AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1288790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1288790 MtrunA17_Chr8g0362231 90.138 436 24 1 1 417 1 436 0.0 806
Msa1288790 MtrunA17_Chr5g0416341 51.064 470 161 16 1 413 6 463 4.69e-140 408
Msa1288790 MtrunA17_Chr7g0238631 41.837 98 37 2 25 102 116 213 9.60e-17 82.4
Msa1288790 MtrunA17_Chr1g0157731 34.694 98 45 1 25 103 94 191 3.31e-14 74.7
Msa1288790 MtrunA17_Chr1g0209661 33.577 137 68 3 1 116 10 144 3.99e-14 72.8
Msa1288790 MtrunA17_Chr7g0228401 34.454 119 72 2 36 150 312 428 7.55e-14 73.2
Msa1288790 MtrunA17_Chr3g0139671 42.254 71 41 0 33 103 115 185 1.08e-13 73.2
Msa1288790 MtrunA17_Chr2g0330041 27.193 228 126 5 10 205 2 221 1.48e-13 72.0
Msa1288790 MtrunA17_Chr7g0228231 35.780 109 50 1 25 113 19 127 3.24e-13 68.6
Msa1288790 MtrunA17_Chr3g0103281 28.889 180 98 4 25 183 17 187 9.71e-13 68.9
Msa1288790 MtrunA17_Chr5g0397841 35.870 92 40 1 24 96 112 203 1.05e-12 69.7
Msa1288790 MtrunA17_Chr6g0450101 36.634 101 44 1 25 105 19 119 1.31e-12 66.6
Msa1288790 MtrunA17_Chr4g0058991 33.333 117 58 2 25 121 212 328 1.37e-12 69.3
Msa1288790 MtrunA17_Chr1g0167661 32.773 119 56 2 25 119 17 135 3.49e-12 66.2
Msa1288790 MtrunA17_Chr8g0349261 37.000 100 42 2 25 103 18 117 3.78e-12 66.6
Msa1288790 MtrunA17_Chr1g0168661 33.945 109 52 1 25 113 26 134 5.47e-12 65.9
Msa1288790 MtrunA17_Chr3g0117511 32.653 98 47 1 25 103 186 283 6.00e-12 67.0
Msa1288790 MtrunA17_Chr7g0228531 32.500 120 61 3 4 103 200 319 7.63e-12 66.6
Msa1288790 MtrunA17_Chr3g0135311 36.000 100 43 1 25 103 17 116 8.59e-12 66.2
Msa1288790 MtrunA17_Chr1g0177901 42.466 73 40 1 43 115 34 104 1.23e-11 63.9
Msa1288790 MtrunA17_Chr2g0309911 34.343 99 45 1 25 103 16 114 1.30e-11 65.5
Msa1288790 MtrunA17_Chr4g0044421 35.455 110 50 2 24 112 16 125 1.36e-11 63.5
Msa1288790 MtrunA17_Chr5g0401731 33.333 105 50 2 25 109 18 122 1.81e-11 65.1
Msa1288790 MtrunA17_Chr1g0193371 31.579 114 57 2 25 117 17 130 1.90e-11 65.1
Msa1288790 MtrunA17_Chr1g0186061 34.862 109 51 1 25 113 25 133 3.12e-11 63.5
Msa1288790 MtrunA17_Chr7g0233061 37.931 87 53 1 31 117 206 291 3.22e-11 64.3
Msa1288790 MtrunA17_Chr3g0121241 35.849 106 47 2 25 109 47 152 3.85e-11 63.9
Msa1288790 MtrunA17_Chr7g0275911 32.479 117 59 1 10 106 2 118 3.89e-11 63.2
Msa1288790 MtrunA17_Chr4g0022901 35.185 108 50 1 24 111 17 124 4.70e-11 63.2
Msa1288790 MtrunA17_Chr8g0343831 32.632 95 44 1 24 98 12 106 4.72e-11 62.8
Msa1288790 MtrunA17_Chr8g0354661 25.221 226 132 6 1 197 14 231 6.61e-11 64.3
Msa1288790 MtrunA17_Chr3g0088461 31.481 108 69 1 3 105 20 127 7.60e-11 63.2
Msa1288790 MtrunA17_Chr7g0247131 44.444 63 35 0 44 106 22 84 8.17e-11 62.4
Msa1288790 MtrunA17_Chr4g0037141 33.036 112 54 2 24 114 16 127 8.48e-11 62.4
Msa1288790 MtrunA17_Chr1g0152011 34.000 100 45 1 25 103 17 116 9.35e-11 62.8
Msa1288790 MtrunA17_Chr4g0022911 34.259 108 51 1 24 111 17 124 9.52e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1288790 AT1G14350.2 41.242 451 187 17 13 416 16 435 4.24e-93 287
Msa1288790 AT1G14350.1 41.242 451 187 17 13 416 16 435 4.24e-93 287
Msa1288790 AT2G02820.2 41.328 467 201 16 13 413 21 480 6.79e-90 280
Msa1288790 AT1G14350.3 40.399 401 180 16 44 416 23 392 2.07e-79 251
Msa1288790 AT1G14350.4 40.399 401 180 16 44 416 23 392 2.07e-79 251
Msa1288790 AT2G02820.1 39.080 435 192 16 13 381 21 448 7.22e-76 243
Msa1288790 AT2G02820.3 40.895 313 129 9 13 270 21 332 1.91e-63 207
Msa1288790 AT3G27785.1 34.109 129 52 3 25 120 192 320 1.35e-15 78.6
Msa1288790 AT5G02320.1 39.796 98 39 2 25 102 130 227 3.77e-15 77.8
Msa1288790 AT5G02320.2 39.796 98 39 2 25 102 130 227 3.77e-15 77.8
Msa1288790 AT5G02320.3 39.796 98 39 2 25 102 70 167 5.59e-15 77.0
Msa1288790 AT1G25340.2 35.156 128 64 3 5 116 6 130 2.73e-14 73.2
Msa1288790 AT1G25340.3 35.156 128 64 3 5 116 6 130 3.55e-14 73.2
Msa1288790 AT3G09370.1 38.776 98 40 2 25 102 133 230 4.42e-14 74.3
Msa1288790 AT3G09370.2 38.776 98 40 2 25 102 138 235 4.63e-14 74.3
Msa1288790 AT1G09540.1 34.211 114 54 2 25 117 17 130 5.94e-14 73.2
Msa1288790 AT3G27920.1 38.532 109 47 1 25 113 19 127 6.69e-14 71.2
Msa1288790 AT3G09370.3 38.776 98 40 2 25 102 146 243 7.04e-14 73.9
Msa1288790 AT1G25340.1 33.835 133 64 3 5 116 6 135 1.24e-13 71.2
Msa1288790 AT5G11510.3 33.673 98 46 1 25 103 84 181 1.53e-13 73.2
Msa1288790 AT5G11510.1 33.673 98 46 1 25 103 84 181 1.53e-13 73.2
Msa1288790 AT5G11510.4 33.673 98 46 1 25 103 84 181 1.53e-13 73.2
Msa1288790 AT5G11510.2 33.673 98 46 1 25 103 84 181 1.57e-13 73.2
Msa1288790 AT5G40360.1 34.959 123 50 3 25 121 161 279 1.73e-13 71.6
Msa1288790 AT5G11510.5 33.673 98 46 1 25 103 84 181 1.74e-13 72.8
Msa1288790 AT4G18770.1 32.847 137 68 3 25 137 220 356 1.93e-13 72.0
Msa1288790 AT5G14750.1 38.462 117 50 3 25 119 21 137 1.05e-12 67.4
Msa1288790 AT5G40330.1 38.462 104 43 2 25 107 17 120 2.43e-12 66.6
Msa1288790 AT2G25230.1 33.333 99 47 1 23 102 27 125 2.68e-12 66.6
Msa1288790 AT4G37780.1 35.000 100 44 1 25 103 17 116 3.16e-12 67.4
Msa1288790 AT1G22640.1 30.935 139 70 3 24 141 16 149 3.50e-12 66.6
Msa1288790 AT4G32730.5 38.028 71 44 0 33 103 117 187 4.56e-12 68.6
Msa1288790 AT4G32730.4 38.028 71 44 0 33 103 117 187 4.56e-12 68.6
Msa1288790 AT4G32730.3 38.028 71 44 0 33 103 117 187 4.56e-12 68.6
Msa1288790 AT4G32730.2 38.028 71 44 0 33 103 117 187 4.56e-12 68.6
Msa1288790 AT4G32730.1 38.028 71 44 0 33 103 117 187 4.69e-12 68.6
Msa1288790 AT4G00540.2 34.314 102 45 1 24 103 105 206 4.71e-12 67.8
Msa1288790 AT5G58850.1 30.769 130 63 3 25 135 108 229 5.35e-12 67.8
Msa1288790 AT4G00540.1 34.314 102 45 1 24 103 103 204 7.27e-12 67.4
Msa1288790 AT3G27810.1 33.945 109 51 2 25 112 25 133 7.86e-12 65.1
Msa1288790 AT3G30210.1 34.314 102 47 1 25 106 32 133 9.64e-12 65.9
Msa1288790 AT5G11050.1 33.913 115 48 3 25 112 108 221 1.01e-11 66.6
Msa1288790 AT5G14750.3 43.182 88 48 2 34 119 16 103 1.15e-11 63.5
Msa1288790 AT5G40350.1 28.025 157 84 3 25 152 22 178 1.26e-11 64.3
Msa1288790 AT3G13540.1 29.605 152 81 4 25 152 28 177 1.29e-11 65.1
Msa1288790 AT4G38620.1 31.298 131 69 2 24 133 16 146 1.43e-11 65.1
Msa1288790 AT1G08810.1 34.711 121 57 3 25 123 17 137 1.57e-11 65.1
Msa1288790 AT3G61250.1 36.364 99 43 1 25 103 17 115 1.78e-11 65.1
Msa1288790 AT4G09460.1 32.456 114 56 2 24 116 16 129 2.25e-11 63.9
Msa1288790 AT4G34990.1 30.921 152 81 4 24 152 16 166 2.37e-11 64.3
Msa1288790 AT2G32460.2 33.333 99 46 1 25 103 11 109 3.40e-11 65.5
Msa1288790 AT2G32460.1 33.333 99 46 1 25 103 23 121 3.70e-11 65.1
Msa1288790 AT3G23250.1 36.364 99 43 1 25 103 17 115 3.91e-11 63.9
Msa1288790 AT5G35550.1 37.000 100 42 2 24 102 18 117 3.93e-11 63.5
Msa1288790 AT3G13890.2 31.304 115 59 1 9 103 1 115 4.01e-11 64.7
Msa1288790 AT5G16770.4 34.234 111 52 2 25 114 17 127 4.44e-11 64.3
Msa1288790 AT5G16770.3 34.234 111 52 2 25 114 17 127 4.44e-11 64.3
Msa1288790 AT1G06180.1 33.036 112 55 1 25 116 17 128 4.52e-11 63.2
Msa1288790 AT3G13890.1 38.095 84 51 1 20 103 42 124 4.66e-11 64.3
Msa1288790 AT5G16770.1 34.234 111 52 2 25 114 17 127 4.84e-11 64.3
Msa1288790 AT5G16770.2 34.234 111 52 2 25 114 17 127 4.84e-11 64.3
Msa1288790 AT4G33450.1 32.710 107 53 1 25 112 22 128 6.64e-11 62.8
Msa1288790 AT2G16720.1 32.456 114 56 2 24 116 16 129 7.71e-11 62.8
Msa1288790 AT1G68320.1 32.432 111 54 2 25 114 24 134 8.10e-11 63.2
Msa1288790 AT3G24310.1 33.028 109 53 1 25 113 23 131 8.78e-11 62.8
Msa1288790 AT4G01680.3 33.333 99 62 2 44 141 56 151 9.87e-11 62.0

Find 122 sgRNAs with CRISPR-Local

Find 700 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGTTCATATTTGTTATTT+TGG 0.117659 8_3:+41961107 None:intergenic
TGGAAAATTGTTCACATTAT+TGG 0.119491 8_3:+41961308 None:intergenic
AACTTGTAATGGTGATAATT+TGG 0.189699 8_3:-41960156 Msa1288790:CDS
TTCAAGGTTGTTAATTTATT+AGG 0.213223 8_3:-41964348 Msa1288790:five_prime_UTR
CAAGAGCTGTCTTGATTAAT+TGG 0.245313 8_3:-41956243 Msa1288790:three_prime_UTR
ACGCAAGGTCGCGGTTTGTA+TGG 0.261062 8_3:+41956610 None:intergenic
GAATGTATCATAGCATTCTA+TGG 0.291534 8_3:+41956119 None:intergenic
CTTACACTGTCTGTAAATTC+TGG 0.293960 8_3:+41959324 None:intergenic
CTTCCTGGGGAGTCCTTGTC+TGG 0.304115 8_3:+41960218 None:intergenic
TGAATTCTTTGTTCCATCCT+TGG 0.305023 8_3:-41956384 Msa1288790:three_prime_UTR
TTGTTCCATCCTTGGCATTT+CGG 0.307153 8_3:-41956376 Msa1288790:three_prime_UTR
TGAAATAGCAAAGGTGGTTT+CGG 0.312899 8_3:-41961771 Msa1288790:CDS
AAACTTTGATGATGTTATAT+TGG 0.327776 8_3:+41956198 None:intergenic
TAACAAATATGAACTCAAAA+AGG 0.335558 8_3:-41961101 Msa1288790:CDS
ATTGGATTGTTGAGCTAATT+CGG 0.339006 8_3:+41961326 None:intergenic
AGAGGGGAACAGTTCATTCT+TGG 0.341828 8_3:+41959393 None:intergenic
GAAATAGCAAAGGTGGTTTC+GGG 0.342062 8_3:-41961770 Msa1288790:CDS
TTTGGAAAGCTCATTGAATC+AGG 0.346675 8_3:-41960138 Msa1288790:CDS
TCAGCCAAGGATCTGAAAAT+AGG 0.355214 8_3:+41959360 None:intergenic
CCTTCTTCGTATCCATCGTT+TGG 0.363766 8_3:+41964062 None:intergenic
TTTCTCCAATGATATCTGTT+TGG 0.367056 8_3:+41960405 None:intergenic
TTGAATGCGCATTTGAGTTA+AGG 0.371361 8_3:-41964686 Msa1288790:intron
GTGAAAGAGGTTCTTTCTAC+TGG 0.383028 8_3:-41960056 Msa1288790:CDS
CAGAGAACATGGAAAGAGTA+TGG 0.385331 8_3:-41961039 Msa1288790:CDS
TTGCTCCATCCTTGACAATT+CGG 0.387480 8_3:-41956514 Msa1288790:three_prime_UTR
ATTATCTGTTCATCACAGTT+TGG 0.388372 8_3:+41959423 None:intergenic
TTGAATGCTAATTTCAAGAA+AGG 0.399589 8_3:-41962731 Msa1288790:CDS
AGCTCATTGAATCAGGATAC+TGG 0.400883 8_3:-41960131 Msa1288790:CDS
ATCTGTATTATAATCTTGAT+AGG 0.404558 8_3:+41961566 None:intergenic
ATTGCAATCATTCTCAAAAC+AGG 0.406236 8_3:+41956174 None:intergenic
TCTGAAAAGGTTGCTATTCA+AGG 0.413939 8_3:-41964364 Msa1288790:five_prime_UTR
TGAATCAATGCACTTATCTT+CGG 0.415139 8_3:+41961073 None:intergenic
TTTGATGATGTTATATTGGC+AGG 0.416446 8_3:+41956202 None:intergenic
TTACACTGTCTGTAAATTCT+GGG 0.428890 8_3:+41959325 None:intergenic
TTTGTATGTCAGATGAATCA+TGG 0.429303 8_3:+41956430 None:intergenic
GTACTGTATTCAGAACTTCC+TGG 0.435913 8_3:+41960203 None:intergenic
GTTAATTTATTAGGAAAAGA+AGG 0.437612 8_3:-41964339 Msa1288790:intron
CATGTGCCTTTCAAAACTTA+AGG 0.442557 8_3:+41956146 None:intergenic
CTGAACCAAACAGATATCAT+TGG 0.446280 8_3:-41960410 Msa1288790:CDS
TGAACTGCTGATCTTGTCAT+TGG 0.450783 8_3:+41961269 None:intergenic
TTGGAAACATGATGCCTGTC+TGG 0.452074 8_3:+41961288 None:intergenic
TGACACCTCCTTTAAAATCA+AGG 0.460427 8_3:+41956264 None:intergenic
AATGACAAGATCAGCAGTTC+AGG 0.467467 8_3:-41961267 Msa1288790:intron
TGAATCACGGATTATATTGA+AGG 0.476454 8_3:+41956581 None:intergenic
TTGACATTGGTACTGATAGA+TGG 0.479525 8_3:+41956634 None:intergenic
CAACATAAGTCAACTTGTAA+TGG 0.481197 8_3:-41960167 Msa1288790:CDS
TACTGTATTCAGAACTTCCT+GGG 0.485330 8_3:+41960204 None:intergenic
AATTCGGCAAGTGGTGCTCT+TGG 0.486861 8_3:+41961342 None:intergenic
GGAACTTTGAAGTACTTCCT+TGG 0.489280 8_3:+41956285 None:intergenic
GGTTCTTTCTACTGGAAAAG+TGG 0.489600 8_3:-41960048 Msa1288790:CDS
GAAATGCAAGCTACACAACT+CGG 0.493299 8_3:-41960104 Msa1288790:CDS
AGAGAACAGATCGGAAATCA+TGG 0.496272 8_3:-41963227 Msa1288790:CDS
TTCGTATCCATCGTTTGGCT+CGG 0.496721 8_3:+41964067 None:intergenic
CAAAGGATTCAGAAAGCAAA+AGG 0.496820 8_3:+41956534 None:intergenic
TCCCCTCTTCTTGCGGAGTG+TGG 0.498113 8_3:+41961626 None:intergenic
GATAGTGAGAGATCAGAGGA+AGG 0.507296 8_3:-41964391 Msa1288790:five_prime_UTR
AATGCTAATTTCAAGAAAGG+TGG 0.507910 8_3:-41962728 Msa1288790:CDS
TATACCATACCTCACATAAG+AGG 0.511240 8_3:+41962684 None:intergenic
GGAACAAAGAATTCAGAAAC+GGG 0.511410 8_3:+41956392 None:intergenic
AGAGGAAGGAGAGTCTGAAA+AGG 0.512587 8_3:-41964377 Msa1288790:five_prime_UTR
TTCAGGAAAAGAGCTTCCTA+AGG 0.512588 8_3:-41956678 Msa1288790:intron
CATAAGAGGATATCTTCGTC+TGG 0.513651 8_3:+41962698 None:intergenic
AAATGCAAGCTACACAACTC+GGG 0.520511 8_3:-41960103 Msa1288790:CDS
TGGAACAAAGAATTCAGAAA+CGG 0.527334 8_3:+41956391 None:intergenic
CTCCACACTCCGCAAGAAGA+GGG 0.527407 8_3:-41961628 Msa1288790:CDS
AGGGCTCTTACGCAAGGTCG+CGG 0.532523 8_3:+41956601 None:intergenic
TGAAGAATCGTCTACGAAGA+AGG 0.534329 8_3:-41964023 Msa1288790:CDS
AGTATGTGAAGGTGTGAAAG+AGG 0.542143 8_3:-41960069 Msa1288790:CDS
AATGTATCATAGCATTCTAT+GGG 0.543602 8_3:+41956120 None:intergenic
GAGCTTCCTAAGGAAAACAC+TGG 0.550639 8_3:-41956668 Msa1288790:CDS
CCTAAGGAAAACACTGGGAG+TGG 0.551879 8_3:-41956662 Msa1288790:CDS
CTCTGAGAGCCGAATTGTCA+AGG 0.552938 8_3:+41956505 None:intergenic
CGGTTTGTATGGGTTGACAT+TGG 0.553114 8_3:+41956621 None:intergenic
GAACATGGAAAGAGTATGGA+AGG 0.555219 8_3:-41961035 Msa1288790:intron
CTCTGAAAGCCGAAATGCCA+AGG 0.556419 8_3:+41956367 None:intergenic
GAAAGCCGAAATGCCAAGGA+TGG 0.557155 8_3:+41956371 None:intergenic
CCAAACGATGGATACGAAGA+AGG 0.560489 8_3:-41964062 Msa1288790:exon
GGAAGTTCTGAATACAGTAC+AGG 0.563238 8_3:-41960200 Msa1288790:CDS
CTGTCTGTAAATTCTGGGGT+TGG 0.563447 8_3:+41959330 None:intergenic
AATAATTGATTCAGAGAACA+TGG 0.563794 8_3:-41961050 Msa1288790:CDS
AAATAGGAGTCACTTGAAGA+GGG 0.570209 8_3:+41959376 None:intergenic
TCTCCACACTCCGCAAGAAG+AGG 0.571147 8_3:-41961629 Msa1288790:CDS
GGAACAGTTCATTCTTGGCA+AGG 0.573554 8_3:+41959398 None:intergenic
AAAATAGGAGTCACTTGAAG+AGG 0.573906 8_3:+41959375 None:intergenic
CATGTATGTAGAGAGAATCA+AGG 0.575057 8_3:+41964716 None:intergenic
TTTGAATGTCAGATGAATCA+CGG 0.583244 8_3:+41956568 None:intergenic
GAGAGCCGAATTGTCAAGGA+TGG 0.583542 8_3:+41956509 None:intergenic
GAACTTAAACTACCTCAAGC+AGG 0.583580 8_3:+41960313 None:intergenic
TGGTTCAGAAACTCTAGAAG+TGG 0.583666 8_3:+41960425 None:intergenic
ACGAAGAAGGAGAAGCAACA+AGG 0.590316 8_3:-41964049 Msa1288790:CDS
TCGAAGGCCGAGCCAAACGA+TGG 0.595047 8_3:-41964074 Msa1288790:exon
GGTTGGAATTCCTTCAGCCA+AGG 0.598102 8_3:+41959347 None:intergenic
AGGAGCGGCATATTGTGACT+TGG 0.598859 8_3:-41964003 Msa1288790:CDS
CTAATTTCAAGAAAGGTGGA+TGG 0.600077 8_3:-41962724 Msa1288790:CDS
GGTTGGCTTCACTCACTCGA+AGG 0.602217 8_3:-41964090 Msa1288790:five_prime_UTR
TGTTGAGCTAATTCGGCAAG+TGG 0.604507 8_3:+41961333 None:intergenic
TATTGAAGGGCTCTTACGCA+AGG 0.605869 8_3:+41956595 None:intergenic
TCCACACTCCGCAAGAAGAG+GGG 0.606231 8_3:-41961627 Msa1288790:CDS
AAACCAGACAAGGACTCCCC+AGG 0.613720 8_3:-41960221 Msa1288790:CDS
CGAAGAAGGAGAAGCAACAA+GGG 0.615386 8_3:-41964048 Msa1288790:CDS
TACACTGTCTGTAAATTCTG+GGG 0.621792 8_3:+41959326 None:intergenic
TATTGTGACTTGGACTCAAG+AGG 0.624420 8_3:-41963993 Msa1288790:intron
AATTGTCAAGGATGGAGCAA+AGG 0.624658 8_3:+41956517 None:intergenic
AGAGGATAGTGAGAGATCAG+AGG 0.628803 8_3:-41964395 Msa1288790:five_prime_UTR
ATGGACTGAAATAGCAAAGG+TGG 0.630996 8_3:-41961777 Msa1288790:CDS
AGAGAGGCAATTCCTGCTTG+AGG 0.631946 8_3:-41960325 Msa1288790:intron
GATATACTAAGAGAACAGAT+CGG 0.632217 8_3:-41963236 Msa1288790:CDS
TTTAAGAGCAGTAATGAGAG+AGG 0.632751 8_3:-41960341 Msa1288790:CDS
ACATTGATTCAAATAGCAAG+AGG 0.635696 8_3:-41961596 Msa1288790:CDS
CAGATGGACTGAAATAGCAA+AGG 0.637124 8_3:-41961780 Msa1288790:CDS
GCTTGTAAGTCATACAGTCA+AGG 0.638751 8_3:-41960366 Msa1288790:CDS
CGAAGATATCCTCTTATGTG+AGG 0.640010 8_3:-41962693 Msa1288790:intron
AGCTTCCTAAGGAAAACACT+GGG 0.644686 8_3:-41956667 Msa1288790:CDS
GAATCACGGATTATATTGAA+GGG 0.646572 8_3:+41956582 None:intergenic
TCTACTGGAAAAGTGGAACA+AGG 0.646785 8_3:-41960041 Msa1288790:intron
TAGCAAAGGTGGTTTCGGGA+AGG 0.647071 8_3:-41961766 Msa1288790:intron
AATAGGAGTCACTTGAAGAG+GGG 0.664295 8_3:+41959377 None:intergenic
TAGGCAAATAAAACCAGACA+AGG 0.664638 8_3:-41960231 Msa1288790:CDS
AATGAGCTATCTCTAGACCA+AGG 0.688838 8_3:-41956302 Msa1288790:three_prime_UTR
AATGCAAGCTACACAACTCG+GGG 0.696437 8_3:-41960102 Msa1288790:CDS
AATCGTCTACGAAGAAGGAG+CGG 0.700661 8_3:-41964018 Msa1288790:CDS
ACTGTATTCAGAACTTCCTG+GGG 0.716719 8_3:+41960205 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAAAATAAGTTGAAA+AGG + chr8_3:41956129-41956148 None:intergenic 10.0%
!! AATGCATAAATTAAAAAAAT+GGG + chr8_3:41956211-41956230 None:intergenic 10.0%
!! TCAAAAAAAAAAATGTTATT+AGG - chr8_3:41956738-41956757 Msa1288790:intron 10.0%
!! CAAAAAAAAAAATGTTATTA+GGG - chr8_3:41956739-41956758 Msa1288790:intron 10.0%
!! AATAAAAATTTCCTATAATT+AGG + chr8_3:41957719-41957738 None:intergenic 10.0%
!! GATTTAAAAATTATATATTG+AGG + chr8_3:41958350-41958369 None:intergenic 10.0%
!! TTAAAAATATAATTGCATAA+GGG + chr8_3:41958700-41958719 None:intergenic 10.0%
!! TTTAAAAATATAATTGCATA+AGG + chr8_3:41958701-41958720 None:intergenic 10.0%
!!! ATTATATTTTTAAAAATCAG+AGG - chr8_3:41958707-41958726 Msa1288790:intron 10.0%
!! AAAAATTATAACAGTAATAA+TGG - chr8_3:41961390-41961409 Msa1288790:CDS 10.0%
!! ATTATAGATAAAAAATTATG+TGG - chr8_3:41963312-41963331 Msa1288790:intron 10.0%
!! TTATAGATAAAAAATTATGT+GGG - chr8_3:41963313-41963332 Msa1288790:intron 10.0%
!! AGAATATATAAAAGGAAAAT+GGG + chr8_3:41956182-41956201 None:intergenic 15.0%
!! AAGAATATATAAAAGGAAAA+TGG + chr8_3:41956183-41956202 None:intergenic 15.0%
!! CAATGCATAAATTAAAAAAA+TGG + chr8_3:41956212-41956231 None:intergenic 15.0%
!! AAATTGAATTTATGTTGTAA+AGG - chr8_3:41956410-41956429 Msa1288790:three_prime_UTR 15.0%
!! ATAATTAACAAATATACAAC+AGG + chr8_3:41957342-41957361 None:intergenic 15.0%
!! AAATGTTTAAAAAATTGAAC+TGG + chr8_3:41957683-41957702 None:intergenic 15.0%
!!! ATTTTTATTATATATGCAGT+TGG - chr8_3:41957730-41957749 Msa1288790:intron 15.0%
!!! TTTTTATTATATATGCAGTT+GGG - chr8_3:41957731-41957750 Msa1288790:intron 15.0%
!! TAAAAATTATATATTGAGGA+AGG + chr8_3:41958346-41958365 None:intergenic 15.0%
!! ATTAATTAGAGTTATATTAC+TGG + chr8_3:41958668-41958687 None:intergenic 15.0%
!! TAAAAATATAATTGCATAAG+GGG + chr8_3:41958699-41958718 None:intergenic 15.0%
!! AAAGATAATATCAAGAAATT+AGG + chr8_3:41958831-41958850 None:intergenic 15.0%
!! ATTTACAGAACATATTAATT+CGG + chr8_3:41959472-41959491 None:intergenic 15.0%
!!! ATGATTTCTAAATATTTTCT+AGG - chr8_3:41960405-41960424 Msa1288790:CDS 15.0%
!! GAAAATTACATGAAAATATT+AGG - chr8_3:41960681-41960700 Msa1288790:intron 15.0%
!! ACATAATAAAAACAATGTTT+CGG - chr8_3:41960847-41960866 Msa1288790:intron 15.0%
!! TTCAAAAATTATGAAGAAAA+CGG - chr8_3:41960904-41960923 Msa1288790:intron 15.0%
!!! TATTACTGTTATAATTTTTG+TGG + chr8_3:41961389-41961408 None:intergenic 15.0%
!! ACAATTGTACTAAAAAAATA+GGG + chr8_3:41961667-41961686 None:intergenic 15.0%
!!! TTTTTTACCATTTAGTTTAT+TGG + chr8_3:41962097-41962116 None:intergenic 15.0%
!! ATATAATAGGAAAACTAAAA+GGG - chr8_3:41963089-41963108 Msa1288790:intron 15.0%
!! CGTATAAATTAATGTATATT+TGG - chr8_3:41963493-41963512 Msa1288790:intron 15.0%
!!! TATTTTTAAATCCATGATAT+TGG + chr8_3:41963673-41963692 None:intergenic 15.0%
!! AATATCATGGATTTAAAAAT+AGG - chr8_3:41963672-41963691 Msa1288790:intron 15.0%
!! ATATCATGGATTTAAAAATA+GGG - chr8_3:41963673-41963692 Msa1288790:intron 15.0%
!!! AGAGTTTTTCTTAATTTTAA+AGG - chr8_3:41964169-41964188 Msa1288790:intron 15.0%
!!! GAGTTTTTCTTAATTTTTTA+TGG - chr8_3:41964308-41964327 Msa1288790:intron 15.0%
!!! AAAAGTAATTTTTAGTGAAA+GGG + chr8_3:41964574-41964593 None:intergenic 15.0%
!!! AAAAAGTAATTTTTAGTGAA+AGG + chr8_3:41964575-41964594 None:intergenic 15.0%
!! AAGAAAAAGAAAAAGAAAAA+CGG + chr8_3:41964647-41964666 None:intergenic 15.0%
!! TTCAAGGTTGTTAATTTATT+AGG - chr8_3:41956307-41956326 Msa1288790:three_prime_UTR 20.0%
!! GTTAATTTATTAGGAAAAGA+AGG - chr8_3:41956316-41956335 Msa1288790:three_prime_UTR 20.0%
!!! TTTGTTTCTTTTACGTTTTT+AGG - chr8_3:41956689-41956708 Msa1288790:intron 20.0%
!! TTTAGGAATCAAATGTTATT+AGG - chr8_3:41956706-41956725 Msa1288790:intron 20.0%
!! TTAGGAATCAAATGTTATTA+GGG - chr8_3:41956707-41956726 Msa1288790:intron 20.0%
!!! AAAAATGTTATTAGGGTTTT+CGG - chr8_3:41956746-41956765 Msa1288790:intron 20.0%
!!! TTTAGAAATCTGCATTTTTT+TGG - chr8_3:41956987-41957006 Msa1288790:intron 20.0%
!!! TTAGAAATCTGCATTTTTTT+GGG - chr8_3:41956988-41957007 Msa1288790:intron 20.0%
!!! ATTTAGAAATCTGCATTTTT+TGG - chr8_3:41956986-41957005 Msa1288790:intron 20.0%
!!! TTTAGAAATCTGCATTTTTT+GGG - chr8_3:41956987-41957006 Msa1288790:intron 20.0%
!! TAAATAATACTTAAGCTTCA+CGG + chr8_3:41957304-41957323 None:intergenic 20.0%
!!! TTACATATTGGTTATATATG+TGG - chr8_3:41957383-41957402 Msa1288790:intron 20.0%
!!! TACATATTGGTTATATATGT+GGG - chr8_3:41957384-41957403 Msa1288790:intron 20.0%
!! CAAAAGAAAAAATAAGAAAG+GGG + chr8_3:41957472-41957491 None:intergenic 20.0%
!! GCAAAAGAAAAAATAAGAAA+GGG + chr8_3:41957473-41957492 None:intergenic 20.0%
!!! TTTTAAAAATTTAACCGAAC+TGG - chr8_3:41957520-41957539 Msa1288790:intron 20.0%
!!! TAACAAGCTTGTTATAAAAT+TGG - chr8_3:41958052-41958071 Msa1288790:intron 20.0%
!! AAATTACCCATTAATTATAG+TGG + chr8_3:41958321-41958340 None:intergenic 20.0%
!! ATTAACAGATACATTTCTTT+CGG + chr8_3:41958795-41958814 None:intergenic 20.0%
!! TTTCTTGATATTATCTTTGT+AGG - chr8_3:41958833-41958852 Msa1288790:intron 20.0%
!! AAAAAATATTTGGAAACAGA+TGG - chr8_3:41958859-41958878 Msa1288790:intron 20.0%
!! ATCTGTATTATAATCTTGAT+AGG + chr8_3:41959092-41959111 None:intergenic 20.0%
!! ATGTTCTGTAAATATAACTT+TGG - chr8_3:41959479-41959498 Msa1288790:intron 20.0%
!!! TGAGTTCATATTTGTTATTT+TGG + chr8_3:41959551-41959570 None:intergenic 20.0%
!! TAACAAATATGAACTCAAAA+AGG - chr8_3:41959554-41959573 Msa1288790:intron 20.0%
!! AAATGTTGAAGACTAAAAAA+TGG + chr8_3:41959669-41959688 None:intergenic 20.0%
!! AAGCCCAAAATTATAAATAT+CGG - chr8_3:41959735-41959754 Msa1288790:intron 20.0%
!!! CATTTAACATTTTTTCATCT+TGG - chr8_3:41959851-41959870 Msa1288790:intron 20.0%
!! CTTTGTAAATATAACTTATG+TGG - chr8_3:41960364-41960383 Msa1288790:CDS 20.0%
!! ATCATTAGAAATTATTTCAG+AGG + chr8_3:41960390-41960409 None:intergenic 20.0%
!! ACGATTTATTAATATCAGAA+GGG + chr8_3:41960656-41960675 None:intergenic 20.0%
!! TACGATTTATTAATATCAGA+AGG + chr8_3:41960657-41960676 None:intergenic 20.0%
!! CCAAATCATTTACAAAAATT+AGG + chr8_3:41961014-41961033 None:intergenic 20.0%
!!! CCTAATTTTTGTAAATGATT+TGG - chr8_3:41961011-41961030 Msa1288790:intron 20.0%
!!! TTTTGTAAATGATTTGGTTT+AGG - chr8_3:41961017-41961036 Msa1288790:intron 20.0%
!! GACAATTGTACTAAAAAAAT+AGG + chr8_3:41961668-41961687 None:intergenic 20.0%
!! AAGAATTGAATGGAATATAA+GGG + chr8_3:41961690-41961709 None:intergenic 20.0%
!! TTATATTCCATTCAATTCTT+GGG - chr8_3:41961690-41961709 Msa1288790:intron 20.0%
!!! TCCATTTTTTTTGAACAATT+GGG + chr8_3:41962561-41962580 None:intergenic 20.0%
!!! ATCCATTTTTTTTGAACAAT+TGG + chr8_3:41962562-41962581 None:intergenic 20.0%
!! GATATAATAGGAAAACTAAA+AGG - chr8_3:41963088-41963107 Msa1288790:intron 20.0%
!!! AAATCAGACATTTTAAAACT+GGG + chr8_3:41963387-41963406 None:intergenic 20.0%
!!! AAAATCAGACATTTTAAAAC+TGG + chr8_3:41963388-41963407 None:intergenic 20.0%
!! TTAATGTATATTTGGATGAA+TGG - chr8_3:41963501-41963520 Msa1288790:intron 20.0%
!!! TTTGACATCTTTAAAATTGA+GGG - chr8_3:41963646-41963665 Msa1288790:intron 20.0%
!! TATCATGGATTTAAAAATAG+GGG - chr8_3:41963674-41963693 Msa1288790:intron 20.0%
!!! TTTGTCTCAGTTTTTTATTT+TGG + chr8_3:41963702-41963721 None:intergenic 20.0%
!!! TGAAAGAAAGTGTTAAAAAA+TGG + chr8_3:41963961-41963980 None:intergenic 20.0%
!!! ATTTTTTAACACTTTCTTTC+AGG - chr8_3:41963960-41963979 Msa1288790:intron 20.0%
!!! GTTTTTCTTAATTTTAAAGG+AGG - chr8_3:41964172-41964191 Msa1288790:intron 20.0%
!!! TCTTAATTTTTTATGGTGTA+CGG - chr8_3:41964315-41964334 Msa1288790:intron 20.0%
!!! AAACTTTGATGATGTTATAT+TGG + chr8_3:41964460-41964479 None:intergenic 20.0%
!!! AAAGTAATTTTTAGTGAAAG+GGG + chr8_3:41964573-41964592 None:intergenic 20.0%
!!! GATTAAGTTAAAGCTTTGTT+TGG - chr8_3:41956053-41956072 Msa1288790:three_prime_UTR 25.0%
! GGCAATGAAGAATATATAAA+AGG + chr8_3:41956190-41956209 None:intergenic 25.0%
!!! ATAATACCTTTTGTTTAGTC+AGG - chr8_3:41956378-41956397 Msa1288790:three_prime_UTR 25.0%
!!! TAATACCTTTTGTTTAGTCA+GGG - chr8_3:41956379-41956398 Msa1288790:three_prime_UTR 25.0%
! AAATAATACTTAAGCTTCAC+GGG + chr8_3:41957303-41957322 None:intergenic 25.0%
! AATTATTCCATTGCATTTGA+TGG - chr8_3:41957356-41957375 Msa1288790:intron 25.0%
! GGCAAAAGAAAAAATAAGAA+AGG + chr8_3:41957474-41957493 None:intergenic 25.0%
! TTATTTGTTCAGTTTGATTG+TGG - chr8_3:41957589-41957608 Msa1288790:intron 25.0%
! TTAACTAATACAATCTCAGA+TGG - chr8_3:41957892-41957911 Msa1288790:intron 25.0%
! TTGAATGCTAATTTCAAGAA+AGG - chr8_3:41957924-41957943 Msa1288790:intron 25.0%
! AAGTTTGGTATTGTAATCTT+AGG - chr8_3:41958246-41958265 Msa1288790:intron 25.0%
! ATTAATTATAGTGGCACTAA+CGG + chr8_3:41958312-41958331 None:intergenic 25.0%
!! TTAGTGCCACTATAATTAAT+GGG - chr8_3:41958312-41958331 Msa1288790:intron 25.0%
!! AATTTTTAAATCTGATGCGT+AGG - chr8_3:41958358-41958377 Msa1288790:intron 25.0%
!!! CATTGCTATCACTTTTTTTT+GGG - chr8_3:41958515-41958534 Msa1288790:intron 25.0%
! GTAAACATATACAAGTATCT+GGG + chr8_3:41958748-41958767 None:intergenic 25.0%
! AGTAAACATATACAAGTATC+TGG + chr8_3:41958749-41958768 None:intergenic 25.0%
! TTGTAGGCTCAAAAAATATT+TGG - chr8_3:41958849-41958868 Msa1288790:intron 25.0%
! ATATTATCCTACTGCATAAT+AGG - chr8_3:41959206-41959225 Msa1288790:intron 25.0%
! TGGAAAATTGTTCACATTAT+TGG + chr8_3:41959350-41959369 None:intergenic 25.0%
! ATATTGCATTATGATAACCA+AGG - chr8_3:41959433-41959452 Msa1288790:CDS 25.0%
!! AATAATTGATTCAGAGAACA+TGG - chr8_3:41959605-41959624 Msa1288790:intron 25.0%
!! GGACCGATATTTATAATTTT+GGG + chr8_3:41959741-41959760 None:intergenic 25.0%
!! AGGACCGATATTTATAATTT+TGG + chr8_3:41959742-41959761 None:intergenic 25.0%
! AAATATAATCTGTAACAAGC+AGG + chr8_3:41959762-41959781 None:intergenic 25.0%
!! ACAATCTAATTGGAAAGTAT+AGG - chr8_3:41959902-41959921 Msa1288790:intron 25.0%
! TGCACAATAATAAGAGTTAA+TGG + chr8_3:41960058-41960077 None:intergenic 25.0%
! TGTGCACATATAAATATGAT+AGG - chr8_3:41960072-41960091 Msa1288790:CDS 25.0%
!! TAAATATGATAGGTGTCATA+AGG - chr8_3:41960082-41960101 Msa1288790:CDS 25.0%
! AGTCACGTATAAAATATGAT+AGG - chr8_3:41960156-41960175 Msa1288790:CDS 25.0%
! AACTTGTAATGGTGATAATT+TGG - chr8_3:41960499-41960518 Msa1288790:intron 25.0%
!! GTTAAAAAAGAAGTATGTGA+AGG - chr8_3:41960575-41960594 Msa1288790:intron 25.0%
! CGATTTATTAATATCAGAAG+GGG + chr8_3:41960655-41960674 None:intergenic 25.0%
! AAATGATTTCAGAAAGTAAG+CGG + chr8_3:41960708-41960727 None:intergenic 25.0%
! TGTTAGGAAATAGACTAATT+AGG - chr8_3:41961460-41961479 Msa1288790:intron 25.0%
! TAGAGAAGTTATTCGTTAAT+TGG - chr8_3:41961514-41961533 Msa1288790:intron 25.0%
! AGAGAAGTTATTCGTTAATT+GGG - chr8_3:41961515-41961534 Msa1288790:intron 25.0%
! TAGTGACTCTAATGTAATAA+GGG - chr8_3:41961617-41961636 Msa1288790:CDS 25.0%
! CAAGAATTGAATGGAATATA+AGG + chr8_3:41961691-41961710 None:intergenic 25.0%
! CTTATATTCCATTCAATTCT+TGG - chr8_3:41961689-41961708 Msa1288790:intron 25.0%
! TAAATATTATTCTGATCTGC+CGG - chr8_3:41961717-41961736 Msa1288790:intron 25.0%
! GATCAAACCAATAAACTAAA+TGG - chr8_3:41962087-41962106 Msa1288790:intron 25.0%
! TGGTAAAAAATTAAGAGAAG+TGG - chr8_3:41962107-41962126 Msa1288790:intron 25.0%
!! TGATTAACGTCTAATTGTTT+TGG + chr8_3:41962254-41962273 None:intergenic 25.0%
! AATTGGGTTAATATCCATTT+GGG + chr8_3:41962545-41962564 None:intergenic 25.0%
! ACCCAATTGTTCAAAAAAAA+TGG - chr8_3:41962557-41962576 Msa1288790:intron 25.0%
!! TTCTGGAAATATAGAAGATA+TGG - chr8_3:41963184-41963203 Msa1288790:intron 25.0%
! ATCGTGAATCAGTAAAAATT+GGG + chr8_3:41963356-41963375 None:intergenic 25.0%
! AATCGTGAATCAGTAAAAAT+TGG + chr8_3:41963357-41963376 None:intergenic 25.0%
!!! TTTTTACTGATTCACGATTT+TGG - chr8_3:41963358-41963377 Msa1288790:intron 25.0%
!!! AATCAGACATTTTAAAACTG+GGG + chr8_3:41963386-41963405 None:intergenic 25.0%
!!! TTGTCCACTTATTTATTTTG+AGG - chr8_3:41963408-41963427 Msa1288790:intron 25.0%
! TTTGGATGAATGGAAAATAT+TGG - chr8_3:41963511-41963530 Msa1288790:intron 25.0%
!!! GTTTGACATCTTTAAAATTG+AGG - chr8_3:41963645-41963664 Msa1288790:intron 25.0%
! ATCATGGATTTAAAAATAGG+GGG - chr8_3:41963675-41963694 Msa1288790:intron 25.0%
! AAAAAACTGAGACAAAATAG+AGG - chr8_3:41963706-41963725 Msa1288790:intron 25.0%
! AAAAACTGAGACAAAATAGA+GGG - chr8_3:41963707-41963726 Msa1288790:intron 25.0%
! AAAATGGTTTCTACGTATTA+AGG + chr8_3:41963811-41963830 None:intergenic 25.0%
! ACAAAACACACTAAATACAA+AGG + chr8_3:41963873-41963892 None:intergenic 25.0%
!!! ACTGTATTGTTTTGTTTGTT+AGG - chr8_3:41963901-41963920 Msa1288790:intron 25.0%
!! TCAAAGTTCCTTGATTTTAA+AGG - chr8_3:41964383-41964402 Msa1288790:five_prime_UTR 25.0%
! AATGTATCATAGCATTCTAT+GGG + chr8_3:41964538-41964557 None:intergenic 25.0%
!! TTGATACTTGCAAAAAGTAT+TGG - chr8_3:41964594-41964613 Msa1288790:intron 25.0%
!!! ACATAATCTGGGTTTTTTCT+GGG - chr8_3:41956083-41956102 Msa1288790:three_prime_UTR 30.0%
TTTCTGCTTTGATTATACAG+AGG - chr8_3:41956242-41956261 Msa1288790:three_prime_UTR 30.0%
ATAAACCCTGACTAAACAAA+AGG + chr8_3:41956387-41956406 None:intergenic 30.0%
TTTGTTTAGTCAGGGTTTAT+TGG - chr8_3:41956387-41956406 Msa1288790:three_prime_UTR 30.0%
! TGATAGTGAAAGAGTAATGT+AGG - chr8_3:41956544-41956563 Msa1288790:three_prime_UTR 30.0%
TAATCTCTGTTTGAGAGATT+TGG - chr8_3:41957013-41957032 Msa1288790:intron 30.0%
TTCCAAATATCAAGCTTGAA+CGG + chr8_3:41957084-41957103 None:intergenic 30.0%
GCTGTTTGATCTTAATTGAA+TGG - chr8_3:41957139-41957158 Msa1288790:intron 30.0%
AATAATACTTAAGCTTCACG+GGG + chr8_3:41957302-41957321 None:intergenic 30.0%
!! TTTGATGGTGTCTTACATAT+TGG - chr8_3:41957371-41957390 Msa1288790:intron 30.0%
GATATACTAAGAGAACAGAT+CGG - chr8_3:41957419-41957438 Msa1288790:intron 30.0%
AGAGCAAAAAAACAACAGTA+TGG + chr8_3:41957495-41957514 None:intergenic 30.0%
TCTGATACTTGCCTAATTAT+AGG - chr8_3:41957705-41957724 Msa1288790:intron 30.0%
AACTATTGCATCCAAATTCA+AGG - chr8_3:41957755-41957774 Msa1288790:intron 30.0%
!!! TGTAGTTTTGTCCTTGAATT+TGG + chr8_3:41957769-41957788 None:intergenic 30.0%
AATGCTAATTTCAAGAAAGG+TGG - chr8_3:41957927-41957946 Msa1288790:intron 30.0%
TCAGCTTAGTACTAAAAGTT+TGG - chr8_3:41958231-41958250 Msa1288790:intron 30.0%
TTAATTATAGTGGCACTAAC+GGG + chr8_3:41958311-41958330 None:intergenic 30.0%
! GTTAGTGCCACTATAATTAA+TGG - chr8_3:41958311-41958330 Msa1288790:intron 30.0%
TCAATTTAGTGGTAAACGTT+TGG - chr8_3:41958437-41958456 Msa1288790:intron 30.0%
CCAAAAAAAAGTGATAGCAA+TGG + chr8_3:41958517-41958536 None:intergenic 30.0%
!!! CCATTGCTATCACTTTTTTT+TGG - chr8_3:41958514-41958533 Msa1288790:intron 30.0%
TCAAGAAATTAGGTCACAAA+GGG + chr8_3:41958821-41958840 None:intergenic 30.0%
ATCAAGAAATTAGGTCACAA+AGG + chr8_3:41958822-41958841 None:intergenic 30.0%
TAATGCTTTCTATGACAGAA+CGG - chr8_3:41958982-41959001 Msa1288790:intron 30.0%
!! ACATTGATTCAAATAGCAAG+AGG - chr8_3:41959059-41959078 Msa1288790:intron 30.0%
!!! TTGATCTTTTTTGCATCATC+GGG + chr8_3:41959244-41959263 None:intergenic 30.0%
!!! GTTGATCTTTTTTGCATCAT+CGG + chr8_3:41959245-41959264 None:intergenic 30.0%
GATGCAAAAAAGATCAACTT+TGG - chr8_3:41959247-41959266 Msa1288790:intron 30.0%
ATTGGATTGTTGAGCTAATT+CGG + chr8_3:41959332-41959351 None:intergenic 30.0%
!!! TCATATTTGTTATTTTGGCC+TGG + chr8_3:41959546-41959565 None:intergenic 30.0%
TGAATCAATGCACTTATCTT+CGG + chr8_3:41959585-41959604 None:intergenic 30.0%
TTTGCTCATCAAACAATTGA+GGG + chr8_3:41959717-41959736 None:intergenic 30.0%
! TCATATTTTATACGTGACTC+TGG + chr8_3:41960155-41960174 None:intergenic 30.0%
TTTCTCCAATGATATCTGTT+TGG + chr8_3:41960253-41960272 None:intergenic 30.0%
CAACATAAGTCAACTTGTAA+TGG - chr8_3:41960488-41960507 Msa1288790:intron 30.0%
AATGATTTCAGAAAGTAAGC+GGG + chr8_3:41960707-41960726 None:intergenic 30.0%
TAGAAAACAGAGAAAGTAAG+TGG - chr8_3:41960986-41961005 Msa1288790:intron 30.0%
AGAAAACAGAGAAAGTAAGT+GGG - chr8_3:41960987-41961006 Msa1288790:intron 30.0%
ATTATCTGTTCATCACAGTT+TGG + chr8_3:41961235-41961254 None:intergenic 30.0%
TTACACTGTCTGTAAATTCT+GGG + chr8_3:41961333-41961352 None:intergenic 30.0%
! AGACTAATTAGGAGTATGTT+AGG - chr8_3:41961471-41961490 Msa1288790:intron 30.0%
! AATTAGGAGTATGTTAGGTT+TGG - chr8_3:41961476-41961495 Msa1288790:intron 30.0%
TAGGTTTATCTTGTGCATAT+AGG - chr8_3:41961542-41961561 Msa1288790:CDS 30.0%
AGGTTTATCTTGTGCATATA+GGG - chr8_3:41961543-41961562 Msa1288790:CDS 30.0%
GTAGTGACTCTAATGTAATA+AGG - chr8_3:41961616-41961635 Msa1288790:CDS 30.0%
AGTGACTCTAATGTAATAAG+GGG - chr8_3:41961618-41961637 Msa1288790:CDS 30.0%
ACTAAAAAAATAGGGAAGTG+AGG + chr8_3:41961659-41961678 None:intergenic 30.0%
GGCAGATCAGAATAATATTT+AGG + chr8_3:41961718-41961737 None:intergenic 30.0%
! AAATCTTTTTATCAGGTCTG+TGG + chr8_3:41961957-41961976 None:intergenic 30.0%
ACAGACCTGATAAAAAGATT+TGG - chr8_3:41961956-41961975 Msa1288790:intron 30.0%
CAGACCTGATAAAAAGATTT+GGG - chr8_3:41961957-41961976 Msa1288790:intron 30.0%
! GATTCCCAAATCTTTTTATC+AGG + chr8_3:41961964-41961983 None:intergenic 30.0%
! AATCTGTTGTTTAATGCAAG+TGG - chr8_3:41962051-41962070 Msa1288790:intron 30.0%
! ATCTGTTGTTTAATGCAAGT+GGG - chr8_3:41962052-41962071 Msa1288790:intron 30.0%
TCAAATCAAAGAATCGTACA+GGG - chr8_3:41962202-41962221 Msa1288790:intron 30.0%
!!! TTAACGTCTAATTGTTTTGG+TGG + chr8_3:41962251-41962270 None:intergenic 30.0%
AATTAGACGTTAATCAGCTT+GGG - chr8_3:41962258-41962277 Msa1288790:intron 30.0%
! TTTTCGTTGAAGAAATCATC+AGG - chr8_3:41962418-41962437 Msa1288790:intron 30.0%
TTTCGTTGAAGAAATCATCA+GGG - chr8_3:41962419-41962438 Msa1288790:intron 30.0%
CACAAGTATATACAATCTTG+TGG - chr8_3:41962449-41962468 Msa1288790:intron 30.0%
AGTATATACAATCTTGTGGA+AGG - chr8_3:41962453-41962472 Msa1288790:intron 30.0%
GATGAATAGAGAGTTGAAAA+GGG - chr8_3:41962477-41962496 Msa1288790:intron 30.0%
CAATTGGGTTAATATCCATT+TGG + chr8_3:41962546-41962565 None:intergenic 30.0%
AGATTGCAAACTATGAAACA+CGG + chr8_3:41962831-41962850 None:intergenic 30.0%
! AGTTTTCCTATTATATCCCA+CGG + chr8_3:41963085-41963104 None:intergenic 30.0%
TTGAACTGAGAATATCTAAG+TGG - chr8_3:41963211-41963230 Msa1288790:intron 30.0%
ATAACATGATTATGCTGCAT+TGG + chr8_3:41963252-41963271 None:intergenic 30.0%
TCGTGAATCAGTAAAAATTG+GGG + chr8_3:41963355-41963374 None:intergenic 30.0%
TCAGCCTCAAAATAAATAAG+TGG + chr8_3:41963415-41963434 None:intergenic 30.0%
! TTTTCTTCACCTATGCATTT+GGG + chr8_3:41963624-41963643 None:intergenic 30.0%
! ATTTTCTTCACCTATGCATT+TGG + chr8_3:41963625-41963644 None:intergenic 30.0%
! TATCATGATACATGCAGTTT+TGG + chr8_3:41963734-41963753 None:intergenic 30.0%
TCATGATAGTCGTCAAATAA+TGG - chr8_3:41963746-41963765 Msa1288790:intron 30.0%
! GAATCACGGATTATATTGAA+GGG + chr8_3:41964076-41964095 None:intergenic 30.0%
! TGAATCACGGATTATATTGA+AGG + chr8_3:41964077-41964096 None:intergenic 30.0%
TTTGAATGTCAGATGAATCA+CGG + chr8_3:41964090-41964109 None:intergenic 30.0%
!! TCTTAATTTTAAAGGAGGTG+TGG - chr8_3:41964177-41964196 Msa1288790:intron 30.0%
TTTGTATGTCAGATGAATCA+TGG + chr8_3:41964228-41964247 None:intergenic 30.0%
TGGAACAAAGAATTCAGAAA+CGG + chr8_3:41964267-41964286 None:intergenic 30.0%
!! AAGTTCCTTGATTTTAAAGG+AGG - chr8_3:41964386-41964405 Msa1288790:five_prime_UTR 30.0%
!! TTTGATGATGTTATATTGGC+AGG + chr8_3:41964456-41964475 None:intergenic 30.0%
ATTGCAATCATTCTCAAAAC+AGG + chr8_3:41964484-41964503 None:intergenic 30.0%
GAATGTATCATAGCATTCTA+TGG + chr8_3:41964539-41964558 None:intergenic 30.0%
! TTGAATGCGCATTTGAGTTA+AGG - chr8_3:41955969-41955988 Msa1288790:three_prime_UTR 35.0%
AAAAAACCCAGATTATGTGG+AGG + chr8_3:41956081-41956100 None:intergenic 35.0%
CAGAAAAAACCCAGATTATG+TGG + chr8_3:41956084-41956103 None:intergenic 35.0%
!!! CACATAATCTGGGTTTTTTC+TGG - chr8_3:41956082-41956101 Msa1288790:three_prime_UTR 35.0%
! TCTGAAAAGGTTGCTATTCA+AGG - chr8_3:41956291-41956310 Msa1288790:three_prime_UTR 35.0%
AGTGAAAGAGTAATGTAGGT+TGG - chr8_3:41956548-41956567 Msa1288790:three_prime_UTR 35.0%
TTCCAAATATCAAGCCTGAA+CGG + chr8_3:41956954-41956973 None:intergenic 35.0%
TGAATGTGGGAAATTATCGA+TGG + chr8_3:41957047-41957066 None:intergenic 35.0%
! AATTCATGCATTTGGGACAT+CGG + chr8_3:41957168-41957187 None:intergenic 35.0%
GATCCTGAATTCATGCATTT+GGG + chr8_3:41957175-41957194 None:intergenic 35.0%
ACTTTGATTCACTGCAATCA+GGG + chr8_3:41957197-41957216 None:intergenic 35.0%
AACTTTGATTCACTGCAATC+AGG + chr8_3:41957198-41957217 None:intergenic 35.0%
GTGAATCAAAGTTCCATTTC+AGG - chr8_3:41957205-41957224 Msa1288790:intron 35.0%
TAAGACACCATCAAATGCAA+TGG + chr8_3:41957366-41957385 None:intergenic 35.0%
TGGTTATATATGTGGGTTTC+AGG - chr8_3:41957391-41957410 Msa1288790:intron 35.0%
TTATATATGTGGGTTTCAGG+AGG - chr8_3:41957394-41957413 Msa1288790:intron 35.0%
CTAATTTCAAGAAAGGTGGA+TGG - chr8_3:41957931-41957950 Msa1288790:intron 35.0%
ATATCCTCTTATGTGAGGTA+TGG - chr8_3:41957967-41957986 Msa1288790:intron 35.0%
TATACCATACCTCACATAAG+AGG + chr8_3:41957974-41957993 None:intergenic 35.0%
CACAGATGTATGAGAATGAA+GGG + chr8_3:41958112-41958131 None:intergenic 35.0%
ACACAGATGTATGAGAATGA+AGG + chr8_3:41958113-41958132 None:intergenic 35.0%
TTCATTCTCATACATCTGTG+TGG - chr8_3:41958112-41958131 Msa1288790:intron 35.0%
!! TTTGGTTTGTTTCTCTGGTT+TGG + chr8_3:41958390-41958409 None:intergenic 35.0%
!! TCACATTTGGTTTGTTTCTC+TGG + chr8_3:41958395-41958414 None:intergenic 35.0%
AGAGAAACAAACCAAATGTG+AGG - chr8_3:41958394-41958413 Msa1288790:intron 35.0%
TCATCCTACAAATGTTTCCA+GGG + chr8_3:41958494-41958513 None:intergenic 35.0%
ACATATACAAGTATCTGGGT+TGG + chr8_3:41958744-41958763 None:intergenic 35.0%
TGAAATAGCAAAGGTGGTTT+CGG - chr8_3:41958884-41958903 Msa1288790:intron 35.0%
!!! CGATACCTCGTTTTTTTAAC+TGG + chr8_3:41959136-41959155 None:intergenic 35.0%
TATCCTACTGCATAATAGGA+CGG - chr8_3:41959210-41959229 Msa1288790:intron 35.0%
!!! TGATCTTTTTTGCATCATCG+GGG + chr8_3:41959243-41959262 None:intergenic 35.0%
! ATGTGAACAATTTTCCAGAC+AGG - chr8_3:41959353-41959372 Msa1288790:CDS 35.0%
AGTTCAGGTAATTGTCTCAA+TGG - chr8_3:41959403-41959422 Msa1288790:CDS 35.0%
CCAAAACCATATTAGCTCAA+AGG + chr8_3:41959509-41959528 None:intergenic 35.0%
! CCTTTGAGCTAATATGGTTT+TGG - chr8_3:41959506-41959525 Msa1288790:intron 35.0%
! AATTGAGGGAGATCTCTTTT+TGG + chr8_3:41959703-41959722 None:intergenic 35.0%
CTTTGCTCATCAAACAATTG+AGG + chr8_3:41959718-41959737 None:intergenic 35.0%
GGCTTAATTCTATAGTACCA+TGG - chr8_3:41959872-41959891 Msa1288790:intron 35.0%
ATTAGATTGTTGTGCTACCA+TGG + chr8_3:41959892-41959911 None:intergenic 35.0%
TGGTAGCACAACAATCTAAT+TGG - chr8_3:41959892-41959911 Msa1288790:intron 35.0%
! AAGAGTTAATGGCTTGTGAT+AGG + chr8_3:41960047-41960066 None:intergenic 35.0%
CTGAACCAAACAGATATCAT+TGG - chr8_3:41960245-41960264 Msa1288790:intron 35.0%
TTTAAGAGCAGTAATGAGAG+AGG - chr8_3:41960314-41960333 Msa1288790:intron 35.0%
TAGGCAAATAAAACCAGACA+AGG - chr8_3:41960424-41960443 Msa1288790:CDS 35.0%
TACTGTATTCAGAACTTCCT+GGG + chr8_3:41960454-41960473 None:intergenic 35.0%
TTTGGAAAGCTCATTGAATC+AGG - chr8_3:41960517-41960536 Msa1288790:intron 35.0%
GAGAATATGAAAGACAAGCT+AGG - chr8_3:41960808-41960827 Msa1288790:intron 35.0%
GAAAACAGAGAAAGTAAGTG+GGG - chr8_3:41960988-41961007 Msa1288790:intron 35.0%
TTGAACATCAACTGAGTAAG+TGG + chr8_3:41961052-41961071 None:intergenic 35.0%
CTTAAGAACTCTTTGAGCTT+AGG + chr8_3:41961111-41961130 None:intergenic 35.0%
TCACAGTTTGGTATCATATC+TGG + chr8_3:41961223-41961242 None:intergenic 35.0%
AAATAGGAGTCACTTGAAGA+GGG + chr8_3:41961282-41961301 None:intergenic 35.0%
AAAATAGGAGTCACTTGAAG+AGG + chr8_3:41961283-41961302 None:intergenic 35.0%
TACACTGTCTGTAAATTCTG+GGG + chr8_3:41961332-41961351 None:intergenic 35.0%
CTTACACTGTCTGTAAATTC+TGG + chr8_3:41961334-41961353 None:intergenic 35.0%
TTGTTTAATCCCAAGTGCAT+GGG + chr8_3:41961360-41961379 None:intergenic 35.0%
ATTGTTTAATCCCAAGTGCA+TGG + chr8_3:41961361-41961380 None:intergenic 35.0%
CTATTTCCTAACAAGCTCAT+TGG + chr8_3:41961453-41961472 None:intergenic 35.0%
GAAGTTATTCGTTAATTGGG+TGG - chr8_3:41961518-41961537 Msa1288790:intron 35.0%
TATTCGTTAATTGGGTGGTT+AGG - chr8_3:41961523-41961542 Msa1288790:intron 35.0%
TTAGGAACCCAAGAATTGAA+TGG + chr8_3:41961700-41961719 None:intergenic 35.0%
ACAAAAGCTGAAAGGTTCAT+GGG - chr8_3:41961839-41961858 Msa1288790:intron 35.0%
! ATTTGCTTCTTTTACTGCCA+TGG + chr8_3:41962034-41962053 None:intergenic 35.0%
TTCTTGGTCTCAAAAAACTC+TGG - chr8_3:41962153-41962172 Msa1288790:intron 35.0%
ACAGTTCAAACAAAGACACA+AGG + chr8_3:41962183-41962202 None:intergenic 35.0%
GTCAAATCAAAGAATCGTAC+AGG - chr8_3:41962201-41962220 Msa1288790:intron 35.0%
CAATTAGACGTTAATCAGCT+TGG - chr8_3:41962257-41962276 Msa1288790:intron 35.0%
ATTAGACGTTAATCAGCTTG+GGG - chr8_3:41962259-41962278 Msa1288790:intron 35.0%
TTCTTCAACGAAAACCCAAA+TGG + chr8_3:41962412-41962431 None:intergenic 35.0%
TTCGTTGAAGAAATCATCAG+GGG - chr8_3:41962420-41962439 Msa1288790:intron 35.0%
CGATGAATAGAGAGTTGAAA+AGG - chr8_3:41962476-41962495 Msa1288790:intron 35.0%
! ATTTTTGCTAACCGCATTCA+AGG - chr8_3:41962580-41962599 Msa1288790:intron 35.0%
TGGATAGATTGCAACAACAA+AGG + chr8_3:41962661-41962680 None:intergenic 35.0%
ATGAAACATCTCAAACCGAA+AGG - chr8_3:41962992-41963011 Msa1288790:intron 35.0%
! GTTTTCCTATTATATCCCAC+GGG + chr8_3:41963084-41963103 None:intergenic 35.0%
! TAGGAAAACTAAAAGGGTAC+CGG - chr8_3:41963095-41963114 Msa1288790:intron 35.0%
! TCTCTGAGAAGATCTTTGTA+TGG + chr8_3:41963137-41963156 None:intergenic 35.0%
ATACAAAGATCTTCTCAGAG+AGG - chr8_3:41963136-41963155 Msa1288790:intron 35.0%
TACAAAGATCTTCTCAGAGA+GGG - chr8_3:41963137-41963156 Msa1288790:intron 35.0%
!! AAGTGATTTGTTCAGACTTC+TGG - chr8_3:41963167-41963186 Msa1288790:intron 35.0%
TGACAAGTGAGATACTTATG+TGG + chr8_3:41963582-41963601 None:intergenic 35.0%
TTTCTTCACCTATGCATTTG+GGG + chr8_3:41963623-41963642 None:intergenic 35.0%
AAATTGAGGGACCAATATCA+TGG - chr8_3:41963659-41963678 Msa1288790:intron 35.0%
TGCTGGATTGAAAGGAAAAA+TGG + chr8_3:41963827-41963846 None:intergenic 35.0%
!!! TTGTTTTGTTTGTTAGGCAC+TGG - chr8_3:41963907-41963926 Msa1288790:intron 35.0%
!!! TGTTTTGTTTGTTAGGCACT+GGG - chr8_3:41963908-41963927 Msa1288790:intron 35.0%
!! TTGACATTGGTACTGATAGA+TGG + chr8_3:41964024-41964043 None:intergenic 35.0%
CAAAGGATTCAGAAAGCAAA+AGG + chr8_3:41964124-41964143 None:intergenic 35.0%
GGAACAAAGAATTCAGAAAC+GGG + chr8_3:41964266-41964285 None:intergenic 35.0%
TGAATTCTTTGTTCCATCCT+TGG - chr8_3:41964271-41964290 Msa1288790:intron 35.0%
!! TGACACCTCCTTTAAAATCA+AGG + chr8_3:41964394-41964413 None:intergenic 35.0%
CAAGAGCTGTCTTGATTAAT+TGG - chr8_3:41964412-41964431 Msa1288790:intron 35.0%
!!! TCTCTGCCTTAAGTTTTGAA+AGG - chr8_3:41964503-41964522 Msa1288790:intron 35.0%
CATGTGCCTTTCAAAACTTA+AGG + chr8_3:41964512-41964531 None:intergenic 35.0%
TTTGGATCCTCCACATAATC+TGG - chr8_3:41956071-41956090 Msa1288790:three_prime_UTR 40.0%
TTGGATCCTCCACATAATCT+GGG - chr8_3:41956072-41956091 Msa1288790:three_prime_UTR 40.0%
TGAAGAATCGTCTACGAAGA+AGG - chr8_3:41956632-41956651 Msa1288790:CDS 40.0%
! TATTGTGACTTGGACTCAAG+AGG - chr8_3:41956662-41956681 Msa1288790:CDS 40.0%
GATCGTGATTCTGTCTACAT+TGG + chr8_3:41956774-41956793 None:intergenic 40.0%
AGAATCACGATCCAACTCAT+TGG - chr8_3:41956782-41956801 Msa1288790:intron 40.0%
ATTACAATTCCGGCACAGAA+GGG + chr8_3:41956833-41956852 None:intergenic 40.0%
TACCGTTCAGGCTTGATATT+TGG - chr8_3:41956949-41956968 Msa1288790:intron 40.0%
CGATAATTTCCCACATTCAC+AGG - chr8_3:41957048-41957067 Msa1288790:intron 40.0%
TGTCCCAAATGCATGAATTC+AGG - chr8_3:41957169-41957188 Msa1288790:intron 40.0%
GGATCCTGAATTCATGCATT+TGG + chr8_3:41957176-41957195 None:intergenic 40.0%
TGCAAACTAAGCACCTGAAA+TGG + chr8_3:41957221-41957240 None:intergenic 40.0%
AGAGAACAGATCGGAAATCA+TGG - chr8_3:41957428-41957447 Msa1288790:intron 40.0%
AACCGAACTGGATTGTTCAA+CGG - chr8_3:41957532-41957551 Msa1288790:intron 40.0%
AACCGTTGAACAATCCAGTT+CGG + chr8_3:41957537-41957556 None:intergenic 40.0%
!!! GTTTGATTGTGGTTTTGTCC+CGG - chr8_3:41957600-41957619 Msa1288790:intron 40.0%
ACTGCCTTAAACTGTTCAAC+CGG + chr8_3:41957622-41957641 None:intergenic 40.0%
CTACAAGACAATGCAGAAGA+AGG - chr8_3:41957784-41957803 Msa1288790:intron 40.0%
! GTAGCTGTTGACGATTTTCA+TGG - chr8_3:41957834-41957853 Msa1288790:intron 40.0%
CATAAGAGGATATCTTCGTC+TGG + chr8_3:41957960-41957979 None:intergenic 40.0%
CGAAGATATCCTCTTATGTG+AGG - chr8_3:41957962-41957981 Msa1288790:intron 40.0%
GATACTAGCAAGTTCAACGA+TGG + chr8_3:41958148-41958167 None:intergenic 40.0%
!! CGTTGAACTTGCTAGTATCA+CGG - chr8_3:41958149-41958168 Msa1288790:intron 40.0%
ATGAGAATAGGCAAGGCTAT+GGG + chr8_3:41958190-41958209 None:intergenic 40.0%
! ATAGCCTTGCCTATTCTCAT+GGG - chr8_3:41958190-41958209 Msa1288790:intron 40.0%
AACAACCTACCCATGAGAAT+AGG + chr8_3:41958202-41958221 None:intergenic 40.0%
! CATTTTACAACTGCTCTCGA+AGG + chr8_3:41958288-41958307 None:intergenic 40.0%
ACAAACCAAATGTGAGGTGT+AGG - chr8_3:41958400-41958419 Msa1288790:intron 40.0%
! TCCACAAGGTGTCAATTTAG+TGG - chr8_3:41958426-41958445 Msa1288790:intron 40.0%
ACCACTAAATTGACACCTTG+TGG + chr8_3:41958430-41958449 None:intergenic 40.0%
AACGGTCTCTTGAGATAACA+AGG + chr8_3:41958463-41958482 None:intergenic 40.0%
ATCCTACAAATGTTTCCAGG+GGG + chr8_3:41958492-41958511 None:intergenic 40.0%
CATCCTACAAATGTTTCCAG+GGG + chr8_3:41958493-41958512 None:intergenic 40.0%
GTCATCCTACAAATGTTTCC+AGG + chr8_3:41958495-41958514 None:intergenic 40.0%
CAATGCCAAAATTGTTAGGC+TGG + chr8_3:41958618-41958637 None:intergenic 40.0%
CTGGCAATGCCAAAATTGTT+AGG + chr8_3:41958622-41958641 None:intergenic 40.0%
!! TACAAGTATCTGGGTTGGTT+TGG + chr8_3:41958739-41958758 None:intergenic 40.0%
CGGATGTAGTTTCTGTTATC+TGG + chr8_3:41958775-41958794 None:intergenic 40.0%
!! CAGATGGACTGAAATAGCAA+AGG - chr8_3:41958875-41958894 Msa1288790:intron 40.0%
! ATGGACTGAAATAGCAAAGG+TGG - chr8_3:41958878-41958897 Msa1288790:intron 40.0%
GAAATAGCAAAGGTGGTTTC+GGG - chr8_3:41958885-41958904 Msa1288790:intron 40.0%
TCCTACCTTCTTGCAAATAC+TGG - chr8_3:41958927-41958946 Msa1288790:intron 40.0%
TCCAGTATTTGCAAGAAGGT+AGG + chr8_3:41958931-41958950 None:intergenic 40.0%
ACCTTCTTGCAAATACTGGA+CGG - chr8_3:41958931-41958950 Msa1288790:intron 40.0%
!!! CATTTTTTCCCCTCTTCTTG+CGG + chr8_3:41959039-41959058 None:intergenic 40.0%
!!! CCTCGTTTTTTTAACTGGCA+TGG + chr8_3:41959131-41959150 None:intergenic 40.0%
CCATGCCAGTTAAAAAAACG+AGG - chr8_3:41959128-41959147 Msa1288790:intron 40.0%
! TTTTGCATCATCGGGGATAT+GGG + chr8_3:41959236-41959255 None:intergenic 40.0%
! TTTTTGCATCATCGGGGATA+TGG + chr8_3:41959237-41959256 None:intergenic 40.0%
TGAACTGCTGATCTTGTCAT+TGG + chr8_3:41959389-41959408 None:intergenic 40.0%
AATGACAAGATCAGCAGTTC+AGG - chr8_3:41959388-41959407 Msa1288790:CDS 40.0%
GATAACCAAGGACAGAAAAG+TGG - chr8_3:41959445-41959464 Msa1288790:intron 40.0%
GGTCATCCTTTGAGCTAATA+TGG - chr8_3:41959500-41959519 Msa1288790:intron 40.0%
CAGAGAACATGGAAAGAGTA+TGG - chr8_3:41959616-41959635 Msa1288790:intron 40.0%
! GAACATGGAAAGAGTATGGA+AGG - chr8_3:41959620-41959639 Msa1288790:intron 40.0%
! TTTATACGTGACTCTGGAAG+TGG + chr8_3:41960149-41960168 None:intergenic 40.0%
! TGGTTCAGAAACTCTAGAAG+TGG + chr8_3:41960233-41960252 None:intergenic 40.0%
GCTTGTAAGTCATACAGTCA+AGG - chr8_3:41960289-41960308 Msa1288790:intron 40.0%
GAACTTAAACTACCTCAAGC+AGG + chr8_3:41960345-41960364 None:intergenic 40.0%
ACTGTATTCAGAACTTCCTG+GGG + chr8_3:41960453-41960472 None:intergenic 40.0%
GTACTGTATTCAGAACTTCC+TGG + chr8_3:41960455-41960474 None:intergenic 40.0%
!! GGAAGTTCTGAATACAGTAC+AGG - chr8_3:41960455-41960474 Msa1288790:intron 40.0%
AGCTCATTGAATCAGGATAC+TGG - chr8_3:41960524-41960543 Msa1288790:intron 40.0%
GAAATGCAAGCTACACAACT+CGG - chr8_3:41960551-41960570 Msa1288790:intron 40.0%
AAATGCAAGCTACACAACTC+GGG - chr8_3:41960552-41960571 Msa1288790:intron 40.0%
! AGTATGTGAAGGTGTGAAAG+AGG - chr8_3:41960586-41960605 Msa1288790:intron 40.0%
GTGAAAGAGGTTCTTTCTAC+TGG - chr8_3:41960599-41960618 Msa1288790:intron 40.0%
GGTTCTTTCTACTGGAAAAG+TGG - chr8_3:41960607-41960626 Msa1288790:intron 40.0%
TCTACTGGAAAAGTGGAACA+AGG - chr8_3:41960614-41960633 Msa1288790:intron 40.0%
TCTTTGAGCTTAGGTGGTTA+GGG + chr8_3:41961102-41961121 None:intergenic 40.0%
AAGAACTCTTTGAGCTTAGG+TGG + chr8_3:41961108-41961127 None:intergenic 40.0%
AATAGGAGTCACTTGAAGAG+GGG + chr8_3:41961281-41961300 None:intergenic 40.0%
! GACTCCTATTTTCAGATCCT+TGG - chr8_3:41961291-41961310 Msa1288790:CDS 40.0%
TCAGCCAAGGATCTGAAAAT+AGG + chr8_3:41961298-41961317 None:intergenic 40.0%
! ATTTTCAGATCCTTGGCTGA+AGG - chr8_3:41961298-41961317 Msa1288790:CDS 40.0%
TGTAAGTTACCCATGCACTT+GGG - chr8_3:41961348-41961367 Msa1288790:CDS 40.0%
AGGGAGTTTATTGCGTTAAG+AGG - chr8_3:41961562-41961581 Msa1288790:CDS 40.0%
GGGAGTTTATTGCGTTAAGA+GGG - chr8_3:41961563-41961582 Msa1288790:CDS 40.0%
GGATTTGTCCCTGTAAAATC+CGG + chr8_3:41961806-41961825 None:intergenic 40.0%
TTTACAGGGACAAATCCCAT+TGG - chr8_3:41961809-41961828 Msa1288790:intron 40.0%
TTACAGGGACAAATCCCATT+GGG - chr8_3:41961810-41961829 Msa1288790:intron 40.0%
CACAAAAGCTGAAAGGTTCA+TGG - chr8_3:41961838-41961857 Msa1288790:intron 40.0%
TTGGGAATCAAGAACCAGAA+AGG - chr8_3:41961975-41961994 Msa1288790:intron 40.0%
AATCAAGAACCAGAAAGGTC+AGG - chr8_3:41961980-41961999 Msa1288790:intron 40.0%
!! TTTAATGCAAGTGGGTTGCA+TGG - chr8_3:41962060-41962079 Msa1288790:intron 40.0%
AGAATCGTACAGGGAATACA+AGG - chr8_3:41962211-41962230 Msa1288790:intron 40.0%
!!! ATTGTTTTGGTGGAGTGGTT+TGG + chr8_3:41962241-41962260 None:intergenic 40.0%
!!! GTCTAATTGTTTTGGTGGAG+TGG + chr8_3:41962246-41962265 None:intergenic 40.0%
GATGCCAAATGATTAGCATC+CGG + chr8_3:41962342-41962361 None:intergenic 40.0%
GGATGCTAATCATTTGGCAT+CGG - chr8_3:41962341-41962360 Msa1288790:intron 40.0%
AGTCATGAACGACAACCATT+TGG - chr8_3:41962394-41962413 Msa1288790:intron 40.0%
GTCATGAACGACAACCATTT+GGG - chr8_3:41962395-41962414 Msa1288790:intron 40.0%
AAAAGGGCCTTTGGTATGTT+GGG - chr8_3:41962493-41962512 Msa1288790:intron 40.0%
CTTTGGTATGTTGGGTTCAA+GGG - chr8_3:41962501-41962520 Msa1288790:intron 40.0%
GGTTCAAGGGTAAGTCTAAT+AGG - chr8_3:41962514-41962533 Msa1288790:intron 40.0%
AAGGGTAAGTCTAATAGGTC+TGG - chr8_3:41962519-41962538 Msa1288790:intron 40.0%
!! CTTGGATTAGTCCTTGAATG+CGG + chr8_3:41962594-41962613 None:intergenic 40.0%
AAGGACTAATCCAAGGAAGA+GGG - chr8_3:41962599-41962618 Msa1288790:intron 40.0%
GATTGCAACAACAAAGGACA+AGG + chr8_3:41962655-41962674 None:intergenic 40.0%
AAACTATGAAACACGGACAC+CGG + chr8_3:41962824-41962843 None:intergenic 40.0%
ACGAGGATACATGTATCAGA+GGG + chr8_3:41962943-41962962 None:intergenic 40.0%
TGTCAAGGTCTCTTACCTTT+CGG + chr8_3:41963010-41963029 None:intergenic 40.0%
TGGAAAGAATAGAGCAGAAC+CGG + chr8_3:41963117-41963136 None:intergenic 40.0%
!! TGCATTGGTTGCAAACAATG+GGG + chr8_3:41963237-41963256 None:intergenic 40.0%
!! CTGCATTGGTTGCAAACAAT+GGG + chr8_3:41963238-41963257 None:intergenic 40.0%
TAAGTGAAAACCCACCTAGA+CGG - chr8_3:41963534-41963553 Msa1288790:intron 40.0%
GTCTCATGTCATCAATTCAG+TGG - chr8_3:41963556-41963575 Msa1288790:intron 40.0%
AAAACCAACCCCAAATGCAT+AGG - chr8_3:41963612-41963631 Msa1288790:intron 40.0%
! TTTTCCTTTCAATCCAGCAC+TGG - chr8_3:41963828-41963847 Msa1288790:intron 40.0%
TTCAGGAAAAGAGCTTCCTA+AGG - chr8_3:41963977-41963996 Msa1288790:intron 40.0%
AGCTTCCTAAGGAAAACACT+GGG - chr8_3:41963988-41964007 Msa1288790:intron 40.0%
AATTGTCAAGGATGGAGCAA+AGG + chr8_3:41964141-41964160 None:intergenic 40.0%
TTGCTCCATCCTTGACAATT+CGG - chr8_3:41964141-41964160 Msa1288790:intron 40.0%
TTGTTCCATCCTTGGCATTT+CGG - chr8_3:41964279-41964298 Msa1288790:intron 40.0%
AATGAGCTATCTCTAGACCA+AGG - chr8_3:41964353-41964372 Msa1288790:five_prime_UTR 40.0%
!! GGAACTTTGAAGTACTTCCT+TGG + chr8_3:41964373-41964392 None:intergenic 40.0%
TTATGCACACACACACAATC+AGG + chr8_3:41964710-41964729 None:intergenic 40.0%
AGAGGATAGTGAGAGATCAG+AGG - chr8_3:41956260-41956279 Msa1288790:three_prime_UTR 45.0%
GATAGTGAGAGATCAGAGGA+AGG - chr8_3:41956264-41956283 Msa1288790:three_prime_UTR 45.0%
AGAGGAAGGAGAGTCTGAAA+AGG - chr8_3:41956278-41956297 Msa1288790:three_prime_UTR 45.0%
ATACGACAATGACACGTGGA+CGG + chr8_3:41956496-41956515 None:intergenic 45.0%
CCAAATACGACAATGACACG+TGG + chr8_3:41956500-41956519 None:intergenic 45.0%
! CCACGTGTCATTGTCGTATT+TGG - chr8_3:41956497-41956516 Msa1288790:three_prime_UTR 45.0%
TTCGTATCCATCGTTTGGCT+CGG + chr8_3:41956591-41956610 None:intergenic 45.0%
CCTTCTTCGTATCCATCGTT+TGG + chr8_3:41956596-41956615 None:intergenic 45.0%
CCAAACGATGGATACGAAGA+AGG - chr8_3:41956593-41956612 Msa1288790:CDS 45.0%
ACGAAGAAGGAGAAGCAACA+AGG - chr8_3:41956606-41956625 Msa1288790:CDS 45.0%
CGAAGAAGGAGAAGCAACAA+GGG - chr8_3:41956607-41956626 Msa1288790:CDS 45.0%
AATCGTCTACGAAGAAGGAG+CGG - chr8_3:41956637-41956656 Msa1288790:CDS 45.0%
TCACGATCCAACTCATTGGA+TGG - chr8_3:41956786-41956805 Msa1288790:intron 45.0%
ACTCATGCCATCCAATGAGT+TGG + chr8_3:41956796-41956815 None:intergenic 45.0%
GATTACAATTCCGGCACAGA+AGG + chr8_3:41956834-41956853 None:intergenic 45.0%
TCTGTGCCGGAATTGTAATC+TGG - chr8_3:41956834-41956853 Msa1288790:intron 45.0%
TGCCGGAATTGTAATCTGGT+GGG - chr8_3:41956838-41956857 Msa1288790:intron 45.0%
CTCCCACCAGATTACAATTC+CGG + chr8_3:41956843-41956862 None:intergenic 45.0%
GAATTGTAATCTGGTGGGAG+CGG - chr8_3:41956843-41956862 Msa1288790:intron 45.0%
! ACAAGTTCTCACGGCGATTT+TGG + chr8_3:41956869-41956888 None:intergenic 45.0%
AAAATCGCCGTGAGAACTTG+TGG - chr8_3:41956868-41956887 Msa1288790:intron 45.0%
AAATCGCCGTGAGAACTTGT+GGG - chr8_3:41956869-41956888 Msa1288790:intron 45.0%
GTGAGGAAGACGCACAAAAT+CGG + chr8_3:41956918-41956937 None:intergenic 45.0%
TTCCCACATTCACAGGACAA+AGG - chr8_3:41957055-41957074 Msa1288790:intron 45.0%
CACCTTTGTCCTGTGAATGT+GGG + chr8_3:41957060-41957079 None:intergenic 45.0%
GGCCGTTCAAGCTTGATATT+TGG - chr8_3:41957079-41957098 Msa1288790:intron 45.0%
AATACTTAAGCTTCACGGGG+AGG + chr8_3:41957299-41957318 None:intergenic 45.0%
TGTGAACCATCACCAGTCTA+CGG - chr8_3:41957561-41957580 Msa1288790:intron 45.0%
CAAATAACCGAACCGTAGAC+TGG + chr8_3:41957576-41957595 None:intergenic 45.0%
TGTCCCGGTTGAACAGTTTA+AGG - chr8_3:41957615-41957634 Msa1288790:intron 45.0%
CTGCCTTAAACTGTTCAACC+GGG + chr8_3:41957621-41957640 None:intergenic 45.0%
CATGAGAATAGGCAAGGCTA+TGG + chr8_3:41958191-41958210 None:intergenic 45.0%
! CATAGCCTTGCCTATTCTCA+TGG - chr8_3:41958189-41958208 Msa1288790:intron 45.0%
TAGTACTAAGCTGACACCTC+AGG + chr8_3:41958225-41958244 None:intergenic 45.0%
GACAACCTACACCTCACATT+TGG + chr8_3:41958408-41958427 None:intergenic 45.0%
TCCTACAAATGTTTCCAGGG+GGG + chr8_3:41958491-41958510 None:intergenic 45.0%
!! TTTTGGGTCTGTAGACGAAG+CGG - chr8_3:41958531-41958550 Msa1288790:intron 45.0%
GCAATGGTTGTGAGTTTCAG+TGG + chr8_3:41958563-41958582 None:intergenic 45.0%
TGAAACTCACAACCATTGCG+AGG - chr8_3:41958564-41958583 Msa1288790:intron 45.0%
!! CTGGACGGCTATTTTGTGAA+CGG - chr8_3:41958946-41958965 Msa1288790:intron 45.0%
TGTTGAGCTAATTCGGCAAG+TGG + chr8_3:41959325-41959344 None:intergenic 45.0%
TTGGAAACATGATGCCTGTC+TGG + chr8_3:41959370-41959389 None:intergenic 45.0%
TTGGTTCATCTTGCTTGTCC+AGG - chr8_3:41959525-41959544 Msa1288790:intron 45.0%
! TGGAAAGAGTATGGAAGGTG+AGG - chr8_3:41959625-41959644 Msa1288790:intron 45.0%
! TCAGAAACTCTAGAAGTGGC+TGG + chr8_3:41960229-41960248 None:intergenic 45.0%
AATGCAAGCTACACAACTCG+GGG - chr8_3:41960553-41960572 Msa1288790:intron 45.0%
TTTGAGCTTAGGTGGTTAGG+GGG + chr8_3:41961100-41961119 None:intergenic 45.0%
CTTTGAGCTTAGGTGGTTAG+GGG + chr8_3:41961101-41961120 None:intergenic 45.0%
CTCTTTGAGCTTAGGTGGTT+AGG + chr8_3:41961103-41961122 None:intergenic 45.0%
GGAACAGTTCATTCTTGGCA+AGG + chr8_3:41961260-41961279 None:intergenic 45.0%
AGAGGGGAACAGTTCATTCT+TGG + chr8_3:41961265-41961284 None:intergenic 45.0%
!! CTGTCTGTAAATTCTGGGGT+TGG + chr8_3:41961328-41961347 None:intergenic 45.0%
GTGTAAGTTACCCATGCACT+TGG - chr8_3:41961347-41961366 Msa1288790:CDS 45.0%
! GGGATACCAATGAGCTTGTT+AGG - chr8_3:41961444-41961463 Msa1288790:intron 45.0%
GGAAGTGAGGAGAGAAAACA+GGG + chr8_3:41961646-41961665 None:intergenic 45.0%
TACCAGAAATGGAGGACATG+TGG - chr8_3:41961762-41961781 Msa1288790:intron 45.0%
ACCAGAAATGGAGGACATGT+GGG - chr8_3:41961763-41961782 Msa1288790:intron 45.0%
! TGGAGTTGCCGGATTTTACA+GGG - chr8_3:41961795-41961814 Msa1288790:CDS 45.0%
! GCTTTTGTGATCCACCCAAT+GGG + chr8_3:41961827-41961846 None:intergenic 45.0%
! AGCTTTTGTGATCCACCCAA+TGG + chr8_3:41961828-41961847 None:intergenic 45.0%
GGTGGATCACAAAAGCTGAA+AGG - chr8_3:41961831-41961850 Msa1288790:intron 45.0%
AGCTGAAAGGTTCATGGGTT+CGG - chr8_3:41961844-41961863 Msa1288790:intron 45.0%
! GCAATGGGCTTTCATGAGAA+TGG - chr8_3:41961873-41961892 Msa1288790:intron 45.0%
ATGGGCTTTCATGAGAATGG+AGG - chr8_3:41961876-41961895 Msa1288790:intron 45.0%
TGGGCTTTCATGAGAATGGA+GGG - chr8_3:41961877-41961896 Msa1288790:intron 45.0%
! AGAAGCCATGTGTTGGTGTA+AGG - chr8_3:41961900-41961919 Msa1288790:intron 45.0%
GAGGACTTGGATTTAGTGCA+GGG - chr8_3:41961922-41961941 Msa1288790:intron 45.0%
AGAACCAGAAAGGTCAGGAA+TGG - chr8_3:41961985-41962004 Msa1288790:intron 45.0%
TACTCCATTCCTGACCTTTC+TGG + chr8_3:41961992-41962011 None:intergenic 45.0%
TACTGCCATGGCTTCTTCAT+CGG + chr8_3:41962022-41962041 None:intergenic 45.0%
!! ACAGCGAGAATACTGGTTCT+TGG - chr8_3:41962137-41962156 Msa1288790:intron 45.0%
ACTTACACATTGTGCACCAC+TGG - chr8_3:41962285-41962304 Msa1288790:intron 45.0%
AGCTCCGGATGCTAATCATT+TGG - chr8_3:41962335-41962354 Msa1288790:intron 45.0%
ATCGGACCTTAAACAGCCAT+AGG - chr8_3:41962359-41962378 Msa1288790:intron 45.0%
CAAGCACCTATGGCTGTTTA+AGG + chr8_3:41962368-41962387 None:intergenic 45.0%
AGAGAGTTGAAAAGGGCCTT+TGG - chr8_3:41962484-41962503 Msa1288790:intron 45.0%
GAAAAGGGCCTTTGGTATGT+TGG - chr8_3:41962492-41962511 Msa1288790:intron 45.0%
CCTTGAACCCAACATACCAA+AGG + chr8_3:41962503-41962522 None:intergenic 45.0%
CCTTTGGTATGTTGGGTTCA+AGG - chr8_3:41962500-41962519 Msa1288790:intron 45.0%
TCTAATAGGTCTGGCCCAAA+TGG - chr8_3:41962528-41962547 Msa1288790:intron 45.0%
CGCATTCAAGGACTAATCCA+AGG - chr8_3:41962592-41962611 Msa1288790:intron 45.0%
CAAGGACTAATCCAAGGAAG+AGG - chr8_3:41962598-41962617 Msa1288790:intron 45.0%
GTTGTTGCAATCTATCCAGC+AGG - chr8_3:41962663-41962682 Msa1288790:intron 45.0%
!! TTGATCAGAAGTGTTCCTGC+TGG + chr8_3:41962681-41962700 None:intergenic 45.0%
CTTCTGATCAAATGCGTGTC+CGG - chr8_3:41962690-41962709 Msa1288790:intron 45.0%
TATCCGACATGTGTCAGTGT+CGG - chr8_3:41962713-41962732 Msa1288790:CDS 45.0%
GAAAGCAAATCGGAAGGAAC+CGG + chr8_3:41962877-41962896 None:intergenic 45.0%
GAAAACGGCGGAAAGCAAAT+CGG + chr8_3:41962887-41962906 None:intergenic 45.0%
ACACCCACCTAAGGAGAAAA+CGG + chr8_3:41962902-41962921 None:intergenic 45.0%
CGAGGATACATGTATCAGAG+GGG + chr8_3:41962942-41962961 None:intergenic 45.0%
GACGAGGATACATGTATCAG+AGG + chr8_3:41962944-41962963 None:intergenic 45.0%
GAAAGGTAAGAGACCTTGAC+AGG - chr8_3:41963009-41963028 Msa1288790:intron 45.0%
TCTGTGGATGGAGCTGAAAA+TGG - chr8_3:41963058-41963077 Msa1288790:intron 45.0%
AATGGCCCGTGGGATATAAT+AGG - chr8_3:41963076-41963095 Msa1288790:intron 45.0%
!! GCTGCATTGGTTGCAAACAA+TGG + chr8_3:41963239-41963258 None:intergenic 45.0%
! TTGATGACATGAGACCGTCT+AGG + chr8_3:41963551-41963570 None:intergenic 45.0%
! TTCACCTATGCATTTGGGGT+TGG + chr8_3:41963619-41963638 None:intergenic 45.0%
TAACTCTAATGCACCAGTGC+TGG + chr8_3:41963844-41963863 None:intergenic 45.0%
GAGCTTCCTAAGGAAAACAC+TGG - chr8_3:41963987-41964006 Msa1288790:intron 45.0%
! CGGTTTGTATGGGTTGACAT+TGG + chr8_3:41964037-41964056 None:intergenic 45.0%
TATTGAAGGGCTCTTACGCA+AGG + chr8_3:41964063-41964082 None:intergenic 45.0%
!!! TAAAAATTAACTTTTAATAT+TGG + chr8_3:41960014-41960033 None:intergenic 5.0%
AGGAGCGGCATATTGTGACT+TGG - chr8_3:41956652-41956671 Msa1288790:CDS 50.0%
ATCTTGCAACCCTTCTGTGC+CGG - chr8_3:41956821-41956840 Msa1288790:intron 50.0%
GTGCCGGAATTGTAATCTGG+TGG - chr8_3:41956837-41956856 Msa1288790:intron 50.0%
ACAGCTCCCACAAGTTCTCA+CGG + chr8_3:41956878-41956897 None:intergenic 50.0%
CCACCTTTGTCCTGTGAATG+TGG + chr8_3:41957061-41957080 None:intergenic 50.0%
CCACATTCACAGGACAAAGG+TGG - chr8_3:41957058-41957077 Msa1288790:intron 50.0%
! CTACCAAGAGTGTGTTGCGT+GGG - chr8_3:41957259-41957278 Msa1288790:intron 50.0%
! TACCAAGAGTGTGTTGCGTG+GGG - chr8_3:41957260-41957279 Msa1288790:intron 50.0%
TGTGTTGCGTGGGGATCAAA+CGG - chr8_3:41957269-41957288 Msa1288790:intron 50.0%
ACCATCACCAGTCTACGGTT+CGG - chr8_3:41957566-41957585 Msa1288790:intron 50.0%
GTTGAACCATGACCACCATG+AGG - chr8_3:41957640-41957659 Msa1288790:intron 50.0%
AAACCTGAGAGACCTCATGG+TGG + chr8_3:41957655-41957674 None:intergenic 50.0%
ACCATGAGGTCTCTCAGGTT+TGG - chr8_3:41957654-41957673 Msa1288790:intron 50.0%
ACCAAACCTGAGAGACCTCA+TGG + chr8_3:41957658-41957677 None:intergenic 50.0%
CCTACCCATGAGAATAGGCA+AGG + chr8_3:41958197-41958216 None:intergenic 50.0%
CCTTGCCTATTCTCATGGGT+AGG - chr8_3:41958194-41958213 Msa1288790:intron 50.0%
TCATGGGTAGGTTGTTCCTG+AGG - chr8_3:41958206-41958225 Msa1288790:intron 50.0%
TGAGGTGTAGGTTGTCCACA+AGG - chr8_3:41958412-41958431 Msa1288790:intron 50.0%
GTTTCCAGGGGGGATTTGAA+CGG + chr8_3:41958481-41958500 None:intergenic 50.0%
TCCCCCCTGGAAACATTTGT+AGG - chr8_3:41958487-41958506 Msa1288790:intron 50.0%
! GGCGTCCAGCCTAACAATTT+TGG - chr8_3:41958610-41958629 Msa1288790:intron 50.0%
TTGGCATTGCCAGTTGAGCT+AGG - chr8_3:41958629-41958648 Msa1288790:intron 50.0%
GCCAGTTGAGCTAGGCTTTA+CGG - chr8_3:41958637-41958656 Msa1288790:intron 50.0%
CCAGTTGAGCTAGGCTTTAC+GGG - chr8_3:41958638-41958657 Msa1288790:intron 50.0%
TAGCAAAGGTGGTTTCGGGA+AGG - chr8_3:41958889-41958908 Msa1288790:intron 50.0%
GCCGTCCAGTATTTGCAAGA+AGG + chr8_3:41958935-41958954 None:intergenic 50.0%
AATTCGGCAAGTGGTGCTCT+TGG + chr8_3:41959316-41959335 None:intergenic 50.0%
!! TCGGTCCACTTTTCTGTCCT+TGG + chr8_3:41959453-41959472 None:intergenic 50.0%
AGAGAGGCAATTCCTGCTTG+AGG - chr8_3:41960330-41960349 Msa1288790:CDS 50.0%
TTGAGCTTAGGTGGTTAGGG+GGG + chr8_3:41961099-41961118 None:intergenic 50.0%
GGTTGGAATTCCTTCAGCCA+AGG + chr8_3:41961311-41961330 None:intergenic 50.0%
GGGAAGTGAGGAGAGAAAAC+AGG + chr8_3:41961647-41961666 None:intergenic 50.0%
!! TCCTCCATTTCTGGTAGAGC+TGG + chr8_3:41961758-41961777 None:intergenic 50.0%
! GTGGAGTTGCCGGATTTTAC+AGG - chr8_3:41961794-41961813 Msa1288790:CDS 50.0%
! AGCCATGTGTTGGTGTAAGG+AGG - chr8_3:41961903-41961922 Msa1288790:intron 50.0%
GTCCTCCTTACACCAACACA+TGG + chr8_3:41961908-41961927 None:intergenic 50.0%
! GTGTTGGTGTAAGGAGGACT+TGG - chr8_3:41961909-41961928 Msa1288790:intron 50.0%
GGAGGACTTGGATTTAGTGC+AGG - chr8_3:41961921-41961940 Msa1288790:intron 50.0%
AGACACCGATGAAGAAGCCA+TGG - chr8_3:41962014-41962033 Msa1288790:intron 50.0%
AGACGTTAATCAGCTTGGGG+TGG - chr8_3:41962262-41962281 Msa1288790:intron 50.0%
AAACAGCCATAGGTGCTTGC+TGG - chr8_3:41962369-41962388 Msa1288790:intron 50.0%
CTAATCCAAGGAAGAGGGTG+AGG - chr8_3:41962604-41962623 Msa1288790:intron 50.0%
GGAATTCCTGCACTCAAGTC+AGG + chr8_3:41962634-41962653 None:intergenic 50.0%
CACTGACACATGTCGGATAC+CGG + chr8_3:41962712-41962731 None:intergenic 50.0%
TGTCCGACACTGACACATGT+CGG + chr8_3:41962719-41962738 None:intergenic 50.0%
GAACGGGGACATCATGCATA+TGG + chr8_3:41962855-41962874 None:intergenic 50.0%
TATGCATGATGTCCCCGTTC+CGG - chr8_3:41962855-41962874 Msa1288790:intron 50.0%
AAATCGGAAGGAACCGGAAC+GGG + chr8_3:41962871-41962890 None:intergenic 50.0%
CAAATCGGAAGGAACCGGAA+CGG + chr8_3:41962872-41962891 None:intergenic 50.0%
!! CTTTCCGCCGTTTTCTCCTT+AGG - chr8_3:41962892-41962911 Msa1288790:intron 50.0%
ATAAGCGTCACCCGAAGGAT+GGG + chr8_3:41962974-41962993 None:intergenic 50.0%
GTTTCATAAGCGTCACCCGA+AGG + chr8_3:41962979-41962998 None:intergenic 50.0%
GTAAGAGACCTTGACAGGAG+TGG - chr8_3:41963014-41963033 Msa1288790:intron 50.0%
GACATCTACCACTCCTGTCA+AGG + chr8_3:41963025-41963044 None:intergenic 50.0%
! GTCACGAGGAGCATAATCTG+TGG - chr8_3:41963042-41963061 Msa1288790:intron 50.0%
! CGAGGAGCATAATCTGTGGA+TGG - chr8_3:41963046-41963065 Msa1288790:intron 50.0%
TGACATGAGACCGTCTAGGT+GGG + chr8_3:41963547-41963566 None:intergenic 50.0%
ATGACATGAGACCGTCTAGG+TGG + chr8_3:41963548-41963567 None:intergenic 50.0%
! TGCACCAGTGCTGGATTGAA+AGG + chr8_3:41963835-41963854 None:intergenic 50.0%
! CCACTCCCAGTGTTTTCCTT+AGG + chr8_3:41963996-41964015 None:intergenic 50.0%
CCTAAGGAAAACACTGGGAG+TGG - chr8_3:41963993-41964012 Msa1288790:intron 50.0%
GAGAGCCGAATTGTCAAGGA+TGG + chr8_3:41964149-41964168 None:intergenic 50.0%
! CTCTGAGAGCCGAATTGTCA+AGG + chr8_3:41964153-41964172 None:intergenic 50.0%
GAAAGCCGAAATGCCAAGGA+TGG + chr8_3:41964287-41964306 None:intergenic 50.0%
! CTCTGAAAGCCGAAATGCCA+AGG + chr8_3:41964291-41964310 None:intergenic 50.0%
!! GGTTGGCTTCACTCACTCGA+AGG - chr8_3:41956565-41956584 Msa1288790:three_prime_UTR 55.0%
CCACGCAACACACTCTTGGT+AGG + chr8_3:41957261-41957280 None:intergenic 55.0%
! CCTACCAAGAGTGTGTTGCG+TGG - chr8_3:41957258-41957277 Msa1288790:intron 55.0%
ATCCCCACGCAACACACTCT+TGG + chr8_3:41957265-41957284 None:intergenic 55.0%
CTTAAGCTTCACGGGGAGGA+TGG + chr8_3:41957295-41957314 None:intergenic 55.0%
ACCGAACCGTAGACTGGTGA+TGG + chr8_3:41957570-41957589 None:intergenic 55.0%
GAGAGACCTCATGGTGGTCA+TGG + chr8_3:41957649-41957668 None:intergenic 55.0%
TGACCACCATGAGGTCTCTC+AGG - chr8_3:41957649-41957668 Msa1288790:intron 55.0%
TCACAACCATTGCGAGGTCC+CGG - chr8_3:41958570-41958589 Msa1288790:intron 55.0%
CTTCACTCGGGTTCAAACCC+GGG + chr8_3:41958591-41958610 None:intergenic 55.0%
CCTTCACTCGGGTTCAAACC+CGG + chr8_3:41958592-41958611 None:intergenic 55.0%
TTAGGCTGGACGCCTTCACT+CGG + chr8_3:41958604-41958623 None:intergenic 55.0%
CCCGTAAAGCCTAGCTCAAC+TGG + chr8_3:41958641-41958660 None:intergenic 55.0%
TCTCCACACTCCGCAAGAAG+AGG - chr8_3:41959026-41959045 Msa1288790:intron 55.0%
CTCCACACTCCGCAAGAAGA+GGG - chr8_3:41959027-41959046 Msa1288790:intron 55.0%
TCCACACTCCGCAAGAAGAG+GGG - chr8_3:41959028-41959047 Msa1288790:intron 55.0%
GGGCCGTCCTATTATGCAGT+AGG + chr8_3:41959216-41959235 None:intergenic 55.0%
! TACGTGACTCTGGAAGTGGC+TGG + chr8_3:41960145-41960164 None:intergenic 55.0%
AAACCAGACAAGGACTCCCC+AGG - chr8_3:41960434-41960453 Msa1288790:intron 55.0%
TGAGCTTAGGTGGTTAGGGG+GGG + chr8_3:41961098-41961117 None:intergenic 55.0%
AGCGCCAGCTCTACCAGAAA+TGG - chr8_3:41961751-41961770 Msa1288790:intron 55.0%
GCCAGCTCTACCAGAAATGG+AGG - chr8_3:41961754-41961773 Msa1288790:intron 55.0%
GCCCACATGTCCTCCATTTC+TGG + chr8_3:41961767-41961786 None:intergenic 55.0%
ATCCGGCAACTCCACCTTCT+TGG + chr8_3:41961789-41961808 None:intergenic 55.0%
CAGGGACAAATCCCATTGGG+TGG - chr8_3:41961813-41961832 Msa1288790:intron 55.0%
! ATGGGTTCGGTCAGCTGCAA+TGG - chr8_3:41961857-41961876 Msa1288790:intron 55.0%
! TGGGTTCGGTCAGCTGCAAT+GGG - chr8_3:41961858-41961877 Msa1288790:intron 55.0%
TGGAGGGAGAAGCCATGTGT+TGG - chr8_3:41961893-41961912 Msa1288790:intron 55.0%
CAGCGTGACAGCGAGAATAC+TGG - chr8_3:41962130-41962149 Msa1288790:intron 55.0%
GTTCTCCTCACCCTCTTCCT+TGG + chr8_3:41962612-41962631 None:intergenic 55.0%
! GGAGAACCTGACTTGAGTGC+AGG - chr8_3:41962625-41962644 Msa1288790:intron 55.0%
CGACGTGTAGCTGTCATGTC+CGG - chr8_3:41962802-41962821 Msa1288790:intron 55.0%
AATCGGAAGGAACCGGAACG+GGG + chr8_3:41962870-41962889 None:intergenic 55.0%
ACGGCGGAAAGCAAATCGGA+AGG + chr8_3:41962883-41962902 None:intergenic 55.0%
!! TCCGCCGTTTTCTCCTTAGG+TGG - chr8_3:41962895-41962914 Msa1288790:intron 55.0%
CCCACCTAAGGAGAAAACGG+CGG + chr8_3:41962899-41962918 None:intergenic 55.0%
!! CCGCCGTTTTCTCCTTAGGT+GGG - chr8_3:41962896-41962915 Msa1288790:intron 55.0%
CATAAGCGTCACCCGAAGGA+TGG + chr8_3:41962975-41962994 None:intergenic 55.0%
CAGGAGTGGTAGATGTCACG+AGG - chr8_3:41963028-41963047 Msa1288790:intron 55.0%
ATGGAGCTGAAAATGGCCCG+TGG - chr8_3:41963065-41963084 Msa1288790:intron 55.0%
TGGAGCTGAAAATGGCCCGT+GGG - chr8_3:41963066-41963085 Msa1288790:intron 55.0%
CGCAAGGTCGCGGTTTGTAT+GGG + chr8_3:41964047-41964066 None:intergenic 55.0%
ACGCAAGGTCGCGGTTTGTA+TGG + chr8_3:41964048-41964067 None:intergenic 55.0%
TCGAAGGCCGAGCCAAACGA+TGG - chr8_3:41956581-41956600 Msa1288790:exon 60.0%
ACGGTAACCTACGTCGCGTG+AGG + chr8_3:41956935-41956954 None:intergenic 60.0%
CGCGACGTAGGTTACCGTTC+AGG - chr8_3:41956937-41956956 Msa1288790:intron 60.0%
GAGACCGTTCAAATCCCCCC+TGG - chr8_3:41958474-41958493 Msa1288790:intron 60.0%
CACAACCATTGCGAGGTCCC+GGG - chr8_3:41958571-41958590 Msa1288790:intron 60.0%
TCAAACCCGGGACCTCGCAA+TGG + chr8_3:41958579-41958598 None:intergenic 60.0%
CCGGGTTTGAACCCGAGTGA+AGG - chr8_3:41958589-41958608 Msa1288790:intron 60.0%
TAGGCTGGACGCCTTCACTC+GGG + chr8_3:41958603-41958622 None:intergenic 60.0%
TCCCCTCTTCTTGCGGAGTG+TGG + chr8_3:41959032-41959051 None:intergenic 60.0%
CTTCCTGGGGAGTCCTTGTC+TGG + chr8_3:41960440-41960459 None:intergenic 60.0%
TTAGGTGGTTAGGGGGGGGA+GGG + chr8_3:41961093-41961112 None:intergenic 60.0%
GAGCTTAGGTGGTTAGGGGG+GGG + chr8_3:41961097-41961116 None:intergenic 60.0%
CTGGCGCTCTCTCGAAGATC+CGG + chr8_3:41961739-41961758 None:intergenic 60.0%
GGAGGACATGTGGGCCAAGA+AGG - chr8_3:41961772-41961791 Msa1288790:CDS 60.0%
GGACATGTGGGCCAAGAAGG+TGG - chr8_3:41961775-41961794 Msa1288790:CDS 60.0%
GGCCAAGAAGGTGGAGTTGC+CGG - chr8_3:41961784-41961803 Msa1288790:CDS 60.0%
GGTGGCTCGACTATTGCCAG+TGG + chr8_3:41962304-41962323 None:intergenic 60.0%
AGTCGAGCCACCACCTCTAC+AGG - chr8_3:41962312-41962331 Msa1288790:intron 60.0%
CACCACCTCTACAGGAGCTC+CGG - chr8_3:41962320-41962339 Msa1288790:intron 60.0%
ATCCGGAGCTCCTGTAGAGG+TGG + chr8_3:41962325-41962344 None:intergenic 60.0%
AGCATCCGGAGCTCCTGTAG+AGG + chr8_3:41962328-41962347 None:intergenic 60.0%
GACTCGCCAGCAAGCACCTA+TGG + chr8_3:41962378-41962397 None:intergenic 60.0%
! AGAGAGGGCACACCCACCTA+AGG + chr8_3:41962911-41962930 None:intergenic 60.0%
TTAGGTGGGTGTGCCCTCTC+TGG - chr8_3:41962910-41962929 Msa1288790:intron 60.0%
AGAGGGGCTTGTGCCAGAGA+GGG + chr8_3:41962926-41962945 None:intergenic 60.0%
AGGGCTCTTACGCAAGGTCG+CGG + chr8_3:41964057-41964076 None:intergenic 60.0%
GCGTCTTCCTCACGCGACGT+AGG - chr8_3:41956925-41956944 Msa1288790:intron 65.0%
TAGGTGGTTAGGGGGGGGAG+GGG + chr8_3:41961092-41961111 None:intergenic 65.0%
CTTAGGTGGTTAGGGGGGGG+AGG + chr8_3:41961094-41961113 None:intergenic 65.0%
CGGAGCTCCTGTAGAGGTGG+TGG + chr8_3:41962322-41962341 None:intergenic 65.0%
CAGAGGGGCTTGTGCCAGAG+AGG + chr8_3:41962927-41962946 None:intergenic 65.0%
AAGGATGGGCGACGACGACG+AGG + chr8_3:41962960-41962979 None:intergenic 65.0%
CGTCGTCGTCGCCCATCCTT+CGG - chr8_3:41962960-41962979 Msa1288790:intron 65.0%
GTCGTCGTCGCCCATCCTTC+GGG - chr8_3:41962961-41962980 Msa1288790:intron 65.0%
AGGTGGTTAGGGGGGGGAGG+GGG + chr8_3:41961091-41961110 None:intergenic 70.0%
GTGGTTAGGGGGGGGAGGGG+GGG + chr8_3:41961089-41961108 None:intergenic 75.0%
GGTGGTTAGGGGGGGGAGGG+GGG + chr8_3:41961090-41961109 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 41955940 41964737 41955940 ID=Msa1288790;Name=Msa1288790
chr8_3 mRNA 41955940 41964737 41955940 ID=Msa1288790-mRNA-1;Parent=Msa1288790;Name=Msa1288790-mRNA-1;_AED=0.12;_eAED=0.12;_QI=161|0.91|1|1|0.83|0.76|13|645|417
chr8_3 exon 41955940 41956695 41955940 ID=Msa1288790-mRNA-1:exon:11535;Parent=Msa1288790-mRNA-1
chr8_3 exon 41959329 41959453 41959329 ID=Msa1288790-mRNA-1:exon:11534;Parent=Msa1288790-mRNA-1
chr8_3 exon 41960042 41960250 41960042 ID=Msa1288790-mRNA-1:exon:11533;Parent=Msa1288790-mRNA-1
chr8_3 exon 41960326 41960447 41960326 ID=Msa1288790-mRNA-1:exon:11532;Parent=Msa1288790-mRNA-1
chr8_3 exon 41961036 41961130 41961036 ID=Msa1288790-mRNA-1:exon:11531;Parent=Msa1288790-mRNA-1
chr8_3 exon 41961268 41961449 41961268 ID=Msa1288790-mRNA-1:exon:11530;Parent=Msa1288790-mRNA-1
chr8_3 exon 41961528 41961677 41961528 ID=Msa1288790-mRNA-1:exon:11529;Parent=Msa1288790-mRNA-1
chr8_3 exon 41961767 41961822 41961767 ID=Msa1288790-mRNA-1:exon:11528;Parent=Msa1288790-mRNA-1
chr8_3 exon 41962694 41962766 41962694 ID=Msa1288790-mRNA-1:exon:11527;Parent=Msa1288790-mRNA-1
chr8_3 exon 41963218 41963264 41963218 ID=Msa1288790-mRNA-1:exon:11526;Parent=Msa1288790-mRNA-1
chr8_3 exon 41963994 41964111 41963994 ID=Msa1288790-mRNA-1:exon:11525;Parent=Msa1288790-mRNA-1
chr8_3 exon 41964340 41964415 41964340 ID=Msa1288790-mRNA-1:exon:11524;Parent=Msa1288790-mRNA-1
chr8_3 exon 41964687 41964737 41964687 ID=Msa1288790-mRNA-1:exon:11523;Parent=Msa1288790-mRNA-1
chr8_3 five_prime_UTR 41964687 41964737 41964687 ID=Msa1288790-mRNA-1:five_prime_utr;Parent=Msa1288790-mRNA-1
chr8_3 five_prime_UTR 41964340 41964415 41964340 ID=Msa1288790-mRNA-1:five_prime_utr;Parent=Msa1288790-mRNA-1
chr8_3 five_prime_UTR 41964078 41964111 41964078 ID=Msa1288790-mRNA-1:five_prime_utr;Parent=Msa1288790-mRNA-1
chr8_3 CDS 41963994 41964077 41963994 ID=Msa1288790-mRNA-1:cds;Parent=Msa1288790-mRNA-1
chr8_3 CDS 41963218 41963264 41963218 ID=Msa1288790-mRNA-1:cds;Parent=Msa1288790-mRNA-1
chr8_3 CDS 41962694 41962766 41962694 ID=Msa1288790-mRNA-1:cds;Parent=Msa1288790-mRNA-1
chr8_3 CDS 41961767 41961822 41961767 ID=Msa1288790-mRNA-1:cds;Parent=Msa1288790-mRNA-1
chr8_3 CDS 41961528 41961677 41961528 ID=Msa1288790-mRNA-1:cds;Parent=Msa1288790-mRNA-1
chr8_3 CDS 41961268 41961449 41961268 ID=Msa1288790-mRNA-1:cds;Parent=Msa1288790-mRNA-1
chr8_3 CDS 41961036 41961130 41961036 ID=Msa1288790-mRNA-1:cds;Parent=Msa1288790-mRNA-1
chr8_3 CDS 41960326 41960447 41960326 ID=Msa1288790-mRNA-1:cds;Parent=Msa1288790-mRNA-1
chr8_3 CDS 41960042 41960250 41960042 ID=Msa1288790-mRNA-1:cds;Parent=Msa1288790-mRNA-1
chr8_3 CDS 41959329 41959453 41959329 ID=Msa1288790-mRNA-1:cds;Parent=Msa1288790-mRNA-1
chr8_3 CDS 41956585 41956695 41956585 ID=Msa1288790-mRNA-1:cds;Parent=Msa1288790-mRNA-1
chr8_3 three_prime_UTR 41955940 41956584 41955940 ID=Msa1288790-mRNA-1:three_prime_utr;Parent=Msa1288790-mRNA-1
Gene Sequence

>Msa1288790

ATGGATACGAAGAAGGAGAAGCAACAAGGGAATGAAGAATCGTCTACGAAGAAGGAGCGGCATATTGTGACTTGGACTCAAGAGGAGGATGATATACTAAGAGAACAGATCGGAAATCATGGAACTGAAAAATGGTACACTTATTTGAATGCTAATTTCAAGAAAGGTGGATGGACACCAGACGAAGATATCCTCTTATGTGAGGCTCAAAAAATATTTGGAAACAGATGGACTGAAATAGCAAAGGTGGTTTCGGGAAGAACGGATAATGCTGTAAAAAATCGCTTCTCCACACTCCGCAAGAAGAGGGGAAAAAATGACATTGATTCAAATAGCAAGAGGAATATTTCCTATCAAGATTATAATACAGATGCAATGTCAGAATCTGCCATGCCAGTTAAAAAAACGAGGACGGCCCATATCCCCGATGATGCAAAAAAGATCAACTTTGGAGACAGATCACATTTGCGAAATGCAATTTCATTAAATCAGCAGCCAAGAGCACCACTTGCCGAATTAGCTCAACAATCCAATAATGTGAACAATTTTCCAGACAGGCATCATGTTTCCAATGACAAGATCAGCAGTTCAGGCCAAAATAACAAATATGAACTCAAAAAGGATGATCCGAAGATAAGTGCATTGATTCAAATAATTGATTCAGAGAACATGGAAAGAGTATGGAAGCCACTTCTAGAGTTTCTGAACCAAACAGATATCATTGGAGAAAAAATTGCAGTTTTACAGCTTGTAAGTCATACAGTCAAGGAGTTTAAGAGCAGTAATGAGAGAGGCAATTCCTGCTTGAGGCAAATAAAACCAGACAAGGACTCCCCAGGAAGTTCTGAATACAGTACAGGATTAACTCTGCAACATAAGTCAACTTGTAATGGTGATAATTTGGAAAGCTCATTGAATCAGGATACTGGAACTGAAATGCAAGCTACACAACTCGGGGTTAAAAAAGAAGTATGTGAAGGTGTGAAAGAGGTTCTTTCTACTGGAAAAGTGGAACAAGATATGATACCAAACTGTGATGAACAGATAATTGCCTTGCCAAGAATGAACTGTTCCCCTCTTCAAGTGACTCCTATTTTCAGATCCTTGGCTGAAGGAATTCCAACCCCAGAATTTACAGACAGTGAAAAGAGCTTCCTAAGGAAAACACTGGGAGTGGAGTCTCCATCTATCAGTACCAATGTCAACCCATACAAACCGCGACCTTGCGTAAGAGCCCTTCAATATAATCCGTGA
Protein sequence

>Msa1288790

MDTKKEKQQGNEESSTKKERHIVTWTQEEDDILREQIGNHGTEKWYTYLNANFKKGGWTPDEDILLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLRKKRGKNDIDSNSKRNISYQDYNTDAMSESAMPVKKTRTAHIPDDAKKINFGDRSHLRNAISLNQQPRAPLAELAQQSNNVNNFPDRHHVSNDKISSSGQNNKYELKKDDPKISALIQIIDSENMERVWKPLLEFLNQTDIIGEKIAVLQLVSHTVKEFKSSNERGNSCLRQIKPDKDSPGSSEYSTGLTLQHKSTCNGDNLESSLNQDTGTEMQATQLGVKKEVCEGVKEVLSTGKVEQDMIPNCDEQIIALPRMNCSPLQVTPIFRSLAEGIPTPEFTDSEKSFLRKTLGVESPSISTNVNPYKPRPCVRALQYNP*