Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290740 | XP_004517184.2 | 95.833 | 144 | 6 | 0 | 60 | 203 | 16 | 159 | 3.64e-98 | 292 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290740 | sp|Q9ZUI6|AP1G2_ARATH | 93.056 | 144 | 10 | 0 | 60 | 203 | 16 | 159 | 2.22e-92 | 290 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290740 | A0A1S2Z8Y6 | 95.833 | 144 | 6 | 0 | 60 | 203 | 16 | 159 | 1.74e-98 | 292 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1290740 | Msa1326230 | 0.834337 | 3.177295e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290740 | MtrunA17_Chr8g0364891 | 99.306 | 144 | 1 | 0 | 60 | 203 | 16 | 159 | 7.31e-101 | 310 |
| Msa1290740 | MtrunA17_Chr5g0413831 | 95.139 | 144 | 7 | 0 | 60 | 203 | 16 | 159 | 3.63e-96 | 298 |
| Msa1290740 | MtrunA17_Chr2g0320721 | 36.000 | 150 | 91 | 2 | 59 | 203 | 14 | 163 | 2.71e-23 | 97.1 |
| Msa1290740 | MtrunA17_Chr8g0369781 | 27.397 | 146 | 104 | 1 | 60 | 203 | 31 | 176 | 3.67e-14 | 70.5 |
| Msa1290740 | MtrunA17_Chr8g0391151 | 31.200 | 125 | 85 | 1 | 70 | 193 | 32 | 156 | 9.76e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290740 | AT1G60070.1 | 93.056 | 144 | 10 | 0 | 60 | 203 | 16 | 159 | 2.26e-93 | 290 |
| Msa1290740 | AT1G60070.2 | 93.056 | 144 | 10 | 0 | 60 | 203 | 16 | 159 | 5.36e-93 | 290 |
| Msa1290740 | AT1G23900.3 | 89.583 | 144 | 15 | 0 | 60 | 203 | 4 | 147 | 6.91e-91 | 284 |
| Msa1290740 | AT1G23900.1 | 89.583 | 144 | 15 | 0 | 60 | 203 | 16 | 159 | 7.76e-91 | 284 |
| Msa1290740 | AT1G23900.2 | 89.583 | 144 | 15 | 0 | 60 | 203 | 16 | 159 | 7.76e-91 | 284 |
| Msa1290740 | AT1G23935.1 | 70.238 | 168 | 41 | 1 | 36 | 203 | 903 | 1061 | 2.29e-73 | 241 |
| Msa1290740 | AT1G23935.3 | 70.238 | 168 | 41 | 1 | 36 | 203 | 852 | 1010 | 3.35e-73 | 240 |
| Msa1290740 | AT1G23935.2 | 70.238 | 168 | 41 | 1 | 36 | 203 | 853 | 1011 | 3.49e-73 | 240 |
| Msa1290740 | AT5G22770.5 | 36.232 | 138 | 85 | 1 | 59 | 193 | 12 | 149 | 5.22e-23 | 96.7 |
| Msa1290740 | AT5G22770.1 | 36.232 | 138 | 85 | 1 | 59 | 193 | 12 | 149 | 5.22e-23 | 96.7 |
| Msa1290740 | AT5G22770.4 | 36.232 | 138 | 85 | 1 | 59 | 193 | 12 | 149 | 5.22e-23 | 96.7 |
| Msa1290740 | AT5G22770.6 | 36.232 | 138 | 85 | 1 | 59 | 193 | 12 | 149 | 5.22e-23 | 96.7 |
| Msa1290740 | AT5G22770.2 | 36.232 | 138 | 85 | 1 | 59 | 193 | 12 | 149 | 5.22e-23 | 96.7 |
| Msa1290740 | AT5G22770.3 | 36.232 | 138 | 85 | 1 | 59 | 193 | 12 | 149 | 5.22e-23 | 96.7 |
| Msa1290740 | AT5G22780.2 | 36.232 | 138 | 85 | 1 | 59 | 193 | 12 | 149 | 6.03e-23 | 96.3 |
| Msa1290740 | AT5G22780.1 | 36.232 | 138 | 85 | 1 | 59 | 193 | 12 | 149 | 6.03e-23 | 96.3 |
| Msa1290740 | AT1G48760.2 | 31.111 | 135 | 92 | 1 | 70 | 203 | 31 | 165 | 7.41e-15 | 72.8 |
| Msa1290740 | AT1G48760.3 | 31.111 | 135 | 92 | 1 | 70 | 203 | 31 | 165 | 7.41e-15 | 72.8 |
| Msa1290740 | AT1G48760.1 | 31.111 | 135 | 92 | 1 | 70 | 203 | 31 | 165 | 7.41e-15 | 72.8 |
| Msa1290740 | AT1G31730.1 | 27.397 | 146 | 104 | 1 | 60 | 203 | 31 | 176 | 3.19e-12 | 65.1 |
Find 62 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGAATCGGTCACGAAAATT+TGG | 0.165949 | 8_3:+45716123 | None:intergenic |
| CCACTTGCAAGCATTGTTAA+TGG | 0.168730 | 8_3:+45716194 | None:intergenic |
| ACTGGATGTATTTGGATATT+TGG | 0.169111 | 8_3:-45714052 | Msa1290740:three_prime_UTR |
| AGATCCAATTGAATTGAATT+TGG | 0.204138 | 8_3:+45716094 | None:intergenic |
| GGACTTGCTCTTTGTGCTTT+GGG | 0.207114 | 8_3:-45714223 | Msa1290740:CDS |
| TGAGAGGTTGCTGCAATTTC+GGG | 0.218038 | 8_3:-45714155 | Msa1290740:CDS |
| CATAAGATTATTACCACTTT+AGG | 0.218743 | 8_3:-45714084 | Msa1290740:three_prime_UTR |
| TTGAGAGGTTGCTGCAATTT+CGG | 0.235944 | 8_3:-45714156 | Msa1290740:CDS |
| CTTGGCTACCCCACACATTT+TGG | 0.250975 | 8_3:-45714527 | Msa1290740:CDS |
| ACATCTGAACTGGATGTATT+TGG | 0.257292 | 8_3:-45714060 | Msa1290740:three_prime_UTR |
| TGGATACTGTTTCAAAGAAT+TGG | 0.292576 | 8_3:+45714391 | None:intergenic |
| GGGACTTGCTCTTTGTGCTT+TGG | 0.309614 | 8_3:-45714224 | Msa1290740:CDS |
| CTCACCAAATTCAATTCAAT+TGG | 0.321772 | 8_3:-45716098 | Msa1290740:CDS |
| ATGAAAGGACGCAAAATATA+AGG | 0.340047 | 8_3:+45714104 | None:intergenic |
| TAATGGAACGTTCGTTGATT+TGG | 0.363645 | 8_3:+45716211 | None:intergenic |
| GAACATTTGTTCAGCAGAAA+TGG | 0.373763 | 8_3:-45714200 | Msa1290740:CDS |
| TCTCTTCATCCACGCGTTTG+AGG | 0.385851 | 8_3:-45716042 | Msa1290740:intron |
| ACATTAGCTTGGACATATTC+CGG | 0.402551 | 8_3:+45714561 | None:intergenic |
| CACTTTAGGAACATCTGAAC+TGG | 0.413096 | 8_3:-45714070 | Msa1290740:three_prime_UTR |
| AGGTAACCTATTCTCTTCTC+TGG | 0.420513 | 8_3:+45714464 | None:intergenic |
| AATGCTCAGGAGAGGAAAAC+AGG | 0.426681 | 8_3:-45714014 | Msa1290740:three_prime_UTR |
| AATTTCGGGATCCAAATATT+CGG | 0.429776 | 8_3:-45714141 | Msa1290740:CDS |
| GGATTTCCAGAGAAGAGAAT+AGG | 0.466535 | 8_3:-45714470 | Msa1290740:CDS |
| TCATACAAATCAGTATATAG+TGG | 0.470269 | 8_3:-45714245 | Msa1290740:CDS |
| GGATGAAGAGAACGGATTCA+TGG | 0.471592 | 8_3:+45716054 | None:intergenic |
| TGCAGCAACCTCTCAACCTC+TGG | 0.481063 | 8_3:+45714163 | None:intergenic |
| ATTCTCTTCTCTGGAAATCC+AGG | 0.488886 | 8_3:+45714473 | None:intergenic |
| CAGTTCAGATGTTCCTAAAG+TGG | 0.497164 | 8_3:+45714071 | None:intergenic |
| GGGATCCAAATATTCGGAAA+AGG | 0.499221 | 8_3:-45714135 | Msa1290740:CDS |
| TTTCGTCAACAAGCAACATA+AGG | 0.502764 | 8_3:+45714438 | None:intergenic |
| ATGAAAATGACCAACACTAC+AGG | 0.514474 | 8_3:-45714586 | Msa1290740:CDS |
| GAATTTGGTGAGATCCGAAT+CGG | 0.517253 | 8_3:+45716109 | None:intergenic |
| GACTTGCTCTTTGTGCTTTG+GGG | 0.523324 | 8_3:-45714222 | Msa1290740:CDS |
| TCCATTTGACCAAAATGTGT+GGG | 0.528861 | 8_3:+45714518 | None:intergenic |
| CTCAAGTTGATATCATCTCC+TGG | 0.532466 | 8_3:-45714491 | Msa1290740:CDS |
| CTAATGTTCATCCACATGCT+TGG | 0.535489 | 8_3:-45714545 | Msa1290740:CDS |
| TGCTTGCAAAACTGCGGCAG+AGG | 0.537918 | 8_3:-45714657 | Msa1290740:CDS |
| CATGTGGATGAACATTAGCT+TGG | 0.545929 | 8_3:+45714550 | None:intergenic |
| GGCTCGTGACCTTGCACCAG+AGG | 0.547470 | 8_3:-45714179 | Msa1290740:CDS |
| TTCATCAATTGAAGCGCGAA+TGG | 0.547680 | 8_3:+45714604 | None:intergenic |
| AGTGGTAATAATCTTATGAA+AGG | 0.549360 | 8_3:+45714089 | None:intergenic |
| TTATACATCAATGAATGCTC+AGG | 0.551036 | 8_3:-45714027 | Msa1290740:three_prime_UTR |
| TCATAAAATAAAAGTGTCCA+TGG | 0.551280 | 8_3:+45713991 | None:intergenic |
| TATTCCGGTGCCTGTAGTGT+TGG | 0.557877 | 8_3:+45714576 | None:intergenic |
| CAGGAGAGGAAAACAGGCCA+TGG | 0.558049 | 8_3:-45714008 | Msa1290740:three_prime_UTR |
| ACCTCTCAACCTCTGGTGCA+AGG | 0.558056 | 8_3:+45714170 | None:intergenic |
| GAGAAGAGAATAGGTTACCT+TGG | 0.569333 | 8_3:-45714461 | Msa1290740:CDS |
| TTCCATTTGACCAAAATGTG+TGG | 0.570770 | 8_3:+45714517 | None:intergenic |
| CCATTAACAATGCTTGCAAG+TGG | 0.571618 | 8_3:-45716194 | Msa1290740:exon |
| ATGACCAACACTACAGGCAC+CGG | 0.571692 | 8_3:-45714580 | Msa1290740:CDS |
| AAGACAAGAAGTTCTAATGT+TGG | 0.577873 | 8_3:-45714417 | Msa1290740:CDS |
| ACCTTGCACCAGAGGTTGAG+AGG | 0.580430 | 8_3:-45714171 | Msa1290740:CDS |
| CATACAAATCAGTATATAGT+GGG | 0.580791 | 8_3:-45714244 | Msa1290740:CDS |
| CAACAAGCAACATAAGGCCA+AGG | 0.611915 | 8_3:+45714444 | None:intergenic |
| AAGTTGTTGTCATGATGTGT+AGG | 0.613884 | 8_3:+45713955 | None:intergenic |
| GATTACTAACCTCAAACGCG+TGG | 0.623066 | 8_3:+45716033 | None:intergenic |
| CATCAATGAATGCTCAGGAG+AGG | 0.639811 | 8_3:-45714022 | Msa1290740:three_prime_UTR |
| CCATTTGACCAAAATGTGTG+GGG | 0.650020 | 8_3:+45714519 | None:intergenic |
| CAGGAGATGATATCAACTTG+AGG | 0.660137 | 8_3:+45714492 | None:intergenic |
| AAACGCGTGGATGAAGAGAA+CGG | 0.666063 | 8_3:+45716046 | None:intergenic |
| GTGTGGGGTAGCCAAGCATG+TGG | 0.704313 | 8_3:+45714534 | None:intergenic |
| CATACGTGCTTGCAAAACTG+CGG | 0.710584 | 8_3:-45714663 | Msa1290740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAATTAGCTTAATTCT+TGG | + | chr8_3:45714271-45714290 | None:intergenic | 15.0% |
| !! | TTGCAACAAAAAAAAAAAAT+AGG | + | chr8_3:45715420-45715439 | None:intergenic | 15.0% |
| !! | AAATGGAATATAAAAAAATG+AGG | + | chr8_3:45715873-45715892 | None:intergenic | 15.0% |
| !!! | AAATTAATTAGCTTAATTCT+TGG | + | chr8_3:45714271-45714290 | None:intergenic | 15.0% |
| !! | TTGCAACAAAAAAAAAAAAT+AGG | + | chr8_3:45715420-45715439 | None:intergenic | 15.0% |
| !! | AAATGGAATATAAAAAAATG+AGG | + | chr8_3:45715873-45715892 | None:intergenic | 15.0% |
| !!! | AATGAGAATGTATTTTTACA+CGG | - | chr8_3:45714466-45714485 | Msa1290740:CDS | 20.0% |
| !!! | ATGAAATATTGACTTGAAAA+TGG | + | chr8_3:45715839-45715858 | None:intergenic | 20.0% |
| !!! | AATGAGAATGTATTTTTACA+CGG | - | chr8_3:45714466-45714485 | Msa1290740:CDS | 20.0% |
| !!! | ATGAAATATTGACTTGAAAA+TGG | + | chr8_3:45715839-45715858 | None:intergenic | 20.0% |
| ! | AGATCCAATTGAATTGAATT+TGG | + | chr8_3:45714116-45714135 | None:intergenic | 25.0% |
| !!! | TTTTAAAGTAACACTCATAC+AGG | + | chr8_3:45714383-45714402 | None:intergenic | 25.0% |
| !!! | CTTTAAAATTGTTGCATATG+TGG | - | chr8_3:45714395-45714414 | Msa1290740:intron | 25.0% |
| !! | TCTAGAAAACTTAGGTTTTT+AGG | - | chr8_3:45714729-45714748 | Msa1290740:intron | 25.0% |
| ! | TTGGGAATCTTATAAAATGA+TGG | - | chr8_3:45714774-45714793 | Msa1290740:intron | 25.0% |
| ! | TGGGAATCTTATAAAATGAT+GGG | - | chr8_3:45714775-45714794 | Msa1290740:intron | 25.0% |
| ! | AGGATTCCTATAAAAGAATA+GGG | - | chr8_3:45714829-45714848 | Msa1290740:intron | 25.0% |
| !! | CTAAAACCCTATTCTTTTAT+AGG | + | chr8_3:45714838-45714857 | None:intergenic | 25.0% |
| !!! | TAAAAGAATAGGGTTTTAGT+TGG | - | chr8_3:45714839-45714858 | Msa1290740:intron | 25.0% |
| ! | TTGCTCAGAATATTATCAAT+AGG | - | chr8_3:45714885-45714904 | Msa1290740:intron | 25.0% |
| !! | ATGCATATGCCAAATTTTAT+AGG | - | chr8_3:45714911-45714930 | Msa1290740:intron | 25.0% |
| ! | GCTATTCTTCCTATAAAATT+TGG | + | chr8_3:45714923-45714942 | None:intergenic | 25.0% |
| !! | TATTGTTTTCCAATTGCAAA+GGG | + | chr8_3:45715037-45715056 | None:intergenic | 25.0% |
| !! | TTATTGTTTTCCAATTGCAA+AGG | + | chr8_3:45715038-45715057 | None:intergenic | 25.0% |
| ! | ATTGGAAAACAATAACCAAT+AGG | - | chr8_3:45715043-45715062 | Msa1290740:intron | 25.0% |
| !!! | TTTTATCATTGACTTCCTTA+TGG | - | chr8_3:45715096-45715115 | Msa1290740:intron | 25.0% |
| ! | TTCTAGTATAACATGATACA+TGG | - | chr8_3:45715256-45715275 | Msa1290740:intron | 25.0% |
| !! | TCGTTAGAGTATTTGTAAAA+TGG | + | chr8_3:45715890-45715909 | None:intergenic | 25.0% |
| ! | TCATACAAATCAGTATATAG+TGG | - | chr8_3:45715962-45715981 | Msa1290740:intron | 25.0% |
| ! | CATACAAATCAGTATATAGT+GGG | - | chr8_3:45715963-45715982 | Msa1290740:intron | 25.0% |
| ! | AGTGGTAATAATCTTATGAA+AGG | + | chr8_3:45716121-45716140 | None:intergenic | 25.0% |
| ! | CATAAGATTATTACCACTTT+AGG | - | chr8_3:45716123-45716142 | Msa1290740:CDS | 25.0% |
| !!! | TCATAAAATAAAAGTGTCCA+TGG | + | chr8_3:45716219-45716238 | None:intergenic | 25.0% |
| ! | AGATCCAATTGAATTGAATT+TGG | + | chr8_3:45714116-45714135 | None:intergenic | 25.0% |
| !!! | TTTTAAAGTAACACTCATAC+AGG | + | chr8_3:45714383-45714402 | None:intergenic | 25.0% |
| !!! | CTTTAAAATTGTTGCATATG+TGG | - | chr8_3:45714395-45714414 | Msa1290740:intron | 25.0% |
| !! | TCTAGAAAACTTAGGTTTTT+AGG | - | chr8_3:45714729-45714748 | Msa1290740:intron | 25.0% |
| ! | TTGGGAATCTTATAAAATGA+TGG | - | chr8_3:45714774-45714793 | Msa1290740:intron | 25.0% |
| ! | TGGGAATCTTATAAAATGAT+GGG | - | chr8_3:45714775-45714794 | Msa1290740:intron | 25.0% |
| ! | AGGATTCCTATAAAAGAATA+GGG | - | chr8_3:45714829-45714848 | Msa1290740:intron | 25.0% |
| !! | CTAAAACCCTATTCTTTTAT+AGG | + | chr8_3:45714838-45714857 | None:intergenic | 25.0% |
| !!! | TAAAAGAATAGGGTTTTAGT+TGG | - | chr8_3:45714839-45714858 | Msa1290740:intron | 25.0% |
| ! | TTGCTCAGAATATTATCAAT+AGG | - | chr8_3:45714885-45714904 | Msa1290740:intron | 25.0% |
| !! | ATGCATATGCCAAATTTTAT+AGG | - | chr8_3:45714911-45714930 | Msa1290740:intron | 25.0% |
| ! | GCTATTCTTCCTATAAAATT+TGG | + | chr8_3:45714923-45714942 | None:intergenic | 25.0% |
| !! | TATTGTTTTCCAATTGCAAA+GGG | + | chr8_3:45715037-45715056 | None:intergenic | 25.0% |
| !! | TTATTGTTTTCCAATTGCAA+AGG | + | chr8_3:45715038-45715057 | None:intergenic | 25.0% |
| ! | ATTGGAAAACAATAACCAAT+AGG | - | chr8_3:45715043-45715062 | Msa1290740:intron | 25.0% |
| !!! | TTTTATCATTGACTTCCTTA+TGG | - | chr8_3:45715096-45715115 | Msa1290740:intron | 25.0% |
| ! | TTCTAGTATAACATGATACA+TGG | - | chr8_3:45715256-45715275 | Msa1290740:intron | 25.0% |
| !! | TCGTTAGAGTATTTGTAAAA+TGG | + | chr8_3:45715890-45715909 | None:intergenic | 25.0% |
| ! | TCATACAAATCAGTATATAG+TGG | - | chr8_3:45715962-45715981 | Msa1290740:intron | 25.0% |
| ! | CATACAAATCAGTATATAGT+GGG | - | chr8_3:45715963-45715982 | Msa1290740:intron | 25.0% |
| ! | AGTGGTAATAATCTTATGAA+AGG | + | chr8_3:45716121-45716140 | None:intergenic | 25.0% |
| ! | CATAAGATTATTACCACTTT+AGG | - | chr8_3:45716123-45716142 | Msa1290740:CDS | 25.0% |
| !!! | TCATAAAATAAAAGTGTCCA+TGG | + | chr8_3:45716219-45716238 | None:intergenic | 25.0% |
| CTCACCAAATTCAATTCAAT+TGG | - | chr8_3:45714109-45714128 | Msa1290740:three_prime_UTR | 30.0% | |
| AGCAAATTCTCAGTAAACAA+TGG | + | chr8_3:45714210-45714229 | None:intergenic | 30.0% | |
| TAATTCTTGGCTAATTGCAT+TGG | + | chr8_3:45714258-45714277 | None:intergenic | 30.0% | |
| CACATGTAGATACATTCATT+CGG | + | chr8_3:45714544-45714563 | None:intergenic | 30.0% | |
| !!! | ACGTTTTTAGTCTAAAGTGT+CGG | - | chr8_3:45714582-45714601 | Msa1290740:CDS | 30.0% |
| ! | TATTGCTCTCTAGAAAACTT+AGG | - | chr8_3:45714721-45714740 | Msa1290740:intron | 30.0% |
| !!! | AACTTAGGTTTTTAGGATTG+AGG | - | chr8_3:45714736-45714755 | Msa1290740:intron | 30.0% |
| !! | AGGAGAACTTGTTAATGTTT+GGG | - | chr8_3:45714756-45714775 | Msa1290740:intron | 30.0% |
| CAGGATTCCTATAAAAGAAT+AGG | - | chr8_3:45714828-45714847 | Msa1290740:intron | 30.0% | |
| AGGAAGAATAGCTAGAAATA+TGG | - | chr8_3:45714931-45714950 | Msa1290740:intron | 30.0% | |
| GGAAGAATAGCTAGAAATAT+GGG | - | chr8_3:45714932-45714951 | Msa1290740:intron | 30.0% | |
| GAAGAATAGCTAGAAATATG+GGG | - | chr8_3:45714933-45714952 | Msa1290740:intron | 30.0% | |
| CTCTACAGATTTCTTAGATT+GGG | - | chr8_3:45715072-45715091 | Msa1290740:intron | 30.0% | |
| TCTACAGATTTCTTAGATTG+GGG | - | chr8_3:45715073-45715092 | Msa1290740:intron | 30.0% | |
| CAAATCTCTATATACCATCA+AGG | + | chr8_3:45715153-45715172 | None:intergenic | 30.0% | |
| TAATAGAAAACGAGTACAAG+AGG | + | chr8_3:45715181-45715200 | None:intergenic | 30.0% | |
| AAAGAAAAGTTATCCCAGAA+GGG | + | chr8_3:45715236-45715255 | None:intergenic | 30.0% | |
| AAAAGAAAAGTTATCCCAGA+AGG | + | chr8_3:45715237-45715256 | None:intergenic | 30.0% | |
| AAGGAAAATAGAGCTTGATA+CGG | + | chr8_3:45715319-45715338 | None:intergenic | 30.0% | |
| CAATCACAAGATATGTAGAA+AGG | + | chr8_3:45715338-45715357 | None:intergenic | 30.0% | |
| ! | AAGACAAGAAGTTCTAATGT+TGG | - | chr8_3:45715790-45715809 | Msa1290740:intron | 30.0% |
| TGGATACTGTTTCAAAGAAT+TGG | + | chr8_3:45715819-45715838 | None:intergenic | 30.0% | |
| ACTCTAACGAACAATATCAA+AGG | - | chr8_3:45715900-45715919 | Msa1290740:intron | 30.0% | |
| TAACGAACAATATCAAAGGT+GGG | - | chr8_3:45715904-45715923 | Msa1290740:intron | 30.0% | |
| !! | AGATCTCTGGGATTTAATTA+AGG | + | chr8_3:45715939-45715958 | None:intergenic | 30.0% |
| TTTGTATGATTGAGATCTCT+GGG | + | chr8_3:45715951-45715970 | None:intergenic | 30.0% | |
| ATTTGTATGATTGAGATCTC+TGG | + | chr8_3:45715952-45715971 | None:intergenic | 30.0% | |
| AATTTCGGGATCCAAATATT+CGG | - | chr8_3:45716066-45716085 | Msa1290740:CDS | 30.0% | |
| ATGAAAGGACGCAAAATATA+AGG | + | chr8_3:45716106-45716125 | None:intergenic | 30.0% | |
| ACTGGATGTATTTGGATATT+TGG | - | chr8_3:45716155-45716174 | Msa1290740:CDS | 30.0% | |
| TTATACATCAATGAATGCTC+AGG | - | chr8_3:45716180-45716199 | Msa1290740:CDS | 30.0% | |
| CTCACCAAATTCAATTCAAT+TGG | - | chr8_3:45714109-45714128 | Msa1290740:three_prime_UTR | 30.0% | |
| AGCAAATTCTCAGTAAACAA+TGG | + | chr8_3:45714210-45714229 | None:intergenic | 30.0% | |
| TAATTCTTGGCTAATTGCAT+TGG | + | chr8_3:45714258-45714277 | None:intergenic | 30.0% | |
| CACATGTAGATACATTCATT+CGG | + | chr8_3:45714544-45714563 | None:intergenic | 30.0% | |
| !!! | ACGTTTTTAGTCTAAAGTGT+CGG | - | chr8_3:45714582-45714601 | Msa1290740:CDS | 30.0% |
| ! | TATTGCTCTCTAGAAAACTT+AGG | - | chr8_3:45714721-45714740 | Msa1290740:intron | 30.0% |
| !!! | AACTTAGGTTTTTAGGATTG+AGG | - | chr8_3:45714736-45714755 | Msa1290740:intron | 30.0% |
| !! | AGGAGAACTTGTTAATGTTT+GGG | - | chr8_3:45714756-45714775 | Msa1290740:intron | 30.0% |
| CAGGATTCCTATAAAAGAAT+AGG | - | chr8_3:45714828-45714847 | Msa1290740:intron | 30.0% | |
| AGGAAGAATAGCTAGAAATA+TGG | - | chr8_3:45714931-45714950 | Msa1290740:intron | 30.0% | |
| GGAAGAATAGCTAGAAATAT+GGG | - | chr8_3:45714932-45714951 | Msa1290740:intron | 30.0% | |
| GAAGAATAGCTAGAAATATG+GGG | - | chr8_3:45714933-45714952 | Msa1290740:intron | 30.0% | |
| CTCTACAGATTTCTTAGATT+GGG | - | chr8_3:45715072-45715091 | Msa1290740:intron | 30.0% | |
| TCTACAGATTTCTTAGATTG+GGG | - | chr8_3:45715073-45715092 | Msa1290740:intron | 30.0% | |
| CAAATCTCTATATACCATCA+AGG | + | chr8_3:45715153-45715172 | None:intergenic | 30.0% | |
| TAATAGAAAACGAGTACAAG+AGG | + | chr8_3:45715181-45715200 | None:intergenic | 30.0% | |
| AAAGAAAAGTTATCCCAGAA+GGG | + | chr8_3:45715236-45715255 | None:intergenic | 30.0% | |
| AAAAGAAAAGTTATCCCAGA+AGG | + | chr8_3:45715237-45715256 | None:intergenic | 30.0% | |
| AAGGAAAATAGAGCTTGATA+CGG | + | chr8_3:45715319-45715338 | None:intergenic | 30.0% | |
| CAATCACAAGATATGTAGAA+AGG | + | chr8_3:45715338-45715357 | None:intergenic | 30.0% | |
| ! | AAGACAAGAAGTTCTAATGT+TGG | - | chr8_3:45715790-45715809 | Msa1290740:intron | 30.0% |
| TGGATACTGTTTCAAAGAAT+TGG | + | chr8_3:45715819-45715838 | None:intergenic | 30.0% | |
| ACTCTAACGAACAATATCAA+AGG | - | chr8_3:45715900-45715919 | Msa1290740:intron | 30.0% | |
| TAACGAACAATATCAAAGGT+GGG | - | chr8_3:45715904-45715923 | Msa1290740:intron | 30.0% | |
| !! | AGATCTCTGGGATTTAATTA+AGG | + | chr8_3:45715939-45715958 | None:intergenic | 30.0% |
| TTTGTATGATTGAGATCTCT+GGG | + | chr8_3:45715951-45715970 | None:intergenic | 30.0% | |
| ATTTGTATGATTGAGATCTC+TGG | + | chr8_3:45715952-45715971 | None:intergenic | 30.0% | |
| AATTTCGGGATCCAAATATT+CGG | - | chr8_3:45716066-45716085 | Msa1290740:CDS | 30.0% | |
| ATGAAAGGACGCAAAATATA+AGG | + | chr8_3:45716106-45716125 | None:intergenic | 30.0% | |
| ACTGGATGTATTTGGATATT+TGG | - | chr8_3:45716155-45716174 | Msa1290740:CDS | 30.0% | |
| TTATACATCAATGAATGCTC+AGG | - | chr8_3:45716180-45716199 | Msa1290740:CDS | 30.0% | |
| ! | TAATGGAACGTTCGTTGATT+TGG | + | chr8_3:45713999-45714018 | None:intergenic | 35.0% |
| ! | AATGTGAGTTGTTACTTGAG+AGG | - | chr8_3:45714693-45714712 | Msa1290740:intron | 35.0% |
| ! | ATGTGAGTTGTTACTTGAGA+GGG | - | chr8_3:45714694-45714713 | Msa1290740:intron | 35.0% |
| !! | GAGGAGAACTTGTTAATGTT+TGG | - | chr8_3:45714755-45714774 | Msa1290740:intron | 35.0% |
| TATAGGAATCCTGAACATCA+TGG | + | chr8_3:45714821-45714840 | None:intergenic | 35.0% | |
| !!! | AGAATAGGGTTTTAGTTGGA+TGG | - | chr8_3:45714843-45714862 | Msa1290740:intron | 35.0% |
| AGAAATATGGGGCAACAATT+TGG | - | chr8_3:45714944-45714963 | Msa1290740:intron | 35.0% | |
| !! | CAACAATTTGGAGTTTTGCA+AGG | - | chr8_3:45714956-45714975 | Msa1290740:intron | 35.0% |
| !! | ATTTGGAGTTTTGCAAGGTT+TGG | - | chr8_3:45714961-45714980 | Msa1290740:intron | 35.0% |
| !! | TTTGGAGTTTTGCAAGGTTT+GGG | - | chr8_3:45714962-45714981 | Msa1290740:intron | 35.0% |
| CCAATCTAAGAAATCTGTAG+AGG | + | chr8_3:45715074-45715093 | None:intergenic | 35.0% | |
| CCTCTACAGATTTCTTAGAT+TGG | - | chr8_3:45715071-45715090 | Msa1290740:intron | 35.0% | |
| ! | GTTTCATTGGTTATCCTTGA+TGG | - | chr8_3:45715136-45715155 | Msa1290740:intron | 35.0% |
| ! | TTGTTCATATCCCCTCTTTT+AGG | - | chr8_3:45715508-45715527 | Msa1290740:intron | 35.0% |
| ! | TGTTCATATCCCCTCTTTTA+GGG | - | chr8_3:45715509-45715528 | Msa1290740:intron | 35.0% |
| ATGAAAATGACCAACACTAC+AGG | - | chr8_3:45715621-45715640 | Msa1290740:intron | 35.0% | |
| ! | ACATTAGCTTGGACATATTC+CGG | + | chr8_3:45715649-45715668 | None:intergenic | 35.0% |
| TCCATTTGACCAAAATGTGT+GGG | + | chr8_3:45715692-45715711 | None:intergenic | 35.0% | |
| TTCCATTTGACCAAAATGTG+TGG | + | chr8_3:45715693-45715712 | None:intergenic | 35.0% | |
| TTTCGTCAACAAGCAACATA+AGG | + | chr8_3:45715772-45715791 | None:intergenic | 35.0% | |
| CTAACGAACAATATCAAAGG+TGG | - | chr8_3:45715903-45715922 | Msa1290740:intron | 35.0% | |
| !! | ACAATATCAAAGGTGGGTTA+TGG | - | chr8_3:45715910-45715929 | Msa1290740:intron | 35.0% |
| GAACATTTGTTCAGCAGAAA+TGG | - | chr8_3:45716007-45716026 | Msa1290740:intron | 35.0% | |
| ! | AGTCACCTTTTCCGAATATT+TGG | + | chr8_3:45716080-45716099 | None:intergenic | 35.0% |
| ACATCTGAACTGGATGTATT+TGG | - | chr8_3:45716147-45716166 | Msa1290740:CDS | 35.0% | |
| AAGTTGTTGTCATGATGTGT+AGG | + | chr8_3:45716255-45716274 | None:intergenic | 35.0% | |
| ! | TAATGGAACGTTCGTTGATT+TGG | + | chr8_3:45713999-45714018 | None:intergenic | 35.0% |
| ! | AATGTGAGTTGTTACTTGAG+AGG | - | chr8_3:45714693-45714712 | Msa1290740:intron | 35.0% |
| ! | ATGTGAGTTGTTACTTGAGA+GGG | - | chr8_3:45714694-45714713 | Msa1290740:intron | 35.0% |
| !! | GAGGAGAACTTGTTAATGTT+TGG | - | chr8_3:45714755-45714774 | Msa1290740:intron | 35.0% |
| TATAGGAATCCTGAACATCA+TGG | + | chr8_3:45714821-45714840 | None:intergenic | 35.0% | |
| !!! | AGAATAGGGTTTTAGTTGGA+TGG | - | chr8_3:45714843-45714862 | Msa1290740:intron | 35.0% |
| AGAAATATGGGGCAACAATT+TGG | - | chr8_3:45714944-45714963 | Msa1290740:intron | 35.0% | |
| !! | CAACAATTTGGAGTTTTGCA+AGG | - | chr8_3:45714956-45714975 | Msa1290740:intron | 35.0% |
| !! | ATTTGGAGTTTTGCAAGGTT+TGG | - | chr8_3:45714961-45714980 | Msa1290740:intron | 35.0% |
| !! | TTTGGAGTTTTGCAAGGTTT+GGG | - | chr8_3:45714962-45714981 | Msa1290740:intron | 35.0% |
| CCAATCTAAGAAATCTGTAG+AGG | + | chr8_3:45715074-45715093 | None:intergenic | 35.0% | |
| CCTCTACAGATTTCTTAGAT+TGG | - | chr8_3:45715071-45715090 | Msa1290740:intron | 35.0% | |
| ! | GTTTCATTGGTTATCCTTGA+TGG | - | chr8_3:45715136-45715155 | Msa1290740:intron | 35.0% |
| ! | TTGTTCATATCCCCTCTTTT+AGG | - | chr8_3:45715508-45715527 | Msa1290740:intron | 35.0% |
| ! | TGTTCATATCCCCTCTTTTA+GGG | - | chr8_3:45715509-45715528 | Msa1290740:intron | 35.0% |
| ATGAAAATGACCAACACTAC+AGG | - | chr8_3:45715621-45715640 | Msa1290740:intron | 35.0% | |
| ! | ACATTAGCTTGGACATATTC+CGG | + | chr8_3:45715649-45715668 | None:intergenic | 35.0% |
| TCCATTTGACCAAAATGTGT+GGG | + | chr8_3:45715692-45715711 | None:intergenic | 35.0% | |
| TTCCATTTGACCAAAATGTG+TGG | + | chr8_3:45715693-45715712 | None:intergenic | 35.0% | |
| TTTCGTCAACAAGCAACATA+AGG | + | chr8_3:45715772-45715791 | None:intergenic | 35.0% | |
| CTAACGAACAATATCAAAGG+TGG | - | chr8_3:45715903-45715922 | Msa1290740:intron | 35.0% | |
| !! | ACAATATCAAAGGTGGGTTA+TGG | - | chr8_3:45715910-45715929 | Msa1290740:intron | 35.0% |
| GAACATTTGTTCAGCAGAAA+TGG | - | chr8_3:45716007-45716026 | Msa1290740:intron | 35.0% | |
| ! | AGTCACCTTTTCCGAATATT+TGG | + | chr8_3:45716080-45716099 | None:intergenic | 35.0% |
| ACATCTGAACTGGATGTATT+TGG | - | chr8_3:45716147-45716166 | Msa1290740:CDS | 35.0% | |
| AAGTTGTTGTCATGATGTGT+AGG | + | chr8_3:45716255-45716274 | None:intergenic | 35.0% | |
| ! | CCACTTGCAAGCATTGTTAA+TGG | + | chr8_3:45714016-45714035 | None:intergenic | 40.0% |
| CCATTAACAATGCTTGCAAG+TGG | - | chr8_3:45714013-45714032 | Msa1290740:three_prime_UTR | 40.0% | |
| ! | CCAAATTTTCGTGACCGATT+CGG | - | chr8_3:45714084-45714103 | Msa1290740:three_prime_UTR | 40.0% |
| ! | GAATTTGGTGAGATCCGAAT+CGG | + | chr8_3:45714101-45714120 | None:intergenic | 40.0% |
| ! | ACATGTGTAAGTGTCGTTCA+TGG | - | chr8_3:45714557-45714576 | Msa1290740:CDS | 40.0% |
| ! | TGGGTGCAGAACAAGTTTTT+AGG | - | chr8_3:45714981-45715000 | Msa1290740:intron | 40.0% |
| CCAATGAAACAGATCATACG+CGG | + | chr8_3:45715126-45715145 | None:intergenic | 40.0% | |
| GGAGAAGAGAATCTCATTCT+CGG | + | chr8_3:45715211-45715230 | None:intergenic | 40.0% | |
| AAAAGTTATCCCAGAAGGGT+TGG | + | chr8_3:45715232-45715251 | None:intergenic | 40.0% | |
| AAGAGGGGATATGAACAAGA+TGG | + | chr8_3:45715506-45715525 | None:intergenic | 40.0% | |
| GAATCATGTCCCTAAAAGAG+GGG | + | chr8_3:45715521-45715540 | None:intergenic | 40.0% | |
| CGAATCATGTCCCTAAAAGA+GGG | + | chr8_3:45715522-45715541 | None:intergenic | 40.0% | |
| !! | CCTCTTTTAGGGACATGATT+CGG | - | chr8_3:45715520-45715539 | Msa1290740:intron | 40.0% |
| TTCATCAATTGAAGCGCGAA+TGG | + | chr8_3:45715606-45715625 | None:intergenic | 40.0% | |
| CATGTGGATGAACATTAGCT+TGG | + | chr8_3:45715660-45715679 | None:intergenic | 40.0% | |
| CTAATGTTCATCCACATGCT+TGG | - | chr8_3:45715662-45715681 | Msa1290740:intron | 40.0% | |
| CCATTTGACCAAAATGTGTG+GGG | + | chr8_3:45715691-45715710 | None:intergenic | 40.0% | |
| CAGGAGATGATATCAACTTG+AGG | + | chr8_3:45715718-45715737 | None:intergenic | 40.0% | |
| !! | CTCAAGTTGATATCATCTCC+TGG | - | chr8_3:45715716-45715735 | Msa1290740:intron | 40.0% |
| ! | ATTCTCTTCTCTGGAAATCC+AGG | + | chr8_3:45715737-45715756 | None:intergenic | 40.0% |
| GGATTTCCAGAGAAGAGAAT+AGG | - | chr8_3:45715737-45715756 | Msa1290740:intron | 40.0% | |
| AGGTAACCTATTCTCTTCTC+TGG | + | chr8_3:45715746-45715765 | None:intergenic | 40.0% | |
| GAGAAGAGAATAGGTTACCT+TGG | - | chr8_3:45715746-45715765 | Msa1290740:intron | 40.0% | |
| TTGAGAGGTTGCTGCAATTT+CGG | - | chr8_3:45716051-45716070 | Msa1290740:CDS | 40.0% | |
| GGGATCCAAATATTCGGAAA+AGG | - | chr8_3:45716072-45716091 | Msa1290740:CDS | 40.0% | |
| CAGTTCAGATGTTCCTAAAG+TGG | + | chr8_3:45716139-45716158 | None:intergenic | 40.0% | |
| ! | CACTTTAGGAACATCTGAAC+TGG | - | chr8_3:45716137-45716156 | Msa1290740:CDS | 40.0% |
| ! | CCACTTGCAAGCATTGTTAA+TGG | + | chr8_3:45714016-45714035 | None:intergenic | 40.0% |
| CCATTAACAATGCTTGCAAG+TGG | - | chr8_3:45714013-45714032 | Msa1290740:three_prime_UTR | 40.0% | |
| ! | CCAAATTTTCGTGACCGATT+CGG | - | chr8_3:45714084-45714103 | Msa1290740:three_prime_UTR | 40.0% |
| ! | GAATTTGGTGAGATCCGAAT+CGG | + | chr8_3:45714101-45714120 | None:intergenic | 40.0% |
| ! | ACATGTGTAAGTGTCGTTCA+TGG | - | chr8_3:45714557-45714576 | Msa1290740:CDS | 40.0% |
| ! | TGGGTGCAGAACAAGTTTTT+AGG | - | chr8_3:45714981-45715000 | Msa1290740:intron | 40.0% |
| CCAATGAAACAGATCATACG+CGG | + | chr8_3:45715126-45715145 | None:intergenic | 40.0% | |
| GGAGAAGAGAATCTCATTCT+CGG | + | chr8_3:45715211-45715230 | None:intergenic | 40.0% | |
| AAAAGTTATCCCAGAAGGGT+TGG | + | chr8_3:45715232-45715251 | None:intergenic | 40.0% | |
| AAGAGGGGATATGAACAAGA+TGG | + | chr8_3:45715506-45715525 | None:intergenic | 40.0% | |
| GAATCATGTCCCTAAAAGAG+GGG | + | chr8_3:45715521-45715540 | None:intergenic | 40.0% | |
| CGAATCATGTCCCTAAAAGA+GGG | + | chr8_3:45715522-45715541 | None:intergenic | 40.0% | |
| !! | CCTCTTTTAGGGACATGATT+CGG | - | chr8_3:45715520-45715539 | Msa1290740:intron | 40.0% |
| TTCATCAATTGAAGCGCGAA+TGG | + | chr8_3:45715606-45715625 | None:intergenic | 40.0% | |
| CATGTGGATGAACATTAGCT+TGG | + | chr8_3:45715660-45715679 | None:intergenic | 40.0% | |
| CTAATGTTCATCCACATGCT+TGG | - | chr8_3:45715662-45715681 | Msa1290740:intron | 40.0% | |
| CCATTTGACCAAAATGTGTG+GGG | + | chr8_3:45715691-45715710 | None:intergenic | 40.0% | |
| CAGGAGATGATATCAACTTG+AGG | + | chr8_3:45715718-45715737 | None:intergenic | 40.0% | |
| !! | CTCAAGTTGATATCATCTCC+TGG | - | chr8_3:45715716-45715735 | Msa1290740:intron | 40.0% |
| ! | ATTCTCTTCTCTGGAAATCC+AGG | + | chr8_3:45715737-45715756 | None:intergenic | 40.0% |
| GGATTTCCAGAGAAGAGAAT+AGG | - | chr8_3:45715737-45715756 | Msa1290740:intron | 40.0% | |
| AGGTAACCTATTCTCTTCTC+TGG | + | chr8_3:45715746-45715765 | None:intergenic | 40.0% | |
| GAGAAGAGAATAGGTTACCT+TGG | - | chr8_3:45715746-45715765 | Msa1290740:intron | 40.0% | |
| TTGAGAGGTTGCTGCAATTT+CGG | - | chr8_3:45716051-45716070 | Msa1290740:CDS | 40.0% | |
| GGGATCCAAATATTCGGAAA+AGG | - | chr8_3:45716072-45716091 | Msa1290740:CDS | 40.0% | |
| CAGTTCAGATGTTCCTAAAG+TGG | + | chr8_3:45716139-45716158 | None:intergenic | 40.0% | |
| ! | CACTTTAGGAACATCTGAAC+TGG | - | chr8_3:45716137-45716156 | Msa1290740:CDS | 40.0% |
| CCGAATCGGTCACGAAAATT+TGG | + | chr8_3:45714087-45714106 | None:intergenic | 45.0% | |
| ! | GGATGAAGAGAACGGATTCA+TGG | + | chr8_3:45714156-45714175 | None:intergenic | 45.0% |
| AAACGCGTGGATGAAGAGAA+CGG | + | chr8_3:45714164-45714183 | None:intergenic | 45.0% | |
| GATTACTAACCTCAAACGCG+TGG | + | chr8_3:45714177-45714196 | None:intergenic | 45.0% | |
| ! | CAATGTCTAAGTGTCGTGTC+TGG | + | chr8_3:45714495-45714514 | None:intergenic | 45.0% |
| CAGACACGACACTTAGACAT+TGG | - | chr8_3:45714493-45714512 | Msa1290740:CDS | 45.0% | |
| ATCCATAAGCGTACTTGTGG+AGG | + | chr8_3:45714625-45714644 | None:intergenic | 45.0% | |
| GTGATCCATAAGCGTACTTG+TGG | + | chr8_3:45714628-45714647 | None:intergenic | 45.0% | |
| AAGCAGTGACCATGATGTTC+AGG | - | chr8_3:45714809-45714828 | Msa1290740:intron | 45.0% | |
| !!! | GGGTTTTAGTTGGATGGCAT+TGG | - | chr8_3:45714849-45714868 | Msa1290740:intron | 45.0% |
| CAGCACATTGGCACAAAACA+GGG | + | chr8_3:45715007-45715026 | None:intergenic | 45.0% | |
| ACAGCACATTGGCACAAAAC+AGG | + | chr8_3:45715008-45715027 | None:intergenic | 45.0% | |
| TTTCCAATTGCAAAGGGCCA+AGG | + | chr8_3:45715031-45715050 | None:intergenic | 45.0% | |
| ! | TCTGTAGAGGCATAGCCTAT+TGG | + | chr8_3:45715061-45715080 | None:intergenic | 45.0% |
| ATCATACGCGGAACACCATA+AGG | + | chr8_3:45715114-45715133 | None:intergenic | 45.0% | |
| CCGCGTATGATCTGTTTCAT+TGG | - | chr8_3:45715123-45715142 | Msa1290740:intron | 45.0% | |
| ATTCTCTTCTCCAACCCTTC+TGG | - | chr8_3:45715219-45715238 | Msa1290740:intron | 45.0% | |
| TTCTCTTCTCCAACCCTTCT+GGG | - | chr8_3:45715220-45715239 | Msa1290740:intron | 45.0% | |
| GCTTGATACGGTGACAGTAT+CGG | + | chr8_3:45715307-45715326 | None:intergenic | 45.0% | |
| CCGAATCATGTCCCTAAAAG+AGG | + | chr8_3:45715523-45715542 | None:intergenic | 45.0% | |
| CATACGTGCTTGCAAAACTG+CGG | - | chr8_3:45715544-45715563 | Msa1290740:intron | 45.0% | |
| !! | CCCCACACATTTTGGTCAAA+TGG | - | chr8_3:45715688-45715707 | Msa1290740:intron | 45.0% |
| CAACAAGCAACATAAGGCCA+AGG | + | chr8_3:45715766-45715785 | None:intergenic | 45.0% | |
| ! | GGACTTGCTCTTTGTGCTTT+GGG | - | chr8_3:45715984-45716003 | Msa1290740:intron | 45.0% |
| ! | GACTTGCTCTTTGTGCTTTG+GGG | - | chr8_3:45715985-45716004 | Msa1290740:intron | 45.0% |
| TGAGAGGTTGCTGCAATTTC+GGG | - | chr8_3:45716052-45716071 | Msa1290740:CDS | 45.0% | |
| CATCAATGAATGCTCAGGAG+AGG | - | chr8_3:45716185-45716204 | Msa1290740:CDS | 45.0% | |
| AATGCTCAGGAGAGGAAAAC+AGG | - | chr8_3:45716193-45716212 | Msa1290740:exon | 45.0% | |
| CCGAATCGGTCACGAAAATT+TGG | + | chr8_3:45714087-45714106 | None:intergenic | 45.0% | |
| ! | GGATGAAGAGAACGGATTCA+TGG | + | chr8_3:45714156-45714175 | None:intergenic | 45.0% |
| AAACGCGTGGATGAAGAGAA+CGG | + | chr8_3:45714164-45714183 | None:intergenic | 45.0% | |
| GATTACTAACCTCAAACGCG+TGG | + | chr8_3:45714177-45714196 | None:intergenic | 45.0% | |
| ! | CAATGTCTAAGTGTCGTGTC+TGG | + | chr8_3:45714495-45714514 | None:intergenic | 45.0% |
| CAGACACGACACTTAGACAT+TGG | - | chr8_3:45714493-45714512 | Msa1290740:CDS | 45.0% | |
| ATCCATAAGCGTACTTGTGG+AGG | + | chr8_3:45714625-45714644 | None:intergenic | 45.0% | |
| GTGATCCATAAGCGTACTTG+TGG | + | chr8_3:45714628-45714647 | None:intergenic | 45.0% | |
| AAGCAGTGACCATGATGTTC+AGG | - | chr8_3:45714809-45714828 | Msa1290740:intron | 45.0% | |
| !!! | GGGTTTTAGTTGGATGGCAT+TGG | - | chr8_3:45714849-45714868 | Msa1290740:intron | 45.0% |
| CAGCACATTGGCACAAAACA+GGG | + | chr8_3:45715007-45715026 | None:intergenic | 45.0% | |
| ACAGCACATTGGCACAAAAC+AGG | + | chr8_3:45715008-45715027 | None:intergenic | 45.0% | |
| TTTCCAATTGCAAAGGGCCA+AGG | + | chr8_3:45715031-45715050 | None:intergenic | 45.0% | |
| ! | TCTGTAGAGGCATAGCCTAT+TGG | + | chr8_3:45715061-45715080 | None:intergenic | 45.0% |
| ATCATACGCGGAACACCATA+AGG | + | chr8_3:45715114-45715133 | None:intergenic | 45.0% | |
| CCGCGTATGATCTGTTTCAT+TGG | - | chr8_3:45715123-45715142 | Msa1290740:intron | 45.0% | |
| ATTCTCTTCTCCAACCCTTC+TGG | - | chr8_3:45715219-45715238 | Msa1290740:intron | 45.0% | |
| TTCTCTTCTCCAACCCTTCT+GGG | - | chr8_3:45715220-45715239 | Msa1290740:intron | 45.0% | |
| GCTTGATACGGTGACAGTAT+CGG | + | chr8_3:45715307-45715326 | None:intergenic | 45.0% | |
| CCGAATCATGTCCCTAAAAG+AGG | + | chr8_3:45715523-45715542 | None:intergenic | 45.0% | |
| CATACGTGCTTGCAAAACTG+CGG | - | chr8_3:45715544-45715563 | Msa1290740:intron | 45.0% | |
| !! | CCCCACACATTTTGGTCAAA+TGG | - | chr8_3:45715688-45715707 | Msa1290740:intron | 45.0% |
| CAACAAGCAACATAAGGCCA+AGG | + | chr8_3:45715766-45715785 | None:intergenic | 45.0% | |
| ! | GGACTTGCTCTTTGTGCTTT+GGG | - | chr8_3:45715984-45716003 | Msa1290740:intron | 45.0% |
| ! | GACTTGCTCTTTGTGCTTTG+GGG | - | chr8_3:45715985-45716004 | Msa1290740:intron | 45.0% |
| TGAGAGGTTGCTGCAATTTC+GGG | - | chr8_3:45716052-45716071 | Msa1290740:CDS | 45.0% | |
| CATCAATGAATGCTCAGGAG+AGG | - | chr8_3:45716185-45716204 | Msa1290740:CDS | 45.0% | |
| AATGCTCAGGAGAGGAAAAC+AGG | - | chr8_3:45716193-45716212 | Msa1290740:exon | 45.0% | |
| !! | AATAATAATAATAACAATAA+TGG | + | chr8_3:45714306-45714325 | None:intergenic | 5.0% |
| !! | AATAATAATAATAACAATAA+TGG | + | chr8_3:45714306-45714325 | None:intergenic | 5.0% |
| TCTCTTCATCCACGCGTTTG+AGG | - | chr8_3:45714165-45714184 | Msa1290740:CDS | 50.0% | |
| TGCCTCCACAAGTACGCTTA+TGG | - | chr8_3:45714620-45714639 | Msa1290740:CDS | 50.0% | |
| TTGTGCCAATGTGCTGTCCT+TGG | - | chr8_3:45715011-45715030 | Msa1290740:intron | 50.0% | |
| TGTCCTTGGCCCTTTGCAAT+TGG | - | chr8_3:45715025-45715044 | Msa1290740:intron | 50.0% | |
| ! | CGCAGTTTTGCAAGCACGTA+TGG | + | chr8_3:45715546-45715565 | None:intergenic | 50.0% |
| ATGACCAACACTACAGGCAC+CGG | - | chr8_3:45715627-45715646 | Msa1290740:intron | 50.0% | |
| TATTCCGGTGCCTGTAGTGT+TGG | + | chr8_3:45715634-45715653 | None:intergenic | 50.0% | |
| ! | CTTGGCTACCCCACACATTT+TGG | - | chr8_3:45715680-45715699 | Msa1290740:intron | 50.0% |
| ! | GGGACTTGCTCTTTGTGCTT+TGG | - | chr8_3:45715983-45716002 | Msa1290740:intron | 50.0% |
| TCTCTTCATCCACGCGTTTG+AGG | - | chr8_3:45714165-45714184 | Msa1290740:CDS | 50.0% | |
| TGCCTCCACAAGTACGCTTA+TGG | - | chr8_3:45714620-45714639 | Msa1290740:CDS | 50.0% | |
| TTGTGCCAATGTGCTGTCCT+TGG | - | chr8_3:45715011-45715030 | Msa1290740:intron | 50.0% | |
| TGTCCTTGGCCCTTTGCAAT+TGG | - | chr8_3:45715025-45715044 | Msa1290740:intron | 50.0% | |
| ! | CGCAGTTTTGCAAGCACGTA+TGG | + | chr8_3:45715546-45715565 | None:intergenic | 50.0% |
| ATGACCAACACTACAGGCAC+CGG | - | chr8_3:45715627-45715646 | Msa1290740:intron | 50.0% | |
| TATTCCGGTGCCTGTAGTGT+TGG | + | chr8_3:45715634-45715653 | None:intergenic | 50.0% | |
| ! | CTTGGCTACCCCACACATTT+TGG | - | chr8_3:45715680-45715699 | Msa1290740:intron | 50.0% |
| ! | GGGACTTGCTCTTTGTGCTT+TGG | - | chr8_3:45715983-45716002 | Msa1290740:intron | 50.0% |
| AAGGGCCAAGGACAGCACAT+TGG | + | chr8_3:45715019-45715038 | None:intergenic | 55.0% | |
| TGCTTGCAAAACTGCGGCAG+AGG | - | chr8_3:45715550-45715569 | Msa1290740:intron | 55.0% | |
| ACCTTGCACCAGAGGTTGAG+AGG | - | chr8_3:45716036-45716055 | Msa1290740:intron | 55.0% | |
| ACCTCTCAACCTCTGGTGCA+AGG | + | chr8_3:45716040-45716059 | None:intergenic | 55.0% | |
| TGCAGCAACCTCTCAACCTC+TGG | + | chr8_3:45716047-45716066 | None:intergenic | 55.0% | |
| CAGGAGAGGAAAACAGGCCA+TGG | - | chr8_3:45716199-45716218 | Msa1290740:exon | 55.0% | |
| AAGGGCCAAGGACAGCACAT+TGG | + | chr8_3:45715019-45715038 | None:intergenic | 55.0% | |
| TGCTTGCAAAACTGCGGCAG+AGG | - | chr8_3:45715550-45715569 | Msa1290740:intron | 55.0% | |
| ACCTTGCACCAGAGGTTGAG+AGG | - | chr8_3:45716036-45716055 | Msa1290740:intron | 55.0% | |
| ACCTCTCAACCTCTGGTGCA+AGG | + | chr8_3:45716040-45716059 | None:intergenic | 55.0% | |
| TGCAGCAACCTCTCAACCTC+TGG | + | chr8_3:45716047-45716066 | None:intergenic | 55.0% | |
| CAGGAGAGGAAAACAGGCCA+TGG | - | chr8_3:45716199-45716218 | Msa1290740:exon | 55.0% | |
| GTGTGGGGTAGCCAAGCATG+TGG | + | chr8_3:45715676-45715695 | None:intergenic | 60.0% | |
| GTGTGGGGTAGCCAAGCATG+TGG | + | chr8_3:45715676-45715695 | None:intergenic | 60.0% | |
| GGCTCGTGACCTTGCACCAG+AGG | - | chr8_3:45716028-45716047 | Msa1290740:intron | 65.0% | |
| GGCTCGTGACCTTGCACCAG+AGG | - | chr8_3:45716028-45716047 | Msa1290740:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 45713924 | 45716305 | 45713924 | ID=Msa1290740;Name=Msa1290740 |
| chr8_3 | mRNA | 45713924 | 45716305 | 45713924 | ID=Msa1290740-mRNA-1;Parent=Msa1290740;Name=Msa1290740-mRNA-1;_AED=0.00;_eAED=0.00;_QI=98|1|1|1|1|1|3|208|203 |
| chr8_3 | exon | 45713924 | 45714276 | 45713924 | ID=Msa1290740-mRNA-1:exon:12651;Parent=Msa1290740-mRNA-1 |
| chr8_3 | exon | 45714398 | 45714699 | 45714398 | ID=Msa1290740-mRNA-1:exon:12650;Parent=Msa1290740-mRNA-1 |
| chr8_3 | exon | 45716043 | 45716305 | 45716043 | ID=Msa1290740-mRNA-1:exon:12649;Parent=Msa1290740-mRNA-1 |
| chr8_3 | five_prime_UTR | 45716208 | 45716305 | 45716208 | ID=Msa1290740-mRNA-1:five_prime_utr;Parent=Msa1290740-mRNA-1 |
| chr8_3 | CDS | 45716043 | 45716207 | 45716043 | ID=Msa1290740-mRNA-1:cds;Parent=Msa1290740-mRNA-1 |
| chr8_3 | CDS | 45714398 | 45714699 | 45714398 | ID=Msa1290740-mRNA-1:cds;Parent=Msa1290740-mRNA-1 |
| chr8_3 | CDS | 45714132 | 45714276 | 45714132 | ID=Msa1290740-mRNA-1:cds;Parent=Msa1290740-mRNA-1 |
| chr8_3 | three_prime_UTR | 45713924 | 45714131 | 45713924 | ID=Msa1290740-mRNA-1:three_prime_utr;Parent=Msa1290740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
