Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1293760 | XP_003629044.1 | 88.116 | 345 | 39 | 1 | 1 | 345 | 1 | 343 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1293760 | sp|Q8GYH5|BAD1_ARATH | 38.284 | 303 | 178 | 3 | 11 | 306 | 4 | 304 | 1.21e-64 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1293760 | G7L7W8 | 88.116 | 345 | 39 | 1 | 1 | 345 | 1 | 343 | 0.0 | 618 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0745070 | Msa1293760 | 0.817513 | 3.172393e-52 | -8.615850e-47 |
| Msa1293760 | Msa1376450 | 0.814155 | 1.779090e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1293760 | MtrunA17_Chr8g0369921 | 88.116 | 345 | 39 | 1 | 1 | 345 | 1 | 343 | 0.0 | 618 |
| Msa1293760 | MtrunA17_Chr8g0353311 | 71.714 | 350 | 94 | 2 | 1 | 345 | 1 | 350 | 6.88e-177 | 498 |
| Msa1293760 | MtrunA17_Chr8g0364031 | 73.199 | 347 | 82 | 4 | 1 | 345 | 1 | 338 | 7.30e-173 | 488 |
| Msa1293760 | MtrunA17_Chr3g0083331 | 67.120 | 368 | 104 | 3 | 1 | 353 | 1 | 366 | 1.22e-170 | 482 |
| Msa1293760 | MtrunA17_Chr7g0221531 | 70.175 | 342 | 95 | 3 | 5 | 345 | 2 | 337 | 1.39e-169 | 478 |
| Msa1293760 | MtrunA17_Chr8g0367671 | 66.954 | 348 | 109 | 3 | 1 | 344 | 1 | 346 | 5.90e-168 | 475 |
| Msa1293760 | MtrunA17_Chr7g0233331 | 68.235 | 340 | 108 | 0 | 5 | 344 | 2 | 341 | 1.72e-163 | 462 |
| Msa1293760 | MtrunA17_Chr1g0178581 | 67.246 | 345 | 112 | 1 | 1 | 344 | 1 | 345 | 2.44e-161 | 459 |
| Msa1293760 | MtrunA17_Chr8g0370361 | 60.694 | 346 | 133 | 2 | 1 | 346 | 1 | 343 | 1.75e-145 | 419 |
| Msa1293760 | MtrunA17_Chr3g0093531 | 65.986 | 294 | 97 | 1 | 54 | 344 | 1 | 294 | 1.67e-135 | 390 |
| Msa1293760 | MtrunA17_Chr8g0354071 | 65.646 | 294 | 98 | 1 | 54 | 344 | 1 | 294 | 1.67e-135 | 390 |
| Msa1293760 | MtrunA17_Chr8g0368621 | 63.430 | 309 | 111 | 2 | 8 | 315 | 3 | 310 | 4.67e-134 | 385 |
| Msa1293760 | MtrunA17_Chr8g0361991 | 57.681 | 345 | 135 | 3 | 11 | 344 | 10 | 354 | 3.93e-129 | 377 |
| Msa1293760 | MtrunA17_Chr3g0136651 | 51.290 | 310 | 143 | 2 | 10 | 312 | 3 | 311 | 3.23e-103 | 310 |
| Msa1293760 | MtrunA17_Chr8g0366431 | 57.831 | 249 | 103 | 2 | 100 | 347 | 20 | 267 | 2.79e-93 | 282 |
| Msa1293760 | MtrunA17_Chr8g0370381 | 50.279 | 179 | 67 | 2 | 54 | 218 | 1 | 171 | 3.66e-53 | 173 |
| Msa1293760 | MtrunA17_Chr7g0262761 | 31.111 | 180 | 111 | 3 | 24 | 198 | 24 | 195 | 3.86e-23 | 95.9 |
| Msa1293760 | MtrunA17_Chr7g0262731 | 31.088 | 193 | 119 | 3 | 12 | 199 | 9 | 192 | 3.35e-22 | 97.8 |
| Msa1293760 | MtrunA17_Chr2g0331201 | 28.507 | 221 | 140 | 4 | 43 | 255 | 137 | 347 | 1.24e-20 | 93.2 |
| Msa1293760 | MtrunA17_Chr2g0331191 | 30.698 | 215 | 131 | 4 | 43 | 249 | 137 | 341 | 1.88e-19 | 89.7 |
| Msa1293760 | MtrunA17_Chr2g0331191 | 23.714 | 350 | 214 | 12 | 12 | 315 | 142 | 484 | 3.07e-12 | 67.8 |
| Msa1293760 | MtrunA17_Chr1g0212971 | 26.829 | 328 | 196 | 9 | 12 | 312 | 135 | 445 | 6.21e-18 | 85.1 |
| Msa1293760 | MtrunA17_Chr7g0276681 | 25.087 | 287 | 181 | 5 | 47 | 311 | 119 | 393 | 6.24e-18 | 85.1 |
| Msa1293760 | MtrunA17_Chr1g0182731 | 32.432 | 111 | 75 | 0 | 15 | 125 | 21 | 131 | 2.62e-17 | 77.8 |
| Msa1293760 | MtrunA17_Chr2g0327711 | 24.471 | 331 | 213 | 6 | 5 | 311 | 63 | 380 | 3.08e-17 | 82.8 |
| Msa1293760 | MtrunA17_Chr1g0161231 | 24.138 | 290 | 183 | 6 | 47 | 311 | 94 | 371 | 7.16e-16 | 78.6 |
| Msa1293760 | MtrunA17_Chr4g0030551 | 23.333 | 330 | 204 | 8 | 12 | 311 | 74 | 384 | 8.96e-16 | 78.6 |
| Msa1293760 | MtrunA17_Chr8g0391711 | 23.793 | 290 | 184 | 5 | 47 | 311 | 101 | 378 | 3.48e-15 | 76.6 |
| Msa1293760 | MtrunA17_Chr5g0439191 | 31.210 | 157 | 96 | 4 | 81 | 233 | 8 | 156 | 8.94e-14 | 68.9 |
| Msa1293760 | MtrunA17_Chr5g0439361 | 27.907 | 172 | 116 | 4 | 62 | 231 | 4 | 169 | 1.63e-13 | 71.2 |
| Msa1293760 | MtrunA17_Chr5g0439351 | 29.825 | 171 | 112 | 4 | 63 | 231 | 320 | 484 | 3.48e-13 | 70.9 |
| Msa1293760 | MtrunA17_Chr8g0370371 | 50.667 | 75 | 31 | 3 | 274 | 344 | 6 | 78 | 2.64e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1293760 | AT4G10720.2 | 41.824 | 318 | 177 | 2 | 11 | 320 | 4 | 321 | 5.29e-80 | 250 |
| Msa1293760 | AT4G10720.1 | 41.824 | 318 | 177 | 2 | 11 | 320 | 4 | 321 | 1.23e-79 | 251 |
| Msa1293760 | AT1G14500.1 | 37.784 | 352 | 203 | 4 | 11 | 353 | 4 | 348 | 1.66e-79 | 250 |
| Msa1293760 | AT1G14480.1 | 39.385 | 325 | 181 | 4 | 11 | 322 | 4 | 325 | 3.95e-76 | 241 |
| Msa1293760 | AT5G15500.2 | 41.935 | 310 | 172 | 3 | 12 | 313 | 6 | 315 | 2.00e-73 | 235 |
| Msa1293760 | AT5G54620.1 | 41.503 | 306 | 172 | 2 | 11 | 309 | 4 | 309 | 8.01e-73 | 233 |
| Msa1293760 | AT5G54610.1 | 38.284 | 303 | 178 | 3 | 11 | 306 | 4 | 304 | 1.23e-65 | 214 |
| Msa1293760 | AT1G14480.2 | 36.859 | 312 | 164 | 5 | 11 | 322 | 4 | 282 | 1.11e-57 | 192 |
| Msa1293760 | AT5G15500.1 | 37.321 | 209 | 123 | 3 | 113 | 313 | 1 | 209 | 1.11e-29 | 117 |
| Msa1293760 | AT5G51160.1 | 28.947 | 266 | 161 | 4 | 74 | 318 | 43 | 301 | 1.14e-27 | 113 |
| Msa1293760 | AT4G03500.1 | 25.455 | 330 | 170 | 11 | 33 | 312 | 199 | 502 | 2.39e-17 | 84.0 |
| Msa1293760 | AT4G03500.2 | 25.455 | 330 | 170 | 11 | 33 | 312 | 176 | 479 | 3.02e-17 | 83.6 |
| Msa1293760 | AT4G03500.3 | 25.455 | 330 | 170 | 11 | 33 | 312 | 176 | 479 | 3.02e-17 | 83.6 |
| Msa1293760 | AT4G03460.1 | 30.493 | 223 | 116 | 6 | 103 | 312 | 290 | 486 | 6.52e-17 | 82.4 |
| Msa1293760 | AT4G03460.2 | 30.493 | 223 | 116 | 6 | 103 | 312 | 258 | 454 | 7.49e-17 | 82.4 |
| Msa1293760 | AT2G01680.1 | 22.697 | 304 | 198 | 5 | 47 | 325 | 97 | 388 | 3.55e-16 | 80.1 |
| Msa1293760 | AT1G34050.1 | 25.574 | 305 | 182 | 10 | 34 | 315 | 141 | 423 | 6.83e-16 | 79.3 |
| Msa1293760 | AT3G12360.1 | 26.621 | 293 | 172 | 8 | 47 | 312 | 167 | 443 | 1.03e-15 | 79.0 |
| Msa1293760 | AT3G12360.2 | 26.621 | 293 | 172 | 8 | 47 | 312 | 155 | 431 | 1.08e-15 | 78.6 |
| Msa1293760 | AT1G10340.2 | 24.688 | 320 | 200 | 6 | 28 | 315 | 118 | 428 | 2.28e-15 | 77.8 |
| Msa1293760 | AT1G10340.1 | 25.564 | 266 | 158 | 5 | 82 | 315 | 175 | 432 | 3.24e-15 | 77.4 |
| Msa1293760 | AT1G07710.2 | 25.077 | 323 | 206 | 8 | 12 | 311 | 70 | 379 | 3.61e-15 | 77.0 |
| Msa1293760 | AT1G07710.1 | 25.077 | 323 | 206 | 8 | 12 | 311 | 70 | 379 | 3.61e-15 | 77.0 |
| Msa1293760 | AT5G54700.2 | 28.182 | 220 | 120 | 6 | 104 | 319 | 23 | 208 | 3.84e-15 | 75.9 |
| Msa1293760 | AT1G03670.1 | 28.444 | 225 | 126 | 6 | 104 | 318 | 279 | 478 | 4.44e-15 | 77.0 |
| Msa1293760 | AT4G03490.3 | 27.358 | 318 | 174 | 12 | 12 | 323 | 211 | 477 | 4.85e-15 | 77.0 |
| Msa1293760 | AT1G05640.1 | 26.389 | 288 | 176 | 8 | 47 | 311 | 191 | 465 | 5.10e-15 | 76.6 |
| Msa1293760 | AT4G03490.5 | 27.358 | 318 | 174 | 12 | 12 | 323 | 201 | 467 | 8.52e-15 | 75.9 |
| Msa1293760 | AT4G03490.4 | 27.358 | 318 | 174 | 12 | 12 | 323 | 211 | 477 | 9.51e-15 | 75.9 |
| Msa1293760 | AT2G24600.2 | 26.692 | 266 | 155 | 8 | 82 | 315 | 175 | 432 | 1.08e-14 | 75.5 |
| Msa1293760 | AT2G24600.1 | 26.692 | 266 | 155 | 8 | 82 | 315 | 175 | 432 | 1.08e-14 | 75.5 |
| Msa1293760 | AT2G24600.3 | 26.692 | 266 | 155 | 8 | 82 | 315 | 175 | 432 | 1.62e-14 | 75.1 |
| Msa1293760 | AT2G24600.4 | 26.692 | 266 | 155 | 8 | 82 | 315 | 175 | 432 | 1.62e-14 | 75.1 |
| Msa1293760 | AT3G09550.1 | 24.620 | 329 | 202 | 9 | 12 | 312 | 147 | 457 | 3.18e-13 | 71.2 |
| Msa1293760 | AT3G09550.3 | 24.620 | 329 | 202 | 9 | 12 | 312 | 147 | 457 | 3.18e-13 | 71.2 |
| Msa1293760 | AT3G09550.2 | 24.620 | 329 | 202 | 9 | 12 | 312 | 154 | 464 | 3.83e-13 | 70.9 |
| Msa1293760 | AT4G03480.2 | 26.266 | 316 | 163 | 12 | 12 | 313 | 357 | 616 | 5.47e-12 | 67.4 |
| Msa1293760 | AT4G03480.1 | 26.266 | 316 | 163 | 12 | 12 | 313 | 360 | 619 | 6.39e-12 | 67.4 |
| Msa1293760 | AT2G31820.1 | 23.611 | 288 | 184 | 9 | 47 | 311 | 227 | 501 | 1.90e-11 | 65.9 |
Find 68 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGATGATCCATACATTT+TGG | 0.169438 | 8_3:+51218436 | Msa1293760:CDS |
| AAAGACCTTGTTAGAGTTAG+AGG | 0.240322 | 8_3:+51218656 | Msa1293760:CDS |
| AACACCACAAACACAAATAA+TGG | 0.318375 | 8_3:+51218356 | Msa1293760:CDS |
| ATATAAGGTATTTGATTGTA+TGG | 0.320993 | 8_3:-51218276 | None:intergenic |
| TGGGGTAGAAATGGTAAAAT+TGG | 0.321057 | 8_3:-51219502 | None:intergenic |
| ACTGATTTCCCAACATTTCC+TGG | 0.324820 | 8_3:-51219522 | None:intergenic |
| GTTCATTCTTAACAGCAATA+TGG | 0.326006 | 8_3:-51218802 | None:intergenic |
| GTCAAGTACTCAATGGATTC+TGG | 0.341749 | 8_3:-51218758 | None:intergenic |
| ATCTCCATTATTTGTGTTTG+TGG | 0.350305 | 8_3:-51218360 | None:intergenic |
| GCAAGATAAAACAAAATATA+AGG | 0.368122 | 8_3:-51218291 | None:intergenic |
| CTCTCTAGTGGCTTCTCCAA+TGG | 0.385412 | 8_3:+51219647 | Msa1293760:intron |
| AGATTTGAAGGCAAATAATA+TGG | 0.389853 | 8_3:+51219167 | Msa1293760:CDS |
| TTTACATATTGCTGCATCCA+TGG | 0.394377 | 8_3:+51218493 | Msa1293760:CDS |
| GCGAAGAGGGGCTAAAGATC+TGG | 0.403132 | 8_3:+51218871 | Msa1293760:CDS |
| TTTCACATTCATAATTTCAA+TGG | 0.408653 | 8_3:-51218531 | None:intergenic |
| GTTGGGAAATCAGTCTTGTC+AGG | 0.412181 | 8_3:+51219531 | Msa1293760:CDS |
| AACATTTCCTGGGGTAGAAA+TGG | 0.413623 | 8_3:-51219511 | None:intergenic |
| TAGTGCTGAAATGTGCAAAA+TGG | 0.415741 | 8_3:-51218933 | None:intergenic |
| CTCTTCAAGTACTTGTTAGC+TGG | 0.417708 | 8_3:+51218834 | Msa1293760:CDS |
| TCTCTAGTGGCTTCTCCAAT+GGG | 0.422655 | 8_3:+51219648 | Msa1293760:intron |
| AGATCAAAGATCACAACTAT+AGG | 0.431883 | 8_3:+51219306 | Msa1293760:CDS |
| TAGTGGCTTCTCCAATGGGC+TGG | 0.441345 | 8_3:+51219652 | Msa1293760:intron |
| TCTATACGCTCCAAAATGTA+TGG | 0.444576 | 8_3:-51218446 | None:intergenic |
| AATATTAAACAGAAGGGATA+AGG | 0.446119 | 8_3:+51218901 | Msa1293760:CDS |
| TGTAAAGGAGTTTCAACAAA+TGG | 0.448723 | 8_3:-51218476 | None:intergenic |
| TTTAGCTTCAAAGCAAATGA+AGG | 0.453815 | 8_3:-51218554 | None:intergenic |
| ACACAGGCAGTTCTATTGTT+GGG | 0.467417 | 8_3:+51219132 | Msa1293760:intron |
| ACTCAATGCTGATTGATAGA+TGG | 0.480622 | 8_3:-51219421 | None:intergenic |
| TTGAAAGCTGCAGCTGAAGC+AGG | 0.480701 | 8_3:+51218386 | Msa1293760:CDS |
| AACACAGGCAGTTCTATTGT+TGG | 0.484666 | 8_3:+51219131 | Msa1293760:intron |
| AATAATATACTCTTGATCTC+TGG | 0.490722 | 8_3:-51219222 | None:intergenic |
| AGTTAAGTTACTTTCTCAGT+TGG | 0.492962 | 8_3:+51218732 | Msa1293760:CDS |
| TTTCTACCCCAGGAAATGTT+GGG | 0.494162 | 8_3:+51219514 | Msa1293760:CDS |
| CTGATTTCCCAACATTTCCT+GGG | 0.500204 | 8_3:-51219521 | None:intergenic |
| ATTTCTACCCCAGGAAATGT+TGG | 0.503031 | 8_3:+51219513 | Msa1293760:CDS |
| AAGTACTAGTATAGATTTGA+AGG | 0.503292 | 8_3:+51219155 | Msa1293760:CDS |
| TGTTAAGAATGAACAATATG+AGG | 0.511815 | 8_3:+51218811 | Msa1293760:CDS |
| TTACATATTGCTGCATCCAT+GGG | 0.527095 | 8_3:+51218494 | Msa1293760:CDS |
| AAGAGTATATTATTAAGCGT+TGG | 0.530456 | 8_3:+51219231 | Msa1293760:CDS |
| AAAATAAAATATTAAACAGA+AGG | 0.532425 | 8_3:+51218894 | Msa1293760:CDS |
| TAATCATTGACTTCTAAGCT+AGG | 0.536154 | 8_3:-51219261 | None:intergenic |
| TCTTATTCTATGATCAAATG+TGG | 0.536536 | 8_3:-51219286 | None:intergenic |
| CCTCACAGTCAAGTACTCAA+TGG | 0.542319 | 8_3:-51218765 | None:intergenic |
| GTTAGAGTTAGAGGAAGAGA+AGG | 0.542608 | 8_3:+51218665 | Msa1293760:CDS |
| GGTAGAAATGGTAAAATTGG+AGG | 0.549602 | 8_3:-51219499 | None:intergenic |
| AAATAAAATATTAAACAGAA+GGG | 0.562493 | 8_3:+51218895 | Msa1293760:CDS |
| CAGAGGAGCAACGTAACACT+TGG | 0.565419 | 8_3:+51219370 | Msa1293760:CDS |
| ATTTGACTTGCAAAATGAAG+AGG | 0.571878 | 8_3:-51218695 | None:intergenic |
| ATGGATGCAGCAATATGTAA+AGG | 0.578412 | 8_3:-51218491 | None:intergenic |
| CTCTTCCTCTAACTCTAACA+AGG | 0.583494 | 8_3:-51218661 | None:intergenic |
| CTAGCGGTAAACCAGCCCAT+TGG | 0.586099 | 8_3:-51219663 | None:intergenic |
| TTAAACAGAAGGGATAAGGC+AGG | 0.594049 | 8_3:+51218905 | Msa1293760:CDS |
| TTTGCATAGCGAGATGGATG+GGG | 0.598780 | 8_3:-51218592 | None:intergenic |
| GGCAAAGTCGATATGACCCA+TGG | 0.604662 | 8_3:-51218510 | None:intergenic |
| CTAACCTGATAAATTCCACC+GGG | 0.607279 | 8_3:-51219447 | None:intergenic |
| AGCACTAAGTAGTGACCCAC+AGG | 0.611178 | 8_3:+51218949 | Msa1293760:CDS |
| CTTATTCTATGATCAAATGT+GGG | 0.616818 | 8_3:-51219285 | None:intergenic |
| ACTAACCTGATAAATTCCAC+CGG | 0.617401 | 8_3:-51219448 | None:intergenic |
| TTGGGAAATCAGTCTTGTCA+GGG | 0.629970 | 8_3:+51219532 | Msa1293760:CDS |
| CATCTTGAATTACTGCGTAG+AGG | 0.646104 | 8_3:-51218421 | None:intergenic |
| GCTTTGAAGCTAAATCCGCA+AGG | 0.665685 | 8_3:+51218563 | Msa1293760:CDS |
| TGATTTCCCAACATTTCCTG+GGG | 0.666728 | 8_3:-51219520 | None:intergenic |
| TGGATGGGGCTGAATCCTTG+CGG | 0.668802 | 8_3:-51218578 | None:intergenic |
| AACCTGATAAATTCCACCGG+GGG | 0.670751 | 8_3:-51219445 | None:intergenic |
| CCATTGAGTACTTGACTGTG+AGG | 0.685885 | 8_3:+51218765 | Msa1293760:CDS |
| ACCTGATAAATTCCACCGGG+GGG | 0.705401 | 8_3:-51219444 | None:intergenic |
| CATTACAAGAGACATATCAG+AGG | 0.719050 | 8_3:+51219353 | Msa1293760:CDS |
| TAACCTGATAAATTCCACCG+GGG | 0.729886 | 8_3:-51219446 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATATTAAACAGA+AGG | + | chr8_3:51218894-51218913 | Msa1293760:CDS | 10.0% |
| !! | AAATAAAATATTAAACAGAA+GGG | + | chr8_3:51218895-51218914 | Msa1293760:CDS | 10.0% |
| !!! | TATCTTATTTATATATAAGT+TGG | - | chr8_3:51219047-51219066 | None:intergenic | 10.0% |
| !! | AAAATAAAATATTAAACAGA+AGG | + | chr8_3:51218894-51218913 | Msa1293760:CDS | 10.0% |
| !! | AAATAAAATATTAAACAGAA+GGG | + | chr8_3:51218895-51218914 | Msa1293760:CDS | 10.0% |
| !!! | TATCTTATTTATATATAAGT+TGG | - | chr8_3:51219047-51219066 | None:intergenic | 10.0% |
| !!! | TATTTATATATAAGTTGGTA+GGG | - | chr8_3:51219042-51219061 | None:intergenic | 15.0% |
| !!! | TTATTTATATATAAGTTGGT+AGG | - | chr8_3:51219043-51219062 | None:intergenic | 15.0% |
| !! | TGTATTATTCATTAATTTCT+TGG | + | chr8_3:51219107-51219126 | Msa1293760:intron | 15.0% |
| !!! | ATATTTTTTATGATACCATA+TGG | + | chr8_3:51219615-51219634 | Msa1293760:intron | 15.0% |
| !!! | TATTTATATATAAGTTGGTA+GGG | - | chr8_3:51219042-51219061 | None:intergenic | 15.0% |
| !!! | TTATTTATATATAAGTTGGT+AGG | - | chr8_3:51219043-51219062 | None:intergenic | 15.0% |
| !! | TGTATTATTCATTAATTTCT+TGG | + | chr8_3:51219107-51219126 | Msa1293760:intron | 15.0% |
| !!! | ATATTTTTTATGATACCATA+TGG | + | chr8_3:51219615-51219634 | Msa1293760:intron | 15.0% |
| !!! | ATATAAGGTATTTGATTGTA+TGG | - | chr8_3:51218279-51218298 | None:intergenic | 20.0% |
| !! | GCAAGATAAAACAAAATATA+AGG | - | chr8_3:51218294-51218313 | None:intergenic | 20.0% |
| !! | TTTCACATTCATAATTTCAA+TGG | - | chr8_3:51218534-51218553 | None:intergenic | 20.0% |
| !!! | ATTTATATATAAGTTGGTAG+GGG | - | chr8_3:51219041-51219060 | None:intergenic | 20.0% |
| !!! | ATATAAGGTATTTGATTGTA+TGG | - | chr8_3:51218279-51218298 | None:intergenic | 20.0% |
| !! | GCAAGATAAAACAAAATATA+AGG | - | chr8_3:51218294-51218313 | None:intergenic | 20.0% |
| !! | TTTCACATTCATAATTTCAA+TGG | - | chr8_3:51218534-51218553 | None:intergenic | 20.0% |
| !!! | ATTTATATATAAGTTGGTAG+GGG | - | chr8_3:51219041-51219060 | None:intergenic | 20.0% |
| ! | TGTTAAGAATGAACAATATG+AGG | + | chr8_3:51218811-51218830 | Msa1293760:CDS | 25.0% |
| ! | AATATTAAACAGAAGGGATA+AGG | + | chr8_3:51218901-51218920 | Msa1293760:CDS | 25.0% |
| ! | ATAAGATTAAGATTACCTGT+GGG | - | chr8_3:51218967-51218986 | None:intergenic | 25.0% |
| ! | AAGTACTAGTATAGATTTGA+AGG | + | chr8_3:51219155-51219174 | Msa1293760:CDS | 25.0% |
| ! | AGATTTGAAGGCAAATAATA+TGG | + | chr8_3:51219167-51219186 | Msa1293760:CDS | 25.0% |
| ! | AATAATATACTCTTGATCTC+TGG | - | chr8_3:51219225-51219244 | None:intergenic | 25.0% |
| !! | AAGAGTATATTATTAAGCGT+TGG | + | chr8_3:51219231-51219250 | Msa1293760:CDS | 25.0% |
| ! | CTTATTCTATGATCAAATGT+GGG | - | chr8_3:51219288-51219307 | None:intergenic | 25.0% |
| ! | TCTTATTCTATGATCAAATG+TGG | - | chr8_3:51219289-51219308 | None:intergenic | 25.0% |
| ! | AGCTAAAATTGATACAGAAA+AGG | - | chr8_3:51219595-51219614 | None:intergenic | 25.0% |
| ! | AGAGAGAATATTATTCCATA+TGG | - | chr8_3:51219633-51219652 | None:intergenic | 25.0% |
| ! | TGTTAAGAATGAACAATATG+AGG | + | chr8_3:51218811-51218830 | Msa1293760:CDS | 25.0% |
| ! | AATATTAAACAGAAGGGATA+AGG | + | chr8_3:51218901-51218920 | Msa1293760:CDS | 25.0% |
| ! | ATAAGATTAAGATTACCTGT+GGG | - | chr8_3:51218967-51218986 | None:intergenic | 25.0% |
| ! | AAGTACTAGTATAGATTTGA+AGG | + | chr8_3:51219155-51219174 | Msa1293760:CDS | 25.0% |
| ! | AGATTTGAAGGCAAATAATA+TGG | + | chr8_3:51219167-51219186 | Msa1293760:CDS | 25.0% |
| ! | AATAATATACTCTTGATCTC+TGG | - | chr8_3:51219225-51219244 | None:intergenic | 25.0% |
| !! | AAGAGTATATTATTAAGCGT+TGG | + | chr8_3:51219231-51219250 | Msa1293760:CDS | 25.0% |
| ! | CTTATTCTATGATCAAATGT+GGG | - | chr8_3:51219288-51219307 | None:intergenic | 25.0% |
| ! | TCTTATTCTATGATCAAATG+TGG | - | chr8_3:51219289-51219308 | None:intergenic | 25.0% |
| ! | AGCTAAAATTGATACAGAAA+AGG | - | chr8_3:51219595-51219614 | None:intergenic | 25.0% |
| ! | AGAGAGAATATTATTCCATA+TGG | - | chr8_3:51219633-51219652 | None:intergenic | 25.0% |
| AACACCACAAACACAAATAA+TGG | + | chr8_3:51218356-51218375 | Msa1293760:CDS | 30.0% | |
| ATCTCCATTATTTGTGTTTG+TGG | - | chr8_3:51218363-51218382 | None:intergenic | 30.0% | |
| ! | TCAAGATGATCCATACATTT+TGG | + | chr8_3:51218436-51218455 | Msa1293760:CDS | 30.0% |
| TGTAAAGGAGTTTCAACAAA+TGG | - | chr8_3:51218479-51218498 | None:intergenic | 30.0% | |
| ! | TTTAGCTTCAAAGCAAATGA+AGG | - | chr8_3:51218557-51218576 | None:intergenic | 30.0% |
| GCAAAACAACAAAAAACGAA+TGG | + | chr8_3:51218610-51218629 | Msa1293760:CDS | 30.0% | |
| !! | ATTTGACTTGCAAAATGAAG+AGG | - | chr8_3:51218698-51218717 | None:intergenic | 30.0% |
| ! | TCTTCATTTTGCAAGTCAAA+TGG | + | chr8_3:51218697-51218716 | Msa1293760:CDS | 30.0% |
| ! | CTTCATTTTGCAAGTCAAAT+GGG | + | chr8_3:51218698-51218717 | Msa1293760:CDS | 30.0% |
| ! | AGTTAAGTTACTTTCTCAGT+TGG | + | chr8_3:51218732-51218751 | Msa1293760:CDS | 30.0% |
| GTTCATTCTTAACAGCAATA+TGG | - | chr8_3:51218805-51218824 | None:intergenic | 30.0% | |
| TCAAAAAAAATACGCGAAGA+GGG | + | chr8_3:51218858-51218877 | Msa1293760:CDS | 30.0% | |
| CATAAGATTAAGATTACCTG+TGG | - | chr8_3:51218968-51218987 | None:intergenic | 30.0% | |
| !! | GAGACATGTGATTTTAGTAA+TGG | - | chr8_3:51218991-51219010 | None:intergenic | 30.0% |
| ! | CATTAATTTCTTGGTAACAC+AGG | + | chr8_3:51219116-51219135 | Msa1293760:intron | 30.0% |
| !! | TAATCATTGACTTCTAAGCT+AGG | - | chr8_3:51219264-51219283 | None:intergenic | 30.0% |
| AGATCAAAGATCACAACTAT+AGG | + | chr8_3:51219306-51219325 | Msa1293760:CDS | 30.0% | |
| TGGAATAATATTCTCTCTAG+TGG | + | chr8_3:51219635-51219654 | Msa1293760:intron | 30.0% | |
| AACACCACAAACACAAATAA+TGG | + | chr8_3:51218356-51218375 | Msa1293760:CDS | 30.0% | |
| ATCTCCATTATTTGTGTTTG+TGG | - | chr8_3:51218363-51218382 | None:intergenic | 30.0% | |
| ! | TCAAGATGATCCATACATTT+TGG | + | chr8_3:51218436-51218455 | Msa1293760:CDS | 30.0% |
| TGTAAAGGAGTTTCAACAAA+TGG | - | chr8_3:51218479-51218498 | None:intergenic | 30.0% | |
| ! | TTTAGCTTCAAAGCAAATGA+AGG | - | chr8_3:51218557-51218576 | None:intergenic | 30.0% |
| GCAAAACAACAAAAAACGAA+TGG | + | chr8_3:51218610-51218629 | Msa1293760:CDS | 30.0% | |
| !! | ATTTGACTTGCAAAATGAAG+AGG | - | chr8_3:51218698-51218717 | None:intergenic | 30.0% |
| ! | TCTTCATTTTGCAAGTCAAA+TGG | + | chr8_3:51218697-51218716 | Msa1293760:CDS | 30.0% |
| ! | CTTCATTTTGCAAGTCAAAT+GGG | + | chr8_3:51218698-51218717 | Msa1293760:CDS | 30.0% |
| ! | AGTTAAGTTACTTTCTCAGT+TGG | + | chr8_3:51218732-51218751 | Msa1293760:CDS | 30.0% |
| GTTCATTCTTAACAGCAATA+TGG | - | chr8_3:51218805-51218824 | None:intergenic | 30.0% | |
| TCAAAAAAAATACGCGAAGA+GGG | + | chr8_3:51218858-51218877 | Msa1293760:CDS | 30.0% | |
| CATAAGATTAAGATTACCTG+TGG | - | chr8_3:51218968-51218987 | None:intergenic | 30.0% | |
| !! | GAGACATGTGATTTTAGTAA+TGG | - | chr8_3:51218991-51219010 | None:intergenic | 30.0% |
| ! | CATTAATTTCTTGGTAACAC+AGG | + | chr8_3:51219116-51219135 | Msa1293760:intron | 30.0% |
| !! | TAATCATTGACTTCTAAGCT+AGG | - | chr8_3:51219264-51219283 | None:intergenic | 30.0% |
| AGATCAAAGATCACAACTAT+AGG | + | chr8_3:51219306-51219325 | Msa1293760:CDS | 30.0% | |
| TGGAATAATATTCTCTCTAG+TGG | + | chr8_3:51219635-51219654 | Msa1293760:intron | 30.0% | |
| TCTATACGCTCCAAAATGTA+TGG | - | chr8_3:51218449-51218468 | None:intergenic | 35.0% | |
| ATGGATGCAGCAATATGTAA+AGG | - | chr8_3:51218494-51218513 | None:intergenic | 35.0% | |
| TTTACATATTGCTGCATCCA+TGG | + | chr8_3:51218493-51218512 | Msa1293760:CDS | 35.0% | |
| TTACATATTGCTGCATCCAT+GGG | + | chr8_3:51218494-51218513 | Msa1293760:CDS | 35.0% | |
| AAAGACCTTGTTAGAGTTAG+AGG | + | chr8_3:51218656-51218675 | Msa1293760:CDS | 35.0% | |
| CTCAAAAAAAATACGCGAAG+AGG | + | chr8_3:51218857-51218876 | Msa1293760:CDS | 35.0% | |
| CAAAAAAAATACGCGAAGAG+GGG | + | chr8_3:51218859-51218878 | Msa1293760:CDS | 35.0% | |
| ! | TAGTGCTGAAATGTGCAAAA+TGG | - | chr8_3:51218936-51218955 | None:intergenic | 35.0% |
| AGGCGACAAGAACTATATAA+AGG | - | chr8_3:51219013-51219032 | None:intergenic | 35.0% | |
| !! | ATATATAAGTTGGTAGGGGA+GGG | - | chr8_3:51219037-51219056 | None:intergenic | 35.0% |
| !! | TATATATAAGTTGGTAGGGG+AGG | - | chr8_3:51219038-51219057 | None:intergenic | 35.0% |
| CATTACAAGAGACATATCAG+AGG | + | chr8_3:51219353-51219372 | Msa1293760:CDS | 35.0% | |
| ! | ACTCAATGCTGATTGATAGA+TGG | - | chr8_3:51219424-51219443 | None:intergenic | 35.0% |
| ACTAACCTGATAAATTCCAC+CGG | - | chr8_3:51219451-51219470 | None:intergenic | 35.0% | |
| GGTAGAAATGGTAAAATTGG+AGG | - | chr8_3:51219502-51219521 | None:intergenic | 35.0% | |
| TGGGGTAGAAATGGTAAAAT+TGG | - | chr8_3:51219505-51219524 | None:intergenic | 35.0% | |
| ! | AATTTTACCATTTCTACCCC+AGG | + | chr8_3:51219504-51219523 | Msa1293760:CDS | 35.0% |
| TCTATACGCTCCAAAATGTA+TGG | - | chr8_3:51218449-51218468 | None:intergenic | 35.0% | |
| ATGGATGCAGCAATATGTAA+AGG | - | chr8_3:51218494-51218513 | None:intergenic | 35.0% | |
| TTTACATATTGCTGCATCCA+TGG | + | chr8_3:51218493-51218512 | Msa1293760:CDS | 35.0% | |
| TTACATATTGCTGCATCCAT+GGG | + | chr8_3:51218494-51218513 | Msa1293760:CDS | 35.0% | |
| AAAGACCTTGTTAGAGTTAG+AGG | + | chr8_3:51218656-51218675 | Msa1293760:CDS | 35.0% | |
| CTCAAAAAAAATACGCGAAG+AGG | + | chr8_3:51218857-51218876 | Msa1293760:CDS | 35.0% | |
| CAAAAAAAATACGCGAAGAG+GGG | + | chr8_3:51218859-51218878 | Msa1293760:CDS | 35.0% | |
| ! | TAGTGCTGAAATGTGCAAAA+TGG | - | chr8_3:51218936-51218955 | None:intergenic | 35.0% |
| AGGCGACAAGAACTATATAA+AGG | - | chr8_3:51219013-51219032 | None:intergenic | 35.0% | |
| !! | ATATATAAGTTGGTAGGGGA+GGG | - | chr8_3:51219037-51219056 | None:intergenic | 35.0% |
| !! | TATATATAAGTTGGTAGGGG+AGG | - | chr8_3:51219038-51219057 | None:intergenic | 35.0% |
| CATTACAAGAGACATATCAG+AGG | + | chr8_3:51219353-51219372 | Msa1293760:CDS | 35.0% | |
| ! | ACTCAATGCTGATTGATAGA+TGG | - | chr8_3:51219424-51219443 | None:intergenic | 35.0% |
| ACTAACCTGATAAATTCCAC+CGG | - | chr8_3:51219451-51219470 | None:intergenic | 35.0% | |
| GGTAGAAATGGTAAAATTGG+AGG | - | chr8_3:51219502-51219521 | None:intergenic | 35.0% | |
| TGGGGTAGAAATGGTAAAAT+TGG | - | chr8_3:51219505-51219524 | None:intergenic | 35.0% | |
| ! | AATTTTACCATTTCTACCCC+AGG | + | chr8_3:51219504-51219523 | Msa1293760:CDS | 35.0% |
| CATCTTGAATTACTGCGTAG+AGG | - | chr8_3:51218424-51218443 | None:intergenic | 40.0% | |
| ! | TTTTGCATAGCGAGATGGAT+GGG | - | chr8_3:51218596-51218615 | None:intergenic | 40.0% |
| !!! | TGTTGTTTTGCATAGCGAGA+TGG | - | chr8_3:51218601-51218620 | None:intergenic | 40.0% |
| CTCTTCCTCTAACTCTAACA+AGG | - | chr8_3:51218664-51218683 | None:intergenic | 40.0% | |
| GTTAGAGTTAGAGGAAGAGA+AGG | + | chr8_3:51218665-51218684 | Msa1293760:CDS | 40.0% | |
| ! | GTCAAGTACTCAATGGATTC+TGG | - | chr8_3:51218761-51218780 | None:intergenic | 40.0% |
| ! | CTCTTCAAGTACTTGTTAGC+TGG | + | chr8_3:51218834-51218853 | Msa1293760:CDS | 40.0% |
| TTAAACAGAAGGGATAAGGC+AGG | + | chr8_3:51218905-51218924 | Msa1293760:CDS | 40.0% | |
| !! | TATATAAGTTGGTAGGGGAG+GGG | - | chr8_3:51219036-51219055 | None:intergenic | 40.0% |
| AACACAGGCAGTTCTATTGT+TGG | + | chr8_3:51219131-51219150 | Msa1293760:intron | 40.0% | |
| ACACAGGCAGTTCTATTGTT+GGG | + | chr8_3:51219132-51219151 | Msa1293760:intron | 40.0% | |
| TAACCTGATAAATTCCACCG+GGG | - | chr8_3:51219449-51219468 | None:intergenic | 40.0% | |
| CTAACCTGATAAATTCCACC+GGG | - | chr8_3:51219450-51219469 | None:intergenic | 40.0% | |
| AACATTTCCTGGGGTAGAAA+TGG | - | chr8_3:51219514-51219533 | None:intergenic | 40.0% | |
| ATTTCTACCCCAGGAAATGT+TGG | + | chr8_3:51219513-51219532 | Msa1293760:CDS | 40.0% | |
| TTTCTACCCCAGGAAATGTT+GGG | + | chr8_3:51219514-51219533 | Msa1293760:CDS | 40.0% | |
| TGATTTCCCAACATTTCCTG+GGG | - | chr8_3:51219523-51219542 | None:intergenic | 40.0% | |
| CTGATTTCCCAACATTTCCT+GGG | - | chr8_3:51219524-51219543 | None:intergenic | 40.0% | |
| ! | ACTGATTTCCCAACATTTCC+TGG | - | chr8_3:51219525-51219544 | None:intergenic | 40.0% |
| ! | TTGGGAAATCAGTCTTGTCA+GGG | + | chr8_3:51219532-51219551 | Msa1293760:CDS | 40.0% |
| CATCTTGAATTACTGCGTAG+AGG | - | chr8_3:51218424-51218443 | None:intergenic | 40.0% | |
| ! | TTTTGCATAGCGAGATGGAT+GGG | - | chr8_3:51218596-51218615 | None:intergenic | 40.0% |
| !!! | TGTTGTTTTGCATAGCGAGA+TGG | - | chr8_3:51218601-51218620 | None:intergenic | 40.0% |
| CTCTTCCTCTAACTCTAACA+AGG | - | chr8_3:51218664-51218683 | None:intergenic | 40.0% | |
| GTTAGAGTTAGAGGAAGAGA+AGG | + | chr8_3:51218665-51218684 | Msa1293760:CDS | 40.0% | |
| ! | GTCAAGTACTCAATGGATTC+TGG | - | chr8_3:51218761-51218780 | None:intergenic | 40.0% |
| ! | CTCTTCAAGTACTTGTTAGC+TGG | + | chr8_3:51218834-51218853 | Msa1293760:CDS | 40.0% |
| TTAAACAGAAGGGATAAGGC+AGG | + | chr8_3:51218905-51218924 | Msa1293760:CDS | 40.0% | |
| !! | TATATAAGTTGGTAGGGGAG+GGG | - | chr8_3:51219036-51219055 | None:intergenic | 40.0% |
| AACACAGGCAGTTCTATTGT+TGG | + | chr8_3:51219131-51219150 | Msa1293760:intron | 40.0% | |
| ACACAGGCAGTTCTATTGTT+GGG | + | chr8_3:51219132-51219151 | Msa1293760:intron | 40.0% | |
| TAACCTGATAAATTCCACCG+GGG | - | chr8_3:51219449-51219468 | None:intergenic | 40.0% | |
| CTAACCTGATAAATTCCACC+GGG | - | chr8_3:51219450-51219469 | None:intergenic | 40.0% | |
| AACATTTCCTGGGGTAGAAA+TGG | - | chr8_3:51219514-51219533 | None:intergenic | 40.0% | |
| ATTTCTACCCCAGGAAATGT+TGG | + | chr8_3:51219513-51219532 | Msa1293760:CDS | 40.0% | |
| TTTCTACCCCAGGAAATGTT+GGG | + | chr8_3:51219514-51219533 | Msa1293760:CDS | 40.0% | |
| TGATTTCCCAACATTTCCTG+GGG | - | chr8_3:51219523-51219542 | None:intergenic | 40.0% | |
| CTGATTTCCCAACATTTCCT+GGG | - | chr8_3:51219524-51219543 | None:intergenic | 40.0% | |
| ! | ACTGATTTCCCAACATTTCC+TGG | - | chr8_3:51219525-51219544 | None:intergenic | 40.0% |
| ! | TTGGGAAATCAGTCTTGTCA+GGG | + | chr8_3:51219532-51219551 | Msa1293760:CDS | 40.0% |
| !! | GCTTTGAAGCTAAATCCGCA+AGG | + | chr8_3:51218563-51218582 | Msa1293760:CDS | 45.0% |
| TTTGCATAGCGAGATGGATG+GGG | - | chr8_3:51218595-51218614 | None:intergenic | 45.0% | |
| ! | GTTTTGCATAGCGAGATGGA+TGG | - | chr8_3:51218597-51218616 | None:intergenic | 45.0% |
| CCTCACAGTCAAGTACTCAA+TGG | - | chr8_3:51218768-51218787 | None:intergenic | 45.0% | |
| CCATTGAGTACTTGACTGTG+AGG | + | chr8_3:51218765-51218784 | Msa1293760:CDS | 45.0% | |
| AACCTGATAAATTCCACCGG+GGG | - | chr8_3:51219448-51219467 | None:intergenic | 45.0% | |
| ! | GTTGGGAAATCAGTCTTGTC+AGG | + | chr8_3:51219531-51219550 | Msa1293760:CDS | 45.0% |
| TCTCTAGTGGCTTCTCCAAT+GGG | + | chr8_3:51219648-51219667 | Msa1293760:intron | 45.0% | |
| !! | GCTTTGAAGCTAAATCCGCA+AGG | + | chr8_3:51218563-51218582 | Msa1293760:CDS | 45.0% |
| TTTGCATAGCGAGATGGATG+GGG | - | chr8_3:51218595-51218614 | None:intergenic | 45.0% | |
| ! | GTTTTGCATAGCGAGATGGA+TGG | - | chr8_3:51218597-51218616 | None:intergenic | 45.0% |
| CCTCACAGTCAAGTACTCAA+TGG | - | chr8_3:51218768-51218787 | None:intergenic | 45.0% | |
| CCATTGAGTACTTGACTGTG+AGG | + | chr8_3:51218765-51218784 | Msa1293760:CDS | 45.0% | |
| AACCTGATAAATTCCACCGG+GGG | - | chr8_3:51219448-51219467 | None:intergenic | 45.0% | |
| ! | GTTGGGAAATCAGTCTTGTC+AGG | + | chr8_3:51219531-51219550 | Msa1293760:CDS | 45.0% |
| TCTCTAGTGGCTTCTCCAAT+GGG | + | chr8_3:51219648-51219667 | Msa1293760:intron | 45.0% | |
| TTGAAAGCTGCAGCTGAAGC+AGG | + | chr8_3:51218386-51218405 | Msa1293760:CDS | 50.0% | |
| GGCAAAGTCGATATGACCCA+TGG | - | chr8_3:51218513-51218532 | None:intergenic | 50.0% | |
| AGCACTAAGTAGTGACCCAC+AGG | + | chr8_3:51218949-51218968 | Msa1293760:CDS | 50.0% | |
| CAGAGGAGCAACGTAACACT+TGG | + | chr8_3:51219370-51219389 | Msa1293760:CDS | 50.0% | |
| ACCTGATAAATTCCACCGGG+GGG | - | chr8_3:51219447-51219466 | None:intergenic | 50.0% | |
| CTCTCTAGTGGCTTCTCCAA+TGG | + | chr8_3:51219647-51219666 | Msa1293760:intron | 50.0% | |
| TTGAAAGCTGCAGCTGAAGC+AGG | + | chr8_3:51218386-51218405 | Msa1293760:CDS | 50.0% | |
| GGCAAAGTCGATATGACCCA+TGG | - | chr8_3:51218513-51218532 | None:intergenic | 50.0% | |
| AGCACTAAGTAGTGACCCAC+AGG | + | chr8_3:51218949-51218968 | Msa1293760:CDS | 50.0% | |
| CAGAGGAGCAACGTAACACT+TGG | + | chr8_3:51219370-51219389 | Msa1293760:CDS | 50.0% | |
| ACCTGATAAATTCCACCGGG+GGG | - | chr8_3:51219447-51219466 | None:intergenic | 50.0% | |
| CTCTCTAGTGGCTTCTCCAA+TGG | + | chr8_3:51219647-51219666 | Msa1293760:intron | 50.0% | |
| TGGATGGGGCTGAATCCTTG+CGG | - | chr8_3:51218581-51218600 | None:intergenic | 55.0% | |
| GCGAAGAGGGGCTAAAGATC+TGG | + | chr8_3:51218871-51218890 | Msa1293760:CDS | 55.0% | |
| !! | ATAAGTTGGTAGGGGAGGGG+AGG | - | chr8_3:51219033-51219052 | None:intergenic | 55.0% |
| ! | CAATCAGCATTGAGTCCCCC+CGG | + | chr8_3:51219429-51219448 | Msa1293760:CDS | 55.0% |
| TCCCCCCGGTGGAATTTATC+AGG | + | chr8_3:51219443-51219462 | Msa1293760:CDS | 55.0% | |
| TAGTGGCTTCTCCAATGGGC+TGG | + | chr8_3:51219652-51219671 | Msa1293760:intron | 55.0% | |
| CTAGCGGTAAACCAGCCCAT+TGG | - | chr8_3:51219666-51219685 | None:intergenic | 55.0% | |
| TGGATGGGGCTGAATCCTTG+CGG | - | chr8_3:51218581-51218600 | None:intergenic | 55.0% | |
| GCGAAGAGGGGCTAAAGATC+TGG | + | chr8_3:51218871-51218890 | Msa1293760:CDS | 55.0% | |
| !! | ATAAGTTGGTAGGGGAGGGG+AGG | - | chr8_3:51219033-51219052 | None:intergenic | 55.0% |
| ! | CAATCAGCATTGAGTCCCCC+CGG | + | chr8_3:51219429-51219448 | Msa1293760:CDS | 55.0% |
| TCCCCCCGGTGGAATTTATC+AGG | + | chr8_3:51219443-51219462 | Msa1293760:CDS | 55.0% | |
| TAGTGGCTTCTCCAATGGGC+TGG | + | chr8_3:51219652-51219671 | Msa1293760:intron | 55.0% | |
| CTAGCGGTAAACCAGCCCAT+TGG | - | chr8_3:51219666-51219685 | None:intergenic | 55.0% | |
| ! | TCAGCATTGAGTCCCCCCGG+TGG | + | chr8_3:51219432-51219451 | Msa1293760:CDS | 65.0% |
| ! | TCAGCATTGAGTCCCCCCGG+TGG | + | chr8_3:51219432-51219451 | Msa1293760:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 51218266 | 51219685 | 51218266 | ID=Msa1293760;Name=Msa1293760 |
| chr8_3 | mRNA | 51218266 | 51219685 | 51218266 | ID=Msa1293760-mRNA-1;Parent=Msa1293760;Name=Msa1293760-mRNA-1;_AED=0.11;_eAED=0.12;_QI=87|0.5|0.33|1|1|1|3|0|354 |
| chr8_3 | exon | 51218266 | 51218970 | 51218266 | ID=Msa1293760-mRNA-1:exon:14283;Parent=Msa1293760-mRNA-1 |
| chr8_3 | exon | 51219138 | 51219553 | 51219138 | ID=Msa1293760-mRNA-1:exon:14284;Parent=Msa1293760-mRNA-1 |
| chr8_3 | exon | 51219655 | 51219685 | 51219655 | ID=Msa1293760-mRNA-1:exon:14285;Parent=Msa1293760-mRNA-1 |
| chr8_3 | five_prime_UTR | 51218266 | 51218352 | 51218266 | ID=Msa1293760-mRNA-1:five_prime_utr;Parent=Msa1293760-mRNA-1 |
| chr8_3 | CDS | 51218353 | 51218970 | 51218353 | ID=Msa1293760-mRNA-1:cds;Parent=Msa1293760-mRNA-1 |
| chr8_3 | CDS | 51219138 | 51219553 | 51219138 | ID=Msa1293760-mRNA-1:cds;Parent=Msa1293760-mRNA-1 |
| chr8_3 | CDS | 51219655 | 51219685 | 51219655 | ID=Msa1293760-mRNA-1:cds;Parent=Msa1293760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
