41269507-41269526 | Msa1288390:intron | 40.0% |
| CAAACGATCTTAATTGTGGC+AGG | - | chr8_3:41269646-41269665 | Msa1288390:CDS | 40.0% | |
| ! | CAATGAATCTTTTGCAGGAG+AGG | - | chr8_3:41269755-41269774 | Msa1288390:intron | 40.0% |
| GATCAATCGGTTGGATATCT+GGG | + | chr8_3:41269828-41269847 | None:intergenic | 40.0% | |
| AGATCAATCGGTTGGATATC+TGG | + | chr8_3:41269829-41269848 | None:intergenic | 40.0% | |
| GAATTCGTCAAAGCCAAGAA+AGG | - | chr8_3:41269864-41269883 | Msa1288390:intron | 40.0% | |
| ATATTAAGACACCGCTTAGG+CGG | - | chr8_3:41269923-41269942 | Msa1288390:intron | 40.0% | |
| GCTGAAAATGGATCTACTGA+TGG | + | chr8_3:41270048-41270067 | None:intergenic | 40.0% | |
| ! | GGACACTTCTGAAAAATCCA+AGG | - | chr8_3:41270221-41270240 | Msa1288390:CDS | 40.0% |
| AATCCAAGGAAGAAGATTCG+AGG | - | chr8_3:41270235-41270254 | Msa1288390:CDS | 40.0% | |
| ! | GTACTGATGCAATTTCTGAC+AGG | + | chr8_3:41270336-41270355 | None:intergenic | 40.0% |
| CAGTACTCTTCAAAAGTCCA+TGG | - | chr8_3:41270350-41270369 | Msa1288390:intron | 40.0% | |
| AAATGAACCTCCTGTTGACA+TGG | - | chr8_3:41270416-41270435 | Msa1288390:CDS | 40.0% | |
| GACATGGATGTAGATATTGG+AGG | - | chr8_3:41270432-41270451 | Msa1288390:CDS | 40.0% | |
| TGGTATGGGAAAGAGAGTTA+TGG | - | chr8_3:41270458-41270477 | Msa1288390:CDS | 40.0% | |
| !! | TCGGATTGGTAAGGTTCATT+TGG | + | chr8_3:41270513-41270532 | None:intergenic | 40.0% |
| AAATGAACCTTACCAATCCG+AGG | - | chr8_3:41270512-41270531 | Msa1288390:intron | 40.0% | |
| AGTCTCTGTTCCACTAAGAA+AGG | + | chr8_3:41270795-41270814 | None:intergenic | 40.0% | |
| ATGCAATGAACTCTGTACAC+AGG | - | chr8_3:41270855-41270874 | Msa1288390:CDS | 40.0% | |
| TGGAGGGAACTTAAAGTTTG+GGG | + | chr8_3:41271469-41271488 | None:intergenic | 40.0% | |
| CATGGAGGGAACTTAAAGTT+TGG | + | chr8_3:41271471-41271490 | None:intergenic | 40.0% | |
| GTATGTGCTTTAGCATGATC+TGG | + | chr8_3:41271699-41271718 | None:intergenic | 40.0% | |
| ! | CTAGATGTTGGTCTGATTGA+TGG | - | chr8_3:41271807-41271826 | Msa1288390:intron | 40.0% |
| TTTGCCTGTATCAGAAGACA+GGG | + | chr8_3:41271873-41271892 | None:intergenic | 40.0% | |
| ! | ACTCTCTTTTGCCCATTAAG+AGG | + | chr8_3:41271915-41271934 | None:intergenic | 40.0% |
| ! | ATGAGAAGTACAAACCTGCA+AGG | + | chr8_3:41271995-41272014 | None:intergenic | 40.0% |
| TATCGTATCTTTCCAGATGC+TGG | - | chr8_3:41272067-41272086 | Msa1288390:intron | 40.0% | |
| TAAGGAGAAGCAAAAGGTTC+AGG | - | chr8_3:41272110-41272129 | Msa1288390:intron | 40.0% | |
| !! | AGGCCTTTGGAATATTGGAA+AGG | - | chr8_3:41272136-41272155 | Msa1288390:intron | 40.0% |
| !! | GGCCTTTGGAATATTGGAAA+GGG | - | chr8_3:41272137-41272156 | Msa1288390:intron | 40.0% |
| !! | GCCTTTGGAATATTGGAAAG+GGG | - | chr8_3:41272138-41272157 | Msa1288390:intron | 40.0% |
| TCCCCTTTCCAATATTCCAA+AGG | + | chr8_3:41272142-41272161 | None:intergenic | 40.0% | |
| AAAGGGGAAAGAATGGTGTA+TGG | - | chr8_3:41272154-41272173 | Msa1288390:intron | 40.0% | |
| TGTACTCACTCTCATGTACA+CGG | + | chr8_3:41272180-41272199 | None:intergenic | 40.0% | |
| !! | CCTTTTATTTGTTGATGGGG+GGG | - | chr8_3:41272237-41272256 | Msa1288390:intron | 40.0% |
| TCCATAAGCTTCACCTCTAT+GGG | + | chr8_3:41272541-41272560 | None:intergenic | 40.0% | |
| AACAGATACACATCTCAGGT+GGG | + | chr8_3:41272626-41272645 | None:intergenic | 40.0% | |
| AAACAGATACACATCTCAGG+TGG | + | chr8_3:41272627-41272646 | None:intergenic | 40.0% | |
| ATTACACACGTGCTTACTGT+AGG | - | chr8_3:41272671-41272690 | Msa1288390:intron | 40.0% | |
| ! | CAGGTTTGAGTACTGTCATT+GGG | - | chr8_3:41272713-41272732 | Msa1288390:intron | 40.0% |
| ! | AGGTTTGAGTACTGTCATTG+GGG | - | chr8_3:41272714-41272733 | Msa1288390:intron | 40.0% |
| TGATGGGAAACCAAACATGA+AGG | - | chr8_3:41272759-41272778 | Msa1288390:intron | 40.0% | |
| ATTTCCTCGAAAACGGAGAC+CGG | - | chr8_3:41268777-41268796 | Msa1288390:intron | 45.0% | |
| CGGTAACAAATCCTCAACAG+AGG | + | chr8_3:41268956-41268975 | None:intergenic | 45.0% | |
| !! | TGAGGATTTGTTACCGAGTC+TGG | - | chr8_3:41268960-41268979 | Msa1288390:intron | 45.0% |
| CAGGACTTCCAGGGTTTAAT+CGG | - | chr8_3:41269212-41269231 | Msa1288390:intron | 45.0% | |
| AGGACTTCCAGGGTTTAATC+GGG | - | chr8_3:41269213-41269232 | Msa1288390:intron | 45.0% | |
| GTCAGATTCAAACGCCTCTT+GGG | + | chr8_3:41269408-41269427 | None:intergenic | 45.0% | |
| TGTCAGATTCAAACGCCTCT+TGG | + | chr8_3:41269409-41269428 | None:intergenic | 45.0% | |
| GTGTCAGTGTTATCACCAAC+AGG | + | chr8_3:41269440-41269459 | None:intergenic | 45.0% | |
| !! | GTTGGTGATAACACTGACAC+AGG | - | chr8_3:41269440-41269459 | Msa1288390:intron | 45.0% |
| CGATGCTTCACCTACATCAT+TGG | - | chr8_3:41269463-41269482 | Msa1288390:intron | 45.0% | |
| CACACAGGGATAATCAAGTC+TGG | + | chr8_3:41269533-41269552 | None:intergenic | 45.0% | |
| CAGACTTGATTATCCCTGTG+TGG | - | chr8_3:41269531-41269550 | Msa1288390:intron | 45.0% | |
| ACCAGCTGTTGAAGAGAACA+AGG | - | chr8_3:41269672-41269691 | Msa1288390:CDS | 45.0% | |
| CCAGCTGTTGAAGAGAACAA+GGG | - | chr8_3:41269673-41269692 | Msa1288390:CDS | 45.0% | |
| ! | TGGCGCAATGAATCTTTTGC+AGG | - | chr8_3:41269750-41269769 | Msa1288390:intron | 45.0% |
| AGGACTTCAGATCAATCGGT+TGG | + | chr8_3:41269837-41269856 | None:intergenic | 45.0% | |
| CGCAAGGACTTCAGATCAAT+CGG | + | chr8_3:41269841-41269860 | None:intergenic | 45.0% | |
| CTTTGACGAATTCTCTCGCA+AGG | + | chr8_3:41269857-41269876 | None:intergenic | 45.0% | |
| TATTAAGACACCGCTTAGGC+GGG | - | chr8_3:41269924-41269943 | Msa1288390:intron | 45.0% | |
| ! | GAAGCAAATGGACTTCTTGG+TGG | + | chr8_3:41269988-41270007 | None:intergenic | 45.0% |
| ! | AGCGAAGCAAATGGACTTCT+TGG | + | chr8_3:41269991-41270010 | None:intergenic | 45.0% |
| CATCCTCGAATCTTCTTCCT+TGG | + | chr8_3:41270241-41270260 | None:intergenic | 45.0% | |
| TCTACATCCATGTCAACAGG+AGG | + | chr8_3:41270426-41270445 | None:intergenic | 45.0% | |
| GATGTAGATATTGGAGGCAG+TGG | - | chr8_3:41270438-41270457 | Msa1288390:CDS | 45.0% | |
| AGATATTGGAGGCAGTGGTA+TGG | - | chr8_3:41270443-41270462 | Msa1288390:CDS | 45.0% | |
| GATATTGGAGGCAGTGGTAT+GGG | - | chr8_3:41270444-41270463 | Msa1288390:CDS | 45.0% | |
| AACATACGTTGTCCTCGGAT+TGG | + | chr8_3:41270527-41270546 | None:intergenic | 45.0% | |
| CAGGTAACATACGTTGTCCT+CGG | + | chr8_3:41270532-41270551 | None:intergenic | 45.0% | |
| ! | GTGAACTTGGTGATTCCACT+AGG | - | chr8_3:41270682-41270701 | Msa1288390:CDS | 45.0% |
| CGAGCATCAAGCCAATTCTA+TGG | - | chr8_3:41270996-41271015 | Msa1288390:intron | 45.0% | |
| AGGTCTGGAAGATCCATTGA+TGG | - | chr8_3:41271024-41271043 | Msa1288390:intron | 45.0% | |
| ! | ACTCTGTTCTGGACCATCAA+TGG | + | chr8_3:41271040-41271059 | None:intergenic | 45.0% |
| TGGTCCAGAACAGAGTTTAC+AGG | - | chr8_3:41271044-41271063 | Msa1288390:intron | 45.0% | |
| GGAACCTGTAAACTCTGTTC+TGG | + | chr8_3:41271051-41271070 | None:intergenic | 45.0% | |
| !! | TACAGGTTCCTAGCTTTTGC+TGG | - | chr8_3:41271061-41271080 | Msa1288390:intron | 45.0% |
| ! | ATGTGGACACGTGATGATGA+TGG | + | chr8_3:41271265-41271284 | None:intergenic | 45.0% |
| GGTCATCTTGCATGTTTCCA+CGG | - | chr8_3:41271309-41271328 | Msa1288390:CDS | 45.0% | |
| GTCATCTTGCATGTTTCCAC+GGG | - | chr8_3:41271310-41271329 | Msa1288390:CDS | 45.0% | |
| ATTACCTTACATCCTAGGGG+TGG | + | chr8_3:41271338-41271357 | None:intergenic | 45.0% | |
| GAATCCCTGTCTTCTGATAC+AGG | - | chr8_3:41271866-41271885 | Msa1288390:CDS | 45.0% | |
| GTTTGCCTGTATCAGAAGAC+AGG | + | chr8_3:41271874-41271893 | None:intergenic | 45.0% | |
| CTGATACAGGCAAACACAGT+TGG | - | chr8_3:41271879-41271898 | Msa1288390:CDS | 45.0% | |
| GTTCTGTGGCACCTCTTAAT+GGG | - | chr8_3:41271901-41271920 | Msa1288390:CDS | 45.0% | |
| !! | ATGTGCACAGAAAGTGTCCA+AGG | - | chr8_3:41271941-41271960 | Msa1288390:CDS | 45.0% |
| !! | TGTGCACAGAAAGTGTCCAA+GGG | - | chr8_3:41271942-41271961 | Msa1288390:CDS | 45.0% |
| CTGAAGTCTCTTCTTACCCT+TGG | + | chr8_3:41271961-41271980 | None:intergenic | 45.0% | |
| GTAAGAAGAGACTTCAGCAC+AGG | - | chr8_3:41271964-41271983 | Msa1288390:CDS | 45.0% | |
| TTCCAGATGCTGGTACATCA+TGG | - | chr8_3:41272077-41272096 | Msa1288390:intron | 45.0% | |
| TCCAGATGCTGGTACATCAT+GGG | - | chr8_3:41272078-41272097 | Msa1288390:intron | 45.0% | |
| CTGGAGTAAGGAGAAGCAAA+AGG | - | chr8_3:41272104-41272123 | Msa1288390:intron | 45.0% | |
| GAAGCAAAAGGTTCAGGACA+AGG | - | chr8_3:41272116-41272135 | Msa1288390:intron | 45.0% | |
| !! | GGACAAGGCCTTTGGAATAT+TGG | - | chr8_3:41272131-41272150 | Msa1288390:intron | 45.0% |
| CCCCCCCATCAACAAATAAA+AGG | + | chr8_3:41272240-41272259 | None:intergenic | 45.0% | |
| TAATCCAAACAGGCCCATAG+AGG | - | chr8_3:41272525-41272544 | Msa1288390:intron | 45.0% | |
| CTCCATAAGCTTCACCTCTA+TGG | + | chr8_3:41272542-41272561 | None:intergenic | 45.0% | |
| ! | GCAGGTTTGAGTACTGTCAT+TGG | - | chr8_3:41272712-41272731 | Msa1288390:intron | 45.0% |
| GTCGAGATCGTGAAAGGGAT+TGG | + | chr8_3:41267803-41267822 | None:intergenic | 50.0% | |
| ! | ATGGCGTCGAGATCGTGAAA+GGG | + | chr8_3:41267808-41267827 | None:intergenic | 50.0% |
| ! | AATGGCGTCGAGATCGTGAA+AGG | + | chr8_3:41267809-41267828 | None:intergenic | 50.0% |
| TCCTACTAGACTTGCAGAGC+AGG | - | chr8_3:41268657-41268676 | Msa1288390:intron | 50.0% | |
| CCTACTAGACTTGCAGAGCA+GGG | - | chr8_3:41268658-41268677 | Msa1288390:intron | 50.0% | |
| TTTCCTCGAAAACGGAGACC+GGG | - | chr8_3:41268778-41268797 | Msa1288390:intron | 50.0% | |
| ATTTGACAGGCCCTCTGTTG+AGG | - | chr8_3:41268942-41268961 | Msa1288390:intron | 50.0% | |
| TGGGCCAAGAAGAATTCCTC+AGG | + | chr8_3:41269006-41269025 | None:intergenic | 50.0% | |
| CGATTAAACCCTGGAAGTCC+TGG | + | chr8_3:41269214-41269233 | None:intergenic | 50.0% | |
| GGACTTCCAGGGTTTAATCG+GGG | - | chr8_3:41269214-41269233 | Msa1288390:intron | 50.0% | |
| GACTTCCAGGGTTTAATCGG+GGG | - | chr8_3:41269215-41269234 | Msa1288390:intron | 50.0% | |
| TGATGTCCTATCCTCCCAAG+AGG | - | chr8_3:41269391-41269410 | Msa1288390:intron | 50.0% | |
| AGATTCAAACGCCTCTTGGG+AGG | + | chr8_3:41269405-41269424 | None:intergenic | 50.0% | |
| TCTGACACTCTCGATCCTGT+TGG | - | chr8_3:41269422-41269441 | Msa1288390:intron | 50.0% | |
| CCCTTGTTCTCTTCAACAGC+TGG | + | chr8_3:41269676-41269695 | None:intergenic | 50.0% | |
| TCTGAAGAACTAGAGGGGGA+TGG | - | chr8_3:41269730-41269749 | Msa1288390:intron | 50.0% | |
| GGTTGGATATCTGGGAAGTC+TGG | + | chr8_3:41269820-41269839 | None:intergenic | 50.0% | |
| GGGTACACTGAGAAGCAGTT+AGG | - | chr8_3:41269952-41269971 | Msa1288390:intron | 50.0% | |
| !! | AATGGACTTCTTGGTGGCGT+GGG | + | chr8_3:41269982-41270001 | None:intergenic | 50.0% |
| !! | AAATGGACTTCTTGGTGGCG+TGG | + | chr8_3:41269983-41270002 | None:intergenic | 50.0% |
| !! | ACGTTGTCCTCGGATTGGTA+AGG | + | chr8_3:41270522-41270541 | None:intergenic | 50.0% |
| !! | ACGTAGCTGGCCTTTCTTAG+TGG | - | chr8_3:41270782-41270801 | Msa1288390:CDS | 50.0% |
| !! | GGCAAACACAGTTGGTTCTG+TGG | - | chr8_3:41271887-41271906 | Msa1288390:CDS | 50.0% |
| GGTTCTGTGGCACCTCTTAA+TGG | - | chr8_3:41271900-41271919 | Msa1288390:CDS | 50.0% | |
| TCCCATGATGTACCAGCATC+TGG | + | chr8_3:41272082-41272101 | None:intergenic | 50.0% | |
| ! | CATCATGGGAGTCTGGAGTA+AGG | - | chr8_3:41272092-41272111 | Msa1288390:intron | 50.0% |
| AAGGTTCAGGACAAGGCCTT+TGG | - | chr8_3:41272123-41272142 | Msa1288390:intron | 50.0% | |
| ! | GGGGACGTGTCATTAGACTA+GGG | - | chr8_3:41272256-41272275 | Msa1288390:intron | 50.0% |
| TTCACCTCTATGGGCCTGTT+TGG | + | chr8_3:41272532-41272551 | None:intergenic | 50.0% | |
| GCCCATAGAGGTGAAGCTTA+TGG | - | chr8_3:41272537-41272556 | Msa1288390:intron | 50.0% | |
| ! | GCTTTTCTCCAGGAGGTGAT+GGG | - | chr8_3:41272743-41272762 | Msa1288390:intron | 50.0% |
| ! | TTTGGTTTCCCATCACCTCC+TGG | + | chr8_3:41272754-41272773 | None:intergenic | 50.0% |
| CCCTGCTCTGCAAGTCTAGT+AGG | + | chr8_3:41268661-41268680 | None:intergenic | 55.0% | |
| ! | AAACCCGGTCTCCGTTTTCG+AGG | + | chr8_3:41268784-41268803 | None:intergenic | 55.0% |
| CGAAAACGGAGACCGGGTTT+AGG | - | chr8_3:41268784-41268803 | Msa1288390:intron | 55.0% | |
| GCACGATTGAGGCCTAAACC+CGG | + | chr8_3:41268799-41268818 | None:intergenic | 55.0% | |
| ! | GTCGGCTTAAGCGAGAAACG+CGG | + | chr8_3:41268826-41268845 | None:intergenic | 55.0% |
| TCTTCTTGGCCCATGAACGG+CGG | - | chr8_3:41269013-41269032 | Msa1288390:intron | 55.0% | |
| CTTACTCTCCCGCCGTTCAT+GGG | + | chr8_3:41269025-41269044 | None:intergenic | 55.0% | |
| ACTTACTCTCCCGCCGTTCA+TGG | + | chr8_3:41269026-41269045 | None:intergenic | 55.0% | |
| ! | CAGGGTTTAATCGGGGGTAC+CGG | - | chr8_3:41269221-41269240 | Msa1288390:intron | 55.0% |
| CAAACGCCTCTTGGGAGGAT+AGG | + | chr8_3:41269400-41269419 | None:intergenic | 55.0% | |
| TACCCTACATCCCGCCTAAG+CGG | + | chr8_3:41269937-41269956 | None:intergenic | 55.0% | |
| !! | ATGGACTTCTTGGTGGCGTG+GGG | + | chr8_3:41269981-41270000 | None:intergenic | 55.0% |
| !! | GTTGGTTCTAGTAAGCCGGC+AGG | - | chr8_3:41270138-41270157 | Msa1288390:CDS | 55.0% |
| GCTGGTACATCATGGGAGTC+TGG | - | chr8_3:41272085-41272104 | Msa1288390:intron | 55.0% | |
| ! | GGGGGACGTGTCATTAGACT+AGG | - | chr8_3:41272255-41272274 | Msa1288390:intron | 55.0% |
| !! | GTGAAGCGCTTTTCTCCAGG+AGG | - | chr8_3:41272736-41272755 | Msa1288390:intron | 55.0% |
| ! | CGCTTTTCTCCAGGAGGTGA+TGG | - | chr8_3:41272742-41272761 | Msa1288390:intron | 55.0% |
| AACGCGGACGTGCACGATTG+AGG | + | chr8_3:41268810-41268829 | None:intergenic | 60.0% | |
| CTTCTTGGCCCATGAACGGC+GGG | - | chr8_3:41269014-41269033 | Msa1288390:intron | 60.0% | |
| !! | AGCGTCGACCAGGACTTCCA+GGG | - | chr8_3:41269203-41269222 | Msa1288390:intron | 60.0% |
| CGGTACCCCCGATTAAACCC+TGG | + | chr8_3:41269223-41269242 | None:intergenic | 60.0% | |
| ACACCGCTTAGGCGGGATGT+AGG | - | chr8_3:41269931-41269950 | Msa1288390:intron | 60.0% | |
| CACCGCTTAGGCGGGATGTA+GGG | - | chr8_3:41269932-41269951 | Msa1288390:intron | 60.0% | |
| !! | TGGACTTCTTGGTGGCGTGG+GGG | + | chr8_3:41269980-41269999 | None:intergenic | 60.0% |
| GGCTCCACCCCTAGGATGTA+AGG | - | chr8_3:41271331-41271350 | Msa1288390:intron | 60.0% | |
| CAGCACAGGATGAGCCTTGC+AGG | - | chr8_3:41271978-41271997 | Msa1288390:CDS | 60.0% | |
| !! | GGGGTGAAGCGCTTTTCTCC+AGG | - | chr8_3:41272733-41272752 | Msa1288390:intron | 60.0% |
| !! | AAACACCGGGAGCGTCGACC+AGG | - | chr8_3:41269193-41269212 | Msa1288390:intron | 65.0% |
| GAAGTCCTGGTCGACGCTCC+CGG | + | chr8_3:41269201-41269220 | None:intergenic | 65.0% | |
| !! | GAGCGTCGACCAGGACTTCC+AGG | - | chr8_3:41269202-41269221 | Msa1288390:intron | 65.0% |
| GGTGCACTCAGCTCACCTGC+CGG | + | chr8_3:41270156-41270175 | None:intergenic | 65.0% | |
| TTTCCACGGGCTCCACCCCT+AGG | - | chr8_3:41271323-41271342 | Msa1288390:intron | 65.0% | |
| CATCCTAGGGGTGGAGCCCG+TGG | + | chr8_3:41271329-41271348 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 41267652 | 41273023 | 41267652 | ID=Msa1288390;Name=Msa1288390 |
| chr8_3 | mRNA | 41267652 | 41273023 | 41267652 | ID=Msa1288390-mRNA-1;Parent=Msa1288390;Name=Msa1288390-mRNA-1;_AED=0.06;_eAED=0.06;_QI=48|0.76|0.71|1|0.69|0.71|14|183|692 |
| chr8_3 | exon | 41267652 | 41267959 | 41267652 | ID=Msa1288390-mRNA-1:exon:11315;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41268485 | 41268592 | 41268485 | ID=Msa1288390-mRNA-1:exon:11314;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41268676 | 41268787 | 41268676 | ID=Msa1288390-mRNA-1:exon:11313;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41269610 | 41269707 | 41269610 | ID=Msa1288390-mRNA-1:exon:11312;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41269972 | 41270047 | 41269972 | ID=Msa1288390-mRNA-1:exon:11311;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41270136 | 41270350 | 41270136 | ID=Msa1288390-mRNA-1:exon:11310;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41270357 | 41270515 | 41270357 | ID=Msa1288390-mRNA-1:exon:11309;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41270528 | 41270757 | 41270528 | ID=Msa1288390-mRNA-1:exon:11308;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41270767 | 41271007 | 41270767 | ID=Msa1288390-mRNA-1:exon:11307;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41271175 | 41271335 | 41271175 | ID=Msa1288390-mRNA-1:exon:11306;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41271439 | 41271547 | 41271439 | ID=Msa1288390-mRNA-1:exon:11305;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41271636 | 41271724 | 41271636 | ID=Msa1288390-mRNA-1:exon:11304;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41271824 | 41272029 | 41271824 | ID=Msa1288390-mRNA-1:exon:11303;Parent=Msa1288390-mRNA-1 |
| chr8_3 | exon | 41272826 | 41273023 | 41272826 | ID=Msa1288390-mRNA-1:exon:11302;Parent=Msa1288390-mRNA-1 |
| chr8_3 | five_prime_UTR | 41272976 | 41273023 | 41272976 | ID=Msa1288390-mRNA-1:five_prime_utr;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41272826 | 41272975 | 41272826 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41271824 | 41272029 | 41271824 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41271636 | 41271724 | 41271636 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41271439 | 41271547 | 41271439 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41271175 | 41271335 | 41271175 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41270767 | 41271007 | 41270767 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41270528 | 41270757 | 41270528 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41270357 | 41270515 | 41270357 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41270136 | 41270350 | 41270136 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41269972 | 41270047 | 41269972 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41269610 | 41269707 | 41269610 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41268676 | 41268787 | 41268676 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41268485 | 41268592 | 41268485 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | CDS | 41267835 | 41267959 | 41267835 | ID=Msa1288390-mRNA-1:cds;Parent=Msa1288390-mRNA-1 |
| chr8_3 | three_prime_UTR | 41267652 | 41267834 | 41267652 | ID=Msa1288390-mRNA-1:three_prime_utr;Parent=Msa1288390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
